Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:46:49 (704116): wrapper (7.7.26015): starting
11:46:49 (704116): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 11:46:49] Arguments: --nthreads 8
[2025-11-26 11:46:49] Threads: 8
[2025-11-26 11:46:49] Checking for CVMFS
[2025-11-26 11:46:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:46:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:46:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:46:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:46:52] 2.13.3.0 22787 30258 243664 153328 1 959 31208328 40960000 54195 16776704 0 437810248 99.755 257775774 48260 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 11:46:52] CVMFS is ok
[2025-11-26 11:46:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:46:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:46:52] Further information can be found at the LHC@home message board.
[2025-11-26 11:46:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:46:52] Checking for apptainer binary...
[2025-11-26 11:46:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:46:52] Running /usr/bin/apptainer --version
[2025-11-26 11:46:52] apptainer version 1.4.4-1.el9
[2025-11-26 11:46:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:46:52] c8-6-11.aglt2.org
[2025-11-26 11:46:52] apptainer works
[2025-11-26 11:46:52] Set ATHENA_PROC_NUMBER=8
[2025-11-26 11:46:52] Set ATHENA_CORE_NUMBER=8
[2025-11-26 11:46:52] Starting ATLAS job with PandaID=6891584312
[2025-11-26 11:46:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:53:23]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:53:23] 2025-11-27 02:52:25,521 | INFO     | monitor loop #2044: job 0:6891584312 is in state 'finished'
[2025-11-26 21:53:23] 2025-11-27 02:52:25,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:53:23] 2025-11-27 02:52:27,258 | INFO     | time since job start (36257s) is within the limit (172800.0s)
[2025-11-26 21:53:23] 2025-11-27 02:52:28,045 | INFO     | monitor loop #2045: job 0:6891584312 is in state 'finished'
[2025-11-26 21:53:23] 2025-11-27 02:52:28,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:53:23] 2025-11-27 02:52:29,267 | INFO     | time since job start (36259s) is within the limit (172800.0s)
[2025-11-26 21:53:23] 2025-11-27 02:52:30,550 | INFO     | monitor loop #2046: job 0:6891584312 is in state 'finished'
[2025-11-26 21:53:23] 2025-11-27 02:52:30,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:53:23] 2025-11-27 02:52:31,274 | INFO     | time since job start (36261s) is within the limit (172800.0s)
[2025-11-26 21:53:23] 2025-11-27 02:52:33,058 | INFO     | monitor loop #2047: job 0:6891584312 is in state 'finished'
[2025-11-26 21:53:23] 2025-11-27 02:52:33,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:53:23] 2025-11-27 02:52:33,291 | INFO     | time since job start (36263s) is within the limit (172800.0s)
[2025-11-26 21:53:23] 2025-11-27 02:52:35,298 | INFO     | time since job start (36265s) is within the limit (172800.0s)
[2025-11-26 21:53:23] 2025-11-27 02:52:35,565 | INFO     | monitor loop #2048: job 0:6891584312 is in state 'finished'
[2025-11-26 21:53:23] 2025-11-27 02:52:35,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:53:23] 2025-11-27 02:52:35,749 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 21:53:23] 2025-11-27 02:52:35,757 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1150624999996
[2025-11-26 21:53:23] 2025-11-27 02:52:35,778 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6891584312/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:53:23] 2025-11-27 02:52:35,778 | INFO     | extracted standard info from prmon json
[2025-11-26 21:53:23] 2025-11-27 02:52:35,778 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:53:23] 2025-11-27 02:52:35,778 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:53:23] 2025-11-27 02:52:35,791 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:53:23] 2025-11-27 02:52:35,792 | INFO     | sum of square deviations: 64332823907.93898
[2025-11-26 21:53:23] 2025-11-27 02:52:35,801 | INFO     | sum of deviations: 546989823645.84717
[2025-11-26 21:53:23] 2025-11-27 02:52:35,801 | INFO     | mean x: 1764193865.7601352
[2025-11-26 21:53:23] 2025-11-27 02:52:35,801 | INFO     | mean y: 2717259.4003378376
[2025-11-26 21:53:23] 2025-11-27 02:52:35,801 | INFO     | intersect: -14997340765.258154
[2025-11-26 21:53:23] 2025-11-27 02:52:35,801 | INFO     | chi2: 30.37165688147644
[2025-11-26 21:53:23] 2025-11-27 02:52:35,821 | INFO     | sum of square deviations: 62716686239.93165
[2025-11-26 21:53:23] 2025-11-27 02:52:35,825 | INFO     | sum of deviations: 741256912953.5891
[2025-11-26 21:53:23] 2025-11-27 02:52:35,826 | INFO     | mean x: 1764193713.2708688
[2025-11-26 21:53:23] 2025-11-27 02:52:35,842 | INFO     | mean y: 2735588.7069846676
[2025-11-26 21:53:23] 2025-11-27 02:52:35,842 | INFO     | intersect: -20848506148.594326
[2025-11-26 21:53:23] 2025-11-27 02:52:35,842 | INFO     | chi2: 26.658017461233825
[2025-11-26 21:53:23] 2025-11-27 02:52:35,842 | INFO     | current chi2=26.658017461233825 (change=12.22731915724871 %)
[2025-11-26 21:53:23] 2025-11-27 02:52:35,842 | INFO     | right removable region: 586
[2025-11-26 21:53:23] 2025-11-27 02:52:35,843 | INFO     | sum of square deviations: 62716231179.93166
[2025-11-26 21:53:23] 2025-11-27 02:52:35,849 | INFO     | sum of deviations: 310675449655.5686
[2025-11-26 21:53:23] 2025-11-27 02:52:35,850 | INFO     | mean x: 1764194018.2708688
[2025-11-26 21:53:23] 2025-11-27 02:52:35,850 | INFO     | mean y: 2739550.688245315
[2025-11-26 21:53:23] 2025-11-27 02:52:35,850 | INFO     | intersect: -8736493652.491674
[2025-11-26 21:53:23] 2025-11-27 02:52:35,850 | INFO     | chi2: 25.490392120060775
[2025-11-26 21:53:23] 2025-11-27 02:52:35,850 | INFO     | current chi2=25.490392120060775 (change=16.071776329044233 %)
[2025-11-26 21:53:23] 2025-11-27 02:52:35,850 | INFO     | left removable region: 10
[2025-11-26 21:53:23] 2025-11-27 02:52:35,850 | INFO     | sum of square deviations: 59256086988.41456
[2025-11-26 21:53:23] 2025-11-27 02:52:35,855 | INFO     | sum of deviations: 334932952871.0886
[2025-11-26 21:53:23] 2025-11-27 02:52:35,855 | INFO     | mean x: 1764193987.7934027
[2025-11-26 21:53:23] 2025-11-27 02:52:35,855 | INFO     | mean y: 2782625.2864583335
[2025-11-26 21:53:23] 2025-11-27 02:52:35,855 | INFO     | intersect: -9968964275.32466
[2025-11-26 21:53:23] 2025-11-27 02:52:35,855 | INFO     | chi2: 17.218075243445643
[2025-11-26 21:53:23] 2025-11-27 02:52:35,855 | INFO     | current memory leak: 5.65 B/s (using 576 data points, chi2=17.22)
[2025-11-26 21:53:23] 2025-11-27 02:52:35,856 | INFO     | could have reported an average CPU frequency of 3798 MHz (23 samples)
[2025-11-26 21:53:23] 2025-11-27 02:52:35,856 | INFO     | ..............................
[2025-11-26 21:53:23] 2025-11-27 02:52:35,856 | INFO     | . Timing measurements:
[2025-11-26 21:53:23] 2025-11-27 02:52:35,856 | INFO     | . get job = 0 s
[2025-11-26 21:53:23] 2025-11-27 02:52:35,856 | INFO     | . initial setup = 5 s
[2025-11-26 21:53:23] 2025-11-27 02:52:35,856 | INFO     | . payload setup = 49 s
[2025-11-26 21:53:23] 2025-11-27 02:52:35,856 | INFO     | . stage-in = 0 s
[2025-11-26 21:53:23] 2025-11-27 02:52:35,856 | INFO     | . payload execution = 36108 s
[2025-11-26 21:53:23] 2025-11-27 02:52:35,856 | INFO     | . stage-out = 6 s
[2025-11-26 21:53:23] 2025-11-27 02:52:35,856 | INFO     | . log creation = 1 s
[2025-11-26 21:53:23] 2025-11-27 02:52:35,856 | INFO     | ..............................
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | 
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | job summary report
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | --------------------------------------------------
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | PanDA job id: 6891584312
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | task id: 47493068
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | errors: (none)
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | pilot state: finished 
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | transexitcode: 0
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | exeerrorcode: 0
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | exeerrordiag: 
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | exitcode: 0
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | exitmsg: OK
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | cpuconsumptiontime: 139323 s
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | nevents: 1000
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | neventsw: 0
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | pid: 731922
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | pgrp: 731922
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | corecount: 8
[2025-11-26 21:53:23] 2025-11-27 02:52:36,098 | INFO     | event service: False
[2025-11-26 21:53:23] 2025-11-27 02:52:36,099 | INFO     | sizes: {0: 2284305, 11: 2284305, 22: 2284333, 32: 2284651, 36160: 2325658, 36167: 2334654, 36169: 2334838, 36201: 2335084}
[2025-11-26 21:53:23] 2025-11-27 02:52:36,099 | INFO     | --------------------------------------------------
[2025-11-26 21:53:23] 2025-11-27 02:52:36,099 | INFO     | 
[2025-11-26 21:53:23] 2025-11-27 02:52:36,099 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-11-26 21:53:23] 2025-11-27 02:52:36,213 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,213 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,213 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,213 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,213 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,213 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,213 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,213 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,213 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,213 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,213 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,214 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,214 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,214 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,214 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,214 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,214 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,214 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:53:23] 2025-11-27 02:52:36,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,214 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:53:23] 2025-11-27 02:52:36,214 | INFO     | job 6891584312 has completed (purged errors)
[2025-11-26 21:53:23] 2025-11-27 02:52:36,214 | INFO     | overall cleanup function is called
[2025-11-26 21:53:23] 2025-11-27 02:52:37,238 | INFO     | --- collectZombieJob: --- 10, [731922]
[2025-11-26 21:53:23] 2025-11-27 02:52:37,238 | INFO     | zombie collector waiting for pid 731922
[2025-11-26 21:53:23] 2025-11-27 02:52:37,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:53:23] 2025-11-27 02:52:37,238 | INFO     | collected zombie processes
[2025-11-26 21:53:23] 2025-11-27 02:52:37,238 | INFO     | will attempt to kill all subprocesses of pid=731922
[2025-11-26 21:53:23] 2025-11-27 02:52:38,937 | INFO     | process IDs to be killed: [731922] (in reverse order)
[2025-11-26 21:53:23] 2025-11-27 02:52:39,231 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:53:23] 2025-11-27 02:52:39,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:53:23] 2025-11-27 02:52:39,297 | INFO     | did not find any defunct processes belonging to 731922
[2025-11-26 21:53:23] 2025-11-27 02:52:39,446 | INFO     | did not find any defunct processes belonging to 731922
[2025-11-26 21:53:23] 2025-11-27 02:52:39,451 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:53:23] 2025-11-27 02:52:39,453 | INFO     | ready for new job
[2025-11-26 21:53:23] 2025-11-27 02:52:39,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:53:23] 2025-11-27 02:52:39,456 | INFO     | ***************************************
[2025-11-26 21:53:23] 2025-11-27 02:52:39,456 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:53:23] 2025-11-27 02:52:39,456 | INFO     | ***************************************
[2025-11-26 21:53:23] 2025-11-27 02:52:39,456 | INFO     | 
[2025-11-26 21:53:23] 2025-11-27 02:52:39,461 | INFO     | architecture information:
[2025-11-26 21:53:23] 2025-11-27 02:52:39,467 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:53:23] 2025-11-27 02:52:39,533 | INFO     | cat /etc/os-release:
[2025-11-26 21:53:23] NAME="CentOS Linux"
[2025-11-26 21:53:23] VERSION="7 (Core)"
[2025-11-26 21:53:23] ID="centos"
[2025-11-26 21:53:23] ID_LIKE="rhel fedora"
[2025-11-26 21:53:23] VERSION_ID="7"
[2025-11-26 21:53:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:53:23] ANSI_COLOR="0;31"
[2025-11-26 21:53:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:53:23] HOME_URL="https://www.centos.org/"
[2025-11-26 21:53:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:53:23] 
[2025-11-26 21:53:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:53:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:53:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:53:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:53:23] 
[2025-11-26 21:53:23] 2025-11-27 02:52:39,533 | INFO     | ***************************************
[2025-11-26 21:53:23] 2025-11-27 02:52:40,037 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-11-26 21:53:23] 2025-11-27 02:52:40,135 | INFO     | sufficient remaining disk space (159258771456 B)
[2025-11-26 21:53:23] 2025-11-27 02:52:40,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:53:23] 2025-11-27 02:52:40,135 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:53:23] 2025-11-27 02:52:40,135 | INFO     | update_server=False
[2025-11-26 21:53:23] 2025-11-27 02:52:40,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:53:23] 2025-11-27 02:52:40,264 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:53:23] 2025-11-27 02:52:40,600 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 21:53:23] 2025-11-27 02:52:40,600 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 21:53:23] 2025-11-27 02:52:40,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:53:23] 2025-11-27 02:52:40,600 | INFO     | will abort loop
[2025-11-26 21:53:23] 2025-11-27 02:52:40,659 | INFO     | all data control threads have been joined
[2025-11-26 21:53:23] 2025-11-27 02:52:40,992 | INFO     | all job control threads have been joined
[2025-11-26 21:53:23] 2025-11-27 02:52:41,117 | INFO     | all payload control threads have been joined
[2025-11-26 21:53:23] 2025-11-27 02:52:41,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:53:23] 2025-11-27 02:52:41,141 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:41,606 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:41,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:53:23] 2025-11-27 02:52:41,665 | INFO     | [data] control thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:41,990 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:41,998 | INFO     | [job] control thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:42,038 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:42,038 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:42,127 | INFO     | [payload] control thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:42,135 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:42,149 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:42,149 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:42,271 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:42,408 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:42,448 | INFO     | [job] validate thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:42,517 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:52:45,640 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:53:23] 2025-11-27 02:53:10,890 | INFO     | PID=715098 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 21:53:23] 2025-11-27 02:53:10,890 | INFO     | .. there are 75 such processes running
[2025-11-26 21:53:23] 2025-11-27 02:53:10,893 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:53:23] 2025-11-27 02:53:10,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:53:23] 2025-11-27 02:53:10,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:53:23] 2025-11-27 02:53:15,040 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:53:23] 2025-11-27 02:53:16,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140411259213632)>', '<ExcThread(monitor, started 140410886264576)>']
[2025-11-26 21:53:23] 2025-11-27 02:53:16,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:53:23] 2025-11-27 02:53:16,937 | INFO     | [monitor] control thread has ended
[2025-11-26 21:53:23] 2025-11-27 02:53:21,468 | INFO     | all workflow threads have been joined
[2025-11-26 21:53:23] 2025-11-27 02:53:21,468 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:53:23] 2025-11-27 02:53:21,468 | INFO     | traces error code: 0
[2025-11-26 21:53:23] 2025-11-27 02:53:21,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:53:23] 2025-11-27 02:53:21,722 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:53:23] 2025-11-27 02:53:21,752 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:53:23] 2025-11-27 02:53:21,778 [wrapper] pilotpid: 715098
[2025-11-26 21:53:23] 2025-11-27 02:53:21,796 [wrapper] Pilot exit status: 0
[2025-11-26 21:53:23] 2025-11-27 02:53:21,889 [wrapper] pandaids: 6891584312
[2025-11-26 21:53:23] 2025-11-27 02:53:22,432 [wrapper] cleanup supervisor_pilot 2125701 715099
[2025-11-26 21:53:23] 2025-11-27 02:53:22,453 [wrapper] Test setup, not cleaning
[2025-11-26 21:53:23] 2025-11-27 02:53:22,467 [wrapper] apfmon messages muted
[2025-11-26 21:53:23] 2025-11-27 02:53:22,472 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:53:23] 2025-11-27 02:53:22,522 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:53:23]  *** Error codes and diagnostics ***
[2025-11-26 21:53:23]     "exeErrorCode": 0,
[2025-11-26 21:53:23]     "exeErrorDiag": "",
[2025-11-26 21:53:23]     "pilotErrorCode": 0,
[2025-11-26 21:53:23]     "pilotErrorDiag": "",
[2025-11-26 21:53:23]  *** Listing of results directory ***
[2025-11-26 21:53:23] total 1306780
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 11:45 pilot3.tar.gz
[2025-11-26 21:53:23] -rwx------. 1 boincer umatlas     36292 Nov 18 12:15 runpilot2-wrapper.sh
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 12:15 queuedata.json
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas       100 Nov 26 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:53:23] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 11:46 run_atlas
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas       105 Nov 26 11:46 job.xml
[2025-11-26 21:53:23] -rw-r--r--. 2 boincer umatlas 407449453 Nov 26 11:46 EVNT.47493065._000456.pool.root.1
[2025-11-26 21:53:23] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 11:46 start_atlas.sh
[2025-11-26 21:53:23] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 11:46 shared
[2025-11-26 21:53:23] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 11:46 input.tar.gz
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas         0 Nov 26 11:46 boinc_lockfile
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 11:46 pandaJob.out
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas    991545 Nov 26 11:48 agis_schedconf.cvmfs.json
[2025-11-26 21:53:23] drwx------. 5 boincer umatlas      4096 Nov 26 11:48 pilot3
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas       533 Nov 26 21:25 boinc_task_state.xml
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas      7176 Nov 26 21:47 init_data.xml
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas 914284632 Nov 26 21:50 HITS.47493068._004555.pool.root.1
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas      1052 Nov 26 21:51 memory_monitor_summary.json
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:51 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas   1809359 Nov 26 21:52 log.47493068._004555.job.log.tgz.1
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas      8583 Nov 26 21:52 heartbeat.json
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas        95 Nov 26 21:53 pilot_heartbeat.json
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:53 boinc_mmap_file
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas        29 Nov 26 21:53 wrapper_checkpoint.txt
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas      5011 Nov 26 21:53 pilotlog.txt
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas   4437975 Nov 26 21:53 log.47493068._004555.job.log.1
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas       353 Nov 26 21:53 output.list
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:53 runtime_log
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas   6266880 Nov 26 21:53 result.tar.gz
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas      8713 Nov 26 21:53 runtime_log.err
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas       659 Nov 26 21:53 KiyLDm8Tef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbZFKDmd6GnUn.diag
[2025-11-26 21:53:23] -rw-r--r--. 1 boincer umatlas     21758 Nov 26 21:53 stderr.txt
[2025-11-26 21:53:23] HITS file was successfully produced:
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas 914284632 Nov 26 21:50 shared/HITS.pool.root.1
[2025-11-26 21:53:23]  *** Contents of shared directory: ***
[2025-11-26 21:53:23] total 1297480
[2025-11-26 21:53:23] -rw-r--r--. 2 boincer umatlas 407449453 Nov 26 11:46 ATLAS.root_0
[2025-11-26 21:53:23] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 11:46 start_atlas.sh
[2025-11-26 21:53:23] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 11:46 input.tar.gz
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas 914284632 Nov 26 21:50 HITS.pool.root.1
[2025-11-26 21:53:23] -rw-------. 1 boincer umatlas   6266880 Nov 26 21:53 result.tar.gz
21:53:25 (704116): run_atlas exited; CPU time 139936.026740
21:53:25 (704116): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN