Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:22:28 (912506): wrapper (7.7.26015): starting
16:22:28 (912506): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 16:22:28] Arguments: --nthreads 12
[2025-11-26 16:22:28] Threads: 12
[2025-11-26 16:22:28] Checking for CVMFS
[2025-11-26 16:22:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:22:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:22:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:22:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:22:28] 2.13.2.0 2113 1441 46308 153328 0 80 2740687 4096000 94 130560 0 3101228 99.994 70936 781 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 16:22:28] CVMFS is ok
[2025-11-26 16:22:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:22:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:22:28] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 16:22:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 16:22:28] Further information can be found at the LHC@home message board.
[2025-11-26 16:22:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:22:28] Checking for apptainer binary...
[2025-11-26 16:22:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:22:28] Running /usr/bin/apptainer --version
[2025-11-26 16:22:28] apptainer version 1.4.3
[2025-11-26 16:22:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:22:28] test-run
[2025-11-26 16:22:28] apptainer works
[2025-11-26 16:22:28] Set ATHENA_PROC_NUMBER=12
[2025-11-26 16:22:28] Set ATHENA_CORE_NUMBER=12
[2025-11-26 16:22:28] Starting ATLAS job with PandaID=6898041229
[2025-11-26 16:22:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:26:40]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | will not add max space = 0 B to job metrics
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | WARNING  | wrong length of table data, x=[1764174168.0], y=[12134.0] (must be same and length>=4)
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | could have reported an average CPU frequency of 4299 MHz (4 samples)
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | ..............................
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . Timing measurements:
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . get job = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . initial setup = 2 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . payload setup = 1 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . stage-in = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . payload execution = 45 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . stage-out = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . log creation = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | ..............................
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6898041229/pilotlog.txt
[2025-11-26 16:26:40] 2025-11-26 16:25:32,695 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-26 16:26:40] - Log from pilotlog.txt -
[2025-11-26 16:26:40] 2025-11-26 16:25:32,691 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:26:40] 2025-11-26 16:25:32,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | WARNING  | found no stored workdir sizes
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | will not add max space = 0 B to job metrics
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | WARNING  | wrong length of table data, x=[1764174168.0], y=[12134.0] (must be same and length>=4)
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | could have reported an average CPU frequency of 4299 MHz (4 samples)
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | ..............................
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . Timing measurements:
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . get job = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . initial setup = 2 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . payload setup = 1 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . stage-in = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . payload execution = 45 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . stage-out = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . log creation = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | ..............................
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6898041229/pilotlog.txt
[2025-11-26 16:26:40] 2025-11-26 16:25:32,695 | WARNING  | 
[2025-11-26 16:26:40] [begin log extracts]
[2025-11-26 16:26:40] - Log from pilotlog.txt -
[2025-11-26 16:26:40] 2025-11-26 16:25:32,691 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:26:40] 2025-11-26 16:25:32,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | WARNING  | found no stored workdir sizes
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | will not add max space = 0 B to job metrics
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | WARNING  | wrong length of table data, x=[1764174168.0], y=[12134.0] (must be same and length>=4)
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | could have reported an average CPU frequency of 4299 MHz (4 samples)
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | ..............................
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . Timing measurements:
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . get job = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . initial setup = 2 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . payload setup = 1 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . stage-in = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . payload execution = 45 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . stage-out = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | . log creation = 0 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | ..............................
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 16:26:40] 2025-11-26 16:25:32,692 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-6898041229/pilotlog.txt
[2025-11-26 16:26:40] [end log extracts]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,695 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-26 16:26:40] 2025-11-26 16:25:32,695 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | 
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | job summary report
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | --------------------------------------------------
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | PanDA job id: 6898041229
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | task id: 47556161
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-26 16:23:28,218 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | pilot state: failed 
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | transexitcode: 65
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | exeerrorcode: 65
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "DetectorStore       FATAL in sysInitialize(): standard std::exception is
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | exitcode: 65
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "DetectorStore       FATAL in sysInitialize(): standard std::exception is caug
[2025-11-26 16:26:40] 2025-11-26 16:25:32,712 | INFO     | cpuconsumptiontime: 12 s
[2025-11-26 16:26:40] 2025-11-26 16:25:32,713 | INFO     | nevents: 0
[2025-11-26 16:26:40] 2025-11-26 16:25:32,713 | INFO     | neventsw: 0
[2025-11-26 16:26:40] 2025-11-26 16:25:32,713 | INFO     | pid: 923014
[2025-11-26 16:26:40] 2025-11-26 16:25:32,713 | INFO     | pgrp: 923014
[2025-11-26 16:26:40] 2025-11-26 16:25:32,713 | INFO     | corecount: 12
[2025-11-26 16:26:40] 2025-11-26 16:25:32,713 | INFO     | event service: False
[2025-11-26 16:26:40] 2025-11-26 16:25:32,713 | INFO     | sizes: {0: 2284271, 1: 2284533, 11: 2284561, 50: 2313603, 168: 2313741}
[2025-11-26 16:26:40] 2025-11-26 16:25:32,713 | INFO     | --------------------------------------------------
[2025-11-26 16:26:40] 2025-11-26 16:25:32,713 | INFO     | 
[2025-11-26 16:26:40] 2025-11-26 16:25:32,713 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | job 6898041229 has completed (purged errors)
[2025-11-26 16:26:40] 2025-11-26 16:25:32,717 | INFO     | overall cleanup function is called
[2025-11-26 16:26:40] 2025-11-26 16:25:33,723 | INFO     | --- collectZombieJob: --- 10, [923014]
[2025-11-26 16:26:40] 2025-11-26 16:25:33,723 | INFO     | zombie collector waiting for pid 923014
[2025-11-26 16:26:40] 2025-11-26 16:25:33,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:26:40] 2025-11-26 16:25:33,723 | INFO     | collected zombie processes
[2025-11-26 16:26:40] 2025-11-26 16:25:33,723 | INFO     | will attempt to kill all subprocesses of pid=923014
[2025-11-26 16:26:40] 2025-11-26 16:25:33,737 | INFO     | process IDs to be killed: [923014] (in reverse order)
[2025-11-26 16:26:40] 2025-11-26 16:25:33,746 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:26:40] 2025-11-26 16:25:33,746 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:26:40] 2025-11-26 16:25:33,747 | INFO     | did not find any defunct processes belonging to 923014
[2025-11-26 16:26:40] 2025-11-26 16:25:33,747 | INFO     | did not find any defunct processes belonging to 923014
[2025-11-26 16:26:40] 2025-11-26 16:25:33,747 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:26:40] 2025-11-26 16:25:33,747 | INFO     | ready for new job
[2025-11-26 16:26:40] 2025-11-26 16:25:33,747 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:26:40] 2025-11-26 16:25:33,748 | INFO     | ***************************************
[2025-11-26 16:26:40] 2025-11-26 16:25:33,748 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:26:40] 2025-11-26 16:25:33,748 | INFO     | ***************************************
[2025-11-26 16:26:40] 2025-11-26 16:25:33,748 | INFO     | 
[2025-11-26 16:26:40] 2025-11-26 16:25:33,748 | INFO     | pilot is running in a VM
[2025-11-26 16:26:40] 2025-11-26 16:25:33,748 | INFO     | architecture information:
[2025-11-26 16:26:40] 2025-11-26 16:25:33,748 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:26:40] 2025-11-26 16:25:33,750 | INFO     | cat /etc/os-release:
[2025-11-26 16:26:40] NAME="CentOS Linux"
[2025-11-26 16:26:40] VERSION="7 (Core)"
[2025-11-26 16:26:40] ID="centos"
[2025-11-26 16:26:40] ID_LIKE="rhel fedora"
[2025-11-26 16:26:40] VERSION_ID="7"
[2025-11-26 16:26:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:26:40] ANSI_COLOR="0;31"
[2025-11-26 16:26:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:26:40] HOME_URL="https://www.centos.org/"
[2025-11-26 16:26:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:26:40] 
[2025-11-26 16:26:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:26:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:26:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:26:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:26:40] 
[2025-11-26 16:26:40] 2025-11-26 16:25:33,750 | INFO     | ***************************************
[2025-11-26 16:26:40] 2025-11-26 16:25:34,253 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-26 16:26:40] 2025-11-26 16:25:34,258 | INFO     | sufficient remaining disk space (72542584832 B)
[2025-11-26 16:26:40] 2025-11-26 16:25:34,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:26:40] 2025-11-26 16:25:34,258 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:26:40] 2025-11-26 16:25:34,258 | INFO     | update_server=False
[2025-11-26 16:26:40] 2025-11-26 16:25:34,258 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:26:40] 2025-11-26 16:25:34,258 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:26:40] 2025-11-26 16:25:34,258 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:26:40] 2025-11-26 16:25:34,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:26:40] 2025-11-26 16:25:34,258 | INFO     | aborting loop
[2025-11-26 16:26:40] 2025-11-26 16:25:34,259 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 16:26:40] 2025-11-26 16:25:34,259 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:26:40] 2025-11-26 16:25:34,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:26:40] 2025-11-26 16:25:34,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:26:40] 2025-11-26 16:25:35,264 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:35,264 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:35,264 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:35,300 | INFO     | all payload control threads have been joined
[2025-11-26 16:26:40] 2025-11-26 16:25:35,326 | INFO     | all data control threads have been joined
[2025-11-26 16:26:40] 2025-11-26 16:25:35,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:26:40] 2025-11-26 16:25:35,728 | INFO     | all job control threads have been joined
[2025-11-26 16:26:40] 2025-11-26 16:25:35,811 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:35,849 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:35,862 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:36,306 | INFO     | [payload] control thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:36,332 | INFO     | [data] control thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:36,471 | INFO     | [job] validate thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:36,503 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:36,534 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:36,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:36,734 | INFO     | [job] control thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:36,851 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:37,367 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:25:38,265 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:26:40] 2025-11-26 16:26:33,410 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:26:40] 2025-11-26 16:26:35,044 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127021976098624)>', '<ExcThread(monitor, started 127021493507840)>']
[2025-11-26 16:26:40] 2025-11-26 16:26:35,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:26:40] 2025-11-26 16:26:35,570 | INFO     | [monitor] control thread has ended
[2025-11-26 16:26:40] 2025-11-26 16:26:40,069 | INFO     | all workflow threads have been joined
[2025-11-26 16:26:40] 2025-11-26 16:26:40,069 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:26:40] 2025-11-26 16:26:40,069 | INFO     | traces error code: 0
[2025-11-26 16:26:40] 2025-11-26 16:26:40,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:26:40] 2025-11-26 16:26:40,094 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:26:40] 2025-11-26 16:26:40,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:26:40] 2025-11-26 16:26:40,096 [wrapper] pilotpid: 916358
[2025-11-26 16:26:40] 2025-11-26 16:26:40,097 [wrapper] Pilot exit status: 0
[2025-11-26 16:26:40] 2025-11-26 16:26:40,099 [wrapper] pandaids: 6898041229
[2025-11-26 16:26:40] 2025-11-26 16:26:40,105 [wrapper] cleanup supervisor_pilot  916364 916359
[2025-11-26 16:26:40] 2025-11-26 16:26:40,106 [wrapper] Test setup, not cleaning
[2025-11-26 16:26:40] 2025-11-26 16:26:40,106 [wrapper] apfmon messages muted
[2025-11-26 16:26:40] 2025-11-26 16:26:40,107 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:26:40] 2025-11-26 16:26:40,108 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:26:40]  *** Error codes and diagnostics ***
[2025-11-26 16:26:40]     "exeErrorCode": 65,
[2025-11-26 16:26:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"DetectorStore       FATAL in sysInitialize(): standard std::exception is caught\"",
[2025-11-26 16:26:40]     "pilotErrorCode": 1305,
[2025-11-26 16:26:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"DetectorStore       FATAL in sysInitialize(): standard std:exception is caught\"",
[2025-11-26 16:26:40]  *** Listing of results directory ***
[2025-11-26 16:26:40] total 403160
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc    576529 Nov 26 02:38 pilot3.tar.gz
[2025-11-26 16:26:40] -rwx------ 1 boinc boinc     36292 Nov 26 03:10 runpilot2-wrapper.sh
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc      5112 Nov 26 03:10 queuedata.json
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc       100 Nov 26 16:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:26:40] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 16:22 run_atlas
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc       105 Nov 26 16:22 job.xml
[2025-11-26 16:26:40] -rw-r--r-- 2 boinc boinc     15847 Nov 26 16:22 start_atlas.sh
[2025-11-26 16:26:40] drwxrwx--x 2 boinc boinc      4096 Nov 26 16:22 shared
[2025-11-26 16:26:40] -rw-r--r-- 2 boinc boinc    590101 Nov 26 16:22 input.tar.gz
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc      6943 Nov 26 16:22 init_data.xml
[2025-11-26 16:26:40] -rw-r--r-- 2 boinc boinc 408638884 Nov 26 16:22 EVNT.47483658._002415.pool.root.1
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc         0 Nov 26 16:22 boinc_lockfile
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc      2785 Nov 26 16:22 pandaJob.out
[2025-11-26 16:26:40] -rw------- 1 boinc boinc    991545 Nov 26 16:22 agis_schedconf.cvmfs.json
[2025-11-26 16:26:40] -rw------- 1 boinc boinc   1516240 Nov 26 16:22 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:26:40] drwx------ 5 boinc boinc      4096 Nov 26 16:22 pilot3
[2025-11-26 16:26:40] -rw------- 1 boinc boinc       961 Nov 26 16:23 memory_monitor_summary.json
[2025-11-26 16:26:40] -rw------- 1 boinc boinc     46702 Nov 26 16:23 log.47556161._003980.job.log.tgz.1
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc       522 Nov 26 16:23 boinc_task_state.xml
[2025-11-26 16:26:40] -rw------- 1 boinc boinc        95 Nov 26 16:25 pilot_heartbeat.json
[2025-11-26 16:26:40] -rw------- 1 boinc boinc      9907 Nov 26 16:25 heartbeat.json
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc        22 Nov 26 16:26 wrapper_checkpoint.txt
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc      8192 Nov 26 16:26 boinc_mmap_file
[2025-11-26 16:26:40] -rw------- 1 boinc boinc      4621 Nov 26 16:26 pilotlog.txt
[2025-11-26 16:26:40] -rw------- 1 boinc boinc     90828 Nov 26 16:26 log.47556161._003980.job.log.1
[2025-11-26 16:26:40] -rw------- 1 boinc boinc       186 Nov 26 16:26 output.list
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc       620 Nov 26 16:26 runtime_log
[2025-11-26 16:26:40] -rw------- 1 boinc boinc    163840 Nov 26 16:26 result.tar.gz
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc      8737 Nov 26 16:26 runtime_log.err
[2025-11-26 16:26:40] -rw------- 1 boinc boinc       628 Nov 26 16:26 2rRKDmj6Ki8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5pJKDmDR2Bxn.diag
[2025-11-26 16:26:40] -rw-r--r-- 1 boinc boinc     22332 Nov 26 16:26 stderr.txt
[2025-11-26 16:26:40] No HITS result produced
[2025-11-26 16:26:40]  *** Contents of shared directory: ***
[2025-11-26 16:26:40] total 399824
[2025-11-26 16:26:40] -rw-r--r-- 2 boinc boinc     15847 Nov 26 16:22 start_atlas.sh
[2025-11-26 16:26:40] -rw-r--r-- 2 boinc boinc    590101 Nov 26 16:22 input.tar.gz
[2025-11-26 16:26:40] -rw-r--r-- 2 boinc boinc 408638884 Nov 26 16:22 ATLAS.root_0
[2025-11-26 16:26:40] -rw------- 1 boinc boinc    163840 Nov 26 16:26 result.tar.gz
16:26:41 (912506): run_atlas exited; CPU time 12.489366
16:26:41 (912506): called boinc_finish(0)

</stderr_txt>
]]>

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