Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:14:30 (717): wrapper (7.7.26015): starting
11:14:30 (717): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 11:14:30] Arguments: --nthreads 8
[2025-11-26 11:14:30] Threads: 8
[2025-11-26 11:14:30] Checking for CVMFS
[2025-11-26 11:14:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:14:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:14:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:14:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:14:31] 2.11.2.0 11495 117927 131696 153326 1 82 11250703 18432000 775 130560 0 84110157 99.974 4997510 25237 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 11:14:31] CVMFS is ok
[2025-11-26 11:14:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:14:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:14:31] Further information can be found at the LHC@home message board.
[2025-11-26 11:14:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:14:31] Checking for apptainer binary...
[2025-11-26 11:14:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:14:31] Running /usr/bin/apptainer --version
[2025-11-26 11:14:31] apptainer version 1.3.2-1.el7
[2025-11-26 11:14:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:14:32] c-206-31.aglt2.org
[2025-11-26 11:14:32] apptainer works
[2025-11-26 11:14:32] Set ATHENA_PROC_NUMBER=8
[2025-11-26 11:14:32] Set ATHENA_CORE_NUMBER=8
[2025-11-26 11:14:32] Starting ATLAS job with PandaID=6897373013
[2025-11-26 11:14:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:43:46]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:43:46] 2025-11-27 11:42:51,103 | INFO     | time since job start (70087s) is within the limit (172800.0s)
[2025-11-27 06:43:46] 2025-11-27 11:42:51,548 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 06:43:46] 2025-11-27 11:42:51,553 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1973.1666666666667
[2025-11-27 06:43:46] 2025-11-27 11:42:51,556 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6897373013/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:43:46] 2025-11-27 11:42:51,556 | INFO     | extracted standard info from prmon json
[2025-11-27 06:43:46] 2025-11-27 11:42:51,556 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:43:46] 2025-11-27 11:42:51,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:43:46] 2025-11-27 11:42:51,572 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:43:46] 2025-11-27 11:42:51,573 | INFO     | sum of square deviations: 470369360962.2001
[2025-11-27 06:43:46] 2025-11-27 11:42:51,597 | INFO     | sum of deviations: 2302673998797.627
[2025-11-27 06:43:46] 2025-11-27 11:42:51,597 | INFO     | mean x: 1764208730.6144474
[2025-11-27 06:43:46] 2025-11-27 11:42:51,598 | INFO     | mean y: 2869521.865970409
[2025-11-27 06:43:46] 2025-11-27 11:42:51,598 | INFO     | intersect: -8633742276.41848
[2025-11-27 06:43:46] 2025-11-27 11:42:51,599 | INFO     | chi2: 5.686262932875516
[2025-11-27 06:43:46] 2025-11-27 11:42:51,600 | INFO     | sum of square deviations: 464255675610.304
[2025-11-27 06:43:46] 2025-11-27 11:42:51,625 | INFO     | sum of deviations: 2654433358718.9614
[2025-11-27 06:43:46] 2025-11-27 11:42:51,625 | INFO     | mean x: 1764208578.117133
[2025-11-27 06:43:46] 2025-11-27 11:42:51,625 | INFO     | mean y: 2878291.4405594408
[2025-11-27 06:43:46] 2025-11-27 11:42:51,625 | INFO     | intersect: -10084180085.037212
[2025-11-27 06:43:46] 2025-11-27 11:42:51,626 | INFO     | chi2: 2.938083486599378
[2025-11-27 06:43:46] 2025-11-27 11:42:51,627 | INFO     | current chi2=2.938083486599378 (change=48.33015072847496 %)
[2025-11-27 06:43:46] 2025-11-27 11:42:51,628 | INFO     | sum of square deviations: 458195200558.39185
[2025-11-27 06:43:46] 2025-11-27 11:42:51,651 | INFO     | sum of deviations: 2769488545068.8867
[2025-11-27 06:43:46] 2025-11-27 11:42:51,651 | INFO     | mean x: 1764208425.619842
[2025-11-27 06:43:46] 2025-11-27 11:42:51,651 | INFO     | mean y: 2881181.172958736
[2025-11-27 06:43:46] 2025-11-27 11:42:51,652 | INFO     | intersect: -10660598095.593294
[2025-11-27 06:43:46] 2025-11-27 11:42:51,652 | INFO     | chi2: 2.3990986370690943
[2025-11-27 06:43:46] 2025-11-27 11:42:51,653 | INFO     | current chi2=2.3990986370690943 (change=18.344776518046466 %)
[2025-11-27 06:43:46] 2025-11-27 11:42:51,653 | INFO     | right removable region: 1138
[2025-11-27 06:43:46] 2025-11-27 11:42:51,654 | INFO     | sum of square deviations: 464255244950.3046
[2025-11-27 06:43:46] 2025-11-27 11:42:51,678 | INFO     | sum of deviations: 2019592789851.982
[2025-11-27 06:43:46] 2025-11-27 11:42:51,678 | INFO     | mean x: 1764208883.117133
[2025-11-27 06:43:46] 2025-11-27 11:42:51,678 | INFO     | mean y: 2876573.0673076925
[2025-11-27 06:43:46] 2025-11-27 11:42:51,678 | INFO     | intersect: -7671745477.82104
[2025-11-27 06:43:46] 2025-11-27 11:42:51,679 | INFO     | chi2: 3.690306585701409
[2025-11-27 06:43:46] 2025-11-27 11:42:51,679 | INFO     | current chi2=3.690306585701409 (change=35.10137274226891 %)
[2025-11-27 06:43:46] 2025-11-27 11:42:51,681 | INFO     | sum of square deviations: 458194339238.39185
[2025-11-27 06:43:46] 2025-11-27 11:42:51,704 | INFO     | sum of deviations: 1924969068459.6
[2025-11-27 06:43:46] 2025-11-27 11:42:51,704 | INFO     | mean x: 1764209035.619842
[2025-11-27 06:43:46] 2025-11-27 11:42:51,704 | INFO     | mean y: 2878953.4424934154
[2025-11-27 06:43:46] 2025-11-27 11:42:51,704 | INFO     | intersect: -7408927638.29766
[2025-11-27 06:43:46] 2025-11-27 11:42:51,705 | INFO     | chi2: 3.5929588301907867
[2025-11-27 06:43:46] 2025-11-27 11:42:51,705 | INFO     | current chi2=3.5929588301907867 (change=2.637931381848033 %)
[2025-11-27 06:43:46] 2025-11-27 11:42:51,705 | INFO     | left removable region: 20
[2025-11-27 06:43:46] 2025-11-27 11:42:51,706 | INFO     | sum of square deviations: 433315634197.96405
[2025-11-27 06:43:46] 2025-11-27 11:42:51,728 | INFO     | sum of deviations: 2251688385126.571
[2025-11-27 06:43:46] 2025-11-27 11:42:51,729 | INFO     | mean x: 1764209005.1270125
[2025-11-27 06:43:46] 2025-11-27 11:42:51,729 | INFO     | mean y: 2894193.967799642
[2025-11-27 06:43:46] 2025-11-27 11:42:51,729 | INFO     | intersect: -9164670076.204248
[2025-11-27 06:43:46] 2025-11-27 11:42:51,730 | INFO     | chi2: 0.23256166063426506
[2025-11-27 06:43:46] 2025-11-27 11:42:51,730 | INFO     | current memory leak: 5.20 B/s (using 1118 data points, chi2=0.23)
[2025-11-27 06:43:46] 2025-11-27 11:42:51,731 | INFO     | could have reported an average CPU frequency of 2564 MHz (42 samples)
[2025-11-27 06:43:46] 2025-11-27 11:42:51,731 | INFO     | ..............................
[2025-11-27 06:43:46] 2025-11-27 11:42:51,731 | INFO     | . Timing measurements:
[2025-11-27 06:43:46] 2025-11-27 11:42:51,731 | INFO     | . get job = 0 s
[2025-11-27 06:43:46] 2025-11-27 11:42:51,731 | INFO     | . initial setup = 2 s
[2025-11-27 06:43:46] 2025-11-27 11:42:51,732 | INFO     | . payload setup = 5 s
[2025-11-27 06:43:46] 2025-11-27 11:42:51,732 | INFO     | . stage-in = 0 s
[2025-11-27 06:43:46] 2025-11-27 11:42:51,732 | INFO     | . payload execution = 70047 s
[2025-11-27 06:43:46] 2025-11-27 11:42:51,732 | INFO     | . stage-out = 3 s
[2025-11-27 06:43:46] 2025-11-27 11:42:51,732 | INFO     | . log creation = 0 s
[2025-11-27 06:43:46] 2025-11-27 11:42:51,732 | INFO     | ..............................
[2025-11-27 06:43:46] 2025-11-27 11:42:51,809 | INFO     | 
[2025-11-27 06:43:46] 2025-11-27 11:42:51,809 | INFO     | job summary report
[2025-11-27 06:43:46] 2025-11-27 11:42:51,810 | INFO     | --------------------------------------------------
[2025-11-27 06:43:46] 2025-11-27 11:42:51,810 | INFO     | PanDA job id: 6897373013
[2025-11-27 06:43:46] 2025-11-27 11:42:51,810 | INFO     | task id: 47556173
[2025-11-27 06:43:46] 2025-11-27 11:42:51,810 | INFO     | errors: (none)
[2025-11-27 06:43:46] 2025-11-27 11:42:51,810 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:43:46] 2025-11-27 11:42:51,810 | INFO     | pilot state: finished 
[2025-11-27 06:43:46] 2025-11-27 11:42:51,810 | INFO     | transexitcode: 0
[2025-11-27 06:43:46] 2025-11-27 11:42:51,810 | INFO     | exeerrorcode: 0
[2025-11-27 06:43:46] 2025-11-27 11:42:51,810 | INFO     | exeerrordiag: 
[2025-11-27 06:43:46] 2025-11-27 11:42:51,810 | INFO     | exitcode: 0
[2025-11-27 06:43:46] 2025-11-27 11:42:51,811 | INFO     | exitmsg: OK
[2025-11-27 06:43:46] 2025-11-27 11:42:51,811 | INFO     | cpuconsumptiontime: 538201 s
[2025-11-27 06:43:46] 2025-11-27 11:42:51,811 | INFO     | nevents: 1000
[2025-11-27 06:43:46] 2025-11-27 11:42:51,811 | INFO     | neventsw: 0
[2025-11-27 06:43:46] 2025-11-27 11:42:51,811 | INFO     | pid: 17506
[2025-11-27 06:43:46] 2025-11-27 11:42:51,811 | INFO     | pgrp: 17506
[2025-11-27 06:43:46] 2025-11-27 11:42:51,811 | INFO     | corecount: 8
[2025-11-27 06:43:46] 2025-11-27 11:42:51,811 | INFO     | event service: False
[2025-11-27 06:43:46] 2025-11-27 11:42:51,811 | INFO     | sizes: {0: 2284263, 8: 2284525, 11: 2284553, 70056: 2341071, 70057: 2341070, 70060: 2350120, 70062: 2350304, 70066: 2350550}
[2025-11-27 06:43:46] 2025-11-27 11:42:51,811 | INFO     | --------------------------------------------------
[2025-11-27 06:43:46] 2025-11-27 11:42:51,812 | INFO     | 
[2025-11-27 06:43:46] 2025-11-27 11:42:51,812 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 06:43:46] 2025-11-27 11:42:51,827 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,827 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,828 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,828 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,829 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:43:46] 2025-11-27 11:42:51,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,830 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:43:46] 2025-11-27 11:42:51,830 | INFO     | job 6897373013 has completed (purged errors)
[2025-11-27 06:43:46] 2025-11-27 11:42:51,830 | INFO     | overall cleanup function is called
[2025-11-27 06:43:46] 2025-11-27 11:42:52,245 | INFO     | PID=4572 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 06:43:46] 2025-11-27 11:42:52,245 | INFO     | .. there are 3 such processes running
[2025-11-27 06:43:46] 2025-11-27 11:42:52,843 | INFO     | --- collectZombieJob: --- 10, [17506]
[2025-11-27 06:43:46] 2025-11-27 11:42:52,843 | INFO     | zombie collector waiting for pid 17506
[2025-11-27 06:43:46] 2025-11-27 11:42:52,843 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:43:46] 2025-11-27 11:42:52,843 | INFO     | collected zombie processes
[2025-11-27 06:43:46] 2025-11-27 11:42:52,843 | INFO     | will attempt to kill all subprocesses of pid=17506
[2025-11-27 06:43:46] 2025-11-27 11:42:52,948 | INFO     | process IDs to be killed: [17506] (in reverse order)
[2025-11-27 06:43:46] 2025-11-27 11:42:52,992 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:43:46] 2025-11-27 11:42:52,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:43:46] 2025-11-27 11:42:52,995 | INFO     | did not find any defunct processes belonging to 17506
[2025-11-27 06:43:46] 2025-11-27 11:42:52,997 | INFO     | did not find any defunct processes belonging to 17506
[2025-11-27 06:43:46] 2025-11-27 11:42:52,999 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:43:46] 2025-11-27 11:42:52,999 | INFO     | ready for new job
[2025-11-27 06:43:46] 2025-11-27 11:42:52,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:43:46] 2025-11-27 11:42:53,003 | INFO     | ***************************************
[2025-11-27 06:43:46] 2025-11-27 11:42:53,003 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:43:46] 2025-11-27 11:42:53,003 | INFO     | ***************************************
[2025-11-27 06:43:46] 2025-11-27 11:42:53,003 | INFO     | 
[2025-11-27 06:43:46] 2025-11-27 11:42:53,004 | INFO     | architecture information:
[2025-11-27 06:43:46] 2025-11-27 11:42:53,005 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:43:46] 2025-11-27 11:42:53,019 | INFO     | cat /etc/os-release:
[2025-11-27 06:43:46] NAME="CentOS Linux"
[2025-11-27 06:43:46] VERSION="7 (Core)"
[2025-11-27 06:43:46] ID="centos"
[2025-11-27 06:43:46] ID_LIKE="rhel fedora"
[2025-11-27 06:43:46] VERSION_ID="7"
[2025-11-27 06:43:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:43:46] ANSI_COLOR="0;31"
[2025-11-27 06:43:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:43:46] HOME_URL="https://www.centos.org/"
[2025-11-27 06:43:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:43:46] 
[2025-11-27 06:43:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:43:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:43:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:43:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:43:46] 
[2025-11-27 06:43:46] 2025-11-27 11:42:53,019 | INFO     | ***************************************
[2025-11-27 06:43:46] 2025-11-27 11:42:53,522 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 06:43:46] 2025-11-27 11:42:53,733 | INFO     | sufficient remaining disk space (24310185984 B)
[2025-11-27 06:43:46] 2025-11-27 11:42:53,733 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:43:46] 2025-11-27 11:42:53,733 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:43:46] 2025-11-27 11:42:53,733 | INFO     | update_server=False
[2025-11-27 06:43:46] 2025-11-27 11:42:53,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:43:46] 2025-11-27 11:42:53,734 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:43:46] 2025-11-27 11:42:53,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:43:46] 2025-11-27 11:42:53,734 | INFO     | aborting loop
[2025-11-27 06:43:46] 2025-11-27 11:42:54,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:43:46] 2025-11-27 11:42:54,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:43:46] 2025-11-27 11:42:54,394 | INFO     | all payload control threads have been joined
[2025-11-27 06:43:46] 2025-11-27 11:42:54,543 | INFO     | all data control threads have been joined
[2025-11-27 06:43:46] 2025-11-27 11:42:54,739 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:54,739 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:54,740 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:54,845 | INFO     | all job control threads have been joined
[2025-11-27 06:43:46] 2025-11-27 11:42:55,399 | INFO     | [payload] control thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:55,410 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:55,548 | INFO     | [data] control thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:55,710 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:55,850 | INFO     | [job] control thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:56,011 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:56,096 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:56,098 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:56,098 | INFO     | [job] validate thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:56,108 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:56,108 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:56,306 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:42:58,239 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:43:46] 2025-11-27 11:43:24,482 | INFO     | PID=4572 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 06:43:46] 2025-11-27 11:43:24,482 | INFO     | .. there are 3 such processes running
[2025-11-27 06:43:46] 2025-11-27 11:43:24,483 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:43:46] 2025-11-27 11:43:24,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:43:46] 2025-11-27 11:43:24,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:43:46] 2025-11-27 11:43:40,523 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:43:46] 2025-11-27 11:43:41,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140372840949568)>', '<ExcThread(monitor, started 140371719866112)>']
[2025-11-27 06:43:46] 2025-11-27 11:43:41,566 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:43:46] 2025-11-27 11:43:41,568 | INFO     | [monitor] control thread has ended
[2025-11-27 06:43:46] 2025-11-27 11:43:46,252 | INFO     | all workflow threads have been joined
[2025-11-27 06:43:46] 2025-11-27 11:43:46,252 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:43:46] 2025-11-27 11:43:46,252 | INFO     | traces error code: 0
[2025-11-27 06:43:46] 2025-11-27 11:43:46,253 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:43:46] 2025-11-27 11:43:46,361 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:43:46] 2025-11-27 11:43:46,363 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:43:46] 2025-11-27 11:43:46,365 [wrapper] pilotpid: 4572
[2025-11-27 06:43:46] 2025-11-27 11:43:46,367 [wrapper] Pilot exit status: 0
[2025-11-27 06:43:46] 2025-11-27 11:43:46,393 [wrapper] pandaids: 6897373013
[2025-11-27 06:43:46] 2025-11-27 11:43:46,423 [wrapper] cleanup supervisor_pilot 22611 4573
[2025-11-27 06:43:46] 2025-11-27 11:43:46,425 [wrapper] Test setup, not cleaning
[2025-11-27 06:43:46] 2025-11-27 11:43:46,427 [wrapper] apfmon messages muted
[2025-11-27 06:43:46] 2025-11-27 11:43:46,430 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:43:46] 2025-11-27 11:43:46,432 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:43:46]  *** Error codes and diagnostics ***
[2025-11-27 06:43:46]     "exeErrorCode": 0,
[2025-11-27 06:43:46]     "exeErrorDiag": "",
[2025-11-27 06:43:46]     "pilotErrorCode": 0,
[2025-11-27 06:43:46]     "pilotErrorDiag": "",
[2025-11-27 06:43:46]  *** Listing of results directory ***
[2025-11-27 06:43:46] total 1317460
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 06:43:46] -rwx------ 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas       100 Nov 26 11:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:43:46] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 11:14 run_atlas
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas       105 Nov 26 11:14 job.xml
[2025-11-27 06:43:46] -rw-r--r-- 2 boincer umatlas 408676781 Nov 26 11:14 EVNT.47483658._003094.pool.root.1
[2025-11-27 06:43:46] drwxrwx--x 2 boincer umatlas      4096 Nov 26 11:14 shared
[2025-11-27 06:43:46] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 11:14 input.tar.gz
[2025-11-27 06:43:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 11:14 start_atlas.sh
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas         0 Nov 26 11:14 boinc_lockfile
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 11:14 pandaJob.out
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas        57 Nov 26 11:14 setup.sh.local
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas    991855 Nov 26 11:14 agis_schedconf.cvmfs.json
[2025-11-27 06:43:46] drwx------ 5 boincer umatlas      4096 Nov 26 11:14 pilot3
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas       533 Nov 27 06:33 boinc_task_state.xml
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas      5954 Nov 27 06:38 init_data.xml
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas 912465505 Nov 27 06:42 HITS.47556173._000765.pool.root.1
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas      1066 Nov 27 06:42 memory_monitor_summary.json
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas        95 Nov 27 06:42 pilot_heartbeat.json
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas   1516240 Nov 27 06:42 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas   2318339 Nov 27 06:42 log.47556173._000765.job.log.tgz.1
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas      8650 Nov 27 06:42 heartbeat.json
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 06:43 boinc_mmap_file
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas        29 Nov 27 06:43 wrapper_checkpoint.txt
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas      4820 Nov 27 06:43 pilotlog.txt
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas   9691581 Nov 27 06:43 log.47556173._000765.job.log.1
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas       353 Nov 27 06:43 output.list
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas       620 Nov 27 06:43 runtime_log
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas  12032000 Nov 27 06:43 result.tar.gz
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 06:43 runtime_log.err
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas       668 Nov 27 06:43 DfeLDm0VBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjSMKDmplo5Xo.diag
[2025-11-27 06:43:46] -rw-r--r-- 1 boincer umatlas     15176 Nov 27 06:43 stderr.txt
[2025-11-27 06:43:46] HITS file was successfully produced:
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas 912465505 Nov 27 06:42 shared/HITS.pool.root.1
[2025-11-27 06:43:46]  *** Contents of shared directory: ***
[2025-11-27 06:43:46] total 1302532
[2025-11-27 06:43:46] -rw-r--r-- 2 boincer umatlas 408676781 Nov 26 11:14 ATLAS.root_0
[2025-11-27 06:43:46] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 11:14 input.tar.gz
[2025-11-27 06:43:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 11:14 start_atlas.sh
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas 912465505 Nov 27 06:42 HITS.pool.root.1
[2025-11-27 06:43:46] -rw------- 1 boincer umatlas  12032000 Nov 27 06:43 result.tar.gz
06:43:47 (717): run_atlas exited; CPU time 536777.576981
06:43:47 (717): called boinc_finish(0)

</stderr_txt>
]]>

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