Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:21:13 (8340): wrapper (7.7.26015): starting
11:21:13 (8340): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 11:21:13] Arguments: --nthreads 8
[2025-11-26 11:21:13] Threads: 8
[2025-11-26 11:21:13] Checking for CVMFS
[2025-11-26 11:21:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:21:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:21:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:21:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:21:14] 2.11.2.0 11495 117934 131168 153328 2 49 11259099 18432000 1565 130560 0 84256636 99.974 4999963 25242 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 11:21:14] CVMFS is ok
[2025-11-26 11:21:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:21:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:21:14] Further information can be found at the LHC@home message board.
[2025-11-26 11:21:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:21:14] Checking for apptainer binary...
[2025-11-26 11:21:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:21:14] Running /usr/bin/apptainer --version
[2025-11-26 11:21:14] apptainer version 1.3.2-1.el7
[2025-11-26 11:21:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:21:14] c-206-31.aglt2.org
[2025-11-26 11:21:14] apptainer works
[2025-11-26 11:21:14] Set ATHENA_PROC_NUMBER=8
[2025-11-26 11:21:14] Set ATHENA_CORE_NUMBER=8
[2025-11-26 11:21:14] Starting ATLAS job with PandaID=6897394508
[2025-11-26 11:21:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:53:29]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:53:29] 2025-11-27 11:52:47,985 | INFO     | monitor loop #5018: job 0:6897394508 is in state 'finished'
[2025-11-27 06:53:29] 2025-11-27 11:52:47,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:53:29] 2025-11-27 11:52:48,171 | INFO     | time since job start (70282s) is within the limit (172800.0s)
[2025-11-27 06:53:29] 2025-11-27 11:52:49,088 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 06:53:29] 2025-11-27 11:52:49,092 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2439.125
[2025-11-27 06:53:29] 2025-11-27 11:52:49,094 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897394508/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:53:29] 2025-11-27 11:52:49,095 | INFO     | extracted standard info from prmon json
[2025-11-27 06:53:29] 2025-11-27 11:52:49,095 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:53:29] 2025-11-27 11:52:49,095 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:53:29] 2025-11-27 11:52:49,110 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:53:29] 2025-11-27 11:52:49,111 | INFO     | sum of square deviations: 474062206962.7072
[2025-11-27 06:53:29] 2025-11-27 11:52:49,144 | INFO     | sum of deviations: 2193695144363.404
[2025-11-27 06:53:29] 2025-11-27 11:52:49,144 | INFO     | mean x: 1764209218.1032987
[2025-11-27 06:53:29] 2025-11-27 11:52:49,144 | INFO     | mean y: 2876840.9461805555
[2025-11-27 06:53:29] 2025-11-27 11:52:49,145 | INFO     | intersect: -8160898162.739811
[2025-11-27 06:53:29] 2025-11-27 11:52:49,146 | INFO     | chi2: 5.456371920889931
[2025-11-27 06:53:29] 2025-11-27 11:52:49,148 | INFO     | sum of square deviations: 467916480445.8777
[2025-11-27 06:53:29] 2025-11-27 11:52:49,194 | INFO     | sum of deviations: 2552700364398.0347
[2025-11-27 06:53:29] 2025-11-27 11:52:49,194 | INFO     | mean x: 1764209065.6059284
[2025-11-27 06:53:29] 2025-11-27 11:52:49,194 | INFO     | mean y: 2885743.6129032257
[2025-11-27 06:53:29] 2025-11-27 11:52:49,194 | INFO     | intersect: -9621688967.573132
[2025-11-27 06:53:29] 2025-11-27 11:52:49,196 | INFO     | chi2: 2.5374880810736635
[2025-11-27 06:53:29] 2025-11-27 11:52:49,196 | INFO     | current chi2=2.5374880810736635 (change=53.49495749439674 %)
[2025-11-27 06:53:29] 2025-11-27 11:52:49,198 | INFO     | sum of square deviations: 461824103766.5262
[2025-11-27 06:53:29] 2025-11-27 11:52:49,242 | INFO     | sum of deviations: 2624920067732.275
[2025-11-27 06:53:29] 2025-11-27 11:52:49,243 | INFO     | mean x: 1764208913.1085815
[2025-11-27 06:53:29] 2025-11-27 11:52:49,243 | INFO     | mean y: 2887549.401050788
[2025-11-27 06:53:29] 2025-11-27 11:52:49,243 | INFO     | intersect: -10024539217.46169
[2025-11-27 06:53:29] 2025-11-27 11:52:49,245 | INFO     | chi2: 2.3250760025782693
[2025-11-27 06:53:29] 2025-11-27 11:52:49,245 | INFO     | current chi2=2.3250760025782693 (change=8.370958668917897 %)
[2025-11-27 06:53:29] 2025-11-27 11:52:49,245 | INFO     | right removable region: 1141
[2025-11-27 06:53:29] 2025-11-27 11:52:49,247 | INFO     | sum of square deviations: 467916126524.08966
[2025-11-27 06:53:29] 2025-11-27 11:52:49,291 | INFO     | sum of deviations: 1890549486660.5576
[2025-11-27 06:53:29] 2025-11-27 11:52:49,291 | INFO     | mean x: 1764209370.6050568
[2025-11-27 06:53:29] 2025-11-27 11:52:49,292 | INFO     | mean y: 2884354.455972101
[2025-11-27 06:53:29] 2025-11-27 11:52:49,292 | INFO     | intersect: -7125156187.201708
[2025-11-27 06:53:29] 2025-11-27 11:52:49,293 | INFO     | chi2: 3.3797700819127936
[2025-11-27 06:53:29] 2025-11-27 11:52:49,294 | INFO     | current chi2=3.3797700819127936 (change=38.058289813910726 %)
[2025-11-27 06:53:29] 2025-11-27 11:52:49,295 | INFO     | sum of square deviations: 461823606190.59937
[2025-11-27 06:53:29] 2025-11-27 11:52:49,339 | INFO     | sum of deviations: 1812362691055.8464
[2025-11-27 06:53:29] 2025-11-27 11:52:49,340 | INFO     | mean x: 1764209523.1042032
[2025-11-27 06:53:29] 2025-11-27 11:52:49,340 | INFO     | mean y: 2886311.177758319
[2025-11-27 06:53:29] 2025-11-27 11:52:49,340 | INFO     | intersect: -6920509279.735129
[2025-11-27 06:53:29] 2025-11-27 11:52:49,342 | INFO     | chi2: 3.322406727158535
[2025-11-27 06:53:29] 2025-11-27 11:52:49,342 | INFO     | current chi2=3.322406727158535 (change=1.697256125830709 %)
[2025-11-27 06:53:29] 2025-11-27 11:52:49,342 | INFO     | left removable region: 20
[2025-11-27 06:53:29] 2025-11-27 11:52:49,344 | INFO     | sum of square deviations: 436812451972.4232
[2025-11-27 06:53:29] 2025-11-27 11:52:49,370 | INFO     | sum of deviations: 2133097780197.2039
[2025-11-27 06:53:29] 2025-11-27 11:52:49,370 | INFO     | mean x: 1764209492.6110616
[2025-11-27 06:53:29] 2025-11-27 11:52:49,370 | INFO     | mean y: 2899818.661016949
[2025-11-27 06:53:29] 2025-11-27 11:52:49,370 | INFO     | intersect: -8612310978.326681
[2025-11-27 06:53:29] 2025-11-27 11:52:49,371 | INFO     | chi2: 0.15002433816887856
[2025-11-27 06:53:29] 2025-11-27 11:52:49,372 | INFO     | current memory leak: 4.88 B/s (using 1121 data points, chi2=0.15)
[2025-11-27 06:53:29] 2025-11-27 11:52:49,372 | INFO     | could have reported an average CPU frequency of 2629 MHz (42 samples)
[2025-11-27 06:53:29] 2025-11-27 11:52:49,373 | INFO     | ..............................
[2025-11-27 06:53:29] 2025-11-27 11:52:49,373 | INFO     | . Timing measurements:
[2025-11-27 06:53:29] 2025-11-27 11:52:49,373 | INFO     | . get job = 0 s
[2025-11-27 06:53:29] 2025-11-27 11:52:49,373 | INFO     | . initial setup = 2 s
[2025-11-27 06:53:29] 2025-11-27 11:52:49,373 | INFO     | . payload setup = 5 s
[2025-11-27 06:53:29] 2025-11-27 11:52:49,373 | INFO     | . stage-in = 0 s
[2025-11-27 06:53:29] 2025-11-27 11:52:49,373 | INFO     | . payload execution = 70246 s
[2025-11-27 06:53:29] 2025-11-27 11:52:49,373 | INFO     | . stage-out = 3 s
[2025-11-27 06:53:29] 2025-11-27 11:52:49,373 | INFO     | . log creation = 0 s
[2025-11-27 06:53:29] 2025-11-27 11:52:49,373 | INFO     | ..............................
[2025-11-27 06:53:29] 2025-11-27 11:52:49,448 | INFO     | 
[2025-11-27 06:53:29] 2025-11-27 11:52:49,448 | INFO     | job summary report
[2025-11-27 06:53:29] 2025-11-27 11:52:49,448 | INFO     | --------------------------------------------------
[2025-11-27 06:53:29] 2025-11-27 11:52:49,448 | INFO     | PanDA job id: 6897394508
[2025-11-27 06:53:29] 2025-11-27 11:52:49,449 | INFO     | task id: 47556161
[2025-11-27 06:53:29] 2025-11-27 11:52:49,449 | INFO     | errors: (none)
[2025-11-27 06:53:29] 2025-11-27 11:52:49,449 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:53:29] 2025-11-27 11:52:49,449 | INFO     | pilot state: finished 
[2025-11-27 06:53:29] 2025-11-27 11:52:49,449 | INFO     | transexitcode: 0
[2025-11-27 06:53:29] 2025-11-27 11:52:49,449 | INFO     | exeerrorcode: 0
[2025-11-27 06:53:29] 2025-11-27 11:52:49,450 | INFO     | exeerrordiag: 
[2025-11-27 06:53:29] 2025-11-27 11:52:49,450 | INFO     | exitcode: 0
[2025-11-27 06:53:29] 2025-11-27 11:52:49,450 | INFO     | exitmsg: OK
[2025-11-27 06:53:29] 2025-11-27 11:52:49,450 | INFO     | cpuconsumptiontime: 545551 s
[2025-11-27 06:53:29] 2025-11-27 11:52:49,450 | INFO     | nevents: 1000
[2025-11-27 06:53:29] 2025-11-27 11:52:49,450 | INFO     | neventsw: 0
[2025-11-27 06:53:29] 2025-11-27 11:52:49,451 | INFO     | pid: 18553
[2025-11-27 06:53:29] 2025-11-27 11:52:49,451 | INFO     | pgrp: 18553
[2025-11-27 06:53:29] 2025-11-27 11:52:49,451 | INFO     | corecount: 8
[2025-11-27 06:53:29] 2025-11-27 11:52:49,451 | INFO     | event service: False
[2025-11-27 06:53:29] 2025-11-27 11:52:49,451 | INFO     | sizes: {0: 2284094, 1: 2284293, 5: 2284555, 12: 2284611, 70255: 2341213, 70260: 2350207, 70263: 2350391, 70269: 2350637}
[2025-11-27 06:53:29] 2025-11-27 11:52:49,451 | INFO     | --------------------------------------------------
[2025-11-27 06:53:29] 2025-11-27 11:52:49,452 | INFO     | 
[2025-11-27 06:53:29] 2025-11-27 11:52:49,452 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 06:53:29] 2025-11-27 11:52:49,475 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,475 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,475 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,476 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,478 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:53:29] 2025-11-27 11:52:49,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,479 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:53:29] 2025-11-27 11:52:49,479 | INFO     | job 6897394508 has completed (purged errors)
[2025-11-27 06:53:29] 2025-11-27 11:52:49,479 | INFO     | overall cleanup function is called
[2025-11-27 06:53:29] 2025-11-27 11:52:50,497 | INFO     | --- collectZombieJob: --- 10, [18553]
[2025-11-27 06:53:29] 2025-11-27 11:52:50,563 | INFO     | zombie collector waiting for pid 18553
[2025-11-27 06:53:29] 2025-11-27 11:52:50,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:53:29] 2025-11-27 11:52:50,563 | INFO     | collected zombie processes
[2025-11-27 06:53:29] 2025-11-27 11:52:50,563 | INFO     | will attempt to kill all subprocesses of pid=18553
[2025-11-27 06:53:29] 2025-11-27 11:52:50,723 | INFO     | process IDs to be killed: [18553] (in reverse order)
[2025-11-27 06:53:29] 2025-11-27 11:52:50,784 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:53:29] 2025-11-27 11:52:50,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:53:29] 2025-11-27 11:52:50,790 | INFO     | did not find any defunct processes belonging to 18553
[2025-11-27 06:53:29] 2025-11-27 11:52:50,795 | INFO     | did not find any defunct processes belonging to 18553
[2025-11-27 06:53:29] 2025-11-27 11:52:50,797 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:53:29] 2025-11-27 11:52:50,798 | INFO     | ready for new job
[2025-11-27 06:53:29] 2025-11-27 11:52:50,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:53:29] 2025-11-27 11:52:50,803 | INFO     | ***************************************
[2025-11-27 06:53:29] 2025-11-27 11:52:50,803 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:53:29] 2025-11-27 11:52:50,803 | INFO     | ***************************************
[2025-11-27 06:53:29] 2025-11-27 11:52:50,803 | INFO     | 
[2025-11-27 06:53:29] 2025-11-27 11:52:50,805 | INFO     | architecture information:
[2025-11-27 06:53:29] 2025-11-27 11:52:50,805 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:53:29] 2025-11-27 11:52:50,826 | INFO     | cat /etc/os-release:
[2025-11-27 06:53:29] NAME="CentOS Linux"
[2025-11-27 06:53:29] VERSION="7 (Core)"
[2025-11-27 06:53:29] ID="centos"
[2025-11-27 06:53:29] ID_LIKE="rhel fedora"
[2025-11-27 06:53:29] VERSION_ID="7"
[2025-11-27 06:53:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:53:29] ANSI_COLOR="0;31"
[2025-11-27 06:53:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:53:29] HOME_URL="https://www.centos.org/"
[2025-11-27 06:53:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:53:29] 
[2025-11-27 06:53:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:53:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:53:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:53:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:53:29] 
[2025-11-27 06:53:29] 2025-11-27 11:52:50,827 | INFO     | ***************************************
[2025-11-27 06:53:29] 2025-11-27 11:52:51,331 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 06:53:29] 2025-11-27 11:52:51,351 | INFO     | sufficient remaining disk space (26556235776 B)
[2025-11-27 06:53:29] 2025-11-27 11:52:51,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:53:29] 2025-11-27 11:52:51,352 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:53:29] 2025-11-27 11:52:51,352 | INFO     | update_server=False
[2025-11-27 06:53:29] 2025-11-27 11:52:51,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:53:29] 2025-11-27 11:52:51,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:53:29] 2025-11-27 11:52:51,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:53:29] 2025-11-27 11:52:51,494 | INFO     | aborting loop
[2025-11-27 06:53:29] 2025-11-27 11:52:51,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:53:29] 2025-11-27 11:52:51,858 | INFO     | all data control threads have been joined
[2025-11-27 06:53:29] 2025-11-27 11:52:52,358 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:52,358 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:52,376 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:52,447 | INFO     | all payload control threads have been joined
[2025-11-27 06:53:29] 2025-11-27 11:52:52,447 | INFO     | all job control threads have been joined
[2025-11-27 06:53:29] 2025-11-27 11:52:52,499 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:52,518 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:52,863 | INFO     | [data] control thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:53,145 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:53,176 | INFO     | [job] validate thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:53,293 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:53,452 | INFO     | [payload] control thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:53,452 | INFO     | [job] control thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:53,475 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:53,562 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:53,684 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:53,800 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:52:54,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:53:29] 2025-11-27 11:52:58,375 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:53:29] 2025-11-27 11:53:21,433 | INFO     | PID=12050 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 06:53:29] 2025-11-27 11:53:21,433 | INFO     | .. there are 3 such processes running
[2025-11-27 06:53:29] 2025-11-27 11:53:21,433 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:53:29] 2025-11-27 11:53:21,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:53:29] 2025-11-27 11:53:21,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:53:29] 2025-11-27 11:53:21,928 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:53:29] 2025-11-27 11:53:23,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140719681218368)>', '<ExcThread(monitor, started 140719033415424)>']
[2025-11-27 06:53:29] 2025-11-27 11:53:24,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:53:29] 2025-11-27 11:53:24,445 | INFO     | [monitor] control thread has ended
[2025-11-27 06:53:29] 2025-11-27 11:53:28,848 | INFO     | all workflow threads have been joined
[2025-11-27 06:53:29] 2025-11-27 11:53:28,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:53:29] 2025-11-27 11:53:28,849 | INFO     | traces error code: 0
[2025-11-27 06:53:29] 2025-11-27 11:53:28,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:53:29] 2025-11-27 11:53:28,954 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:53:29] 2025-11-27 11:53:28,957 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:53:29] 2025-11-27 11:53:28,959 [wrapper] pilotpid: 12050
[2025-11-27 06:53:29] 2025-11-27 11:53:28,962 [wrapper] Pilot exit status: 0
[2025-11-27 06:53:29] 2025-11-27 11:53:28,971 [wrapper] pandaids: 6897394508
[2025-11-27 06:53:29] 2025-11-27 11:53:29,020 [wrapper] cleanup supervisor_pilot 29516 12051
[2025-11-27 06:53:29] 2025-11-27 11:53:29,023 [wrapper] Test setup, not cleaning
[2025-11-27 06:53:29] 2025-11-27 11:53:29,025 [wrapper] apfmon messages muted
[2025-11-27 06:53:29] 2025-11-27 11:53:29,028 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:53:29] 2025-11-27 11:53:29,030 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:53:29]  *** Error codes and diagnostics ***
[2025-11-27 06:53:29]     "exeErrorCode": 0,
[2025-11-27 06:53:29]     "exeErrorDiag": "",
[2025-11-27 06:53:29]     "pilotErrorCode": 0,
[2025-11-27 06:53:29]     "pilotErrorDiag": "",
[2025-11-27 06:53:29]  *** Listing of results directory ***
[2025-11-27 06:53:29] total 1331352
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 06:53:29] -rwx------ 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas       100 Nov 26 11:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:53:29] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 11:20 run_atlas
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas       105 Nov 26 11:20 job.xml
[2025-11-27 06:53:29] -rw-r--r-- 2 boincer umatlas 410280163 Nov 26 11:21 EVNT.47483658._002221.pool.root.1
[2025-11-27 06:53:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 11:21 start_atlas.sh
[2025-11-27 06:53:29] drwxrwx--x 2 boincer umatlas      4096 Nov 26 11:21 shared
[2025-11-27 06:53:29] -rw-r--r-- 2 boincer umatlas    590105 Nov 26 11:21 input.tar.gz
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas         0 Nov 26 11:21 boinc_lockfile
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 11:21 pandaJob.out
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas        57 Nov 26 11:21 setup.sh.local
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas    991545 Nov 26 11:21 agis_schedconf.cvmfs.json
[2025-11-27 06:53:29] drwx------ 5 boincer umatlas      4096 Nov 26 11:21 pilot3
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas       533 Nov 27 06:42 boinc_task_state.xml
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas      5954 Nov 27 06:46 init_data.xml
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas 925066055 Nov 27 06:52 HITS.47556161._002046.pool.root.1
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas      1068 Nov 27 06:52 memory_monitor_summary.json
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas   1516240 Nov 27 06:52 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas   2306356 Nov 27 06:52 log.47556161._002046.job.log.tgz.1
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas        95 Nov 27 06:52 pilot_heartbeat.json
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas      8664 Nov 27 06:52 heartbeat.json
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas        29 Nov 27 06:52 wrapper_checkpoint.txt
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 06:52 boinc_mmap_file
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas      4821 Nov 27 06:53 pilotlog.txt
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas   9709728 Nov 27 06:53 log.47556161._002046.job.log.1
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas       353 Nov 27 06:53 output.list
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas       620 Nov 27 06:53 runtime_log
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas  12032000 Nov 27 06:53 result.tar.gz
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 06:53 runtime_log.err
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas       668 Nov 27 06:53 3arLDmDXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxUMKDmjOSQHn.diag
[2025-11-27 06:53:29] -rw-r--r-- 1 boincer umatlas     21300 Nov 27 06:53 stderr.txt
[2025-11-27 06:53:29] HITS file was successfully produced:
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas 925066055 Nov 27 06:52 shared/HITS.pool.root.1
[2025-11-27 06:53:29]  *** Contents of shared directory: ***
[2025-11-27 06:53:29] total 1316412
[2025-11-27 06:53:29] -rw-r--r-- 2 boincer umatlas 410280163 Nov 26 11:21 ATLAS.root_0
[2025-11-27 06:53:29] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 11:21 start_atlas.sh
[2025-11-27 06:53:29] -rw-r--r-- 2 boincer umatlas    590105 Nov 26 11:21 input.tar.gz
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas 925066055 Nov 27 06:52 HITS.pool.root.1
[2025-11-27 06:53:29] -rw------- 1 boincer umatlas  12032000 Nov 27 06:53 result.tar.gz
06:53:31 (8340): run_atlas exited; CPU time 544540.071697
06:53:31 (8340): called boinc_finish(0)

</stderr_txt>
]]>

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