Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-26 17:17:43 (20444): vboxwrapper version 26210
2025-11-26 17:17:43 (20444): BOINC client version: 8.0.2
2025-11-26 17:17:43 (20444): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-11-26 17:17:44 (20444): Successfully copied 'init_data.xml' to the shared directory.
2025-11-26 17:17:44 (20444): Create VM. (boinc_79b40a9f6af464bc, slot#1)
2025-11-26 17:17:44 (20444): Setting Memory Size for VM. (6200MB)
2025-11-26 17:17:45 (20444): Setting CPU Count for VM. (4)
2025-11-26 17:17:45 (20444): Setting Chipset Options for VM.
2025-11-26 17:17:45 (20444): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-26 17:17:45 (20444): Setting Boot Options for VM.
2025-11-26 17:17:46 (20444): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-26 17:17:46 (20444): Enabling VM Network Access.
2025-11-26 17:17:46 (20444): Disabling USB Support for VM.
2025-11-26 17:17:47 (20444): Disabling COM Port Support for VM.
2025-11-26 17:17:47 (20444): Disabling LPT Port Support for VM.
2025-11-26 17:17:47 (20444): Disabling Audio Support for VM.
2025-11-26 17:17:47 (20444): Disabling Clipboard Support for VM.
2025-11-26 17:17:48 (20444): Disabling Drag and Drop Support for VM.
2025-11-26 17:17:48 (20444): Adding storage controller(s) to VM.
2025-11-26 17:17:48 (20444): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-26 17:17:49 (20444): Adding VirtualBox Guest Additions to VM.
2025-11-26 17:17:49 (20444): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-26 17:17:49 (20444): forwarding host port 64008 to guest port 80
2025-11-26 17:17:49 (20444): Enabling remote desktop for VM.
2025-11-26 17:17:50 (20444): Enabling shared directory for VM.
2025-11-26 17:17:51 (20444): Starting VM using VBoxManage interface. (boinc_79b40a9f6af464bc, slot#1)
2025-11-26 17:17:56 (20444): Successfully started VM. (PID = '27384')
2025-11-26 17:17:56 (20444): Reporting VM Process ID to BOINC.
2025-11-26 17:17:56 (20444): Guest Log: BIOS: VirtualBox 7.0.12
2025-11-26 17:17:56 (20444): Guest Log: CPUID EDX: 0x178bfbff
2025-11-26 17:17:56 (20444): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-26 17:17:56 (20444): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-26 17:17:56 (20444): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-26 17:17:56 (20444): Detected: Web Application Enabled (http://localhost:64008)
2025-11-26 17:17:56 (20444): Detected: Remote Desktop Enabled (localhost:64009)
2025-11-26 17:17:56 (20444): Preference change detected
2025-11-26 17:17:56 (20444): Setting CPU throttle for VM. (100%)
2025-11-26 17:17:56 (20444): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-26 17:17:58 (20444): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-26 17:17:58 (20444): Guest Log: BIOS: Booting from Hard Disk...
2025-11-26 17:18:00 (20444): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-26 17:18:00 (20444): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-26 17:18:00 (20444): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-26 17:18:07 (20444): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-26 17:18:07 (20444): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-26 17:18:10 (20444): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-26 17:18:10 (20444): Guest Log: 00:00:00.000092 main     Log opened 2025-11-26T17:18:08.565102000Z
2025-11-26 17:18:10 (20444): Guest Log: 00:00:00.000158 main     OS Product: Linux
2025-11-26 17:18:10 (20444): Guest Log: 00:00:00.000181 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-26 17:18:10 (20444): Guest Log: 00:00:00.000229 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-26 17:18:10 (20444): Guest Log: 00:00:00.000255 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-26 17:18:10 (20444): Guest Log: 00:00:00.000256 main     Process ID: 1359
2025-11-26 17:18:10 (20444): Guest Log: 00:00:00.000256 main     Package type: LINUX_64BITS_GENERIC
2025-11-26 17:18:10 (20444): Guest Log: 00:00:00.000868 main     5.2.32 r132073 started. Verbose level = 0
2025-11-26 17:18:10 (20444): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-26 17:18:10 (20444): Guest Log: [INFO] Mounting shared directory
2025-11-26 17:18:10 (20444): Guest Log: [INFO] Checking for init_data.xml
2025-11-26 17:18:20 (20444): Guest Log: 00:00:10.040758 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 507 430 000ns (GuestNow=1 764 173 900 059 656 000 ns GuestLast=1 764 177 488 567 086 000 ns fSetTimeLastLoop=true )
2025-11-26 17:18:34 (20444): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-26 17:18:34 (20444): Guest Log: [INFO] Detected branch: prod
2025-11-26 17:18:35 (20444): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-26 17:18:35 (20444): Guest Log: Copying input files
2025-11-26 17:18:36 (20444): Guest Log: Copied input files into RunAtlas.
2025-11-26 17:18:36 (20444): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-11-26 17:19:39 (20444): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-26 17:19:39 (20444): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-26 17:19:39 (20444): Guest Log: 2.6.3.0 1638 1 29600 153328 3 1 3117639 4096000 0 65024 1 0 n/a 1 1 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-11-26 17:19:39 (20444): Guest Log: copied the webapp to /var/www
2025-11-26 17:19:39 (20444): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-26 17:19:39 (20444): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-26 17:19:39 (20444): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-26 17:19:39 (20444): Guest Log:  *** Starting ATLAS job. (PandaID=6898040262 taskID=47556161) ***
2025-11-26 18:58:00 (20444): Status Report: Elapsed Time: '6000.000000'
2025-11-26 18:58:00 (20444): Status Report: CPU Time: '20227.218750'
2025-11-26 20:38:05 (20444): Status Report: Elapsed Time: '12000.000000'
2025-11-26 20:38:05 (20444): Status Report: CPU Time: '44151.843750'
2025-11-26 22:18:09 (20444): Status Report: Elapsed Time: '18000.000000'
2025-11-26 22:18:09 (20444): Status Report: CPU Time: '68077.687500'
2025-11-26 23:58:14 (20444): Status Report: Elapsed Time: '24000.000000'
2025-11-26 23:58:14 (20444): Status Report: CPU Time: '92023.125000'
2025-11-27 00:19:25 (20444): Guest Log:  *** Job finished ***
2025-11-27 00:19:25 (20444): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:17,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:17,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:18,410 | INFO     | [monitor] cgroup control has ended
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:18,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631996135232)>', '<ExcThread(monitor, started 139631685244672)>']
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:19,532 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:19,532 | INFO     | [monitor] control thread has ended
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,603 | INFO     | all workflow threads have been joined
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,603 | INFO     | end of generic workflow (traces error code: 0)
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,603 | INFO     | traces error code: 0
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,603 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,646 [wrapper] ==== pilot stdout END ====
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,649 [wrapper] ==== wrapper stdout RESUME ====
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,652 [wrapper] pilotpid: 6056
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,654 [wrapper] Pilot exit status: 0
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,663 [wrapper] pandaids: 6898040262
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,681 [wrapper] cleanup supervisor_pilot   415 6057
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,684 [wrapper] Test setup, not cleaning
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,687 [wrapper] apfmon messages muted
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,689 [wrapper] ==== wrapper stdout END ====
2025-11-27 00:19:25 (20444): Guest Log: 2025-11-26 23:19:23,692 [wrapper] ==== wrapper stderr END ====
2025-11-27 00:19:25 (20444): Guest Log:  *** Error codes and diagnostics ***
2025-11-27 00:19:25 (20444): Guest Log:     "exeErrorCode": 0,
2025-11-27 00:19:25 (20444): Guest Log:     "exeErrorDiag": "",
2025-11-27 00:19:25 (20444): Guest Log:     "pilotErrorCode": 0,
2025-11-27 00:19:25 (20444): Guest Log:     "pilotErrorDiag": "",
2025-11-27 00:19:25 (20444): Guest Log:  *** Listing of results directory ***
2025-11-27 00:19:25 (20444): Guest Log: total 917928
2025-11-27 00:19:25 (20444): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 26 02:38 pilot3.tar.gz
2025-11-27 00:19:25 (20444): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 26 03:12 runpilot2-wrapper.sh
2025-11-27 00:19:25 (20444): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 26 03:12 queuedata.json
2025-11-27 00:19:25 (20444): Guest Log: -rwxr-xr-x. 1 atlas atlas      9331 Nov 26 16:18 init_data.xml
2025-11-27 00:19:25 (20444): Guest Log: -rwxr-xr-x. 1 atlas atlas    590101 Nov 26 16:18 input.tar.gz
2025-11-27 00:19:25 (20444): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 26 16:18 start_atlas.sh
2025-11-27 00:19:25 (20444): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 16:18 EVNT.47483658._002413.pool.root.1 -> /data/./ATLAS.root_0
2025-11-27 00:19:25 (20444): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 26 16:19 pandaJob.out
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas        49 Nov 26 16:19 setup.sh.local
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas    991545 Nov 26 16:21 agis_schedconf.cvmfs.json
2025-11-27 00:19:25 (20444): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 16:21 pilot3
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas 926928649 Nov 26 23:18 HITS.47556161._003956.pool.root.1
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 23:18 pilot_heartbeat.json
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas      1042 Nov 26 23:18 memory_monitor_summary.json
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 23:18 agis_ddmendpoints.agis.ALL.json
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas   1248215 Nov 26 23:18 log.47556161._003956.job.log.tgz.1
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas      8662 Nov 26 23:18 heartbeat.json
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas      5063 Nov 26 23:19 pilotlog.txt
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas   3344292 Nov 26 23:19 log.47556161._003956.job.log.1
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 23:19 output.list
2025-11-27 00:19:25 (20444): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 23:19 runtime_log
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas   4608000 Nov 26 23:19 result.tar.gz
2025-11-27 00:19:25 (20444): Guest Log: -rw-r--r--. 1 atlas atlas      9210 Nov 26 23:19 runtime_log.err
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas       652 Nov 26 23:19 nzJODmg8Ki8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrnMKDmPlIxIm.diag
2025-11-27 00:19:25 (20444): Guest Log: Looking for outputfile HITS.47556161._003956.pool.root.1
2025-11-27 00:19:25 (20444): Guest Log: HITS file was successfully produced
2025-11-27 00:19:25 (20444): Guest Log: -rw-------. 1 atlas atlas 926928649 Nov 26 23:18 /home/atlas/RunAtlas/HITS.47556161._003956.pool.root.1
2025-11-27 00:19:28 (20444): Guest Log: Successfully finished the ATLAS job!
2025-11-27 00:19:28 (20444): Guest Log: Copying the results back to the shared directory!
2025-11-27 00:19:28 (20444): Guest Log:  *** Contents of shared directory: ***
2025-11-27 00:19:28 (20444): Guest Log: total 1310518
2025-11-27 00:19:28 (20444): Guest Log: -rwxrwxrwx. 1 root root 409815076 Nov 26 16:17 ATLAS.root_0
2025-11-27 00:19:28 (20444): Guest Log: -rwxrwxrwx. 1 root root 926928649 Nov 26 23:19 HITS.pool.root.1
2025-11-27 00:19:28 (20444): Guest Log: -rwxrwxrwx. 1 root root      9331 Nov 26 16:17 init_data.xml
2025-11-27 00:19:28 (20444): Guest Log: -rwxrwxrwx. 1 root root    590101 Nov 26 16:17 input.tar.gz
2025-11-27 00:19:28 (20444): Guest Log: -rwxrwxrwx. 1 root root   4608000 Nov 26 23:19 result.tar.gz
2025-11-27 00:19:28 (20444): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 26 16:17 start_atlas.sh
2025-11-27 00:19:28 (20444): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-27 00:19:28 (20444): VM Completion File Detected.
2025-11-27 00:19:28 (20444): Powering off VM.
2025-11-27 00:19:28 (20444): Successfully stopped VM.
2025-11-27 00:19:28 (20444): Deregistering VM. (boinc_79b40a9f6af464bc, slot#1)
2025-11-27 00:19:28 (20444): Removing network bandwidth throttle group from VM.
2025-11-27 00:19:28 (20444): Removing VM from VirtualBox.
2025-11-27 00:19:34 (20444): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN