Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:24:35 (1123274): wrapper (7.7.26015): starting
08:24:35 (1123274): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 08:24:35] Arguments: --nthreads 12
[2025-11-26 08:24:35] Threads: 12
[2025-11-26 08:24:35] Checking for CVMFS
[2025-11-26 08:24:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:24:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:24:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:24:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:24:35] 2.11.5.0 3953955 28523 214912 153328 0 289 29089487 45568000 14206 130560 0 253471071 99.797 155484700 28472 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-26 08:24:35] CVMFS is ok
[2025-11-26 08:24:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:24:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:24:35] Further information can be found at the LHC@home message board.
[2025-11-26 08:24:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:24:35] Checking for apptainer binary...
[2025-11-26 08:24:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:24:35] Running /usr/bin/apptainer --version
[2025-11-26 08:24:35] apptainer version 1.4.1-1.el9
[2025-11-26 08:24:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:24:35] wns0046.triumf.lcg
[2025-11-26 08:24:35] apptainer works
[2025-11-26 08:24:35] Set ATHENA_PROC_NUMBER=12
[2025-11-26 08:24:35] Set ATHENA_CORE_NUMBER=12
[2025-11-26 08:24:35] Starting ATLAS job with PandaID=6898040309
[2025-11-26 08:24:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:28:50]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:28:50] 2025-11-26 16:27:58,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 08:28:50] 2025-11-26 16:27:58,600 | WARNING  | wrong length of table data, x=[1764174307.0], y=[1270.0] (must be same and length>=4)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | could have reported an average CPU frequency of 2653 MHz (4 samples)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | ..............................
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . Timing measurements:
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . get job = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . initial setup = 2 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . payload setup = 4 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . stage-in = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . payload execution = 48 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | . stage-out = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | . log creation = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | ..............................
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898040309/pilotlog.txt
[2025-11-26 08:28:50] 2025-11-26 16:27:58,611 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-26 08:28:50] - Log from pilotlog.txt -
[2025-11-26 08:28:50] 2025-11-26 16:27:58,599 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898040309/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,599 | INFO     | extracted standard info from prmon json
[2025-11-26 08:28:50] 2025-11-26 16:27:58,599 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:28:50] 2025-11-26 16:27:58,599 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:28:50] 2025-11-26 16:27:58,600 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 08:28:50] 2025-11-26 16:27:58,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 08:28:50] 2025-11-26 16:27:58,600 | WARNING  | wrong length of table data, x=[1764174307.0], y=[1270.0] (must be same and length>=4)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | could have reported an average CPU frequency of 2653 MHz (4 samples)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | ..............................
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . Timing measurements:
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . get job = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . initial setup = 2 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . payload setup = 4 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . stage-in = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . payload execution = 48 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | . stage-out = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | . log creation = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | ..............................
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898040309/pilotlog.txt
[2025-11-26 08:28:50] 2025-11-26 16:27:58,611 | WARNING  | 
[2025-11-26 08:28:50] [begin log extracts]
[2025-11-26 08:28:50] - Log from pilotlog.txt -
[2025-11-26 08:28:50] 2025-11-26 16:27:58,599 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898040309/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,599 | INFO     | extracted standard info from prmon json
[2025-11-26 08:28:50] 2025-11-26 16:27:58,599 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:28:50] 2025-11-26 16:27:58,599 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:28:50] 2025-11-26 16:27:58,600 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 08:28:50] 2025-11-26 16:27:58,600 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 08:28:50] 2025-11-26 16:27:58,600 | WARNING  | wrong length of table data, x=[1764174307.0], y=[1270.0] (must be same and length>=4)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | could have reported an average CPU frequency of 2653 MHz (4 samples)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | ..............................
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . Timing measurements:
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . get job = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . initial setup = 2 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . payload setup = 4 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . stage-in = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,601 | INFO     | . payload execution = 48 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | . stage-out = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | . log creation = 0 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | ..............................
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 08:28:50] 2025-11-26 16:27:58,602 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898040309/pilotlog.txt
[2025-11-26 08:28:50] [end log extracts]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,612 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,612 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-26 08:28:50] 2025-11-26 16:27:58,625 | INFO     | time since job start (194s) is within the limit (172800.0s)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,668 | INFO     | 
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | job summary report
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | --------------------------------------------------
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | PanDA job id: 6898040309
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | task id: 47556173
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-26 08:25:48,213 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | pilot state: failed 
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | transexitcode: 65
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | exeerrorcode: 65
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | exitcode: 65
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | cpuconsumptiontime: 41 s
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | nevents: 0
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | neventsw: 0
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | pid: 1136548
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | pgrp: 1136548
[2025-11-26 08:28:50] 2025-11-26 16:27:58,669 | INFO     | corecount: 12
[2025-11-26 08:28:50] 2025-11-26 16:27:58,670 | INFO     | event service: False
[2025-11-26 08:28:50] 2025-11-26 16:27:58,670 | INFO     | sizes: {0: 2284090, 1: 2284289, 4: 2284551, 11: 2284579, 57: 2310084, 58: 2314374, 60: 2314530, 181: 2314696}
[2025-11-26 08:28:50] 2025-11-26 16:27:58,670 | INFO     | --------------------------------------------------
[2025-11-26 08:28:50] 2025-11-26 16:27:58,670 | INFO     | 
[2025-11-26 08:28:50] 2025-11-26 16:27:58,670 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-26 08:28:50] 2025-11-26 16:27:58,683 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,685 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,685 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,685 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:28:50] 2025-11-26 16:27:58,685 | INFO     | job 6898040309 has completed (purged errors)
[2025-11-26 08:28:50] 2025-11-26 16:27:58,685 | INFO     | overall cleanup function is called
[2025-11-26 08:28:50] 2025-11-26 16:27:59,692 | INFO     | --- collectZombieJob: --- 10, [1136548]
[2025-11-26 08:28:50] 2025-11-26 16:27:59,692 | INFO     | zombie collector waiting for pid 1136548
[2025-11-26 08:28:50] 2025-11-26 16:27:59,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:28:50] 2025-11-26 16:27:59,692 | INFO     | collected zombie processes
[2025-11-26 08:28:50] 2025-11-26 16:27:59,693 | INFO     | will attempt to kill all subprocesses of pid=1136548
[2025-11-26 08:28:50] 2025-11-26 16:27:59,833 | INFO     | process IDs to be killed: [1136548] (in reverse order)
[2025-11-26 08:28:50] 2025-11-26 16:27:59,888 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:28:50] 2025-11-26 16:27:59,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:28:50] 2025-11-26 16:27:59,894 | INFO     | did not find any defunct processes belonging to 1136548
[2025-11-26 08:28:50] 2025-11-26 16:27:59,900 | INFO     | did not find any defunct processes belonging to 1136548
[2025-11-26 08:28:50] 2025-11-26 16:27:59,901 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:28:50] 2025-11-26 16:27:59,901 | INFO     | ready for new job
[2025-11-26 08:28:50] 2025-11-26 16:27:59,901 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:28:50] 2025-11-26 16:27:59,902 | INFO     | ***************************************
[2025-11-26 08:28:50] 2025-11-26 16:27:59,902 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:28:50] 2025-11-26 16:27:59,902 | INFO     | ***************************************
[2025-11-26 08:28:50] 2025-11-26 16:27:59,902 | INFO     | 
[2025-11-26 08:28:50] 2025-11-26 16:27:59,904 | INFO     | architecture information:
[2025-11-26 08:28:50] 2025-11-26 16:27:59,905 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:28:50] 2025-11-26 16:27:59,914 | INFO     | cat /etc/os-release:
[2025-11-26 08:28:50] NAME="CentOS Linux"
[2025-11-26 08:28:50] VERSION="7 (Core)"
[2025-11-26 08:28:50] ID="centos"
[2025-11-26 08:28:50] ID_LIKE="rhel fedora"
[2025-11-26 08:28:50] VERSION_ID="7"
[2025-11-26 08:28:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:28:50] ANSI_COLOR="0;31"
[2025-11-26 08:28:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:28:50] HOME_URL="https://www.centos.org/"
[2025-11-26 08:28:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:28:50] 
[2025-11-26 08:28:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:28:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:28:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:28:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:28:50] 
[2025-11-26 08:28:50] 2025-11-26 16:27:59,914 | INFO     | ***************************************
[2025-11-26 08:28:50] 2025-11-26 16:28:00,416 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-26 08:28:50] 2025-11-26 16:28:00,429 | INFO     | sufficient remaining disk space (2003193298944 B)
[2025-11-26 08:28:50] 2025-11-26 16:28:00,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:28:50] 2025-11-26 16:28:00,429 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:28:50] 2025-11-26 16:28:00,429 | INFO     | update_server=False
[2025-11-26 08:28:50] 2025-11-26 16:28:00,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:28:50] 2025-11-26 16:28:00,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:28:50] 2025-11-26 16:28:00,429 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 08:28:50] 2025-11-26 16:28:00,430 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:28:50] 2025-11-26 16:28:00,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:28:50] 2025-11-26 16:28:00,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:28:50] 2025-11-26 16:28:00,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:28:50] 2025-11-26 16:28:00,879 | INFO     | aborting loop
[2025-11-26 08:28:50] 2025-11-26 16:28:00,893 | INFO     | all payload control threads have been joined
[2025-11-26 08:28:50] 2025-11-26 16:28:01,308 | INFO     | all data control threads have been joined
[2025-11-26 08:28:50] 2025-11-26 16:28:01,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:28:50] 2025-11-26 16:28:01,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:28:50] 2025-11-26 16:28:01,434 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:01,435 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:01,469 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:01,586 | INFO     | all job control threads have been joined
[2025-11-26 08:28:50] 2025-11-26 16:28:01,809 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:01,883 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:01,898 | INFO     | [payload] control thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:02,147 | INFO     | [job] validate thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:02,316 | INFO     | [data] control thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:02,323 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:02,389 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:02,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:02,572 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:02,592 | INFO     | [job] control thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:02,697 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:03,337 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:05,325 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:28:50] 2025-11-26 16:28:44,041 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:28:50] 2025-11-26 16:28:45,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140498376988480)>', '<ExcThread(monitor, started 140497699989248)>']
[2025-11-26 08:28:50] 2025-11-26 16:28:45,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:28:50] 2025-11-26 16:28:45,651 | INFO     | [monitor] control thread has ended
[2025-11-26 08:28:50] 2025-11-26 16:28:50,246 | INFO     | all workflow threads have been joined
[2025-11-26 08:28:50] 2025-11-26 16:28:50,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:28:50] 2025-11-26 16:28:50,246 | INFO     | traces error code: 0
[2025-11-26 08:28:50] 2025-11-26 16:28:50,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:28:50] 2025-11-26 16:28:50,375 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:28:50] 2025-11-26 16:28:50,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:28:50] 2025-11-26 16:28:50,379 [wrapper] pilotpid: 1128060
[2025-11-26 08:28:50] 2025-11-26 16:28:50,381 [wrapper] Pilot exit status: 0
[2025-11-26 08:28:50] 2025-11-26 16:28:50,401 [wrapper] pandaids: 6898040309
[2025-11-26 08:28:50] 2025-11-26 16:28:50,439 [wrapper] cleanup supervisor_pilot 1128066 1128061
[2025-11-26 08:28:50] 2025-11-26 16:28:50,443 [wrapper] Test setup, not cleaning
[2025-11-26 08:28:50] 2025-11-26 16:28:50,446 [wrapper] apfmon messages muted
[2025-11-26 08:28:50] 2025-11-26 16:28:50,448 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:28:50] 2025-11-26 16:28:50,450 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:28:50]  *** Error codes and diagnostics ***
[2025-11-26 08:28:50]     "exeErrorCode": 65,
[2025-11-26 08:28:50]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-26 08:28:50]     "pilotErrorCode": 1305,
[2025-11-26 08:28:50]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-26 08:28:50]  *** Listing of results directory ***
[2025-11-26 08:28:50] total 403268
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc    576529 Nov 25 18:38 pilot3.tar.gz
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc      5112 Nov 25 19:12 queuedata.json
[2025-11-26 08:28:50] -rwx------. 1 boinc boinc     36292 Nov 25 19:13 runpilot2-wrapper.sh
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc       100 Nov 26 08:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:28:50] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 08:24 run_atlas
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc       105 Nov 26 08:24 job.xml
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc      6595 Nov 26 08:24 init_data.xml
[2025-11-26 08:28:50] -rw-r--r--. 2 boinc boinc 408749658 Nov 26 08:24 EVNT.47483658._003160.pool.root.1
[2025-11-26 08:28:50] -rw-r--r--. 2 boinc boinc     15847 Nov 26 08:24 start_atlas.sh
[2025-11-26 08:28:50] drwxrwx--x. 2 boinc boinc      4096 Nov 26 08:24 shared
[2025-11-26 08:28:50] -rw-r--r--. 2 boinc boinc    590103 Nov 26 08:24 input.tar.gz
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc         0 Nov 26 08:24 boinc_lockfile
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc      2785 Nov 26 08:24 pandaJob.out
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc    991545 Nov 26 08:24 agis_schedconf.cvmfs.json
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc   1516240 Nov 26 08:24 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:28:50] drwx------. 5 boinc boinc      4096 Nov 26 08:24 pilot3
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc       523 Nov 26 08:25 boinc_task_state.xml
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc       991 Nov 26 08:25 memory_monitor_summary.json
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc     48619 Nov 26 08:25 log.47556173._001162.job.log.tgz.1
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc        95 Nov 26 08:27 pilot_heartbeat.json
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc     10324 Nov 26 08:27 heartbeat.json
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc        23 Nov 26 08:28 wrapper_checkpoint.txt
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc      8192 Nov 26 08:28 boinc_mmap_file
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc      4551 Nov 26 08:28 pilotlog.txt
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc     92874 Nov 26 08:28 log.47556173._001162.job.log.1
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc       186 Nov 26 08:28 output.list
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc       620 Nov 26 08:28 runtime_log
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc    163840 Nov 26 08:28 result.tar.gz
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc      8636 Nov 26 08:28 runtime_log.err
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc       644 Nov 26 08:28 LrHLDmf9Ki8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuqJKDmDCeAcn.diag
[2025-11-26 08:28:50] -rw-r--r--. 1 boinc boinc     22349 Nov 26 08:28 stderr.txt
[2025-11-26 08:28:50] No HITS result produced
[2025-11-26 08:28:50]  *** Contents of shared directory: ***
[2025-11-26 08:28:50] total 399932
[2025-11-26 08:28:50] -rw-r--r--. 2 boinc boinc 408749658 Nov 26 08:24 ATLAS.root_0
[2025-11-26 08:28:50] -rw-r--r--. 2 boinc boinc     15847 Nov 26 08:24 start_atlas.sh
[2025-11-26 08:28:50] -rw-r--r--. 2 boinc boinc    590103 Nov 26 08:24 input.tar.gz
[2025-11-26 08:28:50] -rw-------. 1 boinc boinc    163840 Nov 26 08:28 result.tar.gz
08:28:51 (1123274): run_atlas exited; CPU time 39.758563
08:28:51 (1123274): called boinc_finish(0)

</stderr_txt>
]]>

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