Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:31:33 (2547933): wrapper (7.7.26015): starting
13:31:33 (2547933): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 13:31:33] Arguments: --nthreads 8
[2025-11-26 13:31:33] Threads: 8
[2025-11-26 13:31:33] Checking for CVMFS
[2025-11-26 13:31:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:31:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:31:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:31:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:31:34] 2.13.2.0 3460 2909 59744 153334 2 81 3173093 4096001 4140 130560 0 6898699 99.761 1340484 895 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 13:31:34] CVMFS is ok
[2025-11-26 13:31:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:31:34] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 13:31:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 13:31:34] Further information can be found at the LHC@home message board.
[2025-11-26 13:31:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:31:34] Checking for apptainer binary...
[2025-11-26 13:31:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:31:34] Running /usr/bin/apptainer --version
[2025-11-26 13:31:34] apptainer version 1.4.3
[2025-11-26 13:31:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:31:34] painter
[2025-11-26 13:31:34] apptainer works
[2025-11-26 13:31:34] Set ATHENA_PROC_NUMBER=8
[2025-11-26 13:31:34] Set ATHENA_CORE_NUMBER=8
[2025-11-26 13:31:34] Starting ATLAS job with PandaID=6897394681
[2025-11-26 13:31:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:39:10]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:39:10] 2025-11-27 00:38:39,982 | INFO     | monitor loop #1112: job 0:6897394681 is in state 'finished'
[2025-11-26 17:39:10] 2025-11-27 00:38:39,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:39:10] 2025-11-27 00:38:40,221 | INFO     | time since job start (14819s) is within the limit (172800.0s)
[2025-11-26 17:39:10] 2025-11-27 00:38:41,925 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 17:39:10] 2025-11-27 00:38:41,928 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4714.6164687499995
[2025-11-26 17:39:10] 2025-11-27 00:38:41,931 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6897394681/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:39:10] 2025-11-27 00:38:41,931 | INFO     | extracted standard info from prmon json
[2025-11-26 17:39:10] 2025-11-27 00:38:41,931 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:39:10] 2025-11-27 00:38:41,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:39:10] 2025-11-27 00:38:41,933 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:39:10] 2025-11-27 00:38:41,934 | INFO     | sum of square deviations: 4449293166.946507
[2025-11-26 17:39:10] 2025-11-27 00:38:41,934 | INFO     | sum of deviations: 62302071828.41976
[2025-11-26 17:39:10] 2025-11-27 00:38:41,934 | INFO     | mean x: 1764196501.0658436
[2025-11-26 17:39:10] 2025-11-27 00:38:41,934 | INFO     | mean y: 2860779.098765432
[2025-11-26 17:39:10] 2025-11-27 00:38:41,934 | INFO     | intersect: -24700635485.29393
[2025-11-26 17:39:10] 2025-11-27 00:38:41,935 | INFO     | chi2: 4.036385693776216
[2025-11-26 17:39:10] 2025-11-27 00:38:41,935 | INFO     | sum of square deviations: 4180260444.4243712
[2025-11-26 17:39:10] 2025-11-27 00:38:41,936 | INFO     | sum of deviations: 118817895637.56723
[2025-11-26 17:39:10] 2025-11-27 00:38:41,936 | INFO     | mean x: 1764196348.567227
[2025-11-26 17:39:10] 2025-11-27 00:38:41,936 | INFO     | mean y: 2892630.995798319
[2025-11-26 17:39:10] 2025-11-27 00:38:41,936 | INFO     | intersect: -50141853232.34543
[2025-11-26 17:39:10] 2025-11-27 00:38:41,936 | INFO     | chi2: 1.894920463500837
[2025-11-26 17:39:10] 2025-11-27 00:38:41,936 | INFO     | current chi2=1.894920463500837 (change=53.05402884509643 %)
[2025-11-26 17:39:10] 2025-11-27 00:38:41,936 | INFO     | sum of square deviations: 3922297696.901275
[2025-11-26 17:39:10] 2025-11-27 00:38:41,937 | INFO     | sum of deviations: 114098084901.08583
[2025-11-26 17:39:10] 2025-11-27 00:38:41,937 | INFO     | mean x: 1764196196.0686696
[2025-11-26 17:39:10] 2025-11-27 00:38:41,937 | INFO     | mean y: 2889840.244635193
[2025-11-26 17:39:10] 2025-11-27 00:38:41,937 | INFO     | intersect: -51316878039.751205
[2025-11-26 17:39:10] 2025-11-27 00:38:41,937 | INFO     | chi2: 1.8954234526670837
[2025-11-26 17:39:10] 2025-11-27 00:38:41,937 | INFO     | current chi2=1.8954234526670837 (change=-0.026544078019898915 %)
[2025-11-26 17:39:10] 2025-11-27 00:38:41,937 | INFO     | right removable region: 232
[2025-11-26 17:39:10] 2025-11-27 00:38:41,937 | INFO     | sum of square deviations: 4180250684.4243712
[2025-11-26 17:39:10] 2025-11-27 00:38:41,938 | INFO     | sum of deviations: 8010923575.361336
[2025-11-26 17:39:10] 2025-11-27 00:38:41,938 | INFO     | mean x: 1764196653.567227
[2025-11-26 17:39:10] 2025-11-27 00:38:41,938 | INFO     | mean y: 2891331.7899159663
[2025-11-26 17:39:10] 2025-11-27 00:38:41,938 | INFO     | intersect: -3377969202.7934046
[2025-11-26 17:39:10] 2025-11-27 00:38:41,938 | INFO     | chi2: 2.224814676804769
[2025-11-26 17:39:10] 2025-11-27 00:38:41,938 | INFO     | current chi2=2.224814676804769 (change=44.881018673828535 %)
[2025-11-26 17:39:10] 2025-11-27 00:38:41,938 | INFO     | sum of square deviations: 3922278176.901275
[2025-11-26 17:39:10] 2025-11-27 00:38:41,939 | INFO     | sum of deviations: 2003394773.2789707
[2025-11-26 17:39:10] 2025-11-27 00:38:41,939 | INFO     | mean x: 1764196806.0686696
[2025-11-26 17:39:10] 2025-11-27 00:38:41,939 | INFO     | mean y: 2894872.5450643776
[2025-11-26 17:39:10] 2025-11-27 00:38:41,939 | INFO     | intersect: -898209664.3865058
[2025-11-26 17:39:10] 2025-11-27 00:38:41,939 | INFO     | chi2: 2.217846196497514
[2025-11-26 17:39:10] 2025-11-27 00:38:41,939 | INFO     | current chi2=2.217846196497514 (change=0.3132162143618598 %)
[2025-11-26 17:39:10] 2025-11-27 00:38:41,939 | INFO     | left removable region: 20
[2025-11-26 17:39:10] 2025-11-27 00:38:41,939 | INFO     | sum of square deviations: 2954478344.075466
[2025-11-26 17:39:10] 2025-11-27 00:38:41,940 | INFO     | sum of deviations: 46519386398.01885
[2025-11-26 17:39:10] 2025-11-27 00:38:41,940 | INFO     | mean x: 1764196775.5660377
[2025-11-26 17:39:10] 2025-11-27 00:38:41,940 | INFO     | mean y: 2931187.3915094337
[2025-11-26 17:39:10] 2025-11-27 00:38:41,940 | INFO     | intersect: -27775018733.70602
[2025-11-26 17:39:10] 2025-11-27 00:38:41,940 | INFO     | chi2: 0.02645782396394679
[2025-11-26 17:39:10] 2025-11-27 00:38:41,940 | INFO     | current memory leak: 15.75 B/s (using 212 data points, chi2=0.03)
[2025-11-26 17:39:10] 2025-11-27 00:38:41,940 | INFO     | could have reported an average CPU frequency of 4673 MHz (12 samples)
[2025-11-26 17:39:10] 2025-11-27 00:38:41,941 | INFO     | ..............................
[2025-11-26 17:39:10] 2025-11-27 00:38:41,941 | INFO     | . Timing measurements:
[2025-11-26 17:39:10] 2025-11-27 00:38:41,941 | INFO     | . get job = 0 s
[2025-11-26 17:39:10] 2025-11-27 00:38:41,941 | INFO     | . initial setup = 2 s
[2025-11-26 17:39:10] 2025-11-27 00:38:41,941 | INFO     | . payload setup = 2 s
[2025-11-26 17:39:10] 2025-11-27 00:38:41,941 | INFO     | . stage-in = 0 s
[2025-11-26 17:39:10] 2025-11-27 00:38:41,941 | INFO     | . payload execution = 14793 s
[2025-11-26 17:39:10] 2025-11-27 00:38:41,941 | INFO     | . stage-out = 2 s
[2025-11-26 17:39:10] 2025-11-27 00:38:41,941 | INFO     | . log creation = 0 s
[2025-11-26 17:39:10] 2025-11-27 00:38:41,941 | INFO     | ..............................
[2025-11-26 17:39:10] 2025-11-27 00:38:42,226 | INFO     | time since job start (14821s) is within the limit (172800.0s)
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | 
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | job summary report
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | --------------------------------------------------
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | PanDA job id: 6897394681
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | task id: 47556161
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | errors: (none)
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | pilot state: finished 
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | transexitcode: 0
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | exeerrorcode: 0
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | exeerrordiag: 
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | exitcode: 0
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | exitmsg: OK
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | cpuconsumptiontime: 105880 s
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | nevents: 1000
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | neventsw: 0
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | pid: 2558445
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | pgrp: 2558445
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | corecount: 8
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | event service: False
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | sizes: {0: 2284272, 2: 2284534, 11: 2284562, 14799: 2316597, 14802: 2325661, 14807: 2325851}
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | --------------------------------------------------
[2025-11-26 17:39:10] 2025-11-27 00:38:42,368 | INFO     | 
[2025-11-26 17:39:10] 2025-11-27 00:38:42,369 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | job 6897394681 has completed (purged errors)
[2025-11-26 17:39:10] 2025-11-27 00:38:42,381 | INFO     | overall cleanup function is called
[2025-11-26 17:39:10] 2025-11-27 00:38:43,394 | INFO     | --- collectZombieJob: --- 10, [2558445]
[2025-11-26 17:39:10] 2025-11-27 00:38:43,394 | INFO     | zombie collector waiting for pid 2558445
[2025-11-26 17:39:10] 2025-11-27 00:38:43,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:39:10] 2025-11-27 00:38:43,394 | INFO     | collected zombie processes
[2025-11-26 17:39:10] 2025-11-27 00:38:43,394 | INFO     | will attempt to kill all subprocesses of pid=2558445
[2025-11-26 17:39:10] 2025-11-27 00:38:43,473 | INFO     | process IDs to be killed: [2558445] (in reverse order)
[2025-11-26 17:39:10] 2025-11-27 00:38:43,511 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:39:10] 2025-11-27 00:38:43,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:39:10] 2025-11-27 00:38:43,514 | INFO     | did not find any defunct processes belonging to 2558445
[2025-11-26 17:39:10] 2025-11-27 00:38:43,516 | INFO     | did not find any defunct processes belonging to 2558445
[2025-11-26 17:39:10] 2025-11-27 00:38:43,517 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:39:10] 2025-11-27 00:38:43,517 | INFO     | ready for new job
[2025-11-26 17:39:10] 2025-11-27 00:38:43,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:39:10] 2025-11-27 00:38:43,519 | INFO     | ***************************************
[2025-11-26 17:39:10] 2025-11-27 00:38:43,519 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:39:10] 2025-11-27 00:38:43,519 | INFO     | ***************************************
[2025-11-26 17:39:10] 2025-11-27 00:38:43,519 | INFO     | 
[2025-11-26 17:39:10] 2025-11-27 00:38:43,520 | INFO     | architecture information:
[2025-11-26 17:39:10] 2025-11-27 00:38:43,520 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:39:10] 2025-11-27 00:38:43,531 | INFO     | cat /etc/os-release:
[2025-11-26 17:39:10] NAME="CentOS Linux"
[2025-11-26 17:39:10] VERSION="7 (Core)"
[2025-11-26 17:39:10] ID="centos"
[2025-11-26 17:39:10] ID_LIKE="rhel fedora"
[2025-11-26 17:39:10] VERSION_ID="7"
[2025-11-26 17:39:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:39:10] ANSI_COLOR="0;31"
[2025-11-26 17:39:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:39:10] HOME_URL="https://www.centos.org/"
[2025-11-26 17:39:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:39:10] 
[2025-11-26 17:39:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:39:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:39:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:39:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:39:10] 
[2025-11-26 17:39:10] 2025-11-27 00:38:43,531 | INFO     | ***************************************
[2025-11-26 17:39:10] 2025-11-27 00:38:44,034 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-26 17:39:10] 2025-11-27 00:38:44,044 | INFO     | sufficient remaining disk space (198549962752 B)
[2025-11-26 17:39:10] 2025-11-27 00:38:44,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:39:10] 2025-11-27 00:38:44,044 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:39:10] 2025-11-27 00:38:44,044 | INFO     | update_server=False
[2025-11-26 17:39:10] 2025-11-27 00:38:44,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:39:10] 2025-11-27 00:38:44,044 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 17:39:10] 2025-11-27 00:38:44,044 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:39:10] 2025-11-27 00:38:44,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:39:10] 2025-11-27 00:38:44,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:39:10] 2025-11-27 00:38:44,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:39:10] 2025-11-27 00:38:44,044 | INFO     | aborting loop
[2025-11-26 17:39:10] 2025-11-27 00:38:44,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:39:10] 2025-11-27 00:38:44,945 | INFO     | all data control threads have been joined
[2025-11-26 17:39:10] 2025-11-27 00:38:45,048 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:45,049 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:45,086 | INFO     | all payload control threads have been joined
[2025-11-26 17:39:10] 2025-11-27 00:38:45,162 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:45,221 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:45,573 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:45,691 | INFO     | all job control threads have been joined
[2025-11-26 17:39:10] 2025-11-27 00:38:45,908 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:45,950 | INFO     | [data] control thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:46,001 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:46,091 | INFO     | [payload] control thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:46,454 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:46,464 | INFO     | [job] validate thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:46,546 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:46,692 | INFO     | [job] control thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:46,716 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:46,995 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:39:10] 2025-11-27 00:38:47,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:39:10] 2025-11-27 00:38:48,000 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:38:51,476 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:39:10] 2025-11-27 00:39:05,299 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:39:10] 2025-11-27 00:39:05,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139183055931200)>', '<ExcThread(monitor, started 139182416578304)>']
[2025-11-26 17:39:10] 2025-11-27 00:39:06,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:39:10] 2025-11-27 00:39:06,144 | INFO     | [monitor] control thread has ended
[2025-11-26 17:39:10] 2025-11-27 00:39:10,751 | INFO     | all workflow threads have been joined
[2025-11-26 17:39:10] 2025-11-27 00:39:10,752 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:39:10] 2025-11-27 00:39:10,752 | INFO     | traces error code: 0
[2025-11-26 17:39:10] 2025-11-27 00:39:10,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:39:10] 2025-11-27 00:39:10,813 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:39:10] 2025-11-27 00:39:10,815 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:39:10] 2025-11-27 00:39:10,816 [wrapper] pilotpid: 2551783
[2025-11-26 17:39:10] 2025-11-27 00:39:10,817 [wrapper] Pilot exit status: 0
[2025-11-26 17:39:10] 2025-11-27 00:39:10,823 [wrapper] pandaids: 6897394681
[2025-11-26 17:39:10] 2025-11-27 00:39:10,848 [wrapper] cleanup supervisor_pilot 2746477 2551784
[2025-11-26 17:39:10] 2025-11-27 00:39:10,850 [wrapper] Test setup, not cleaning
[2025-11-26 17:39:10] 2025-11-27 00:39:10,852 [wrapper] apfmon messages muted
[2025-11-26 17:39:10] 2025-11-27 00:39:10,853 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:39:10] 2025-11-27 00:39:10,855 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:39:10]  *** Error codes and diagnostics ***
[2025-11-26 17:39:10]     "exeErrorCode": 0,
[2025-11-26 17:39:10]     "exeErrorDiag": "",
[2025-11-26 17:39:10]     "pilotErrorCode": 0,
[2025-11-26 17:39:10]     "pilotErrorDiag": "",
[2025-11-26 17:39:10]  *** Listing of results directory ***
[2025-11-26 17:39:10] total 1298824
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc    576529 Nov 25 09:48 pilot3.tar.gz
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc      5112 Nov 25 09:55 queuedata.json
[2025-11-26 17:39:10] -rwx------ 1 boinc boinc     36292 Nov 25 09:57 runpilot2-wrapper.sh
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc       100 Nov 26 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:39:10] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 13:31 run_atlas
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc       105 Nov 26 13:31 job.xml
[2025-11-26 17:39:10] -rw-r--r-- 2 boinc boinc     15847 Nov 26 13:31 start_atlas.sh
[2025-11-26 17:39:10] drwxrwx--x 2 boinc boinc      4096 Nov 26 13:31 shared
[2025-11-26 17:39:10] -rw-r--r-- 2 boinc boinc    590109 Nov 26 13:31 input.tar.gz
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc      9935 Nov 26 13:31 init_data.xml
[2025-11-26 17:39:10] -rw-r--r-- 2 boinc boinc 407841040 Nov 26 13:31 EVNT.47483658._002230.pool.root.1
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc         0 Nov 26 13:31 boinc_lockfile
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc      2786 Nov 26 13:31 pandaJob.out
[2025-11-26 17:39:10] -rw------- 1 boinc boinc    991538 Nov 26 13:31 agis_schedconf.cvmfs.json
[2025-11-26 17:39:10] drwx------ 5 boinc boinc      4096 Nov 26 13:31 pilot3
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc       532 Nov 26 17:34 boinc_task_state.xml
[2025-11-26 17:39:10] -rw------- 1 boinc boinc        95 Nov 26 17:38 pilot_heartbeat.json
[2025-11-26 17:39:10] -rw------- 1 boinc boinc 910793211 Nov 26 17:38 HITS.47556161._002140.pool.root.1
[2025-11-26 17:39:10] -rw------- 1 boinc boinc      1038 Nov 26 17:38 memory_monitor_summary.json
[2025-11-26 17:39:10] -rw------- 1 boinc boinc   1516240 Nov 26 17:38 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:39:10] -rw------- 1 boinc boinc   1556141 Nov 26 17:38 log.47556161._002140.job.log.tgz.1
[2025-11-26 17:39:10] -rw------- 1 boinc boinc      8552 Nov 26 17:38 heartbeat.json
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc      8192 Nov 26 17:38 boinc_mmap_file
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc        29 Nov 26 17:39 wrapper_checkpoint.txt
[2025-11-26 17:39:10] -rw------- 1 boinc boinc      4560 Nov 26 17:39 pilotlog.txt
[2025-11-26 17:39:10] -rw------- 1 boinc boinc   2162844 Nov 26 17:39 log.47556161._002140.job.log.1
[2025-11-26 17:39:10] -rw------- 1 boinc boinc       353 Nov 26 17:39 output.list
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc       620 Nov 26 17:39 runtime_log
[2025-11-26 17:39:10] -rw------- 1 boinc boinc   3737600 Nov 26 17:39 result.tar.gz
[2025-11-26 17:39:10] -rw------- 1 boinc boinc       662 Nov 26 17:39 TulMDmDXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeVMKDmmOZd1n.diag
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc      8923 Nov 26 17:39 runtime_log.err
[2025-11-26 17:39:10] -rw-r--r-- 1 boinc boinc     21333 Nov 26 17:39 stderr.txt
[2025-11-26 17:39:10] HITS file was successfully produced:
[2025-11-26 17:39:10] -rw------- 1 boinc boinc 910793211 Nov 26 17:38 shared/HITS.pool.root.1
[2025-11-26 17:39:10]  *** Contents of shared directory: ***
[2025-11-26 17:39:10] total 1291988
[2025-11-26 17:39:10] -rw-r--r-- 2 boinc boinc     15847 Nov 26 13:31 start_atlas.sh
[2025-11-26 17:39:10] -rw-r--r-- 2 boinc boinc    590109 Nov 26 13:31 input.tar.gz
[2025-11-26 17:39:10] -rw-r--r-- 2 boinc boinc 407841040 Nov 26 13:31 ATLAS.root_0
[2025-11-26 17:39:10] -rw------- 1 boinc boinc 910793211 Nov 26 17:38 HITS.pool.root.1
[2025-11-26 17:39:10] -rw------- 1 boinc boinc   3737600 Nov 26 17:39 result.tar.gz
17:39:11 (2547933): run_atlas exited; CPU time 105741.918928
17:39:11 (2547933): called boinc_finish(0)

</stderr_txt>
]]>

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