Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:43:07 (6529): wrapper (7.7.26015): starting
10:43:07 (6529): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 10:43:07] Arguments: --nthreads 8
[2025-11-26 10:43:07] Threads: 8
[2025-11-26 10:43:07] Checking for CVMFS
[2025-11-26 10:43:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:43:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:43:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:43:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:43:07] 2.11.2.0 2910 47611 84304 153326 3 82 18521264 20275200 1 130560 0 6560631 99.630 3064308 28429 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 10:43:07] CVMFS is ok
[2025-11-26 10:43:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:43:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:43:07] Further information can be found at the LHC@home message board.
[2025-11-26 10:43:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:43:07] Checking for apptainer binary...
[2025-11-26 10:43:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:43:07] Running /usr/bin/apptainer --version
[2025-11-26 10:43:07] apptainer version 1.3.2-1.el7
[2025-11-26 10:43:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:43:09] c-204-13.aglt2.org
[2025-11-26 10:43:09] apptainer works
[2025-11-26 10:43:09] Set ATHENA_PROC_NUMBER=8
[2025-11-26 10:43:09] Set ATHENA_CORE_NUMBER=8
[2025-11-26 10:43:09] Starting ATLAS job with PandaID=6897394924
[2025-11-26 10:43:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:57:49]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:57:49] 2025-11-27 03:57:14,105 | INFO     | time since job start (44026s) is within the limit (172800.0s)
[2025-11-26 22:57:49] 2025-11-27 03:57:15,205 | INFO     | monitor loop #3232: job 0:6897394924 is in state 'finished'
[2025-11-26 22:57:49] 2025-11-27 03:57:15,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,109 | INFO     | time since job start (44028s) is within the limit (172800.0s)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,457 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 22:57:49] 2025-11-27 03:57:16,462 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-26 22:57:49] 2025-11-27 03:57:16,465 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897394924/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,465 | INFO     | extracted standard info from prmon json
[2025-11-26 22:57:49] 2025-11-27 03:57:16,466 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 22:57:49] 2025-11-27 03:57:16,466 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 22:57:49] 2025-11-27 03:57:16,478 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:57:49] 2025-11-27 03:57:16,479 | INFO     | sum of square deviations: 116220966305.96068
[2025-11-26 22:57:49] 2025-11-27 03:57:16,491 | INFO     | sum of deviations: 763003352511.854
[2025-11-26 22:57:49] 2025-11-27 03:57:16,491 | INFO     | mean x: 1764193801.6407766
[2025-11-26 22:57:49] 2025-11-27 03:57:16,491 | INFO     | mean y: 3233409.4743411927
[2025-11-26 22:57:49] 2025-11-27 03:57:16,491 | INFO     | intersect: -11578891812.139034
[2025-11-26 22:57:49] 2025-11-27 03:57:16,492 | INFO     | chi2: 5.777738851447593
[2025-11-26 22:57:49] 2025-11-27 03:57:16,493 | INFO     | sum of square deviations: 113819927308.8937
[2025-11-26 22:57:49] 2025-11-27 03:57:16,504 | INFO     | sum of deviations: 1028273624637.0839
[2025-11-26 22:57:49] 2025-11-27 03:57:16,504 | INFO     | mean x: 1764193649.1452515
[2025-11-26 22:57:49] 2025-11-27 03:57:16,504 | INFO     | mean y: 3250252.4511173186
[2025-11-26 22:57:49] 2025-11-27 03:57:16,504 | INFO     | intersect: -15934853391.255594
[2025-11-26 22:57:49] 2025-11-27 03:57:16,505 | INFO     | chi2: 2.7133619321613347
[2025-11-26 22:57:49] 2025-11-27 03:57:16,505 | INFO     | current chi2=2.7133619321613347 (change=53.037650161680276 %)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,506 | INFO     | sum of square deviations: 111452147830.0957
[2025-11-26 22:57:49] 2025-11-27 03:57:16,517 | INFO     | sum of deviations: 1096635727120.6024
[2025-11-26 22:57:49] 2025-11-27 03:57:16,518 | INFO     | mean x: 1764193496.6483827
[2025-11-26 22:57:49] 2025-11-27 03:57:16,518 | INFO     | mean y: 3254642.046413502
[2025-11-26 22:57:49] 2025-11-27 03:57:16,518 | INFO     | intersect: -17355563968.858917
[2025-11-26 22:57:49] 2025-11-27 03:57:16,519 | INFO     | chi2: 2.3323752582814645
[2025-11-26 22:57:49] 2025-11-27 03:57:16,519 | INFO     | current chi2=2.3323752582814645 (change=14.041129912086381 %)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,519 | INFO     | right removable region: 710
[2025-11-26 22:57:49] 2025-11-27 03:57:16,520 | INFO     | sum of square deviations: 113819645488.89377
[2025-11-26 22:57:49] 2025-11-27 03:57:16,531 | INFO     | sum of deviations: 542457050924.54193
[2025-11-26 22:57:49] 2025-11-27 03:57:16,531 | INFO     | mean x: 1764193954.1452515
[2025-11-26 22:57:49] 2025-11-27 03:57:16,531 | INFO     | mean y: 3247393.100558659
[2025-11-26 22:57:49] 2025-11-27 03:57:16,532 | INFO     | intersect: -8404786611.169129
[2025-11-26 22:57:49] 2025-11-27 03:57:16,532 | INFO     | chi2: 3.5670239025432053
[2025-11-26 22:57:49] 2025-11-27 03:57:16,532 | INFO     | current chi2=3.5670239025432053 (change=38.26263190054878 %)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,533 | INFO     | sum of square deviations: 111451627621.79736
[2025-11-26 22:57:49] 2025-11-27 03:57:16,544 | INFO     | sum of deviations: 502139831303.3092
[2025-11-26 22:57:49] 2025-11-27 03:57:16,545 | INFO     | mean x: 1764194106.649789
[2025-11-26 22:57:49] 2025-11-27 03:57:16,545 | INFO     | mean y: 3249988.053445851
[2025-11-26 22:57:49] 2025-11-27 03:57:16,545 | INFO     | intersect: -7945239863.575793
[2025-11-26 22:57:49] 2025-11-27 03:57:16,546 | INFO     | chi2: 3.5367769212241145
[2025-11-26 22:57:49] 2025-11-27 03:57:16,546 | INFO     | current chi2=3.5367769212241145 (change=0.8479612737533235 %)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,546 | INFO     | left removable region: 20
[2025-11-26 22:57:49] 2025-11-27 03:57:16,547 | INFO     | sum of square deviations: 101865122076.46371
[2025-11-26 22:57:49] 2025-11-27 03:57:16,557 | INFO     | sum of deviations: 785531916616.1018
[2025-11-26 22:57:49] 2025-11-27 03:57:16,557 | INFO     | mean x: 1764194076.1594203
[2025-11-26 22:57:49] 2025-11-27 03:57:16,557 | INFO     | mean y: 3274738.8536231886
[2025-11-26 22:57:49] 2025-11-27 03:57:16,558 | INFO     | intersect: -13601291040.66831
[2025-11-26 22:57:49] 2025-11-27 03:57:16,558 | INFO     | chi2: 0.0608654885924903
[2025-11-26 22:57:49] 2025-11-27 03:57:16,558 | INFO     | current memory leak: 7.71 B/s (using 690 data points, chi2=0.06)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,559 | INFO     | could have reported an average CPU frequency of 2159 MHz (28 samples)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,559 | INFO     | ..............................
[2025-11-26 22:57:49] 2025-11-27 03:57:16,560 | INFO     | . Timing measurements:
[2025-11-26 22:57:49] 2025-11-27 03:57:16,560 | INFO     | . get job = 0 s
[2025-11-26 22:57:49] 2025-11-27 03:57:16,560 | INFO     | . initial setup = 2 s
[2025-11-26 22:57:49] 2025-11-27 03:57:16,560 | INFO     | . payload setup = 9 s
[2025-11-26 22:57:49] 2025-11-27 03:57:16,560 | INFO     | . stage-in = 0 s
[2025-11-26 22:57:49] 2025-11-27 03:57:16,560 | INFO     | . payload execution = 43985 s
[2025-11-26 22:57:49] 2025-11-27 03:57:16,560 | INFO     | . stage-out = 3 s
[2025-11-26 22:57:49] 2025-11-27 03:57:16,560 | INFO     | . log creation = 0 s
[2025-11-26 22:57:49] 2025-11-27 03:57:16,561 | INFO     | ..............................
[2025-11-26 22:57:49] 2025-11-27 03:57:16,937 | INFO     | 
[2025-11-26 22:57:49] 2025-11-27 03:57:16,937 | INFO     | job summary report
[2025-11-26 22:57:49] 2025-11-27 03:57:16,938 | INFO     | --------------------------------------------------
[2025-11-26 22:57:49] 2025-11-27 03:57:16,938 | INFO     | PanDA job id: 6897394924
[2025-11-26 22:57:49] 2025-11-27 03:57:16,938 | INFO     | task id: 47556161
[2025-11-26 22:57:49] 2025-11-27 03:57:16,938 | INFO     | errors: (none)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,938 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:57:49] 2025-11-27 03:57:16,939 | INFO     | pilot state: finished 
[2025-11-26 22:57:49] 2025-11-27 03:57:16,939 | INFO     | transexitcode: 0
[2025-11-26 22:57:49] 2025-11-27 03:57:16,939 | INFO     | exeerrorcode: 0
[2025-11-26 22:57:49] 2025-11-27 03:57:16,939 | INFO     | exeerrordiag: 
[2025-11-26 22:57:49] 2025-11-27 03:57:16,939 | INFO     | exitcode: 0
[2025-11-26 22:57:49] 2025-11-27 03:57:16,939 | INFO     | exitmsg: OK
[2025-11-26 22:57:49] 2025-11-27 03:57:16,939 | INFO     | cpuconsumptiontime: 341504 s
[2025-11-26 22:57:49] 2025-11-27 03:57:16,940 | INFO     | nevents: 1000
[2025-11-26 22:57:49] 2025-11-27 03:57:16,940 | INFO     | neventsw: 0
[2025-11-26 22:57:49] 2025-11-27 03:57:16,940 | INFO     | pid: 17616
[2025-11-26 22:57:49] 2025-11-27 03:57:16,940 | INFO     | pgrp: 17616
[2025-11-26 22:57:49] 2025-11-27 03:57:16,940 | INFO     | corecount: 8
[2025-11-26 22:57:49] 2025-11-27 03:57:16,940 | INFO     | event service: False
[2025-11-26 22:57:49] 2025-11-27 03:57:16,940 | INFO     | sizes: {0: 2284265, 6: 2284527, 11: 2284555, 43998: 2330118, 43999: 2330117, 44003: 2339167, 44004: 2339351, 44011: 2339597}
[2025-11-26 22:57:49] 2025-11-27 03:57:16,940 | INFO     | --------------------------------------------------
[2025-11-26 22:57:49] 2025-11-27 03:57:16,940 | INFO     | 
[2025-11-26 22:57:49] 2025-11-27 03:57:16,941 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 22:57:49] 2025-11-27 03:57:16,972 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,973 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,973 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,973 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,974 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:57:49] 2025-11-27 03:57:16,976 | INFO     | job 6897394924 has completed (purged errors)
[2025-11-26 22:57:49] 2025-11-27 03:57:16,977 | INFO     | overall cleanup function is called
[2025-11-26 22:57:49] 2025-11-27 03:57:17,992 | INFO     | --- collectZombieJob: --- 10, [17616]
[2025-11-26 22:57:49] 2025-11-27 03:57:17,993 | INFO     | zombie collector waiting for pid 17616
[2025-11-26 22:57:49] 2025-11-27 03:57:17,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:57:49] 2025-11-27 03:57:17,993 | INFO     | collected zombie processes
[2025-11-26 22:57:49] 2025-11-27 03:57:17,993 | INFO     | will attempt to kill all subprocesses of pid=17616
[2025-11-26 22:57:49] 2025-11-27 03:57:18,088 | INFO     | process IDs to be killed: [17616] (in reverse order)
[2025-11-26 22:57:49] 2025-11-27 03:57:18,147 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:57:49] 2025-11-27 03:57:18,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:57:49] 2025-11-27 03:57:18,150 | INFO     | did not find any defunct processes belonging to 17616
[2025-11-26 22:57:49] 2025-11-27 03:57:18,153 | INFO     | did not find any defunct processes belonging to 17616
[2025-11-26 22:57:49] 2025-11-27 03:57:18,156 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:57:49] 2025-11-27 03:57:18,156 | INFO     | ready for new job
[2025-11-26 22:57:49] 2025-11-27 03:57:18,156 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:57:49] 2025-11-27 03:57:18,160 | INFO     | ***************************************
[2025-11-26 22:57:49] 2025-11-27 03:57:18,160 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:57:49] 2025-11-27 03:57:18,161 | INFO     | ***************************************
[2025-11-26 22:57:49] 2025-11-27 03:57:18,161 | INFO     | 
[2025-11-26 22:57:49] 2025-11-27 03:57:18,161 | INFO     | architecture information:
[2025-11-26 22:57:49] 2025-11-27 03:57:18,162 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:57:49] 2025-11-27 03:57:18,180 | INFO     | cat /etc/os-release:
[2025-11-26 22:57:49] NAME="CentOS Linux"
[2025-11-26 22:57:49] VERSION="7 (Core)"
[2025-11-26 22:57:49] ID="centos"
[2025-11-26 22:57:49] ID_LIKE="rhel fedora"
[2025-11-26 22:57:49] VERSION_ID="7"
[2025-11-26 22:57:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:57:49] ANSI_COLOR="0;31"
[2025-11-26 22:57:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:57:49] HOME_URL="https://www.centos.org/"
[2025-11-26 22:57:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:57:49] 
[2025-11-26 22:57:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:57:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:57:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:57:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:57:49] 
[2025-11-26 22:57:49] 2025-11-27 03:57:18,181 | INFO     | ***************************************
[2025-11-26 22:57:49] 2025-11-27 03:57:18,684 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 22:57:49] 2025-11-27 03:57:18,706 | INFO     | sufficient remaining disk space (17466130432 B)
[2025-11-26 22:57:49] 2025-11-27 03:57:18,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:57:49] 2025-11-27 03:57:18,707 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:57:49] 2025-11-27 03:57:18,707 | INFO     | update_server=False
[2025-11-26 22:57:49] 2025-11-27 03:57:18,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:57:49] 2025-11-27 03:57:18,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:57:49] 2025-11-27 03:57:18,714 | INFO     | aborting loop
[2025-11-26 22:57:49] 2025-11-27 03:57:18,856 | INFO     | all job control threads have been joined
[2025-11-26 22:57:49] 2025-11-27 03:57:19,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:57:49] 2025-11-27 03:57:19,044 | INFO     | all data control threads have been joined
[2025-11-26 22:57:49] 2025-11-27 03:57:19,136 | INFO     | all payload control threads have been joined
[2025-11-26 22:57:49] 2025-11-27 03:57:19,713 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:19,719 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:19,862 | INFO     | [job] control thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:20,045 | INFO     | [data] control thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:20,068 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:20,106 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:20,134 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:20,139 | INFO     | [payload] control thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:20,203 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:20,547 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:20,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:57:49] 2025-11-27 03:57:20,591 | INFO     | [job] validate thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:20,786 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:20,869 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:21,026 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:21,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:57:49] 2025-11-27 03:57:22,672 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:24,592 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:57:49] 2025-11-27 03:57:41,162 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:57:49] 2025-11-27 03:57:43,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747378837312)>', '<ExcThread(monitor, started 139746424649472)>']
[2025-11-26 22:57:49] 2025-11-27 03:57:48,138 | INFO     | all workflow threads have been joined
[2025-11-26 22:57:49] 2025-11-27 03:57:48,139 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:57:49] 2025-11-27 03:57:48,139 | INFO     | traces error code: 0
[2025-11-26 22:57:49] 2025-11-27 03:57:48,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:57:49] 2025-11-27 03:57:49,335 | INFO     | PID=10207 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 22:57:49] 2025-11-27 03:57:49,336 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:57:49] 2025-11-27 03:57:49,336 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:57:49] 2025-11-27 03:57:49,336 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:57:49] 2025-11-27 03:57:49,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:57:49] 2025-11-27 03:57:49,336 | INFO     | [monitor] control thread has ended
[2025-11-26 22:57:49] 2025-11-27 03:57:49,450 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:57:49] 2025-11-27 03:57:49,455 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:57:49] 2025-11-27 03:57:49,460 [wrapper] pilotpid: 10207
[2025-11-26 22:57:49] 2025-11-27 03:57:49,465 [wrapper] Pilot exit status: 0
[2025-11-26 22:57:49] 2025-11-27 03:57:49,484 [wrapper] pandaids: 6897394924
[2025-11-26 22:57:49] 2025-11-27 03:57:49,530 [wrapper] cleanup supervisor_pilot  3986 10208
[2025-11-26 22:57:49] 2025-11-27 03:57:49,535 [wrapper] Test setup, not cleaning
[2025-11-26 22:57:49] 2025-11-27 03:57:49,539 [wrapper] apfmon messages muted
[2025-11-26 22:57:49] 2025-11-27 03:57:49,543 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:57:49] 2025-11-27 03:57:49,548 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:57:49]  *** Error codes and diagnostics ***
[2025-11-26 22:57:49]     "exeErrorCode": 0,
[2025-11-26 22:57:49]     "exeErrorDiag": "",
[2025-11-26 22:57:49]     "pilotErrorCode": 0,
[2025-11-26 22:57:49]     "pilotErrorDiag": "",
[2025-11-26 22:57:49]  *** Listing of results directory ***
[2025-11-26 22:57:49] total 1315368
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 22:57:49] -rwx------ 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas       100 Nov 26 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:57:49] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 10:43 run_atlas
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas       105 Nov 26 10:43 job.xml
[2025-11-26 22:57:49] -rw-r--r-- 2 boincer umatlas 408796449 Nov 26 10:43 EVNT.47483658._002242.pool.root.1
[2025-11-26 22:57:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 10:43 start_atlas.sh
[2025-11-26 22:57:49] drwxrwx--x 2 boincer umatlas      4096 Nov 26 10:43 shared
[2025-11-26 22:57:49] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 10:43 input.tar.gz
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas         0 Nov 26 10:43 boinc_lockfile
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 10:43 pandaJob.out
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas        57 Nov 26 10:43 setup.sh.local
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas    991855 Nov 26 10:43 agis_schedconf.cvmfs.json
[2025-11-26 22:57:49] drwx------ 5 boincer umatlas      4096 Nov 26 10:43 pilot3
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas       532 Nov 26 22:47 boinc_task_state.xml
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 22:49 init_data.xml
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas 918150786 Nov 26 22:56 HITS.47556161._002256.pool.root.1
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas      1062 Nov 26 22:57 memory_monitor_summary.json
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas   1516240 Nov 26 22:57 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas   1979139 Nov 26 22:57 log.47556161._002256.job.log.tgz.1
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas      8672 Nov 26 22:57 heartbeat.json
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 22:57 boinc_mmap_file
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas        29 Nov 26 22:57 wrapper_checkpoint.txt
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas        95 Nov 26 22:57 pilot_heartbeat.json
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas       745 Nov 26 22:57 pilotlog.txt
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas   6055577 Nov 26 22:57 log.47556161._002256.job.log.1
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas       353 Nov 26 22:57 output.list
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas       620 Nov 26 22:57 runtime_log
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas   8058880 Nov 26 22:57 result.tar.gz
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 22:57 runtime_log.err
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas       668 Nov 26 22:57 iRdNDmzVBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdRMKDm7lgJvm.diag
[2025-11-26 22:57:49] -rw-r--r-- 1 boincer umatlas     21320 Nov 26 22:57 stderr.txt
[2025-11-26 22:57:49] HITS file was successfully produced:
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas 918150786 Nov 26 22:56 shared/HITS.pool.root.1
[2025-11-26 22:57:49]  *** Contents of shared directory: ***
[2025-11-26 22:57:49] total 1304320
[2025-11-26 22:57:49] -rw-r--r-- 2 boincer umatlas 408796449 Nov 26 10:43 ATLAS.root_0
[2025-11-26 22:57:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 10:43 start_atlas.sh
[2025-11-26 22:57:49] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 10:43 input.tar.gz
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas 918150786 Nov 26 22:56 HITS.pool.root.1
[2025-11-26 22:57:49] -rw------- 1 boincer umatlas   8058880 Nov 26 22:57 result.tar.gz
22:57:51 (6529): run_atlas exited; CPU time 339245.241811
22:57:51 (6529): called boinc_finish(0)

</stderr_txt>
]]>

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