Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:50:55 (31606): wrapper (7.7.26015): starting
10:50:55 (31606): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 10:50:55] Arguments: --nthreads 12
[2025-11-26 10:50:55] Threads: 12
[2025-11-26 10:50:55] Checking for CVMFS
[2025-11-26 10:50:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:50:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:50:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:50:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:50:56] 2.11.2.0 2979 287898 92568 153326 1 82 17273935 20275201 1 130560 1 128813734 99.975 16052577 13891 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 10:50:56] CVMFS is ok
[2025-11-26 10:50:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:50:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:50:56] Further information can be found at the LHC@home message board.
[2025-11-26 10:50:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:50:56] Checking for apptainer binary...
[2025-11-26 10:50:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:50:56] Running /usr/bin/apptainer --version
[2025-11-26 10:50:56] apptainer version 1.3.2-1.el7
[2025-11-26 10:50:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:50:57] c-205-21.aglt2.org
[2025-11-26 10:50:57] apptainer works
[2025-11-26 10:50:57] Set ATHENA_PROC_NUMBER=12
[2025-11-26 10:50:57] Set ATHENA_CORE_NUMBER=12
[2025-11-26 10:50:57] Starting ATLAS job with PandaID=6897139750
[2025-11-26 10:50:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:07:01]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:07:01] 2025-11-26 23:06:09,437 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1784.5833333333333
[2025-11-26 18:07:01] 2025-11-26 23:06:09,440 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897139750/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:07:01] 2025-11-26 23:06:09,440 | INFO     | extracted standard info from prmon json
[2025-11-26 18:07:01] 2025-11-26 23:06:09,441 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:07:01] 2025-11-26 23:06:09,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:07:01] 2025-11-26 23:06:09,448 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:07:01] 2025-11-26 23:06:09,448 | INFO     | sum of square deviations: 24311216956.6915
[2025-11-26 18:07:01] 2025-11-26 23:06:09,452 | INFO     | sum of deviations: 371951365062.55145
[2025-11-26 18:07:01] 2025-11-26 23:06:09,452 | INFO     | mean x: 1764185325.7383177
[2025-11-26 18:07:01] 2025-11-26 23:06:09,452 | INFO     | mean y: 3429571.7102803737
[2025-11-26 18:07:01] 2025-11-26 23:06:09,452 | INFO     | intersect: -26987861785.7171
[2025-11-26 18:07:01] 2025-11-26 23:06:09,453 | INFO     | chi2: 6.042800665311483
[2025-11-26 18:07:01] 2025-11-26 23:06:09,454 | INFO     | sum of square deviations: 23469129951.404194
[2025-11-26 18:07:01] 2025-11-26 23:06:09,457 | INFO     | sum of deviations: 537478118451.24133
[2025-11-26 18:07:01] 2025-11-26 23:06:09,458 | INFO     | mean x: 1764185173.2411346
[2025-11-26 18:07:01] 2025-11-26 23:06:09,458 | INFO     | mean y: 3459512.997635934
[2025-11-26 18:07:01] 2025-11-26 23:06:09,458 | INFO     | intersect: -40399015119.705536
[2025-11-26 18:07:01] 2025-11-26 23:06:09,458 | INFO     | chi2: 2.973157983777733
[2025-11-26 18:07:01] 2025-11-26 23:06:09,458 | INFO     | current chi2=2.973157983777733 (change=50.798344204119495 %)
[2025-11-26 18:07:01] 2025-11-26 23:06:09,459 | INFO     | sum of square deviations: 22646717733.610115
[2025-11-26 18:07:01] 2025-11-26 23:06:09,463 | INFO     | sum of deviations: 586909239164.3062
[2025-11-26 18:07:01] 2025-11-26 23:06:09,463 | INFO     | mean x: 1764185020.744019
[2025-11-26 18:07:01] 2025-11-26 23:06:09,463 | INFO     | mean y: 3468649.7224880382
[2025-11-26 18:07:01] 2025-11-26 23:06:09,463 | INFO     | intersect: -45716909042.50576
[2025-11-26 18:07:01] 2025-11-26 23:06:09,463 | INFO     | chi2: 2.529708588277918
[2025-11-26 18:07:01] 2025-11-26 23:06:09,464 | INFO     | current chi2=2.529708588277918 (change=14.91509694134594 %)
[2025-11-26 18:07:01] 2025-11-26 23:06:09,464 | INFO     | right removable region: 417
[2025-11-26 18:07:01] 2025-11-26 23:06:09,464 | INFO     | sum of square deviations: 23469067731.404194
[2025-11-26 18:07:01] 2025-11-26 23:06:09,468 | INFO     | sum of deviations: 227877123591.31192
[2025-11-26 18:07:01] 2025-11-26 23:06:09,468 | INFO     | mean x: 1764185478.2411346
[2025-11-26 18:07:01] 2025-11-26 23:06:09,468 | INFO     | mean y: 3455587.016548463
[2025-11-26 18:07:01] 2025-11-26 23:06:09,468 | INFO     | intersect: -17126219816.544928
[2025-11-26 18:07:01] 2025-11-26 23:06:09,469 | INFO     | chi2: 3.673340827291096
[2025-11-26 18:07:01] 2025-11-26 23:06:09,469 | INFO     | current chi2=3.673340827291096 (change=39.211285780485866 %)
[2025-11-26 18:07:01] 2025-11-26 23:06:09,469 | INFO     | sum of square deviations: 22646619340.09587
[2025-11-26 18:07:01] 2025-11-26 23:06:09,473 | INFO     | sum of deviations: 194829371713.72247
[2025-11-26 18:07:01] 2025-11-26 23:06:09,473 | INFO     | mean x: 1764185630.7416267
[2025-11-26 18:07:01] 2025-11-26 23:06:09,473 | INFO     | mean y: 3461708.849282297
[2025-11-26 18:07:01] 2025-11-26 23:06:09,474 | INFO     | intersect: -15173866653.588465
[2025-11-26 18:07:01] 2025-11-26 23:06:09,474 | INFO     | chi2: 3.6184407058048764
[2025-11-26 18:07:01] 2025-11-26 23:06:09,474 | INFO     | current chi2=3.6184407058048764 (change=1.4945556121103463 %)
[2025-11-26 18:07:01] 2025-11-26 23:06:09,474 | INFO     | left removable region: 20
[2025-11-26 18:07:01] 2025-11-26 23:06:09,475 | INFO     | sum of square deviations: 19402012776.312336
[2025-11-26 18:07:01] 2025-11-26 23:06:09,478 | INFO     | sum of deviations: 366366302344.0451
[2025-11-26 18:07:01] 2025-11-26 23:06:09,478 | INFO     | mean x: 1764185600.2493703
[2025-11-26 18:07:01] 2025-11-26 23:06:09,478 | INFO     | mean y: 3510282.1813602014
[2025-11-26 18:07:01] 2025-11-26 23:06:09,478 | INFO     | intersect: -33309433197.635193
[2025-11-26 18:07:01] 2025-11-26 23:06:09,479 | INFO     | chi2: 0.05456566233644389
[2025-11-26 18:07:01] 2025-11-26 23:06:09,479 | INFO     | current memory leak: 18.88 B/s (using 397 data points, chi2=0.05)
[2025-11-26 18:07:01] 2025-11-26 23:06:09,479 | INFO     | could have reported an average CPU frequency of 2437 MHz (18 samples)
[2025-11-26 18:07:01] 2025-11-26 23:06:09,480 | INFO     | ..............................
[2025-11-26 18:07:01] 2025-11-26 23:06:09,480 | INFO     | . Timing measurements:
[2025-11-26 18:07:01] 2025-11-26 23:06:09,480 | INFO     | . get job = 0 s
[2025-11-26 18:07:01] 2025-11-26 23:06:09,480 | INFO     | . initial setup = 2 s
[2025-11-26 18:07:01] 2025-11-26 23:06:09,480 | INFO     | . payload setup = 7 s
[2025-11-26 18:07:01] 2025-11-26 23:06:09,480 | INFO     | . stage-in = 0 s
[2025-11-26 18:07:01] 2025-11-26 23:06:09,480 | INFO     | . payload execution = 26060 s
[2025-11-26 18:07:01] 2025-11-26 23:06:09,480 | INFO     | . stage-out = 3 s
[2025-11-26 18:07:01] 2025-11-26 23:06:09,481 | INFO     | . log creation = 0 s
[2025-11-26 18:07:01] 2025-11-26 23:06:09,481 | INFO     | ..............................
[2025-11-26 18:07:01] 2025-11-26 23:06:09,564 | INFO     | 
[2025-11-26 18:07:01] 2025-11-26 23:06:09,564 | INFO     | job summary report
[2025-11-26 18:07:01] 2025-11-26 23:06:09,564 | INFO     | --------------------------------------------------
[2025-11-26 18:07:01] 2025-11-26 23:06:09,565 | INFO     | PanDA job id: 6897139750
[2025-11-26 18:07:01] 2025-11-26 23:06:09,565 | INFO     | task id: 47556161
[2025-11-26 18:07:01] 2025-11-26 23:06:09,565 | INFO     | errors: (none)
[2025-11-26 18:07:01] 2025-11-26 23:06:09,565 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:07:01] 2025-11-26 23:06:09,565 | INFO     | pilot state: finished 
[2025-11-26 18:07:01] 2025-11-26 23:06:09,565 | INFO     | transexitcode: 0
[2025-11-26 18:07:01] 2025-11-26 23:06:09,565 | INFO     | exeerrorcode: 0
[2025-11-26 18:07:01] 2025-11-26 23:06:09,565 | INFO     | exeerrordiag: 
[2025-11-26 18:07:01] 2025-11-26 23:06:09,565 | INFO     | exitcode: 0
[2025-11-26 18:07:01] 2025-11-26 23:06:09,565 | INFO     | exitmsg: OK
[2025-11-26 18:07:01] 2025-11-26 23:06:09,566 | INFO     | cpuconsumptiontime: 299707 s
[2025-11-26 18:07:01] 2025-11-26 23:06:09,566 | INFO     | nevents: 1000
[2025-11-26 18:07:01] 2025-11-26 23:06:09,566 | INFO     | neventsw: 0
[2025-11-26 18:07:01] 2025-11-26 23:06:09,566 | INFO     | pid: 9432
[2025-11-26 18:07:01] 2025-11-26 23:06:09,566 | INFO     | pgrp: 9432
[2025-11-26 18:07:01] 2025-11-26 23:06:09,566 | INFO     | corecount: 12
[2025-11-26 18:07:01] 2025-11-26 23:06:09,566 | INFO     | event service: False
[2025-11-26 18:07:01] 2025-11-26 23:06:09,566 | INFO     | sizes: {0: 2284094, 1: 2284293, 6: 2284555, 11: 2284583, 26072: 2321931, 26076: 2331109, 26081: 2331299}
[2025-11-26 18:07:01] 2025-11-26 23:06:09,566 | INFO     | --------------------------------------------------
[2025-11-26 18:07:01] 2025-11-26 23:06:09,566 | INFO     | 
[2025-11-26 18:07:01] 2025-11-26 23:06:09,567 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 18:07:01] 2025-11-26 23:06:09,591 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,591 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,594 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:07:01] 2025-11-26 23:06:09,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,594 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:07:01] 2025-11-26 23:06:09,595 | INFO     | job 6897139750 has completed (purged errors)
[2025-11-26 18:07:01] 2025-11-26 23:06:09,595 | INFO     | overall cleanup function is called
[2025-11-26 18:07:01] 2025-11-26 23:06:10,460 | INFO     | PID=3056 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 18:07:01] 2025-11-26 23:06:10,612 | INFO     | --- collectZombieJob: --- 10, [9432]
[2025-11-26 18:07:01] 2025-11-26 23:06:10,612 | INFO     | zombie collector waiting for pid 9432
[2025-11-26 18:07:01] 2025-11-26 23:06:10,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:07:01] 2025-11-26 23:06:10,613 | INFO     | collected zombie processes
[2025-11-26 18:07:01] 2025-11-26 23:06:10,613 | INFO     | will attempt to kill all subprocesses of pid=9432
[2025-11-26 18:07:01] 2025-11-26 23:06:10,703 | INFO     | process IDs to be killed: [9432] (in reverse order)
[2025-11-26 18:07:01] 2025-11-26 23:06:10,751 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:07:01] 2025-11-26 23:06:10,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:07:01] 2025-11-26 23:06:10,755 | INFO     | did not find any defunct processes belonging to 9432
[2025-11-26 18:07:01] 2025-11-26 23:06:10,759 | INFO     | did not find any defunct processes belonging to 9432
[2025-11-26 18:07:01] 2025-11-26 23:06:10,761 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:07:01] 2025-11-26 23:06:10,762 | INFO     | ready for new job
[2025-11-26 18:07:01] 2025-11-26 23:06:10,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:07:01] 2025-11-26 23:06:10,764 | INFO     | ***************************************
[2025-11-26 18:07:01] 2025-11-26 23:06:10,764 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:07:01] 2025-11-26 23:06:10,764 | INFO     | ***************************************
[2025-11-26 18:07:01] 2025-11-26 23:06:10,764 | INFO     | 
[2025-11-26 18:07:01] 2025-11-26 23:06:10,765 | INFO     | architecture information:
[2025-11-26 18:07:01] 2025-11-26 23:06:10,766 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:07:01] 2025-11-26 23:06:10,783 | INFO     | cat /etc/os-release:
[2025-11-26 18:07:01] NAME="CentOS Linux"
[2025-11-26 18:07:01] VERSION="7 (Core)"
[2025-11-26 18:07:01] ID="centos"
[2025-11-26 18:07:01] ID_LIKE="rhel fedora"
[2025-11-26 18:07:01] VERSION_ID="7"
[2025-11-26 18:07:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:07:01] ANSI_COLOR="0;31"
[2025-11-26 18:07:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:07:01] HOME_URL="https://www.centos.org/"
[2025-11-26 18:07:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:07:01] 
[2025-11-26 18:07:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:07:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:07:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:07:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:07:01] 
[2025-11-26 18:07:01] 2025-11-26 23:06:10,783 | INFO     | ***************************************
[2025-11-26 18:07:01] 2025-11-26 23:06:11,287 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 18:07:01] 2025-11-26 23:06:11,304 | INFO     | sufficient remaining disk space (28239200256 B)
[2025-11-26 18:07:01] 2025-11-26 23:06:11,304 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:07:01] 2025-11-26 23:06:11,305 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:07:01] 2025-11-26 23:06:11,305 | INFO     | update_server=False
[2025-11-26 18:07:01] 2025-11-26 23:06:11,305 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:07:01] 2025-11-26 23:06:11,305 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 18:07:01] 2025-11-26 23:06:11,306 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:07:01] 2025-11-26 23:06:11,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:07:01] 2025-11-26 23:06:11,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:07:01] 2025-11-26 23:06:11,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:07:01] 2025-11-26 23:06:11,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:07:01] 2025-11-26 23:06:11,491 | INFO     | all payload control threads have been joined
[2025-11-26 18:07:01] 2025-11-26 23:06:11,703 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 18:07:01] 2025-11-26 23:06:11,703 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 18:07:01] 2025-11-26 23:06:11,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:07:01] 2025-11-26 23:06:11,704 | INFO     | will abort loop
[2025-11-26 18:07:01] 2025-11-26 23:06:11,951 | INFO     | all job control threads have been joined
[2025-11-26 18:07:01] 2025-11-26 23:06:12,030 [wrapper] supervise_pilot (15 min periods counter: 30)
[2025-11-26 18:07:01] 2025-11-26 23:06:12,295 | INFO     | all data control threads have been joined
[2025-11-26 18:07:01] 2025-11-26 23:06:12,310 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:12,312 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:12,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:07:01] 2025-11-26 23:06:12,496 | INFO     | [payload] control thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:12,704 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:12,709 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:12,891 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:12,955 | INFO     | [job] control thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:13,147 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:13,300 | INFO     | [data] control thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:13,333 | INFO     | [job] validate thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:13,359 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:13,538 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:13,794 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:14,422 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:15,312 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:21,801 | INFO     | job.realtimelogging is not enabled
[2025-11-26 18:07:01] 2025-11-26 23:06:22,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:07:01] 2025-11-26 23:06:55,107 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:07:01] 2025-11-26 23:06:55,974 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562780227392)>', '<ExcThread(monitor, started 140562132891392)>']
[2025-11-26 18:07:01] 2025-11-26 23:06:56,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:07:01] 2025-11-26 23:06:56,491 | INFO     | [monitor] control thread has ended
[2025-11-26 18:07:01] 2025-11-26 23:07:00,999 | INFO     | all workflow threads have been joined
[2025-11-26 18:07:01] 2025-11-26 23:07:01,000 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:07:01] 2025-11-26 23:07:01,000 | INFO     | traces error code: 0
[2025-11-26 18:07:01] 2025-11-26 23:07:01,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:07:01] 2025-11-26 23:07:01,100 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:07:01] 2025-11-26 23:07:01,104 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:07:01] 2025-11-26 23:07:01,108 [wrapper] pilotpid: 3056
[2025-11-26 18:07:01] 2025-11-26 23:07:01,112 [wrapper] Pilot exit status: 0
[2025-11-26 18:07:01] 2025-11-26 23:07:01,127 [wrapper] pandaids: 6897139750
[2025-11-26 18:07:01] 2025-11-26 23:07:01,172 [wrapper] cleanup supervisor_pilot 12354 3057
[2025-11-26 18:07:01] 2025-11-26 23:07:01,176 [wrapper] Test setup, not cleaning
[2025-11-26 18:07:01] 2025-11-26 23:07:01,181 [wrapper] apfmon messages muted
[2025-11-26 18:07:01] 2025-11-26 23:07:01,185 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:07:01] 2025-11-26 23:07:01,189 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:07:01]  *** Error codes and diagnostics ***
[2025-11-26 18:07:01]     "exeErrorCode": 0,
[2025-11-26 18:07:01]     "exeErrorDiag": "",
[2025-11-26 18:07:01]     "pilotErrorCode": 0,
[2025-11-26 18:07:01]     "pilotErrorDiag": "",
[2025-11-26 18:07:01]  *** Listing of results directory ***
[2025-11-26 18:07:01] total 1316612
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 18:07:01] -rwx------ 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas       100 Nov 26 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:07:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 10:50 run_atlas
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas       105 Nov 26 10:50 job.xml
[2025-11-26 18:07:01] -rw-r--r-- 2 boincer umatlas 409048900 Nov 26 10:50 EVNT.47483658._002199.pool.root.1
[2025-11-26 18:07:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 10:50 start_atlas.sh
[2025-11-26 18:07:01] drwxrwx--x 2 boincer umatlas      4096 Nov 26 10:50 shared
[2025-11-26 18:07:01] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 10:50 input.tar.gz
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas         0 Nov 26 10:50 boinc_lockfile
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 10:50 pandaJob.out
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas        57 Nov 26 10:50 setup.sh.local
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas    991855 Nov 26 10:51 agis_schedconf.cvmfs.json
[2025-11-26 18:07:01] drwx------ 5 boincer umatlas      4096 Nov 26 10:51 pilot3
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas       532 Nov 26 17:56 boinc_task_state.xml
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas      5956 Nov 26 18:00 init_data.xml
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas        95 Nov 26 18:05 pilot_heartbeat.json
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas 923563793 Nov 26 18:05 HITS.47556161._001830.pool.root.1
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas      1063 Nov 26 18:05 memory_monitor_summary.json
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas   1516240 Nov 26 18:06 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas   2195092 Nov 26 18:06 log.47556161._001830.job.log.tgz.1
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas      8678 Nov 26 18:06 heartbeat.json
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 18:06 boinc_mmap_file
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas        29 Nov 26 18:06 wrapper_checkpoint.txt
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas      4810 Nov 26 18:07 pilotlog.txt
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas   3646128 Nov 26 18:07 log.47556161._001830.job.log.1
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas       353 Nov 26 18:07 output.list
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas       620 Nov 26 18:07 runtime_log
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas   5857280 Nov 26 18:07 result.tar.gz
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas      9345 Nov 26 18:07 runtime_log.err
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas       670 Nov 26 18:07 6njKDmcWBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhYJKDmU3rEvm.diag
[2025-11-26 18:07:01] -rw-r--r-- 1 boincer umatlas     21287 Nov 26 18:07 stderr.txt
[2025-11-26 18:07:01] HITS file was successfully produced:
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas 923563793 Nov 26 18:05 shared/HITS.pool.root.1
[2025-11-26 18:07:01]  *** Contents of shared directory: ***
[2025-11-26 18:07:01] total 1307704
[2025-11-26 18:07:01] -rw-r--r-- 2 boincer umatlas 409048900 Nov 26 10:50 ATLAS.root_0
[2025-11-26 18:07:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 10:50 start_atlas.sh
[2025-11-26 18:07:01] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 10:50 input.tar.gz
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas 923563793 Nov 26 18:05 HITS.pool.root.1
[2025-11-26 18:07:01] -rw------- 1 boincer umatlas   5857280 Nov 26 18:07 result.tar.gz
18:07:02 (31606): run_atlas exited; CPU time 293125.966597
18:07:02 (31606): called boinc_finish(0)

</stderr_txt>
]]>

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