Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:22:06 (218037): wrapper (7.7.26015): starting
15:22:06 (218037): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 15:22:06] Arguments: --nthreads 8
[2025-11-26 15:22:06] Threads: 8
[2025-11-26 15:22:06] Checking for CVMFS
[2025-11-26 15:22:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 15:22:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 15:22:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 15:22:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 15:22:09] 2.13.3.0 42195 30383 326968 153334 2 118 21675437 32935937 29439 16776704 0 177244914 99.778 105368068 33191 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 15:22:09] CVMFS is ok
[2025-11-26 15:22:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 15:22:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 15:22:09] Further information can be found at the LHC@home message board.
[2025-11-26 15:22:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 15:22:09] Checking for apptainer binary...
[2025-11-26 15:22:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 15:22:09] Running /usr/bin/apptainer --version
[2025-11-26 15:22:09] apptainer version 1.4.4-1.el9
[2025-11-26 15:22:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 15:22:10] c-6-3.aglt2.org
[2025-11-26 15:22:10] apptainer works
[2025-11-26 15:22:10] Set ATHENA_PROC_NUMBER=8
[2025-11-26 15:22:10] Set ATHENA_CORE_NUMBER=8
[2025-11-26 15:22:10] Starting ATLAS job with PandaID=6897487741
[2025-11-26 15:22:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:48:27]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:48:27] 2025-11-27 11:47:36,874 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:48:27] 2025-11-27 11:47:36,874 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:48:27] 2025-11-27 11:47:36,891 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:48:27] 2025-11-27 11:47:36,893 | INFO     | sum of square deviations: 232926758220.06107
[2025-11-27 06:48:27] 2025-11-27 11:47:36,913 | INFO     | sum of deviations: 1766303657105.6206
[2025-11-27 06:48:27] 2025-11-27 11:47:36,914 | INFO     | mean x: 1764216320.370737
[2025-11-27 06:48:27] 2025-11-27 11:47:36,914 | INFO     | mean y: 2943444.2563256323
[2025-11-27 06:48:27] 2025-11-27 11:47:36,914 | INFO     | intersect: -13375260770.702234
[2025-11-27 06:48:27] 2025-11-27 11:47:36,915 | INFO     | chi2: 8.391588081469761
[2025-11-27 06:48:27] 2025-11-27 11:47:36,916 | INFO     | sum of square deviations: 229105278686.80453
[2025-11-27 06:48:27] 2025-11-27 11:47:36,936 | INFO     | sum of deviations: 2088491210586.5178
[2025-11-27 06:48:27] 2025-11-27 11:47:36,936 | INFO     | mean x: 1764216167.8838496
[2025-11-27 06:48:27] 2025-11-27 11:47:36,936 | INFO     | mean y: 2956300.9668141594
[2025-11-27 06:48:27] 2025-11-27 11:47:36,937 | INFO     | intersect: -16079387944.08642
[2025-11-27 06:48:27] 2025-11-27 11:47:36,938 | INFO     | chi2: 4.980343400426577
[2025-11-27 06:48:27] 2025-11-27 11:47:36,938 | INFO     | current chi2=4.980343400426577 (change=40.65076416913109 %)
[2025-11-27 06:48:27] 2025-11-27 11:47:36,939 | INFO     | sum of square deviations: 225325846453.2325
[2025-11-27 06:48:27] 2025-11-27 11:47:36,958 | INFO     | sum of deviations: 2301765599777.834
[2025-11-27 06:48:27] 2025-11-27 11:47:36,959 | INFO     | mean x: 1764216015.3971078
[2025-11-27 06:48:27] 2025-11-27 11:47:36,959 | INFO     | mean y: 2964894.857619577
[2025-11-27 06:48:27] 2025-11-27 11:47:36,959 | INFO     | intersect: -18018987751.666782
[2025-11-27 06:48:27] 2025-11-27 11:47:36,960 | INFO     | chi2: 3.1305420563201154
[2025-11-27 06:48:27] 2025-11-27 11:47:36,960 | INFO     | current chi2=3.1305420563201154 (change=37.14204413992863 %)
[2025-11-27 06:48:27] 2025-11-27 11:47:36,961 | INFO     | sum of square deviations: 221587022770.3624
[2025-11-27 06:48:27] 2025-11-27 11:47:36,980 | INFO     | sum of deviations: 2314068219763.2495
[2025-11-27 06:48:27] 2025-11-27 11:47:36,981 | INFO     | mean x: 1764215862.885906
[2025-11-27 06:48:27] 2025-11-27 11:47:36,981 | INFO     | mean y: 2965392.884787472
[2025-11-27 06:48:27] 2025-11-27 11:47:36,981 | INFO     | intersect: -18421019053.791553
[2025-11-27 06:48:27] 2025-11-27 11:47:36,982 | INFO     | chi2: 3.034879476300082
[2025-11-27 06:48:27] 2025-11-27 11:47:36,982 | INFO     | current chi2=3.034879476300082 (change=3.055783257308562 %)
[2025-11-27 06:48:27] 2025-11-27 11:47:36,982 | INFO     | right removable region: 893
[2025-11-27 06:48:27] 2025-11-27 11:47:36,983 | INFO     | sum of square deviations: 229103964136.8044
[2025-11-27 06:48:27] 2025-11-27 11:47:37,003 | INFO     | sum of deviations: 1462251333316.0215
[2025-11-27 06:48:27] 2025-11-27 11:47:37,003 | INFO     | mean x: 1764216472.8838496
[2025-11-27 06:48:27] 2025-11-27 11:47:37,003 | INFO     | mean y: 2955566.6382743362
[2025-11-27 06:48:27] 2025-11-27 11:47:37,004 | INFO     | intersect: -11257119742.194311
[2025-11-27 06:48:27] 2025-11-27 11:47:37,005 | INFO     | chi2: 5.639424915846768
[2025-11-27 06:48:27] 2025-11-27 11:47:37,005 | INFO     | current chi2=5.639424915846768 (change=32.796690434559075 %)
[2025-11-27 06:48:27] 2025-11-27 11:47:37,006 | INFO     | sum of square deviations: 225323438066.3912
[2025-11-27 06:48:27] 2025-11-27 11:47:37,026 | INFO     | sum of deviations: 1396999660259.7385
[2025-11-27 06:48:27] 2025-11-27 11:47:37,026 | INFO     | mean x: 1764216625.3926585
[2025-11-27 06:48:27] 2025-11-27 11:47:37,026 | INFO     | mean y: 2958198.35483871
[2025-11-27 06:48:27] 2025-11-27 11:47:37,026 | INFO     | intersect: -10935140596.196363
[2025-11-27 06:48:27] 2025-11-27 11:47:37,027 | INFO     | chi2: 5.593167931382502
[2025-11-27 06:48:27] 2025-11-27 11:47:37,028 | INFO     | current chi2=5.593167931382502 (change=0.8202429353086019 %)
[2025-11-27 06:48:27] 2025-11-27 11:47:37,028 | INFO     | left removable region: 20
[2025-11-27 06:48:27] 2025-11-27 11:47:37,029 | INFO     | sum of square deviations: 206335818656.3937
[2025-11-27 06:48:27] 2025-11-27 11:47:37,048 | INFO     | sum of deviations: 1852772570980.5388
[2025-11-27 06:48:27] 2025-11-27 11:47:37,049 | INFO     | mean x: 1764216442.4180984
[2025-11-27 06:48:27] 2025-11-27 11:47:37,049 | INFO     | mean y: 2984174.902634593
[2025-11-27 06:48:27] 2025-11-27 11:47:37,049 | INFO     | intersect: -15838627112.318407
[2025-11-27 06:48:27] 2025-11-27 11:47:37,050 | INFO     | chi2: 0.18042037933100422
[2025-11-27 06:48:27] 2025-11-27 11:47:37,050 | INFO     | current memory leak: 8.98 B/s (using 873 data points, chi2=0.18)
[2025-11-27 06:48:27] 2025-11-27 11:47:37,051 | INFO     | could have reported an average CPU frequency of 2600 MHz (34 samples)
[2025-11-27 06:48:27] 2025-11-27 11:47:37,051 | INFO     | ..............................
[2025-11-27 06:48:27] 2025-11-27 11:47:37,051 | INFO     | . Timing measurements:
[2025-11-27 06:48:27] 2025-11-27 11:47:37,052 | INFO     | . get job = 0 s
[2025-11-27 06:48:27] 2025-11-27 11:47:37,052 | INFO     | . initial setup = 4 s
[2025-11-27 06:48:27] 2025-11-27 11:47:37,052 | INFO     | . payload setup = 13 s
[2025-11-27 06:48:27] 2025-11-27 11:47:37,052 | INFO     | . stage-in = 0 s
[2025-11-27 06:48:27] 2025-11-27 11:47:37,052 | INFO     | . payload execution = 55424 s
[2025-11-27 06:48:27] 2025-11-27 11:47:37,052 | INFO     | . stage-out = 4 s
[2025-11-27 06:48:27] 2025-11-27 11:47:37,052 | INFO     | . log creation = 0 s
[2025-11-27 06:48:27] 2025-11-27 11:47:37,052 | INFO     | ..............................
[2025-11-27 06:48:27] 2025-11-27 11:47:37,260 | INFO     | 
[2025-11-27 06:48:27] 2025-11-27 11:47:37,260 | INFO     | job summary report
[2025-11-27 06:48:27] 2025-11-27 11:47:37,261 | INFO     | --------------------------------------------------
[2025-11-27 06:48:27] 2025-11-27 11:47:37,261 | INFO     | PanDA job id: 6897487741
[2025-11-27 06:48:27] 2025-11-27 11:47:37,261 | INFO     | task id: 47556161
[2025-11-27 06:48:27] 2025-11-27 11:47:37,261 | INFO     | errors: (none)
[2025-11-27 06:48:27] 2025-11-27 11:47:37,261 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:48:27] 2025-11-27 11:47:37,261 | INFO     | pilot state: finished 
[2025-11-27 06:48:27] 2025-11-27 11:47:37,261 | INFO     | transexitcode: 0
[2025-11-27 06:48:27] 2025-11-27 11:47:37,262 | INFO     | exeerrorcode: 0
[2025-11-27 06:48:27] 2025-11-27 11:47:37,262 | INFO     | exeerrordiag: 
[2025-11-27 06:48:27] 2025-11-27 11:47:37,262 | INFO     | exitcode: 0
[2025-11-27 06:48:27] 2025-11-27 11:47:37,262 | INFO     | exitmsg: OK
[2025-11-27 06:48:27] 2025-11-27 11:47:37,262 | INFO     | cpuconsumptiontime: 296570 s
[2025-11-27 06:48:27] 2025-11-27 11:47:37,262 | INFO     | nevents: 1000
[2025-11-27 06:48:27] 2025-11-27 11:47:37,262 | INFO     | neventsw: 0
[2025-11-27 06:48:27] 2025-11-27 11:47:37,262 | INFO     | pid: 235441
[2025-11-27 06:48:27] 2025-11-27 11:47:37,262 | INFO     | pgrp: 235441
[2025-11-27 06:48:27] 2025-11-27 11:47:37,263 | INFO     | corecount: 8
[2025-11-27 06:48:27] 2025-11-27 11:47:37,263 | INFO     | event service: False
[2025-11-27 06:48:27] 2025-11-27 11:47:37,263 | INFO     | sizes: {0: 2284038, 1: 2284122, 2: 2284321, 13: 2284321, 17: 2284639, 24: 2284667, 55441: 2336489, 55448: 2345539, 55458: 2345729}
[2025-11-27 06:48:27] 2025-11-27 11:47:37,263 | INFO     | --------------------------------------------------
[2025-11-27 06:48:27] 2025-11-27 11:47:37,263 | INFO     | 
[2025-11-27 06:48:27] 2025-11-27 11:47:37,263 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 06:48:27] 2025-11-27 11:47:37,294 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,295 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,295 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,295 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,295 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,296 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,296 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,297 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:48:27] 2025-11-27 11:47:37,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,297 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:48:27] 2025-11-27 11:47:37,297 | INFO     | job 6897487741 has completed (purged errors)
[2025-11-27 06:48:27] 2025-11-27 11:47:37,297 | INFO     | overall cleanup function is called
[2025-11-27 06:48:27] 2025-11-27 11:47:38,317 | INFO     | --- collectZombieJob: --- 10, [235441]
[2025-11-27 06:48:27] 2025-11-27 11:47:38,317 | INFO     | zombie collector waiting for pid 235441
[2025-11-27 06:48:27] 2025-11-27 11:47:38,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:48:27] 2025-11-27 11:47:38,317 | INFO     | collected zombie processes
[2025-11-27 06:48:27] 2025-11-27 11:47:38,317 | INFO     | will attempt to kill all subprocesses of pid=235441
[2025-11-27 06:48:27] 2025-11-27 11:47:38,809 | INFO     | process IDs to be killed: [235441] (in reverse order)
[2025-11-27 06:48:27] 2025-11-27 11:47:39,074 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:48:27] 2025-11-27 11:47:39,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:48:27] 2025-11-27 11:47:39,092 | INFO     | did not find any defunct processes belonging to 235441
[2025-11-27 06:48:27] 2025-11-27 11:47:39,110 | INFO     | did not find any defunct processes belonging to 235441
[2025-11-27 06:48:27] 2025-11-27 11:47:39,111 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:48:27] 2025-11-27 11:47:39,111 | INFO     | ready for new job
[2025-11-27 06:48:27] 2025-11-27 11:47:39,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:48:27] 2025-11-27 11:47:39,116 | INFO     | ***************************************
[2025-11-27 06:48:27] 2025-11-27 11:47:39,116 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:48:27] 2025-11-27 11:47:39,116 | INFO     | ***************************************
[2025-11-27 06:48:27] 2025-11-27 11:47:39,116 | INFO     | 
[2025-11-27 06:48:27] 2025-11-27 11:47:39,118 | INFO     | architecture information:
[2025-11-27 06:48:27] 2025-11-27 11:47:39,128 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:48:27] 2025-11-27 11:47:39,283 | INFO     | cat /etc/os-release:
[2025-11-27 06:48:27] NAME="CentOS Linux"
[2025-11-27 06:48:27] VERSION="7 (Core)"
[2025-11-27 06:48:27] ID="centos"
[2025-11-27 06:48:27] ID_LIKE="rhel fedora"
[2025-11-27 06:48:27] VERSION_ID="7"
[2025-11-27 06:48:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:48:27] ANSI_COLOR="0;31"
[2025-11-27 06:48:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:48:27] HOME_URL="https://www.centos.org/"
[2025-11-27 06:48:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:48:27] 
[2025-11-27 06:48:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:48:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:48:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:48:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:48:27] 
[2025-11-27 06:48:27] 2025-11-27 11:47:39,283 | INFO     | ***************************************
[2025-11-27 06:48:27] 2025-11-27 11:47:39,787 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 06:48:27] 2025-11-27 11:47:39,811 | INFO     | sufficient remaining disk space (72193409024 B)
[2025-11-27 06:48:27] 2025-11-27 11:47:39,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:48:27] 2025-11-27 11:47:39,811 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:48:27] 2025-11-27 11:47:39,812 | INFO     | update_server=False
[2025-11-27 06:48:27] 2025-11-27 11:47:39,812 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:48:27] 2025-11-27 11:47:39,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:48:27] 2025-11-27 11:47:40,007 | INFO     | all data control threads have been joined
[2025-11-27 06:48:27] 2025-11-27 11:47:40,245 | INFO     | all payload control threads have been joined
[2025-11-27 06:48:27] 2025-11-27 11:47:40,265 | INFO     | all job control threads have been joined
[2025-11-27 06:48:27] 2025-11-27 11:47:40,381 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:48:27] 2025-11-27 11:47:40,381 | INFO     | aborting loop
[2025-11-27 06:48:27] 2025-11-27 11:47:40,820 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:40,880 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:41,012 | INFO     | [data] control thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:41,266 | INFO     | [payload] control thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:41,271 | INFO     | [job] control thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:41,305 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:41,386 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:41,388 | INFO     | [job] validate thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:41,466 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:41,837 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:41,892 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:41,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:48:27] 2025-11-27 11:47:42,049 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:42,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:48:27] 2025-11-27 11:47:42,194 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:42,285 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:43,174 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:47:45,943 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:48:27] 2025-11-27 11:48:10,236 | INFO     | PID=224303 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 06:48:27] 2025-11-27 11:48:10,237 | INFO     | .. there are 39 such processes running
[2025-11-27 06:48:27] 2025-11-27 11:48:10,237 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:48:27] 2025-11-27 11:48:10,237 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:48:27] 2025-11-27 11:48:10,237 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:48:27] 2025-11-27 11:48:21,185 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:48:27] 2025-11-27 11:48:21,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140423308359488)>', '<ExcThread(monitor, started 140422504490752)>']
[2025-11-27 06:48:27] 2025-11-27 11:48:22,335 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:48:27] 2025-11-27 11:48:22,335 | INFO     | [monitor] control thread has ended
[2025-11-27 06:48:27] 2025-11-27 11:48:26,600 | INFO     | all workflow threads have been joined
[2025-11-27 06:48:27] 2025-11-27 11:48:26,600 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:48:27] 2025-11-27 11:48:26,600 | INFO     | traces error code: 0
[2025-11-27 06:48:27] 2025-11-27 11:48:26,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:48:27] 2025-11-27 11:48:26,913 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:48:27] 2025-11-27 11:48:26,927 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:48:27] 2025-11-27 11:48:26,968 [wrapper] pilotpid: 224303
[2025-11-27 06:48:27] 2025-11-27 11:48:26,977 [wrapper] Pilot exit status: 0
[2025-11-27 06:48:27] 2025-11-27 11:48:27,035 [wrapper] pandaids: 6897487741
[2025-11-27 06:48:27] 2025-11-27 11:48:27,152 [wrapper] cleanup supervisor_pilot 3576166 224304
[2025-11-27 06:48:27] 2025-11-27 11:48:27,163 [wrapper] Test setup, not cleaning
[2025-11-27 06:48:27] 2025-11-27 11:48:27,181 [wrapper] apfmon messages muted
[2025-11-27 06:48:27] 2025-11-27 11:48:27,200 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:48:27] 2025-11-27 11:48:27,215 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:48:27]  *** Error codes and diagnostics ***
[2025-11-27 06:48:27]     "exeErrorCode": 0,
[2025-11-27 06:48:27]     "exeErrorDiag": "",
[2025-11-27 06:48:27]     "pilotErrorCode": 0,
[2025-11-27 06:48:27]     "pilotErrorDiag": "",
[2025-11-27 06:48:27]  *** Listing of results directory ***
[2025-11-27 06:48:27] total 1316140
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 06:48:27] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas       100 Nov 26 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:48:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 15:22 run_atlas
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas       105 Nov 26 15:22 job.xml
[2025-11-27 06:48:27] -rw-r--r--. 2 boincer umatlas 407481119 Nov 26 15:22 EVNT.47483658._002251.pool.root.1
[2025-11-27 06:48:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 15:22 start_atlas.sh
[2025-11-27 06:48:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 15:22 shared
[2025-11-27 06:48:27] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 15:22 input.tar.gz
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas         0 Nov 26 15:22 boinc_lockfile
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 15:22 pandaJob.out
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas        57 Nov 26 15:22 setup.sh.local
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas    991538 Nov 26 15:22 agis_schedconf.cvmfs.json
[2025-11-27 06:48:27] drwx------. 5 boincer umatlas      4096 Nov 26 15:22 pilot3
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas       533 Nov 27 06:33 boinc_task_state.xml
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas      6657 Nov 27 06:46 init_data.xml
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas 917659772 Nov 27 06:46 HITS.47556161._002347.pool.root.1
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas      1072 Nov 27 06:47 memory_monitor_summary.json
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas   1516240 Nov 27 06:47 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas   2090022 Nov 27 06:47 log.47556161._002347.job.log.tgz.1
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas        95 Nov 27 06:47 pilot_heartbeat.json
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas      8659 Nov 27 06:47 heartbeat.json
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 06:48 boinc_mmap_file
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas        29 Nov 27 06:48 wrapper_checkpoint.txt
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas      4823 Nov 27 06:48 pilotlog.txt
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas   7240663 Nov 27 06:48 log.47556161._002347.job.log.1
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas       353 Nov 27 06:48 output.list
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas       620 Nov 27 06:48 runtime_log
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas   9349120 Nov 27 06:48 result.tar.gz
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas      9328 Nov 27 06:48 runtime_log.err
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas       662 Nov 27 06:48 j7QMDmGXBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1bJKDma2wQLn.diag
[2025-11-27 06:48:27] -rw-r--r--. 1 boincer umatlas     21130 Nov 27 06:48 stderr.txt
[2025-11-27 06:48:27] HITS file was successfully produced:
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas 917659772 Nov 27 06:46 shared/HITS.pool.root.1
[2025-11-27 06:48:27]  *** Contents of shared directory: ***
[2025-11-27 06:48:27] total 1303824
[2025-11-27 06:48:27] -rw-r--r--. 2 boincer umatlas 407481119 Nov 26 15:22 ATLAS.root_0
[2025-11-27 06:48:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 15:22 start_atlas.sh
[2025-11-27 06:48:27] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 15:22 input.tar.gz
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas 917659772 Nov 27 06:46 HITS.pool.root.1
[2025-11-27 06:48:27] -rw-------. 1 boincer umatlas   9349120 Nov 27 06:48 result.tar.gz
06:48:29 (218037): run_atlas exited; CPU time 298472.363431
06:48:29 (218037): called boinc_finish(0)

</stderr_txt>
]]>

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