Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:00:24 (14824): wrapper (7.7.26015): starting
11:00:24 (14824): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 11:00:24] Arguments: --nthreads 8
[2025-11-26 11:00:24] Threads: 8
[2025-11-26 11:00:24] Checking for CVMFS
[2025-11-26 11:00:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:00:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:00:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:00:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:00:25] 2.11.2.0 2873 60611 89200 153326 0 82 19029403 20275200 1 130560 0 15382053 99.838 3564600 31009 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 11:00:25] CVMFS is ok
[2025-11-26 11:00:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:00:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:00:25] Further information can be found at the LHC@home message board.
[2025-11-26 11:00:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:00:25] Checking for apptainer binary...
[2025-11-26 11:00:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:00:25] Running /usr/bin/apptainer --version
[2025-11-26 11:00:25] apptainer version 1.3.2-1.el7
[2025-11-26 11:00:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:00:26] c-115-13.aglt2.org
[2025-11-26 11:00:26] apptainer works
[2025-11-26 11:00:26] Set ATHENA_PROC_NUMBER=8
[2025-11-26 11:00:26] Set ATHENA_CORE_NUMBER=8
[2025-11-26 11:00:26] Starting ATLAS job with PandaID=6897139661
[2025-11-26 11:00:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:15:03]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:15:04] 2025-11-27 03:14:31,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:15:04] 2025-11-27 03:14:31,838 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 22:15:04] 2025-11-27 03:14:31,841 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-26 22:15:04] 2025-11-27 03:14:31,843 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897139661/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 22:15:04] 2025-11-27 03:14:31,844 | INFO     | extracted standard info from prmon json
[2025-11-26 22:15:04] 2025-11-27 03:14:31,844 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 22:15:04] 2025-11-27 03:14:31,844 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 22:15:04] 2025-11-27 03:14:31,854 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:15:04] 2025-11-27 03:14:31,855 | INFO     | sum of square deviations: 89960567160.04387
[2025-11-26 22:15:04] 2025-11-27 03:14:31,863 | INFO     | sum of deviations: 788773011113.995
[2025-11-26 22:15:04] 2025-11-27 03:14:31,864 | INFO     | mean x: 1764193036.1163142
[2025-11-26 22:15:04] 2025-11-27 03:14:31,864 | INFO     | mean y: 3229828.2598187313
[2025-11-26 22:15:04] 2025-11-27 03:14:31,864 | INFO     | intersect: -15465190360.867937
[2025-11-26 22:15:04] 2025-11-27 03:14:31,865 | INFO     | chi2: 4.878564999260268
[2025-11-26 22:15:04] 2025-11-27 03:14:31,865 | INFO     | sum of square deviations: 87937667620.62988
[2025-11-26 22:15:04] 2025-11-27 03:14:31,873 | INFO     | sum of deviations: 987140264811.2164
[2025-11-26 22:15:04] 2025-11-27 03:14:31,874 | INFO     | mean x: 1764192883.6210046
[2025-11-26 22:15:04] 2025-11-27 03:14:31,874 | INFO     | mean y: 3244763.1293759514
[2025-11-26 22:15:04] 2025-11-27 03:14:31,874 | INFO     | intersect: -19800621741.821575
[2025-11-26 22:15:04] 2025-11-27 03:14:31,874 | INFO     | chi2: 2.6147114497534822
[2025-11-26 22:15:04] 2025-11-27 03:14:31,875 | INFO     | current chi2=2.6147114497534822 (change=46.404087059412994 %)
[2025-11-26 22:15:04] 2025-11-27 03:14:31,875 | INFO     | sum of square deviations: 85945286960.93716
[2025-11-26 22:15:04] 2025-11-27 03:14:31,883 | INFO     | sum of deviations: 999223368778.9589
[2025-11-26 22:15:04] 2025-11-27 03:14:31,883 | INFO     | mean x: 1764192731.1242332
[2025-11-26 22:15:04] 2025-11-27 03:14:31,884 | INFO     | mean y: 3245679.667177914
[2025-11-26 22:15:04] 2025-11-27 03:14:31,884 | INFO     | intersect: -20507740626.89464
[2025-11-26 22:15:04] 2025-11-27 03:14:31,884 | INFO     | chi2: 2.5413534778476743
[2025-11-26 22:15:04] 2025-11-27 03:14:31,885 | INFO     | current chi2=2.5413534778476743 (change=2.8055857525970684 %)
[2025-11-26 22:15:04] 2025-11-27 03:14:31,885 | INFO     | right removable region: 651
[2025-11-26 22:15:04] 2025-11-27 03:14:31,885 | INFO     | sum of square deviations: 87937458878.87099
[2025-11-26 22:15:04] 2025-11-27 03:14:31,894 | INFO     | sum of deviations: 580559539211.7153
[2025-11-26 22:15:04] 2025-11-27 03:14:31,894 | INFO     | mean x: 1764193188.6194825
[2025-11-26 22:15:04] 2025-11-27 03:14:31,894 | INFO     | mean y: 3245493.1628614916
[2025-11-26 22:15:04] 2025-11-27 03:14:31,894 | INFO     | intersect: -11643886431.312908
[2025-11-26 22:15:04] 2025-11-27 03:14:31,895 | INFO     | chi2: 2.472975214515341
[2025-11-26 22:15:04] 2025-11-27 03:14:31,895 | INFO     | current chi2=2.472975214515341 (change=49.30937243041108 %)
[2025-11-26 22:15:04] 2025-11-27 03:14:31,895 | INFO     | sum of square deviations: 85945029907.90659
[2025-11-26 22:15:04] 2025-11-27 03:14:31,903 | INFO     | sum of deviations: 541520571960.5257
[2025-11-26 22:15:04] 2025-11-27 03:14:31,903 | INFO     | mean x: 1764193341.1180983
[2025-11-26 22:15:04] 2025-11-27 03:14:31,904 | INFO     | mean y: 3248478.811349693
[2025-11-26 22:15:04] 2025-11-27 03:14:31,904 | INFO     | intersect: -11112542488.448938
[2025-11-26 22:15:04] 2025-11-27 03:14:31,904 | INFO     | chi2: 2.4410853182634638
[2025-11-26 22:15:04] 2025-11-27 03:14:31,905 | INFO     | current chi2=2.4410853182634638 (change=1.2895356194715064 %)
[2025-11-26 22:15:04] 2025-11-27 03:14:31,905 | INFO     | left removable region: 20
[2025-11-26 22:15:04] 2025-11-27 03:14:31,905 | INFO     | sum of square deviations: 77905232463.2233
[2025-11-26 22:15:04] 2025-11-27 03:14:31,913 | INFO     | sum of deviations: 706346828529.2949
[2025-11-26 22:15:04] 2025-11-27 03:14:31,913 | INFO     | mean x: 1764193310.6291602
[2025-11-26 22:15:04] 2025-11-27 03:14:31,913 | INFO     | mean y: 3268201.7448494453
[2025-11-26 22:15:04] 2025-11-27 03:14:31,913 | INFO     | intersect: -15992221580.841524
[2025-11-26 22:15:04] 2025-11-27 03:14:31,914 | INFO     | chi2: 0.07846504690035323
[2025-11-26 22:15:04] 2025-11-27 03:14:31,914 | INFO     | current memory leak: 9.07 B/s (using 631 data points, chi2=0.08)
[2025-11-26 22:15:04] 2025-11-27 03:14:31,914 | INFO     | could have reported an average CPU frequency of 2377 MHz (26 samples)
[2025-11-26 22:15:04] 2025-11-27 03:14:31,915 | INFO     | ..............................
[2025-11-26 22:15:04] 2025-11-27 03:14:31,915 | INFO     | . Timing measurements:
[2025-11-26 22:15:04] 2025-11-27 03:14:31,915 | INFO     | . get job = 0 s
[2025-11-26 22:15:04] 2025-11-27 03:14:31,915 | INFO     | . initial setup = 2 s
[2025-11-26 22:15:04] 2025-11-27 03:14:31,915 | INFO     | . payload setup = 8 s
[2025-11-26 22:15:04] 2025-11-27 03:14:31,915 | INFO     | . stage-in = 0 s
[2025-11-26 22:15:04] 2025-11-27 03:14:31,915 | INFO     | . payload execution = 40385 s
[2025-11-26 22:15:04] 2025-11-27 03:14:31,915 | INFO     | . stage-out = 3 s
[2025-11-26 22:15:04] 2025-11-27 03:14:31,915 | INFO     | . log creation = 0 s
[2025-11-26 22:15:04] 2025-11-27 03:14:31,916 | INFO     | ..............................
[2025-11-26 22:15:04] 2025-11-27 03:14:31,995 | INFO     | 
[2025-11-26 22:15:04] 2025-11-27 03:14:31,996 | INFO     | job summary report
[2025-11-26 22:15:04] 2025-11-27 03:14:31,996 | INFO     | --------------------------------------------------
[2025-11-26 22:15:04] 2025-11-27 03:14:31,996 | INFO     | PanDA job id: 6897139661
[2025-11-26 22:15:04] 2025-11-27 03:14:31,996 | INFO     | task id: 47556161
[2025-11-26 22:15:04] 2025-11-27 03:14:31,998 | INFO     | errors: (none)
[2025-11-26 22:15:04] 2025-11-27 03:14:31,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:15:04] 2025-11-27 03:14:31,998 | INFO     | pilot state: finished 
[2025-11-26 22:15:04] 2025-11-27 03:14:31,998 | INFO     | transexitcode: 0
[2025-11-26 22:15:04] 2025-11-27 03:14:31,998 | INFO     | exeerrorcode: 0
[2025-11-26 22:15:04] 2025-11-27 03:14:31,998 | INFO     | exeerrordiag: 
[2025-11-26 22:15:04] 2025-11-27 03:14:31,999 | INFO     | exitcode: 0
[2025-11-26 22:15:04] 2025-11-27 03:14:31,999 | INFO     | exitmsg: OK
[2025-11-26 22:15:04] 2025-11-27 03:14:31,999 | INFO     | cpuconsumptiontime: 314742 s
[2025-11-26 22:15:04] 2025-11-27 03:14:31,999 | INFO     | nevents: 1000
[2025-11-26 22:15:04] 2025-11-27 03:14:31,999 | INFO     | neventsw: 0
[2025-11-26 22:15:04] 2025-11-27 03:14:31,999 | INFO     | pid: 25409
[2025-11-26 22:15:04] 2025-11-27 03:14:31,999 | INFO     | pgrp: 25409
[2025-11-26 22:15:04] 2025-11-27 03:14:31,999 | INFO     | corecount: 8
[2025-11-26 22:15:04] 2025-11-27 03:14:31,999 | INFO     | event service: False
[2025-11-26 22:15:04] 2025-11-27 03:14:32,000 | INFO     | sizes: {0: 2284094, 1: 2284293, 6: 2284555, 11: 2284583, 40398: 2328373, 40402: 2337367, 40403: 2337551, 40411: 2337797}
[2025-11-26 22:15:04] 2025-11-27 03:14:32,000 | INFO     | --------------------------------------------------
[2025-11-26 22:15:04] 2025-11-27 03:14:32,000 | INFO     | 
[2025-11-26 22:15:04] 2025-11-27 03:14:32,000 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 22:15:04] 2025-11-27 03:14:32,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:15:04] 2025-11-27 03:14:32,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,030 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:15:04] 2025-11-27 03:14:32,031 | INFO     | job 6897139661 has completed (purged errors)
[2025-11-26 22:15:04] 2025-11-27 03:14:32,031 | INFO     | overall cleanup function is called
[2025-11-26 22:15:04] 2025-11-27 03:14:33,048 | INFO     | --- collectZombieJob: --- 10, [25409]
[2025-11-26 22:15:04] 2025-11-27 03:14:33,048 | INFO     | zombie collector waiting for pid 25409
[2025-11-26 22:15:04] 2025-11-27 03:14:33,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:15:04] 2025-11-27 03:14:33,049 | INFO     | collected zombie processes
[2025-11-26 22:15:04] 2025-11-27 03:14:33,049 | INFO     | will attempt to kill all subprocesses of pid=25409
[2025-11-26 22:15:04] 2025-11-27 03:14:33,139 | INFO     | process IDs to be killed: [25409] (in reverse order)
[2025-11-26 22:15:04] 2025-11-27 03:14:33,195 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:15:04] 2025-11-27 03:14:33,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:15:04] 2025-11-27 03:14:33,201 | INFO     | did not find any defunct processes belonging to 25409
[2025-11-26 22:15:04] 2025-11-27 03:14:33,205 | INFO     | did not find any defunct processes belonging to 25409
[2025-11-26 22:15:04] 2025-11-27 03:14:33,207 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:15:04] 2025-11-27 03:14:33,208 | INFO     | ready for new job
[2025-11-26 22:15:04] 2025-11-27 03:14:33,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:15:04] 2025-11-27 03:14:33,211 | INFO     | ***************************************
[2025-11-26 22:15:04] 2025-11-27 03:14:33,211 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:15:04] 2025-11-27 03:14:33,211 | INFO     | ***************************************
[2025-11-26 22:15:04] 2025-11-27 03:14:33,211 | INFO     | 
[2025-11-26 22:15:04] 2025-11-27 03:14:33,212 | INFO     | architecture information:
[2025-11-26 22:15:04] 2025-11-27 03:14:33,213 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:15:04] 2025-11-27 03:14:33,231 | INFO     | cat /etc/os-release:
[2025-11-26 22:15:04] NAME="CentOS Linux"
[2025-11-26 22:15:04] VERSION="7 (Core)"
[2025-11-26 22:15:04] ID="centos"
[2025-11-26 22:15:04] ID_LIKE="rhel fedora"
[2025-11-26 22:15:04] VERSION_ID="7"
[2025-11-26 22:15:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:15:04] ANSI_COLOR="0;31"
[2025-11-26 22:15:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:15:04] HOME_URL="https://www.centos.org/"
[2025-11-26 22:15:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:15:04] 
[2025-11-26 22:15:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:15:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:15:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:15:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:15:04] 
[2025-11-26 22:15:04] 2025-11-27 03:14:33,231 | INFO     | ***************************************
[2025-11-26 22:15:04] 2025-11-27 03:14:33,735 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 22:15:04] 2025-11-27 03:14:33,754 | INFO     | sufficient remaining disk space (17457741824 B)
[2025-11-26 22:15:04] 2025-11-27 03:14:33,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:15:04] 2025-11-27 03:14:33,755 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:15:04] 2025-11-27 03:14:33,756 | INFO     | update_server=False
[2025-11-26 22:15:04] 2025-11-27 03:14:33,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:15:04] 2025-11-27 03:14:33,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:15:04] 2025-11-27 03:14:33,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:15:04] 2025-11-27 03:14:34,210 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 22:15:04] 2025-11-27 03:14:34,211 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 22:15:04] 2025-11-27 03:14:34,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:15:04] 2025-11-27 03:14:34,211 | INFO     | will abort loop
[2025-11-26 22:15:04] 2025-11-27 03:14:34,596 | INFO     | all payload control threads have been joined
[2025-11-26 22:15:04] 2025-11-27 03:14:34,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:15:04] 2025-11-27 03:14:34,680 | INFO     | all data control threads have been joined
[2025-11-26 22:15:04] 2025-11-27 03:14:34,762 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:34,763 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:34,847 | INFO     | [job] validate thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:34,905 | INFO     | all job control threads have been joined
[2025-11-26 22:15:04] 2025-11-27 03:14:35,012 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:35,213 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:35,331 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:35,602 | INFO     | [payload] control thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:35,687 | INFO     | [data] control thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:35,757 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:35,902 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:35,910 | INFO     | [job] control thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:36,056 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:36,106 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:36,127 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:36,218 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:38,626 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:15:04] 2025-11-27 03:14:50,472 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:15:04] 2025-11-27 03:14:51,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140435392825152)>', '<ExcThread(monitor, started 140434206611200)>']
[2025-11-26 22:15:04] 2025-11-27 03:14:56,087 | INFO     | all workflow threads have been joined
[2025-11-26 22:15:04] 2025-11-27 03:14:56,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:15:04] 2025-11-27 03:14:56,088 | INFO     | traces error code: 0
[2025-11-26 22:15:04] 2025-11-27 03:14:56,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:15:04] 2025-11-27 03:15:03,652 | INFO     | PID=18919 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 22:15:04] 2025-11-27 03:15:03,652 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:15:04] 2025-11-27 03:15:03,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:15:04] 2025-11-27 03:15:03,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:15:04] 2025-11-27 03:15:03,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:15:04] 2025-11-27 03:15:03,653 | CRITICAL | thread 'MainThread' is not alive
[2025-11-26 22:15:04] 2025-11-27 03:15:03,653 | INFO     | [monitor] control thread has ended
[2025-11-26 22:15:04] 2025-11-27 03:15:03,757 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:15:04] 2025-11-27 03:15:03,761 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:15:04] 2025-11-27 03:15:03,766 [wrapper] pilotpid: 18919
[2025-11-26 22:15:04] 2025-11-27 03:15:03,771 [wrapper] Pilot exit status: 0
[2025-11-26 22:15:04] 2025-11-27 03:15:03,788 [wrapper] pandaids: 6897139661
[2025-11-26 22:15:04] 2025-11-27 03:15:03,832 [wrapper] cleanup supervisor_pilot 10351 18920
[2025-11-26 22:15:04] 2025-11-27 03:15:03,837 [wrapper] Test setup, not cleaning
[2025-11-26 22:15:04] 2025-11-27 03:15:03,841 [wrapper] apfmon messages muted
[2025-11-26 22:15:04] 2025-11-27 03:15:03,845 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:15:04] 2025-11-27 03:15:03,849 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:15:04]  *** Error codes and diagnostics ***
[2025-11-26 22:15:04]     "exeErrorCode": 0,
[2025-11-26 22:15:04]     "exeErrorDiag": "",
[2025-11-26 22:15:04]     "pilotErrorCode": 0,
[2025-11-26 22:15:04]     "pilotErrorDiag": "",
[2025-11-26 22:15:04]  *** Listing of results directory ***
[2025-11-26 22:15:04] total 1323668
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 22:15:04] -rwx------ 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas       100 Nov 26 11:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:15:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 11:00 run_atlas
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas       105 Nov 26 11:00 job.xml
[2025-11-26 22:15:04] -rw-r--r-- 2 boincer umatlas 411464774 Nov 26 11:00 EVNT.47483658._002192.pool.root.1
[2025-11-26 22:15:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 11:00 start_atlas.sh
[2025-11-26 22:15:04] drwxrwx--x 2 boincer umatlas      4096 Nov 26 11:00 shared
[2025-11-26 22:15:04] -rw-r--r-- 2 boincer umatlas    590112 Nov 26 11:00 input.tar.gz
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas         0 Nov 26 11:00 boinc_lockfile
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 11:00 pandaJob.out
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas        57 Nov 26 11:00 setup.sh.local
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas    991855 Nov 26 11:00 agis_schedconf.cvmfs.json
[2025-11-26 22:15:04] drwx------ 5 boincer umatlas      4096 Nov 26 11:00 pilot3
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas       532 Nov 26 22:06 boinc_task_state.xml
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 22:11 init_data.xml
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas 925055124 Nov 26 22:13 HITS.47556161._001759.pool.root.1
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas        95 Nov 26 22:14 pilot_heartbeat.json
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas      1061 Nov 26 22:14 memory_monitor_summary.json
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas   1516240 Nov 26 22:14 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas   1919027 Nov 26 22:14 log.47556161._001759.job.log.tgz.1
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas      8674 Nov 26 22:14 heartbeat.json
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 22:14 boinc_mmap_file
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas        29 Nov 26 22:14 wrapper_checkpoint.txt
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas       815 Nov 26 22:15 pilotlog.txt
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas   5579212 Nov 26 22:15 log.47556161._001759.job.log.1
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas       353 Nov 26 22:15 output.list
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas       620 Nov 26 22:15 runtime_log
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas   7516160 Nov 26 22:15 result.tar.gz
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 22:15 runtime_log.err
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas       668 Nov 26 22:15 M5ENDmTWBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfXJKDmYLeAJo.diag
[2025-11-26 22:15:04] -rw-r--r-- 1 boincer umatlas     21276 Nov 26 22:15 stderr.txt
[2025-11-26 22:15:04] HITS file was successfully produced:
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas 925055124 Nov 26 22:13 shared/HITS.pool.root.1
[2025-11-26 22:15:04]  *** Contents of shared directory: ***
[2025-11-26 22:15:04] total 1313144
[2025-11-26 22:15:04] -rw-r--r-- 2 boincer umatlas 411464774 Nov 26 11:00 ATLAS.root_0
[2025-11-26 22:15:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 11:00 start_atlas.sh
[2025-11-26 22:15:04] -rw-r--r-- 2 boincer umatlas    590112 Nov 26 11:00 input.tar.gz
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas 925055124 Nov 26 22:13 HITS.pool.root.1
[2025-11-26 22:15:04] -rw------- 1 boincer umatlas   7516160 Nov 26 22:15 result.tar.gz
22:15:05 (14824): run_atlas exited; CPU time 312760.295355
22:15:05 (14824): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN