Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:04:33 (4180288): wrapper (7.7.26015): starting
12:04:33 (4180288): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 12:04:33] Arguments: --nthreads 8
[2025-11-26 12:04:33] Threads: 8
[2025-11-26 12:04:33] Checking for CVMFS
[2025-11-26 12:04:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 12:04:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 12:04:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 12:04:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 12:04:34] 2.13.3.0 12977 30324 389880 153328 0 790 21180175 32935937 44724 16776704 0 160992796 99.565 177392627 32640 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 12:04:34] CVMFS is ok
[2025-11-26 12:04:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 12:04:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 12:04:34] Further information can be found at the LHC@home message board.
[2025-11-26 12:04:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 12:04:34] Checking for apptainer binary...
[2025-11-26 12:04:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 12:04:34] Running /usr/bin/apptainer --version
[2025-11-26 12:04:34] apptainer version 1.4.4-1.el9
[2025-11-26 12:04:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 12:04:35] c6-12-29-1.aglt2.org
[2025-11-26 12:04:35] apptainer works
[2025-11-26 12:04:35] Set ATHENA_PROC_NUMBER=8
[2025-11-26 12:04:35] Set ATHENA_CORE_NUMBER=8
[2025-11-26 12:04:35] Starting ATLAS job with PandaID=6896990440
[2025-11-26 12:04:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:01:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:01:04] 2025-11-27 08:00:28,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:01:04] 2025-11-27 08:00:28,153 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:01:04] 2025-11-27 08:00:28,155 | INFO     | sum of square deviations: 210597261975.9342
[2025-11-27 03:01:04] 2025-11-27 08:00:28,195 | INFO     | sum of deviations: 972957005175.032
[2025-11-27 03:01:04] 2025-11-27 08:00:28,195 | INFO     | mean x: 1764203561.4186575
[2025-11-27 03:01:04] 2025-11-27 08:00:28,196 | INFO     | mean y: 2874474.3151308303
[2025-11-27 03:01:04] 2025-11-27 08:00:28,196 | INFO     | intersect: -8147726333.748428
[2025-11-27 03:01:04] 2025-11-27 08:00:28,201 | INFO     | chi2: 10.133325478023957
[2025-11-27 03:01:04] 2025-11-27 08:00:28,203 | INFO     | sum of square deviations: 207024300883.31332
[2025-11-27 03:01:04] 2025-11-27 08:00:28,239 | INFO     | sum of deviations: 1261236505009.4014
[2025-11-27 03:01:04] 2025-11-27 08:00:28,239 | INFO     | mean x: 1764203408.9267735
[2025-11-27 03:01:04] 2025-11-27 08:00:28,240 | INFO     | mean y: 2886778.7093821513
[2025-11-27 03:01:04] 2025-11-27 08:00:28,240 | INFO     | intersect: -10745019298.532307
[2025-11-27 03:01:04] 2025-11-27 08:00:28,241 | INFO     | chi2: 7.1152525717257324
[2025-11-27 03:01:04] 2025-11-27 08:00:28,241 | INFO     | current chi2=7.1152525717257324 (change=29.78363729501722 %)
[2025-11-27 03:01:04] 2025-11-27 08:00:28,247 | INFO     | sum of square deviations: 203491991715.57687
[2025-11-27 03:01:04] 2025-11-27 08:00:28,307 | INFO     | sum of deviations: 1525922243293.5405
[2025-11-27 03:01:04] 2025-11-27 08:00:28,307 | INFO     | mean x: 1764203256.4349828
[2025-11-27 03:01:04] 2025-11-27 08:00:28,307 | INFO     | mean y: 2898192.1334867664
[2025-11-27 03:01:04] 2025-11-27 08:00:28,308 | INFO     | intersect: -13226305414.304892
[2025-11-27 03:01:04] 2025-11-27 08:00:28,309 | INFO     | chi2: 4.285440004112394
[2025-11-27 03:01:04] 2025-11-27 08:00:28,309 | INFO     | current chi2=4.285440004112394 (change=39.7710768393285 %)
[2025-11-27 03:01:04] 2025-11-27 08:00:28,310 | INFO     | sum of square deviations: 199999942766.8703
[2025-11-27 03:01:04] 2025-11-27 08:00:28,357 | INFO     | sum of deviations: 1614647113390.1057
[2025-11-27 03:01:04] 2025-11-27 08:00:28,357 | INFO     | mean x: 1764203103.9398148
[2025-11-27 03:01:04] 2025-11-27 08:00:28,357 | INFO     | mean y: 2902065.2905092593
[2025-11-27 03:01:04] 2025-11-27 08:00:28,357 | INFO     | intersect: -14239929256.569984
[2025-11-27 03:01:04] 2025-11-27 08:00:28,358 | INFO     | chi2: 3.8951169905223706
[2025-11-27 03:01:04] 2025-11-27 08:00:28,358 | INFO     | current chi2=3.8951169905223706 (change=9.108119894700707 %)
[2025-11-27 03:01:04] 2025-11-27 08:00:28,359 | INFO     | right removable region: 863
[2025-11-27 03:01:04] 2025-11-27 08:00:28,360 | INFO     | sum of square deviations: 207023540213.3134
[2025-11-27 03:01:04] 2025-11-27 08:00:28,367 | INFO     | time since job start (53716s) is within the limit (172800.0s)
[2025-11-27 03:01:04] 2025-11-27 08:00:28,376 | INFO     | sum of deviations: 663294344049.5496
[2025-11-27 03:01:04] 2025-11-27 08:00:28,376 | INFO     | mean x: 1764203713.9267735
[2025-11-27 03:01:04] 2025-11-27 08:00:28,376 | INFO     | mean y: 2887683.805491991
[2025-11-27 03:01:04] 2025-11-27 08:00:28,377 | INFO     | intersect: -5649543648.366198
[2025-11-27 03:01:04] 2025-11-27 08:00:28,378 | INFO     | chi2: 6.920061462360135
[2025-11-27 03:01:04] 2025-11-27 08:00:28,378 | INFO     | current chi2=6.920061462360135 (change=31.709866841170715 %)
[2025-11-27 03:01:04] 2025-11-27 08:00:28,379 | INFO     | sum of square deviations: 203490683395.03787
[2025-11-27 03:01:04] 2025-11-27 08:00:28,395 | INFO     | sum of deviations: 561776106490.1376
[2025-11-27 03:01:04] 2025-11-27 08:00:28,395 | INFO     | mean x: 1764203866.4303796
[2025-11-27 03:01:04] 2025-11-27 08:00:28,395 | INFO     | mean y: 2892060.911392405
[2025-11-27 03:01:04] 2025-11-27 08:00:28,395 | INFO     | intersect: -4867540150.543223
[2025-11-27 03:01:04] 2025-11-27 08:00:28,396 | INFO     | chi2: 6.564453194095318
[2025-11-27 03:01:04] 2025-11-27 08:00:28,397 | INFO     | current chi2=6.564453194095318 (change=5.138802165256117 %)
[2025-11-27 03:01:04] 2025-11-27 08:00:28,397 | INFO     | left removable region: 20
[2025-11-27 03:01:04] 2025-11-27 08:00:28,398 | INFO     | sum of square deviations: 185767936966.8042
[2025-11-27 03:01:04] 2025-11-27 08:00:28,412 | INFO     | sum of deviations: 1105710434622.9927
[2025-11-27 03:01:04] 2025-11-27 08:00:28,412 | INFO     | mean x: 1764203683.4519572
[2025-11-27 03:01:04] 2025-11-27 08:00:28,412 | INFO     | mean y: 2925314.9134045076
[2025-11-27 03:01:04] 2025-11-27 08:00:28,412 | INFO     | intersect: -10497801847.394094
[2025-11-27 03:01:04] 2025-11-27 08:00:28,413 | INFO     | chi2: 0.16699259296088778
[2025-11-27 03:01:04] 2025-11-27 08:00:28,414 | INFO     | current memory leak: 5.95 B/s (using 843 data points, chi2=0.17)
[2025-11-27 03:01:04] 2025-11-27 08:00:28,415 | INFO     | could have reported an average CPU frequency of 2633 MHz (33 samples)
[2025-11-27 03:01:04] 2025-11-27 08:00:28,415 | INFO     | ..............................
[2025-11-27 03:01:04] 2025-11-27 08:00:28,415 | INFO     | . Timing measurements:
[2025-11-27 03:01:04] 2025-11-27 08:00:28,415 | INFO     | . get job = 0 s
[2025-11-27 03:01:04] 2025-11-27 08:00:28,415 | INFO     | . initial setup = 4 s
[2025-11-27 03:01:04] 2025-11-27 08:00:28,415 | INFO     | . payload setup = 18 s
[2025-11-27 03:01:04] 2025-11-27 08:00:28,416 | INFO     | . stage-in = 0 s
[2025-11-27 03:01:04] 2025-11-27 08:00:28,416 | INFO     | . payload execution = 53626 s
[2025-11-27 03:01:04] 2025-11-27 08:00:28,416 | INFO     | . stage-out = 5 s
[2025-11-27 03:01:04] 2025-11-27 08:00:28,416 | INFO     | . log creation = 1 s
[2025-11-27 03:01:04] 2025-11-27 08:00:28,416 | INFO     | ..............................
[2025-11-27 03:01:04] 2025-11-27 08:00:28,563 | INFO     | 
[2025-11-27 03:01:04] 2025-11-27 08:00:28,563 | INFO     | job summary report
[2025-11-27 03:01:04] 2025-11-27 08:00:28,563 | INFO     | --------------------------------------------------
[2025-11-27 03:01:04] 2025-11-27 08:00:28,563 | INFO     | PanDA job id: 6896990440
[2025-11-27 03:01:04] 2025-11-27 08:00:28,563 | INFO     | task id: 47556161
[2025-11-27 03:01:04] 2025-11-27 08:00:28,563 | INFO     | errors: (none)
[2025-11-27 03:01:04] 2025-11-27 08:00:28,563 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:01:04] 2025-11-27 08:00:28,563 | INFO     | pilot state: finished 
[2025-11-27 03:01:04] 2025-11-27 08:00:28,563 | INFO     | transexitcode: 0
[2025-11-27 03:01:04] 2025-11-27 08:00:28,563 | INFO     | exeerrorcode: 0
[2025-11-27 03:01:04] 2025-11-27 08:00:28,563 | INFO     | exeerrordiag: 
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | exitcode: 0
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | exitmsg: OK
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | cpuconsumptiontime: 281648 s
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | nevents: 1000
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | neventsw: 0
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | pid: 9453
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | pgrp: 9453
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | corecount: 8
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | event service: False
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 15: 2284583, 23: 2284611, 53649: 2333972, 53656: 2342966, 53657: 2343022, 53683: 2343332}
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | --------------------------------------------------
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | 
[2025-11-27 03:01:04] 2025-11-27 08:00:28,564 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 03:01:04] 2025-11-27 08:00:28,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,620 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,620 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,620 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,622 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:01:04] 2025-11-27 08:00:28,622 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,622 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:01:04] 2025-11-27 08:00:28,622 | INFO     | job 6896990440 has completed (purged errors)
[2025-11-27 03:01:04] 2025-11-27 08:00:28,622 | INFO     | overall cleanup function is called
[2025-11-27 03:01:04] 2025-11-27 08:00:29,644 | INFO     | --- collectZombieJob: --- 10, [9453]
[2025-11-27 03:01:04] 2025-11-27 08:00:29,645 | INFO     | zombie collector waiting for pid 9453
[2025-11-27 03:01:04] 2025-11-27 08:00:29,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:01:04] 2025-11-27 08:00:29,645 | INFO     | collected zombie processes
[2025-11-27 03:01:04] 2025-11-27 08:00:29,645 | INFO     | will attempt to kill all subprocesses of pid=9453
[2025-11-27 03:01:04] 2025-11-27 08:00:30,433 | INFO     | process IDs to be killed: [9453] (in reverse order)
[2025-11-27 03:01:04] 2025-11-27 08:00:30,984 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:01:04] 2025-11-27 08:00:30,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:01:04] 2025-11-27 08:00:31,023 | INFO     | did not find any defunct processes belonging to 9453
[2025-11-27 03:01:04] 2025-11-27 08:00:31,050 | INFO     | did not find any defunct processes belonging to 9453
[2025-11-27 03:01:04] 2025-11-27 08:00:31,052 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:01:04] 2025-11-27 08:00:31,052 | INFO     | ready for new job
[2025-11-27 03:01:04] 2025-11-27 08:00:31,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:01:04] 2025-11-27 08:00:31,057 | INFO     | ***************************************
[2025-11-27 03:01:04] 2025-11-27 08:00:31,057 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:01:04] 2025-11-27 08:00:31,057 | INFO     | ***************************************
[2025-11-27 03:01:04] 2025-11-27 08:00:31,057 | INFO     | 
[2025-11-27 03:01:04] 2025-11-27 08:00:31,063 | INFO     | architecture information:
[2025-11-27 03:01:04] 2025-11-27 08:00:31,064 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:01:04] 2025-11-27 08:00:31,185 | INFO     | cat /etc/os-release:
[2025-11-27 03:01:04] NAME="CentOS Linux"
[2025-11-27 03:01:04] VERSION="7 (Core)"
[2025-11-27 03:01:04] ID="centos"
[2025-11-27 03:01:04] ID_LIKE="rhel fedora"
[2025-11-27 03:01:04] VERSION_ID="7"
[2025-11-27 03:01:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:01:04] ANSI_COLOR="0;31"
[2025-11-27 03:01:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:01:04] HOME_URL="https://www.centos.org/"
[2025-11-27 03:01:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:01:04] 
[2025-11-27 03:01:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:01:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:01:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:01:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:01:04] 
[2025-11-27 03:01:04] 2025-11-27 08:00:31,186 | INFO     | ***************************************
[2025-11-27 03:01:04] 2025-11-27 08:00:31,689 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 03:01:04] 2025-11-27 08:00:31,725 | INFO     | sufficient remaining disk space (87573921792 B)
[2025-11-27 03:01:04] 2025-11-27 08:00:31,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:01:04] 2025-11-27 08:00:31,725 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:01:04] 2025-11-27 08:00:31,726 | INFO     | update_server=False
[2025-11-27 03:01:04] 2025-11-27 08:00:31,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:01:04] 2025-11-27 08:00:31,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:01:04] 2025-11-27 08:00:32,055 | INFO     | all job control threads have been joined
[2025-11-27 03:01:04] 2025-11-27 08:00:32,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:01:04] 2025-11-27 08:00:32,262 | INFO     | aborting loop
[2025-11-27 03:01:04] 2025-11-27 08:00:32,544 | INFO     | all data control threads have been joined
[2025-11-27 03:01:04] 2025-11-27 08:00:32,732 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:32,877 | INFO     | all payload control threads have been joined
[2025-11-27 03:01:04] 2025-11-27 08:00:33,061 | INFO     | [job] control thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:33,070 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:33,085 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:01:04] 2025-11-27 08:00:33,213 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:33,267 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:33,333 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:33,334 | INFO     | [job] validate thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:33,339 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:33,382 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:33,430 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:33,519 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:33,550 | INFO     | [data] control thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:33,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:01:04] 2025-11-27 08:00:33,883 | INFO     | [payload] control thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:34,584 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:35,092 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:35,736 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:01:04] 2025-11-27 08:00:47,286 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:01:04] 2025-11-27 08:00:47,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196096849728)>', '<ExcThread(monitor, started 140195382949632)>']
[2025-11-27 03:01:04] 2025-11-27 08:00:52,449 | INFO     | all workflow threads have been joined
[2025-11-27 03:01:04] 2025-11-27 08:00:52,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:01:04] 2025-11-27 08:00:52,450 | INFO     | traces error code: 0
[2025-11-27 03:01:04] 2025-11-27 08:00:52,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:01:04] 2025-11-27 08:01:03,061 | INFO     | PID=4193352 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:01:04] 2025-11-27 08:01:03,061 | INFO     | .. there are 66 such processes running
[2025-11-27 03:01:04] 2025-11-27 08:01:03,062 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:01:04] 2025-11-27 08:01:03,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:01:04] 2025-11-27 08:01:03,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:01:04] 2025-11-27 08:01:03,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:01:04] 2025-11-27 08:01:03,062 | INFO     | [monitor] control thread has ended
[2025-11-27 03:01:04] 2025-11-27 08:01:03,291 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:01:04] 2025-11-27 08:01:03,317 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:01:04] 2025-11-27 08:01:03,348 [wrapper] pilotpid: 4193352
[2025-11-27 03:01:04] 2025-11-27 08:01:03,365 [wrapper] Pilot exit status: 0
[2025-11-27 03:01:04] 2025-11-27 08:01:03,446 [wrapper] pandaids: 6896990440
[2025-11-27 03:01:04] 2025-11-27 08:01:03,723 [wrapper] cleanup supervisor_pilot  115423 4193361
[2025-11-27 03:01:04] 2025-11-27 08:01:03,782 [wrapper] Test setup, not cleaning
[2025-11-27 03:01:04] 2025-11-27 08:01:03,797 [wrapper] apfmon messages muted
[2025-11-27 03:01:04] 2025-11-27 08:01:03,804 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:01:04] 2025-11-27 08:01:03,838 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:01:04]  *** Error codes and diagnostics ***
[2025-11-27 03:01:04]     "exeErrorCode": 0,
[2025-11-27 03:01:04]     "exeErrorDiag": "",
[2025-11-27 03:01:04]     "pilotErrorCode": 0,
[2025-11-27 03:01:04]     "pilotErrorDiag": "",
[2025-11-27 03:01:04]  *** Listing of results directory ***
[2025-11-27 03:01:04] total 1323252
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 03:01:04] -rwx------. 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas       100 Nov 26 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:01:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 12:04 run_atlas
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas       105 Nov 26 12:04 job.xml
[2025-11-27 03:01:04] -rw-r--r--. 2 boincer umatlas 410999326 Nov 26 12:04 EVNT.47483658._002175.pool.root.1
[2025-11-27 03:01:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 12:04 start_atlas.sh
[2025-11-27 03:01:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 12:04 shared
[2025-11-27 03:01:04] -rw-r--r--. 2 boincer umatlas    590112 Nov 26 12:04 input.tar.gz
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas         0 Nov 26 12:04 boinc_lockfile
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 12:04 pandaJob.out
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas        57 Nov 26 12:04 setup.sh.local
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas    991545 Nov 26 12:05 agis_schedconf.cvmfs.json
[2025-11-27 03:01:04] drwx------. 5 boincer umatlas      4096 Nov 26 12:05 pilot3
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas       533 Nov 27 02:43 boinc_task_state.xml
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas      6881 Nov 27 02:57 init_data.xml
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas 922808372 Nov 27 02:58 HITS.47556161._001585.pool.root.1
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas      1058 Nov 27 02:59 memory_monitor_summary.json
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:59 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas   2051660 Nov 27 03:00 log.47556161._001585.job.log.tgz.1
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas      8624 Nov 27 03:00 heartbeat.json
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:00 boinc_mmap_file
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:00 wrapper_checkpoint.txt
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas       823 Nov 27 03:01 pilotlog.txt
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas        95 Nov 27 03:01 pilot_heartbeat.json
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas   6589833 Nov 27 03:01 log.47556161._001585.job.log.1
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas       353 Nov 27 03:01 output.list
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:01 runtime_log
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas   8663040 Nov 27 03:01 result.tar.gz
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas       662 Nov 27 03:01 VPIMDmTWBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPTMKDmEaIirm.diag
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas      9353 Nov 27 03:01 runtime_log.err
[2025-11-27 03:01:04] -rw-r--r--. 1 boincer umatlas     21142 Nov 27 03:01 stderr.txt
[2025-11-27 03:01:04] HITS file was successfully produced:
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas 922808372 Nov 27 02:58 shared/HITS.pool.root.1
[2025-11-27 03:01:04]  *** Contents of shared directory: ***
[2025-11-27 03:01:04] total 1311616
[2025-11-27 03:01:04] -rw-r--r--. 2 boincer umatlas 410999326 Nov 26 12:04 ATLAS.root_0
[2025-11-27 03:01:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 12:04 start_atlas.sh
[2025-11-27 03:01:04] -rw-r--r--. 2 boincer umatlas    590112 Nov 26 12:04 input.tar.gz
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas 922808372 Nov 27 02:58 HITS.pool.root.1
[2025-11-27 03:01:04] -rw-------. 1 boincer umatlas   8663040 Nov 27 03:01 result.tar.gz
03:01:06 (4180288): run_atlas exited; CPU time 283972.941424
03:01:06 (4180288): called boinc_finish(0)

</stderr_txt>
]]>

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