Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:27:29 (976134): wrapper (7.7.26015): starting
14:27:29 (976134): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 14:27:29] Arguments: --nthreads 8
[2025-11-26 14:27:29] Threads: 8
[2025-11-26 14:27:29] Checking for CVMFS
[2025-11-26 14:27:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 14:27:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 14:27:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 14:27:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 14:27:31] 2.13.3.0 7489 30469 382716 153333 2 766 20534725 32935937 29025 16776704 0 195727338 99.635 191609766 40779 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 14:27:31] CVMFS is ok
[2025-11-26 14:27:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 14:27:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 14:27:31] Further information can be found at the LHC@home message board.
[2025-11-26 14:27:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 14:27:31] Checking for apptainer binary...
[2025-11-26 14:27:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 14:27:31] Running /usr/bin/apptainer --version
[2025-11-26 14:27:31] apptainer version 1.4.4-1.el9
[2025-11-26 14:27:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 14:27:32] c7-13-32.aglt2.org
[2025-11-26 14:27:32] apptainer works
[2025-11-26 14:27:32] Set ATHENA_PROC_NUMBER=8
[2025-11-26 14:27:32] Set ATHENA_CORE_NUMBER=8
[2025-11-26 14:27:32] Starting ATLAS job with PandaID=6896990415
[2025-11-26 14:27:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:34:03]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:34:03] 2025-11-27 12:33:27,461 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:34:03] 2025-11-27 12:33:27,463 | INFO     | sum of square deviations: 316632662641.142
[2025-11-27 07:34:03] 2025-11-27 12:33:27,510 | INFO     | sum of deviations: 2851666148374.819
[2025-11-27 07:34:03] 2025-11-27 12:33:27,510 | INFO     | mean x: 1764216046.1539226
[2025-11-27 07:34:03] 2025-11-27 12:33:27,510 | INFO     | mean y: 2918034.3495531282
[2025-11-27 07:34:03] 2025-11-27 12:33:27,510 | INFO     | intersect: -15886015012.771608
[2025-11-27 07:34:03] 2025-11-27 12:33:27,511 | INFO     | chi2: 9.696598516907308
[2025-11-27 07:34:03] 2025-11-27 12:33:27,512 | INFO     | sum of square deviations: 311939803466.9509
[2025-11-27 07:34:03] 2025-11-27 12:33:27,538 | INFO     | sum of deviations: 3164175570947.338
[2025-11-27 07:34:03] 2025-11-27 12:33:27,538 | INFO     | mean x: 1764215893.6596806
[2025-11-27 07:34:03] 2025-11-27 12:33:27,538 | INFO     | mean y: 2928186.619760479
[2025-11-27 07:34:03] 2025-11-27 12:33:27,538 | INFO     | intersect: -17892475896.32349
[2025-11-27 07:34:03] 2025-11-27 12:33:27,539 | INFO     | chi2: 6.911848591690539
[2025-11-27 07:34:03] 2025-11-27 12:33:27,539 | INFO     | current chi2=6.911848591690539 (change=28.718832901673586 %)
[2025-11-27 07:34:03] 2025-11-27 12:33:27,540 | INFO     | sum of square deviations: 307293305579.001
[2025-11-27 07:34:03] 2025-11-27 12:33:27,640 | INFO     | sum of deviations: 3149655504759.108
[2025-11-27 07:34:03] 2025-11-27 12:33:27,640 | INFO     | mean x: 1764215741.1614845
[2025-11-27 07:34:03] 2025-11-27 12:33:27,640 | INFO     | mean y: 2927707.7632898698
[2025-11-27 07:34:03] 2025-11-27 12:33:27,640 | INFO     | intersect: -18079704487.110195
[2025-11-27 07:34:03] 2025-11-27 12:33:27,641 | INFO     | chi2: 6.87004582691283
[2025-11-27 07:34:03] 2025-11-27 12:33:27,641 | INFO     | current chi2=6.87004582691283 (change=0.6047986182446875 %)
[2025-11-27 07:34:03] 2025-11-27 12:33:27,641 | INFO     | right removable region: 996
[2025-11-27 07:34:03] 2025-11-27 12:33:27,642 | INFO     | sum of square deviations: 311939094646.9514
[2025-11-27 07:34:03] 2025-11-27 12:33:27,697 | INFO     | sum of deviations: 2454596584988.4126
[2025-11-27 07:34:03] 2025-11-27 12:33:27,697 | INFO     | mean x: 1764216198.6596806
[2025-11-27 07:34:03] 2025-11-27 12:33:27,698 | INFO     | mean y: 2930934.6786427144
[2025-11-27 07:34:03] 2025-11-27 12:33:27,698 | INFO     | intersect: -13879391386.3258
[2025-11-27 07:34:03] 2025-11-27 12:33:27,699 | INFO     | chi2: 5.761125349286198
[2025-11-27 07:34:03] 2025-11-27 12:33:27,699 | INFO     | current chi2=5.761125349286198 (change=40.5861205943413 %)
[2025-11-27 07:34:03] 2025-11-27 12:33:27,700 | INFO     | sum of square deviations: 307292132177.69305
[2025-11-27 07:34:03] 2025-11-27 12:33:27,734 | INFO     | sum of deviations: 2142816771731.0076
[2025-11-27 07:34:03] 2025-11-27 12:33:27,779 | INFO     | mean x: 1764216351.1654966
[2025-11-27 07:34:03] 2025-11-27 12:33:27,779 | INFO     | mean y: 2941162.2908726176
[2025-11-27 07:34:03] 2025-11-27 12:33:27,779 | INFO     | intersect: -12299334068.281832
[2025-11-27 07:34:03] 2025-11-27 12:33:27,780 | INFO     | chi2: 3.4470284775636677
[2025-11-27 07:34:03] 2025-11-27 12:33:27,781 | INFO     | current chi2=3.4470284775636677 (change=40.167445271942334 %)
[2025-11-27 07:34:03] 2025-11-27 12:33:27,781 | INFO     | sum of square deviations: 302691724759.8861
[2025-11-27 07:34:03] 2025-11-27 12:33:27,858 | INFO     | sum of deviations: 2013267700961.7366
[2025-11-27 07:34:03] 2025-11-27 12:33:27,858 | INFO     | mean x: 1764216503.668347
[2025-11-27 07:34:03] 2025-11-27 12:33:27,858 | INFO     | mean y: 2945451.1572580645
[2025-11-27 07:34:03] 2025-11-27 12:33:27,859 | INFO     | intersect: -11731237593.181553
[2025-11-27 07:34:03] 2025-11-27 12:33:27,859 | INFO     | chi2: 3.055496057142224
[2025-11-27 07:34:03] 2025-11-27 12:33:27,860 | INFO     | current chi2=3.055496057142224 (change=11.358549050867595 %)
[2025-11-27 07:34:03] 2025-11-27 12:33:27,860 | INFO     | left removable region: 30
[2025-11-27 07:34:03] 2025-11-27 12:33:27,865 | INFO     | sum of square deviations: 279509593855.93414
[2025-11-27 07:34:03] 2025-11-27 12:33:27,951 | INFO     | sum of deviations: 2150474460202.4736
[2025-11-27 07:34:03] 2025-11-27 12:33:27,951 | INFO     | mean x: 1764216625.6749482
[2025-11-27 07:34:03] 2025-11-27 12:33:27,951 | INFO     | mean y: 2960877.023809524
[2025-11-27 07:34:03] 2025-11-27 12:33:27,951 | INFO     | intersect: -13570465149.03965
[2025-11-27 07:34:03] 2025-11-27 12:33:27,952 | INFO     | chi2: 0.13108609029323523
[2025-11-27 07:34:03] 2025-11-27 12:33:27,989 | INFO     | current memory leak: 7.69 B/s (using 966 data points, chi2=0.13)
[2025-11-27 07:34:03] 2025-11-27 12:33:27,990 | INFO     | could have reported an average CPU frequency of 3290 MHz (37 samples)
[2025-11-27 07:34:03] 2025-11-27 12:33:27,991 | INFO     | ..............................
[2025-11-27 07:34:03] 2025-11-27 12:33:27,991 | INFO     | . Timing measurements:
[2025-11-27 07:34:03] 2025-11-27 12:33:27,991 | INFO     | . get job = 0 s
[2025-11-27 07:34:03] 2025-11-27 12:33:27,991 | INFO     | . initial setup = 4 s
[2025-11-27 07:34:03] 2025-11-27 12:33:27,991 | INFO     | . payload setup = 17 s
[2025-11-27 07:34:03] 2025-11-27 12:33:27,991 | INFO     | . stage-in = 0 s
[2025-11-27 07:34:03] 2025-11-27 12:33:27,991 | INFO     | . payload execution = 61438 s
[2025-11-27 07:34:03] 2025-11-27 12:33:27,991 | INFO     | . stage-out = 6 s
[2025-11-27 07:34:03] 2025-11-27 12:33:27,991 | INFO     | . log creation = 1 s
[2025-11-27 07:34:03] 2025-11-27 12:33:27,991 | INFO     | ..............................
[2025-11-27 07:34:03] 2025-11-27 12:33:29,048 | INFO     | 
[2025-11-27 07:34:03] 2025-11-27 12:33:29,048 | INFO     | job summary report
[2025-11-27 07:34:03] 2025-11-27 12:33:29,048 | INFO     | --------------------------------------------------
[2025-11-27 07:34:03] 2025-11-27 12:33:29,050 | INFO     | PanDA job id: 6896990415
[2025-11-27 07:34:03] 2025-11-27 12:33:29,050 | INFO     | task id: 47556161
[2025-11-27 07:34:03] 2025-11-27 12:33:29,050 | INFO     | errors: (none)
[2025-11-27 07:34:03] 2025-11-27 12:33:29,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:34:03] 2025-11-27 12:33:29,050 | INFO     | pilot state: finished 
[2025-11-27 07:34:03] 2025-11-27 12:33:29,050 | INFO     | transexitcode: 0
[2025-11-27 07:34:03] 2025-11-27 12:33:29,050 | INFO     | exeerrorcode: 0
[2025-11-27 07:34:03] 2025-11-27 12:33:29,050 | INFO     | exeerrordiag: 
[2025-11-27 07:34:03] 2025-11-27 12:33:29,050 | INFO     | exitcode: 0
[2025-11-27 07:34:03] 2025-11-27 12:33:29,051 | INFO     | exitmsg: OK
[2025-11-27 07:34:03] 2025-11-27 12:33:29,051 | INFO     | cpuconsumptiontime: 198274 s
[2025-11-27 07:34:03] 2025-11-27 12:33:29,051 | INFO     | nevents: 1000
[2025-11-27 07:34:03] 2025-11-27 12:33:29,051 | INFO     | neventsw: 0
[2025-11-27 07:34:03] 2025-11-27 12:33:29,051 | INFO     | pid: 988328
[2025-11-27 07:34:03] 2025-11-27 12:33:29,051 | INFO     | pgrp: 988328
[2025-11-27 07:34:03] 2025-11-27 12:33:29,055 | INFO     | corecount: 8
[2025-11-27 07:34:03] 2025-11-27 12:33:29,055 | INFO     | event service: False
[2025-11-27 07:34:03] 2025-11-27 12:33:29,055 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 15: 2284583, 23: 2284611, 61461: 2337921, 61468: 2346971, 61478: 2347161}
[2025-11-27 07:34:03] 2025-11-27 12:33:29,055 | INFO     | --------------------------------------------------
[2025-11-27 07:34:03] 2025-11-27 12:33:29,055 | INFO     | 
[2025-11-27 07:34:03] 2025-11-27 12:33:29,055 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 07:34:03] 2025-11-27 12:33:29,134 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:34:03] 2025-11-27 12:33:29,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:34:03] 2025-11-27 12:33:29,136 | INFO     | job 6896990415 has completed (purged errors)
[2025-11-27 07:34:03] 2025-11-27 12:33:29,136 | INFO     | overall cleanup function is called
[2025-11-27 07:34:03] 2025-11-27 12:33:29,333 | INFO     | PID=980598 has CPU usage=17.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:34:03] 2025-11-27 12:33:29,333 | INFO     | .. there are 41 such processes running
[2025-11-27 07:34:03] 2025-11-27 12:33:30,190 | INFO     | --- collectZombieJob: --- 10, [988328]
[2025-11-27 07:34:03] 2025-11-27 12:33:30,191 | INFO     | zombie collector waiting for pid 988328
[2025-11-27 07:34:03] 2025-11-27 12:33:30,191 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:34:03] 2025-11-27 12:33:30,191 | INFO     | collected zombie processes
[2025-11-27 07:34:03] 2025-11-27 12:33:30,191 | INFO     | will attempt to kill all subprocesses of pid=988328
[2025-11-27 07:34:03] 2025-11-27 12:33:31,634 | INFO     | process IDs to be killed: [988328] (in reverse order)
[2025-11-27 07:34:03] 2025-11-27 12:33:31,869 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:34:03] 2025-11-27 12:33:31,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:34:03] 2025-11-27 12:33:31,892 | INFO     | did not find any defunct processes belonging to 988328
[2025-11-27 07:34:03] 2025-11-27 12:33:31,914 | INFO     | did not find any defunct processes belonging to 988328
[2025-11-27 07:34:03] 2025-11-27 12:33:31,915 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:34:03] 2025-11-27 12:33:31,916 | INFO     | ready for new job
[2025-11-27 07:34:03] 2025-11-27 12:33:31,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:34:03] 2025-11-27 12:33:31,922 | INFO     | ***************************************
[2025-11-27 07:34:03] 2025-11-27 12:33:31,922 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:34:03] 2025-11-27 12:33:31,922 | INFO     | ***************************************
[2025-11-27 07:34:03] 2025-11-27 12:33:31,922 | INFO     | 
[2025-11-27 07:34:03] 2025-11-27 12:33:31,925 | INFO     | architecture information:
[2025-11-27 07:34:03] 2025-11-27 12:33:31,926 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:34:03] 2025-11-27 12:33:31,957 | INFO     | cat /etc/os-release:
[2025-11-27 07:34:03] NAME="CentOS Linux"
[2025-11-27 07:34:03] VERSION="7 (Core)"
[2025-11-27 07:34:03] ID="centos"
[2025-11-27 07:34:03] ID_LIKE="rhel fedora"
[2025-11-27 07:34:03] VERSION_ID="7"
[2025-11-27 07:34:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:34:03] ANSI_COLOR="0;31"
[2025-11-27 07:34:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:34:03] HOME_URL="https://www.centos.org/"
[2025-11-27 07:34:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:34:03] 
[2025-11-27 07:34:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:34:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:34:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:34:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:34:03] 
[2025-11-27 07:34:03] 2025-11-27 12:33:31,957 | INFO     | ***************************************
[2025-11-27 07:34:03] 2025-11-27 12:33:32,460 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 07:34:03] 2025-11-27 12:33:32,488 | INFO     | sufficient remaining disk space (90462748672 B)
[2025-11-27 07:34:03] 2025-11-27 12:33:32,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:34:03] 2025-11-27 12:33:32,489 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:34:03] 2025-11-27 12:33:32,489 | INFO     | update_server=False
[2025-11-27 07:34:03] 2025-11-27 12:33:32,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:34:03] 2025-11-27 12:33:32,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:34:03] 2025-11-27 12:33:32,954 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:34:03] 2025-11-27 12:33:32,954 | INFO     | aborting loop
[2025-11-27 07:34:03] 2025-11-27 12:33:33,221 | INFO     | all data control threads have been joined
[2025-11-27 07:34:03] 2025-11-27 12:33:33,243 | INFO     | all job control threads have been joined
[2025-11-27 07:34:03] 2025-11-27 12:33:33,441 | INFO     | all payload control threads have been joined
[2025-11-27 07:34:03] 2025-11-27 12:33:33,501 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:33,512 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:33,593 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:33,605 | INFO     | [job] validate thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:33,693 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:33,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:34:03] 2025-11-27 12:33:33,965 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:34,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:34:03] 2025-11-27 12:33:34,106 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:34,107 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:34,116 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:34,206 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:34,242 | INFO     | [data] control thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:34,251 | INFO     | [job] control thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:34,463 | INFO     | [payload] control thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:34,500 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:34,701 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:38,108 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:34:03] 2025-11-27 12:33:54,345 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:34:03] 2025-11-27 12:33:55,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139890746181440)>', '<ExcThread(monitor, started 139890398308096)>']
[2025-11-27 07:34:03] 2025-11-27 12:34:00,506 | INFO     | all workflow threads have been joined
[2025-11-27 07:34:03] 2025-11-27 12:34:00,506 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:34:03] 2025-11-27 12:34:00,507 | INFO     | traces error code: 0
[2025-11-27 07:34:03] 2025-11-27 12:34:00,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:34:03] 2025-11-27 12:34:02,145 | INFO     | PID=980598 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 07:34:03] 2025-11-27 12:34:02,145 | INFO     | .. there are 41 such processes running
[2025-11-27 07:34:03] 2025-11-27 12:34:02,146 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:34:03] 2025-11-27 12:34:02,146 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:34:03] 2025-11-27 12:34:02,146 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:34:03] 2025-11-27 12:34:02,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:34:03] 2025-11-27 12:34:02,146 | INFO     | [monitor] control thread has ended
[2025-11-27 07:34:03] 2025-11-27 12:34:02,584 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:34:03] 2025-11-27 12:34:02,630 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:34:03] 2025-11-27 12:34:02,665 [wrapper] pilotpid: 980598
[2025-11-27 07:34:03] 2025-11-27 12:34:02,668 [wrapper] Pilot exit status: 0
[2025-11-27 07:34:03] 2025-11-27 12:34:02,735 [wrapper] pandaids: 6896990415
[2025-11-27 07:34:03] 2025-11-27 12:34:02,859 [wrapper] cleanup supervisor_pilot 1297984 980599
[2025-11-27 07:34:03] 2025-11-27 12:34:02,865 [wrapper] Test setup, not cleaning
[2025-11-27 07:34:03] 2025-11-27 12:34:02,872 [wrapper] apfmon messages muted
[2025-11-27 07:34:03] 2025-11-27 12:34:02,876 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:34:03] 2025-11-27 12:34:02,882 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:34:03]  *** Error codes and diagnostics ***
[2025-11-27 07:34:03]     "exeErrorCode": 0,
[2025-11-27 07:34:03]     "exeErrorDiag": "",
[2025-11-27 07:34:03]     "pilotErrorCode": 0,
[2025-11-27 07:34:03]     "pilotErrorDiag": "",
[2025-11-27 07:34:03]  *** Listing of results directory ***
[2025-11-27 07:34:03] total 1326948
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 07:34:03] -rwx------. 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas       100 Nov 26 14:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:34:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 14:27 run_atlas
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas       105 Nov 26 14:27 job.xml
[2025-11-27 07:34:03] -rw-r--r--. 2 boincer umatlas 408829385 Nov 26 14:27 EVNT.47483658._002173.pool.root.1
[2025-11-27 07:34:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 14:27 shared
[2025-11-27 07:34:03] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 14:27 input.tar.gz
[2025-11-27 07:34:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 14:27 start_atlas.sh
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas         0 Nov 26 14:27 boinc_lockfile
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 14:27 pandaJob.out
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas        57 Nov 26 14:27 setup.sh.local
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas    991522 Nov 26 14:28 agis_schedconf.cvmfs.json
[2025-11-27 07:34:03] drwx------. 5 boincer umatlas      4096 Nov 26 14:28 pilot3
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas       533 Nov 27 07:26 boinc_task_state.xml
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas      6903 Nov 27 07:29 init_data.xml
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas 925542535 Nov 27 07:32 HITS.47556161._001564.pool.root.1
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas      1060 Nov 27 07:33 memory_monitor_summary.json
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas        95 Nov 27 07:33 pilot_heartbeat.json
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas   1516240 Nov 27 07:33 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas   2173574 Nov 27 07:33 log.47556161._001564.job.log.tgz.1
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas      8603 Nov 27 07:33 heartbeat.json
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:34 boinc_mmap_file
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas       822 Nov 27 07:34 pilotlog.txt
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas        29 Nov 27 07:34 wrapper_checkpoint.txt
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas   8079464 Nov 27 07:34 log.47556161._001564.job.log.1
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas       353 Nov 27 07:34 output.list
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas       620 Nov 27 07:34 runtime_log
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas  10270720 Nov 27 07:34 result.tar.gz
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas       664 Nov 27 07:34 TM7LDmSWBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6SMKDm05WYJn.diag
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 07:34 runtime_log.err
[2025-11-27 07:34:03] -rw-r--r--. 1 boincer umatlas     21230 Nov 27 07:34 stderr.txt
[2025-11-27 07:34:03] HITS file was successfully produced:
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas 925542535 Nov 27 07:32 shared/HITS.pool.root.1
[2025-11-27 07:34:03]  *** Contents of shared directory: ***
[2025-11-27 07:34:03] total 1313736
[2025-11-27 07:34:03] -rw-r--r--. 2 boincer umatlas 408829385 Nov 26 14:27 ATLAS.root_0
[2025-11-27 07:34:03] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 14:27 input.tar.gz
[2025-11-27 07:34:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 14:27 start_atlas.sh
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas 925542535 Nov 27 07:32 HITS.pool.root.1
[2025-11-27 07:34:03] -rw-------. 1 boincer umatlas  10270720 Nov 27 07:34 result.tar.gz
07:34:04 (976134): run_atlas exited; CPU time 198572.690609
07:34:04 (976134): called boinc_finish(0)

</stderr_txt>
]]>

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