Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:55:32 (15254): wrapper (7.7.26015): starting
11:55:32 (15254): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 11:55:32] Arguments: --nthreads 8
[2025-11-26 11:55:32] Threads: 8
[2025-11-26 11:55:32] Checking for CVMFS
[2025-11-26 11:55:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:55:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:55:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:55:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:55:33] 2.13.3.0 12763 30271 183540 153328 1 711 23764224 40960000 52448 16776704 0 258570870 99.743 159022176 35832 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 11:55:33] CVMFS is ok
[2025-11-26 11:55:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:55:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:55:33] Further information can be found at the LHC@home message board.
[2025-11-26 11:55:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:55:33] Checking for apptainer binary...
[2025-11-26 11:55:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:55:33] Running /usr/bin/apptainer --version
[2025-11-26 11:55:33] apptainer version 1.4.4-1.el9
[2025-11-26 11:55:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:55:33] c7-2-17.aglt2.org
[2025-11-26 11:55:33] apptainer works
[2025-11-26 11:55:33] Set ATHENA_PROC_NUMBER=8
[2025-11-26 11:55:33] Set ATHENA_CORE_NUMBER=8
[2025-11-26 11:55:33] Starting ATLAS job with PandaID=6898120439
[2025-11-26 11:55:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:22:27]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:22:27] 2025-11-27 14:21:42,949 | INFO     | executing command: lscpu
[2025-11-27 09:22:27] 2025-11-27 14:21:43,022 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 09:22:27] 2025-11-27 14:21:43,053 | INFO     | monitor loop #4794: job 0:6898120439 is in state 'finished'
[2025-11-27 09:22:27] 2025-11-27 14:21:43,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:22:27] 2025-11-27 14:21:44,457 | INFO     | time since job start (77146s) is within the limit (172800.0s)
[2025-11-27 09:22:27] 2025-11-27 14:21:45,567 | INFO     | monitor loop #4795: job 0:6898120439 is in state 'finished'
[2025-11-27 09:22:27] 2025-11-27 14:21:45,567 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:22:27] 2025-11-27 14:21:46,475 | INFO     | time since job start (77148s) is within the limit (172800.0s)
[2025-11-27 09:22:27] 2025-11-27 14:21:48,116 | INFO     | monitor loop #4796: job 0:6898120439 is in state 'finished'
[2025-11-27 09:22:27] 2025-11-27 14:21:48,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:22:27] 2025-11-27 14:21:48,482 | INFO     | time since job start (77150s) is within the limit (172800.0s)
[2025-11-27 09:22:27] 2025-11-27 14:21:50,488 | INFO     | time since job start (77152s) is within the limit (172800.0s)
[2025-11-27 09:22:27] 2025-11-27 14:21:50,631 | INFO     | monitor loop #4797: job 0:6898120439 is in state 'finished'
[2025-11-27 09:22:27] 2025-11-27 14:21:50,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:22:27] 2025-11-27 14:21:52,511 | INFO     | time since job start (77154s) is within the limit (172800.0s)
[2025-11-27 09:22:27] 2025-11-27 14:21:53,112 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 09:22:27] 2025-11-27 14:21:53,124 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3378.069218750001
[2025-11-27 09:22:27] 2025-11-27 14:21:53,138 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6898120439/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 09:22:27] 2025-11-27 14:21:53,140 | INFO     | extracted standard info from prmon json
[2025-11-27 09:22:27] 2025-11-27 14:21:53,140 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 09:22:27] 2025-11-27 14:21:53,140 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:22:27] 2025-11-27 14:21:53,220 | INFO     | fitting pss+swap vs Time
[2025-11-27 09:22:27] 2025-11-27 14:21:53,221 | INFO     | sum of square deviations: 626225290144.1996
[2025-11-27 09:22:27] 2025-11-27 14:21:53,264 | INFO     | sum of deviations: 23095625318461.53
[2025-11-27 09:22:27] 2025-11-27 14:21:53,264 | INFO     | mean x: 1764214722.868671
[2025-11-27 09:22:27] 2025-11-27 14:21:53,264 | INFO     | mean y: 4679501.840189873
[2025-11-27 09:22:27] 2025-11-27 14:21:53,264 | INFO     | intersect: -65060789526.57587
[2025-11-27 09:22:27] 2025-11-27 14:21:53,265 | INFO     | chi2: 36.57800376908576
[2025-11-27 09:22:27] 2025-11-27 14:21:53,266 | INFO     | sum of square deviations: 618823507443.5167
[2025-11-27 09:22:27] 2025-11-27 14:21:53,274 | INFO     | monitor loop #4798: job 0:6898120439 is in state 'finished'
[2025-11-27 09:22:27] 2025-11-27 14:21:53,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:22:27] 2025-11-27 14:21:53,296 | INFO     | sum of deviations: 23877242928387.555
[2025-11-27 09:22:27] 2025-11-27 14:21:53,296 | INFO     | mean x: 1764214570.370135
[2025-11-27 09:22:27] 2025-11-27 14:21:53,296 | INFO     | mean y: 4695605.131850675
[2025-11-27 09:22:27] 2025-11-27 14:21:53,296 | INFO     | intersect: -68067346532.623436
[2025-11-27 09:22:27] 2025-11-27 14:21:53,297 | INFO     | chi2: 31.806544295194943
[2025-11-27 09:22:27] 2025-11-27 14:21:53,297 | INFO     | current chi2=31.806544295194943 (change=13.044614200415882 %)
[2025-11-27 09:22:27] 2025-11-27 14:21:53,297 | INFO     | right removable region: 1258
[2025-11-27 09:22:27] 2025-11-27 14:21:53,298 | INFO     | sum of square deviations: 618823223183.5172
[2025-11-27 09:22:27] 2025-11-27 14:21:53,324 | INFO     | sum of deviations: 22275514928446.64
[2025-11-27 09:22:27] 2025-11-27 14:21:53,324 | INFO     | mean x: 1764214875.370135
[2025-11-27 09:22:27] 2025-11-27 14:21:53,324 | INFO     | mean y: 4696397.42573471
[2025-11-27 09:22:27] 2025-11-27 14:21:53,324 | INFO     | intersect: -63500992014.07832
[2025-11-27 09:22:27] 2025-11-27 14:21:53,325 | INFO     | chi2: 32.93315379957789
[2025-11-27 09:22:27] 2025-11-27 14:21:53,325 | INFO     | current chi2=32.93315379957789 (change=9.964595095231394 %)
[2025-11-27 09:22:27] 2025-11-27 14:21:53,325 | INFO     | left removable region: 10
[2025-11-27 09:22:27] 2025-11-27 14:21:53,326 | INFO     | sum of square deviations: 602744818049.9967
[2025-11-27 09:22:27] 2025-11-27 14:21:53,351 | INFO     | sum of deviations: 22650517536269.883
[2025-11-27 09:22:27] 2025-11-27 14:21:53,351 | INFO     | mean x: 1764214844.8733974
[2025-11-27 09:22:27] 2025-11-27 14:21:53,351 | INFO     | mean y: 4728433.512019231
[2025-11-27 09:22:27] 2025-11-27 14:21:53,351 | INFO     | intersect: -66292613467.87931
[2025-11-27 09:22:27] 2025-11-27 14:21:53,352 | INFO     | chi2: 25.76119626315265
[2025-11-27 09:22:27] 2025-11-27 14:21:53,353 | INFO     | current memory leak: 37.58 B/s (using 1248 data points, chi2=25.76)
[2025-11-27 09:22:27] 2025-11-27 14:21:53,354 | INFO     | could have reported an average CPU frequency of 3346 MHz (46 samples)
[2025-11-27 09:22:27] 2025-11-27 14:21:53,354 | INFO     | ..............................
[2025-11-27 09:22:27] 2025-11-27 14:21:53,354 | INFO     | . Timing measurements:
[2025-11-27 09:22:27] 2025-11-27 14:21:53,354 | INFO     | . get job = 0 s
[2025-11-27 09:22:27] 2025-11-27 14:21:53,354 | INFO     | . initial setup = 2 s
[2025-11-27 09:22:27] 2025-11-27 14:21:53,354 | INFO     | . payload setup = 12 s
[2025-11-27 09:22:27] 2025-11-27 14:21:53,354 | INFO     | . stage-in = 0 s
[2025-11-27 09:22:27] 2025-11-27 14:21:53,354 | INFO     | . payload execution = 77100 s
[2025-11-27 09:22:27] 2025-11-27 14:21:53,354 | INFO     | . stage-out = 4 s
[2025-11-27 09:22:27] 2025-11-27 14:21:53,354 | INFO     | . log creation = 1 s
[2025-11-27 09:22:27] 2025-11-27 14:21:53,354 | INFO     | ..............................
[2025-11-27 09:22:27] 2025-11-27 14:21:53,427 | INFO     | 
[2025-11-27 09:22:27] 2025-11-27 14:21:53,432 | INFO     | job summary report
[2025-11-27 09:22:27] 2025-11-27 14:21:53,432 | INFO     | --------------------------------------------------
[2025-11-27 09:22:27] 2025-11-27 14:21:53,432 | INFO     | PanDA job id: 6898120439
[2025-11-27 09:22:27] 2025-11-27 14:21:53,432 | INFO     | task id: 47556161
[2025-11-27 09:22:27] 2025-11-27 14:21:53,432 | INFO     | errors: (none)
[2025-11-27 09:22:27] 2025-11-27 14:21:53,432 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 09:22:27] 2025-11-27 14:21:53,432 | INFO     | pilot state: finished 
[2025-11-27 09:22:27] 2025-11-27 14:21:53,432 | INFO     | transexitcode: 0
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | exeerrorcode: 0
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | exeerrordiag: 
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | exitcode: 0
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | exitmsg: OK
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | cpuconsumptiontime: 197061 s
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | nevents: 1000
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | neventsw: 0
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | pid: 34941
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | pgrp: 34941
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | corecount: 8
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | event service: False
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | sizes: {0: 2284263, 8: 2284525, 11: 2284553, 77114: 2345598, 77120: 2354592, 77123: 2354648, 77134: 2355022}
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | --------------------------------------------------
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | 
[2025-11-27 09:22:27] 2025-11-27 14:21:53,433 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 09:22:27] 2025-11-27 14:21:53,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 09:22:27] 2025-11-27 14:21:53,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 09:22:27] 2025-11-27 14:21:53,535 | INFO     | job 6898120439 has completed (purged errors)
[2025-11-27 09:22:27] 2025-11-27 14:21:53,535 | INFO     | overall cleanup function is called
[2025-11-27 09:22:27] 2025-11-27 14:21:54,552 | INFO     | --- collectZombieJob: --- 10, [34941]
[2025-11-27 09:22:27] 2025-11-27 14:21:54,552 | INFO     | zombie collector waiting for pid 34941
[2025-11-27 09:22:27] 2025-11-27 14:21:54,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 09:22:27] 2025-11-27 14:21:54,580 | INFO     | collected zombie processes
[2025-11-27 09:22:27] 2025-11-27 14:21:54,580 | INFO     | will attempt to kill all subprocesses of pid=34941
[2025-11-27 09:22:27] 2025-11-27 14:21:55,585 | INFO     | process IDs to be killed: [34941] (in reverse order)
[2025-11-27 09:22:27] 2025-11-27 14:21:55,820 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 09:22:27] 2025-11-27 14:21:55,821 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 09:22:27] 2025-11-27 14:21:55,854 | INFO     | did not find any defunct processes belonging to 34941
[2025-11-27 09:22:27] 2025-11-27 14:21:55,884 | INFO     | did not find any defunct processes belonging to 34941
[2025-11-27 09:22:27] 2025-11-27 14:21:55,885 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 09:22:27] 2025-11-27 14:21:55,885 | INFO     | ready for new job
[2025-11-27 09:22:27] 2025-11-27 14:21:55,885 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 09:22:27] 2025-11-27 14:21:55,889 | INFO     | ***************************************
[2025-11-27 09:22:27] 2025-11-27 14:21:55,889 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 09:22:27] 2025-11-27 14:21:55,889 | INFO     | ***************************************
[2025-11-27 09:22:27] 2025-11-27 14:21:55,890 | INFO     | 
[2025-11-27 09:22:27] 2025-11-27 14:21:55,894 | INFO     | architecture information:
[2025-11-27 09:22:27] 2025-11-27 14:21:55,895 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:22:27] 2025-11-27 14:21:55,915 | INFO     | cat /etc/os-release:
[2025-11-27 09:22:27] NAME="CentOS Linux"
[2025-11-27 09:22:27] VERSION="7 (Core)"
[2025-11-27 09:22:27] ID="centos"
[2025-11-27 09:22:27] ID_LIKE="rhel fedora"
[2025-11-27 09:22:27] VERSION_ID="7"
[2025-11-27 09:22:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:22:27] ANSI_COLOR="0;31"
[2025-11-27 09:22:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:22:27] HOME_URL="https://www.centos.org/"
[2025-11-27 09:22:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:22:27] 
[2025-11-27 09:22:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:22:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:22:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:22:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:22:27] 
[2025-11-27 09:22:27] 2025-11-27 14:21:55,916 | INFO     | ***************************************
[2025-11-27 09:22:27] 2025-11-27 14:21:56,419 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 09:22:27] 2025-11-27 14:21:56,441 | INFO     | sufficient remaining disk space (120259084288 B)
[2025-11-27 09:22:27] 2025-11-27 14:21:56,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:22:27] 2025-11-27 14:21:56,442 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:22:27] 2025-11-27 14:21:56,442 | INFO     | update_server=False
[2025-11-27 09:22:27] 2025-11-27 14:21:56,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:22:27] 2025-11-27 14:21:56,476 | INFO     | all data control threads have been joined
[2025-11-27 09:22:27] 2025-11-27 14:21:56,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:22:27] 2025-11-27 14:21:56,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:22:27] 2025-11-27 14:21:56,785 | INFO     | aborting loop
[2025-11-27 09:22:27] 2025-11-27 14:21:56,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:22:27] 2025-11-27 14:21:57,454 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:57,466 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:57,486 | INFO     | [data] control thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:57,600 | INFO     | all job control threads have been joined
[2025-11-27 09:22:27] 2025-11-27 14:21:57,686 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:57,805 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:57,914 | INFO     | all payload control threads have been joined
[2025-11-27 09:22:27] 2025-11-27 14:21:58,311 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:58,347 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:58,358 | INFO     | [job] validate thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:58,422 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:58,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:22:27] 2025-11-27 14:21:58,510 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:58,609 | INFO     | [job] control thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:58,902 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:58,926 | INFO     | [payload] control thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:58,947 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:21:59,494 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:22:00,787 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:22:27] 2025-11-27 14:22:10,722 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:22:27] 2025-11-27 14:22:12,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140619777996608)>', '<ExcThread(monitor, started 140619133462272)>']
[2025-11-27 09:22:27] 2025-11-27 14:22:17,500 | INFO     | all workflow threads have been joined
[2025-11-27 09:22:27] 2025-11-27 14:22:17,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:22:27] 2025-11-27 14:22:17,501 | INFO     | traces error code: 0
[2025-11-27 09:22:27] 2025-11-27 14:22:17,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:22:27] 2025-11-27 14:22:26,702 | INFO     | PID=20953 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 09:22:27] 2025-11-27 14:22:26,711 | INFO     | .. there are 86 such processes running
[2025-11-27 09:22:27] 2025-11-27 14:22:26,711 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:22:27] 2025-11-27 14:22:26,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:22:27] 2025-11-27 14:22:26,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:22:27] 2025-11-27 14:22:26,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:22:27] 2025-11-27 14:22:26,712 | INFO     | [monitor] control thread has ended
[2025-11-27 09:22:27] 2025-11-27 14:22:26,915 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:22:27] 2025-11-27 14:22:26,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:22:27] 2025-11-27 14:22:26,922 [wrapper] pilotpid: 20953
[2025-11-27 09:22:27] 2025-11-27 14:22:26,935 [wrapper] Pilot exit status: 0
[2025-11-27 09:22:27] 2025-11-27 14:22:26,998 [wrapper] pandaids: 6898120439
[2025-11-27 09:22:27] 2025-11-27 14:22:27,221 [wrapper] cleanup supervisor_pilot 3144504 20954
[2025-11-27 09:22:27] 2025-11-27 14:22:27,231 [wrapper] Test setup, not cleaning
[2025-11-27 09:22:27] 2025-11-27 14:22:27,236 [wrapper] apfmon messages muted
[2025-11-27 09:22:27] 2025-11-27 14:22:27,238 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:22:27] 2025-11-27 14:22:27,241 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:22:27]  *** Error codes and diagnostics ***
[2025-11-27 09:22:27]     "exeErrorCode": 0,
[2025-11-27 09:22:27]     "exeErrorDiag": "",
[2025-11-27 09:22:27]     "pilotErrorCode": 0,
[2025-11-27 09:22:27]     "pilotErrorDiag": "",
[2025-11-27 09:22:27]  *** Listing of results directory ***
[2025-11-27 09:22:27] total 1326956
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 09:22:27] -rwx------. 1 boincer umatlas     36292 Nov 25 22:26 runpilot2-wrapper.sh
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:26 queuedata.json
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas       100 Nov 26 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:22:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 11:55 run_atlas
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas       105 Nov 26 11:55 job.xml
[2025-11-27 09:22:27] -rw-r--r--. 2 boincer umatlas 410124669 Nov 26 11:55 EVNT.47483658._002427.pool.root.1
[2025-11-27 09:22:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 11:55 start_atlas.sh
[2025-11-27 09:22:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 11:55 shared
[2025-11-27 09:22:27] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 11:55 input.tar.gz
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas         0 Nov 26 11:55 boinc_lockfile
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 11:55 pandaJob.out
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas        57 Nov 26 11:55 setup.sh.local
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas    991545 Nov 26 11:55 agis_schedconf.cvmfs.json
[2025-11-27 09:22:27] drwx------. 5 boincer umatlas      4096 Nov 26 11:55 pilot3
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas       533 Nov 27 09:12 boinc_task_state.xml
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas      6946 Nov 27 09:13 init_data.xml
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas 920252507 Nov 27 09:20 HITS.47556161._004097.pool.root.1
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas      1078 Nov 27 09:21 memory_monitor_summary.json
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas   1516240 Nov 27 09:21 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas   2349229 Nov 27 09:21 log.47556161._004097.job.log.tgz.1
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas      8640 Nov 27 09:21 heartbeat.json
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas        95 Nov 27 09:21 pilot_heartbeat.json
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas        29 Nov 27 09:22 wrapper_checkpoint.txt
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas       821 Nov 27 09:22 pilotlog.txt
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas   9906118 Nov 27 09:22 log.47556161._004097.job.log.1
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 09:22 boinc_mmap_file
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas       353 Nov 27 09:22 output.list
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas       620 Nov 27 09:22 runtime_log
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas  12277760 Nov 27 09:22 result.tar.gz
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 09:22 runtime_log.err
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas       666 Nov 27 09:22 qtmLDmrLLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRoMKDmNMViym.diag
[2025-11-27 09:22:27] -rw-r--r--. 1 boincer umatlas      8210 Nov 27 09:22 stderr.txt
[2025-11-27 09:22:27] HITS file was successfully produced:
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas 920252507 Nov 27 09:20 shared/HITS.pool.root.1
[2025-11-27 09:22:27]  *** Contents of shared directory: ***
[2025-11-27 09:22:27] total 1311800
[2025-11-27 09:22:27] -rw-r--r--. 2 boincer umatlas 410124669 Nov 26 11:55 ATLAS.root_0
[2025-11-27 09:22:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 11:55 start_atlas.sh
[2025-11-27 09:22:27] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 11:55 input.tar.gz
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas 920252507 Nov 27 09:20 HITS.pool.root.1
[2025-11-27 09:22:27] -rw-------. 1 boincer umatlas  12277760 Nov 27 09:22 result.tar.gz
09:22:49 (15254): run_atlas exited; CPU time 200003.743527
09:22:49 (15254): called boinc_finish(0)

</stderr_txt>
]]>

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