Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:47:14 (3569563): wrapper (7.7.26015): starting
10:47:14 (3569563): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 10:47:14] Arguments: --nthreads 9
[2025-11-26 10:47:14] Threads: 9
[2025-11-26 10:47:14] Checking for CVMFS
[2025-11-26 10:47:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:47:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:47:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:47:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:47:15] 2.13.3.0 9955 30204 321072 153326 2 427 18182395 32935937 25855 16776704 0 172652907 99.793 93426728 32976 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 10:47:15] CVMFS is ok
[2025-11-26 10:47:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:47:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:47:15] Further information can be found at the LHC@home message board.
[2025-11-26 10:47:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:47:15] Checking for apptainer binary...
[2025-11-26 10:47:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:47:15] Running /usr/bin/apptainer --version
[2025-11-26 10:47:15] apptainer version 1.4.4-1.el9
[2025-11-26 10:47:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:47:15] c-5-1.aglt2.org
[2025-11-26 10:47:15] apptainer works
[2025-11-26 10:47:15] Set ATHENA_PROC_NUMBER=9
[2025-11-26 10:47:15] Set ATHENA_CORE_NUMBER=9
[2025-11-26 10:47:16] Starting ATLAS job with PandaID=6897394675
[2025-11-26 10:47:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:05:20]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:05:20] 2025-11-27 06:04:37,907 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:05:20] 2025-11-27 06:04:37,908 | INFO     | sum of square deviations: 185102511122.589
[2025-11-27 01:05:20] 2025-11-27 06:04:37,927 | INFO     | sum of deviations: 1430852115466.5178
[2025-11-27 01:05:20] 2025-11-27 06:04:37,928 | INFO     | mean x: 1764197765.743468
[2025-11-27 01:05:20] 2025-11-27 06:04:37,928 | INFO     | mean y: 3106105.0486935866
[2025-11-27 01:05:20] 2025-11-27 06:04:37,928 | INFO     | intersect: -13634235116.884043
[2025-11-27 01:05:20] 2025-11-27 06:04:37,941 | INFO     | chi2: 10.169689222473952
[2025-11-27 01:05:20] 2025-11-27 06:04:37,943 | INFO     | sum of square deviations: 181825062989.77322
[2025-11-27 01:05:20] 2025-11-27 06:04:37,959 | INFO     | sum of deviations: 1740538321067.8284
[2025-11-27 01:05:20] 2025-11-27 06:04:37,959 | INFO     | mean x: 1764197613.2568698
[2025-11-27 01:05:20] 2025-11-27 06:04:37,960 | INFO     | mean y: 3120510.2473118277
[2025-11-27 01:05:20] 2025-11-27 06:04:37,960 | INFO     | intersect: -16884834875.653976
[2025-11-27 01:05:20] 2025-11-27 06:04:37,961 | INFO     | chi2: 6.8174562875199225
[2025-11-27 01:05:20] 2025-11-27 06:04:37,961 | INFO     | current chi2=6.8174562875199225 (change=32.96298305307054 %)
[2025-11-27 01:05:20] 2025-11-27 06:04:37,962 | INFO     | sum of square deviations: 178586545819.15247
[2025-11-27 01:05:20] 2025-11-27 06:04:37,979 | INFO     | sum of deviations: 2044848727694.4185
[2025-11-27 01:05:20] 2025-11-27 06:04:37,980 | INFO     | mean x: 1764197460.7704327
[2025-11-27 01:05:20] 2025-11-27 06:04:37,980 | INFO     | mean y: 3134832.5048076925
[2025-11-27 01:05:20] 2025-11-27 06:04:37,980 | INFO     | intersect: -20197249896.988384
[2025-11-27 01:05:20] 2025-11-27 06:04:37,981 | INFO     | chi2: 3.545024613367909
[2025-11-27 01:05:20] 2025-11-27 06:04:37,982 | INFO     | current chi2=3.545024613367909 (change=48.00077237227831 %)
[2025-11-27 01:05:20] 2025-11-27 06:04:37,983 | INFO     | sum of square deviations: 175386727048.2224
[2025-11-27 01:05:20] 2025-11-27 06:04:37,999 | INFO     | sum of deviations: 2150397839650.082
[2025-11-27 01:05:20] 2025-11-27 06:04:38,000 | INFO     | mean x: 1764197308.2841597
[2025-11-27 01:05:20] 2025-11-27 06:04:38,000 | INFO     | mean y: 3139853.952841596
[2025-11-27 01:05:20] 2025-11-27 06:04:38,000 | INFO     | intersect: -21627494027.524773
[2025-11-27 01:05:20] 2025-11-27 06:04:38,001 | INFO     | chi2: 2.9114451186100343
[2025-11-27 01:05:20] 2025-11-27 06:04:38,001 | INFO     | current chi2=2.9114451186100343 (change=17.872358131695734 %)
[2025-11-27 01:05:20] 2025-11-27 06:04:38,001 | INFO     | right removable region: 826
[2025-11-27 01:05:20] 2025-11-27 06:04:38,002 | INFO     | sum of square deviations: 181823910699.7733
[2025-11-27 01:05:20] 2025-11-27 06:04:38,043 | INFO     | sum of deviations: 1143040705393.4485
[2025-11-27 01:05:20] 2025-11-27 06:04:38,043 | INFO     | mean x: 1764197918.2568698
[2025-11-27 01:05:20] 2025-11-27 06:04:38,044 | INFO     | mean y: 3119482.835125448
[2025-11-27 01:05:20] 2025-11-27 06:04:38,044 | INFO     | intersect: -11087556243.899754
[2025-11-27 01:05:20] 2025-11-27 06:04:38,045 | INFO     | chi2: 7.596938492608052
[2025-11-27 01:05:20] 2025-11-27 06:04:38,045 | INFO     | current chi2=7.596938492608052 (change=25.29822370756807 %)
[2025-11-27 01:05:20] 2025-11-27 06:04:38,046 | INFO     | sum of square deviations: 178584496541.827
[2025-11-27 01:05:20] 2025-11-27 06:04:38,062 | INFO     | sum of deviations: 1076736576030.5039
[2025-11-27 01:05:20] 2025-11-27 06:04:38,062 | INFO     | mean x: 1764198070.7644231
[2025-11-27 01:05:20] 2025-11-27 06:04:38,062 | INFO     | mean y: 3122603.3954326925
[2025-11-27 01:05:20] 2025-11-27 06:04:38,063 | INFO     | intersect: -10633727890.004469
[2025-11-27 01:05:20] 2025-11-27 06:04:38,064 | INFO     | chi2: 7.540934621568372
[2025-11-27 01:05:20] 2025-11-27 06:04:38,064 | INFO     | current chi2=7.540934621568372 (change=0.7371900021853891 %)
[2025-11-27 01:05:20] 2025-11-27 06:04:38,064 | INFO     | left removable region: 20
[2025-11-27 01:05:20] 2025-11-27 06:04:38,065 | INFO     | sum of square deviations: 162360920253.55362
[2025-11-27 01:05:20] 2025-11-27 06:04:38,081 | INFO     | sum of deviations: 1706576077133.0098
[2025-11-27 01:05:20] 2025-11-27 06:04:38,081 | INFO     | mean x: 1764197887.8188586
[2025-11-27 01:05:20] 2025-11-27 06:04:38,081 | INFO     | mean y: 3161019.4863523575
[2025-11-27 01:05:20] 2025-11-27 06:04:38,081 | INFO     | intersect: -18540327807.6186
[2025-11-27 01:05:20] 2025-11-27 06:04:38,082 | INFO     | chi2: 0.22047111501325672
[2025-11-27 01:05:20] 2025-11-27 06:04:38,083 | INFO     | current memory leak: 10.51 B/s (using 806 data points, chi2=0.22)
[2025-11-27 01:05:20] 2025-11-27 06:04:38,084 | INFO     | could have reported an average CPU frequency of 2600 MHz (31 samples)
[2025-11-27 01:05:20] 2025-11-27 06:04:38,084 | INFO     | ..............................
[2025-11-27 01:05:20] 2025-11-27 06:04:38,084 | INFO     | . Timing measurements:
[2025-11-27 01:05:20] 2025-11-27 06:04:38,084 | INFO     | . get job = 0 s
[2025-11-27 01:05:20] 2025-11-27 06:04:38,084 | INFO     | . initial setup = 3 s
[2025-11-27 01:05:20] 2025-11-27 06:04:38,084 | INFO     | . payload setup = 14 s
[2025-11-27 01:05:20] 2025-11-27 06:04:38,084 | INFO     | . stage-in = 0 s
[2025-11-27 01:05:20] 2025-11-27 06:04:38,084 | INFO     | . payload execution = 51349 s
[2025-11-27 01:05:20] 2025-11-27 06:04:38,084 | INFO     | . stage-out = 4 s
[2025-11-27 01:05:20] 2025-11-27 06:04:38,085 | INFO     | . log creation = 1 s
[2025-11-27 01:05:20] 2025-11-27 06:04:38,085 | INFO     | ..............................
[2025-11-27 01:05:20] 2025-11-27 06:04:38,192 | INFO     | 
[2025-11-27 01:05:20] 2025-11-27 06:04:38,192 | INFO     | job summary report
[2025-11-27 01:05:20] 2025-11-27 06:04:38,192 | INFO     | --------------------------------------------------
[2025-11-27 01:05:20] 2025-11-27 06:04:38,192 | INFO     | PanDA job id: 6897394675
[2025-11-27 01:05:20] 2025-11-27 06:04:38,192 | INFO     | task id: 47556173
[2025-11-27 01:05:20] 2025-11-27 06:04:38,192 | INFO     | errors: (none)
[2025-11-27 01:05:20] 2025-11-27 06:04:38,193 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:05:20] 2025-11-27 06:04:38,193 | INFO     | pilot state: finished 
[2025-11-27 01:05:20] 2025-11-27 06:04:38,193 | INFO     | transexitcode: 0
[2025-11-27 01:05:20] 2025-11-27 06:04:38,193 | INFO     | exeerrorcode: 0
[2025-11-27 01:05:20] 2025-11-27 06:04:38,193 | INFO     | exeerrordiag: 
[2025-11-27 01:05:20] 2025-11-27 06:04:38,193 | INFO     | exitcode: 0
[2025-11-27 01:05:20] 2025-11-27 06:04:38,193 | INFO     | exitmsg: OK
[2025-11-27 01:05:20] 2025-11-27 06:04:38,193 | INFO     | cpuconsumptiontime: 300334 s
[2025-11-27 01:05:20] 2025-11-27 06:04:38,193 | INFO     | nevents: 1000
[2025-11-27 01:05:20] 2025-11-27 06:04:38,194 | INFO     | neventsw: 0
[2025-11-27 01:05:20] 2025-11-27 06:04:38,194 | INFO     | pid: 3583876
[2025-11-27 01:05:20] 2025-11-27 06:04:38,194 | INFO     | pgrp: 3583876
[2025-11-27 01:05:20] 2025-11-27 06:04:38,194 | INFO     | corecount: 9
[2025-11-27 01:05:20] 2025-11-27 06:04:38,194 | INFO     | event service: False
[2025-11-27 01:05:20] 2025-11-27 06:04:38,194 | INFO     | sizes: {0: 2284092, 1: 2284291, 11: 2284553, 12: 2284581, 51367: 2333812, 51368: 2333811, 51373: 2342989, 51376: 2343045, 51393: 2343291}
[2025-11-27 01:05:20] 2025-11-27 06:04:38,194 | INFO     | --------------------------------------------------
[2025-11-27 01:05:20] 2025-11-27 06:04:38,194 | INFO     | 
[2025-11-27 01:05:20] 2025-11-27 06:04:38,194 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 01:05:20] 2025-11-27 06:04:38,217 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,218 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,218 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,218 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,220 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:05:20] 2025-11-27 06:04:38,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,220 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:05:20] 2025-11-27 06:04:38,220 | INFO     | job 6897394675 has completed (purged errors)
[2025-11-27 01:05:20] 2025-11-27 06:04:38,220 | INFO     | overall cleanup function is called
[2025-11-27 01:05:20] 2025-11-27 06:04:39,238 | INFO     | --- collectZombieJob: --- 10, [3583876]
[2025-11-27 01:05:20] 2025-11-27 06:04:39,238 | INFO     | zombie collector waiting for pid 3583876
[2025-11-27 01:05:20] 2025-11-27 06:04:39,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:05:20] 2025-11-27 06:04:39,238 | INFO     | collected zombie processes
[2025-11-27 01:05:20] 2025-11-27 06:04:39,238 | INFO     | will attempt to kill all subprocesses of pid=3583876
[2025-11-27 01:05:20] 2025-11-27 06:04:40,158 | INFO     | process IDs to be killed: [3583876] (in reverse order)
[2025-11-27 01:05:20] 2025-11-27 06:04:40,377 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:05:20] 2025-11-27 06:04:40,377 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:05:20] 2025-11-27 06:04:40,527 | INFO     | did not find any defunct processes belonging to 3583876
[2025-11-27 01:05:20] 2025-11-27 06:04:40,545 | INFO     | did not find any defunct processes belonging to 3583876
[2025-11-27 01:05:20] 2025-11-27 06:04:40,546 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:05:20] 2025-11-27 06:04:40,546 | INFO     | ready for new job
[2025-11-27 01:05:20] 2025-11-27 06:04:40,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:05:20] 2025-11-27 06:04:40,550 | INFO     | ***************************************
[2025-11-27 01:05:20] 2025-11-27 06:04:40,551 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:05:20] 2025-11-27 06:04:40,551 | INFO     | ***************************************
[2025-11-27 01:05:20] 2025-11-27 06:04:40,551 | INFO     | 
[2025-11-27 01:05:20] 2025-11-27 06:04:40,553 | INFO     | architecture information:
[2025-11-27 01:05:20] 2025-11-27 06:04:40,554 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:05:20] 2025-11-27 06:04:40,592 | INFO     | cat /etc/os-release:
[2025-11-27 01:05:20] NAME="CentOS Linux"
[2025-11-27 01:05:20] VERSION="7 (Core)"
[2025-11-27 01:05:20] ID="centos"
[2025-11-27 01:05:20] ID_LIKE="rhel fedora"
[2025-11-27 01:05:20] VERSION_ID="7"
[2025-11-27 01:05:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:05:20] ANSI_COLOR="0;31"
[2025-11-27 01:05:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:05:20] HOME_URL="https://www.centos.org/"
[2025-11-27 01:05:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:05:20] 
[2025-11-27 01:05:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:05:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:05:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:05:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:05:20] 
[2025-11-27 01:05:20] 2025-11-27 06:04:40,592 | INFO     | ***************************************
[2025-11-27 01:05:20] 2025-11-27 06:04:41,096 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 01:05:20] 2025-11-27 06:04:41,214 | INFO     | sufficient remaining disk space (70689751040 B)
[2025-11-27 01:05:20] 2025-11-27 06:04:41,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:05:20] 2025-11-27 06:04:41,215 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:05:20] 2025-11-27 06:04:41,215 | INFO     | update_server=False
[2025-11-27 01:05:20] 2025-11-27 06:04:41,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:05:20] 2025-11-27 06:04:41,236 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:05:20] 2025-11-27 06:04:41,341 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 01:05:20] 2025-11-27 06:04:41,341 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 01:05:20] 2025-11-27 06:04:41,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:05:20] 2025-11-27 06:04:41,341 | INFO     | will abort loop
[2025-11-27 01:05:20] 2025-11-27 06:04:41,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:05:20] 2025-11-27 06:04:41,690 | INFO     | all data control threads have been joined
[2025-11-27 01:05:20] 2025-11-27 06:04:41,790 | INFO     | all payload control threads have been joined
[2025-11-27 01:05:20] 2025-11-27 06:04:42,221 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:42,280 | INFO     | all job control threads have been joined
[2025-11-27 01:05:20] 2025-11-27 06:04:42,347 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:42,402 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:42,544 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:42,656 | INFO     | [job] validate thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:42,695 | INFO     | [data] control thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:42,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:42,798 | INFO     | [payload] control thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:42,898 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:43,066 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:43,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:05:20] 2025-11-27 06:04:43,286 | INFO     | [job] control thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:43,454 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:43,639 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:43,764 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:44,229 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:04:45,246 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:05:20] 2025-11-27 06:05:10,788 | INFO     | PID=3576030 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 01:05:20] 2025-11-27 06:05:10,789 | INFO     | .. there are 41 such processes running
[2025-11-27 01:05:20] 2025-11-27 06:05:10,790 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:05:20] 2025-11-27 06:05:10,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:05:20] 2025-11-27 06:05:10,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:05:20] 2025-11-27 06:05:14,307 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:05:20] 2025-11-27 06:05:14,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712977082176)>', '<ExcThread(monitor, started 140712632895232)>']
[2025-11-27 01:05:20] 2025-11-27 06:05:14,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:05:20] 2025-11-27 06:05:14,813 | INFO     | [monitor] control thread has ended
[2025-11-27 01:05:20] 2025-11-27 06:05:19,576 | INFO     | all workflow threads have been joined
[2025-11-27 01:05:20] 2025-11-27 06:05:19,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:05:20] 2025-11-27 06:05:19,581 | INFO     | traces error code: 0
[2025-11-27 01:05:20] 2025-11-27 06:05:19,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:05:20] 2025-11-27 06:05:19,769 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:05:20] 2025-11-27 06:05:19,773 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:05:20] 2025-11-27 06:05:19,780 [wrapper] pilotpid: 3576030
[2025-11-27 01:05:20] 2025-11-27 06:05:19,786 [wrapper] Pilot exit status: 0
[2025-11-27 01:05:20] 2025-11-27 06:05:19,832 [wrapper] pandaids: 6897394675
[2025-11-27 01:05:20] 2025-11-27 06:05:19,917 [wrapper] cleanup supervisor_pilot 3132930 3576031
[2025-11-27 01:05:20] 2025-11-27 06:05:19,951 [wrapper] Test setup, not cleaning
[2025-11-27 01:05:20] 2025-11-27 06:05:19,954 [wrapper] apfmon messages muted
[2025-11-27 01:05:20] 2025-11-27 06:05:19,957 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:05:20] 2025-11-27 06:05:19,960 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:05:20]  *** Error codes and diagnostics ***
[2025-11-27 01:05:20]     "exeErrorCode": 0,
[2025-11-27 01:05:20]     "exeErrorDiag": "",
[2025-11-27 01:05:20]     "pilotErrorCode": 0,
[2025-11-27 01:05:20]     "pilotErrorDiag": "",
[2025-11-27 01:05:20]  *** Listing of results directory ***
[2025-11-27 01:05:20] total 1324536
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 01:05:20] -rwx------. 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas       100 Nov 26 10:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:05:20] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 10:47 run_atlas
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas       105 Nov 26 10:47 job.xml
[2025-11-27 01:05:20] -rw-r--r--. 2 boincer umatlas 410347747 Nov 26 10:47 EVNT.47483658._003103.pool.root.1
[2025-11-27 01:05:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:47 start_atlas.sh
[2025-11-27 01:05:20] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 10:47 shared
[2025-11-27 01:05:20] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 10:47 input.tar.gz
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas         0 Nov 26 10:47 boinc_lockfile
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 10:47 pandaJob.out
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas        57 Nov 26 10:47 setup.sh.local
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas    991855 Nov 26 10:47 agis_schedconf.cvmfs.json
[2025-11-27 01:05:20] drwx------. 5 boincer umatlas      4096 Nov 26 10:47 pilot3
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas       533 Nov 27 00:49 boinc_task_state.xml
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas 924358033 Nov 27 01:03 HITS.47556173._000814.pool.root.1
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas      1059 Nov 27 01:04 memory_monitor_summary.json
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas   1516240 Nov 27 01:04 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas   2141387 Nov 27 01:04 log.47556173._000814.job.log.tgz.1
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas      6660 Nov 27 01:04 init_data.xml
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas      8617 Nov 27 01:04 heartbeat.json
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas        95 Nov 27 01:05 pilot_heartbeat.json
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas        29 Nov 27 01:05 wrapper_checkpoint.txt
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas      5010 Nov 27 01:05 pilotlog.txt
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas   6706880 Nov 27 01:05 log.47556173._000814.job.log.1
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 01:05 boinc_mmap_file
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas       353 Nov 27 01:05 output.list
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas       620 Nov 27 01:05 runtime_log
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas   8867840 Nov 27 01:05 result.tar.gz
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas       657 Nov 27 01:05 rYRMDm1VBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHWJKDmyGzvvn.diag
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas      9328 Nov 27 01:05 runtime_log.err
[2025-11-27 01:05:20] -rw-r--r--. 1 boincer umatlas     21176 Nov 27 01:05 stderr.txt
[2025-11-27 01:05:20] HITS file was successfully produced:
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas 924358033 Nov 27 01:03 shared/HITS.pool.root.1
[2025-11-27 01:05:20]  *** Contents of shared directory: ***
[2025-11-27 01:05:20] total 1312692
[2025-11-27 01:05:20] -rw-r--r--. 2 boincer umatlas 410347747 Nov 26 10:47 ATLAS.root_0
[2025-11-27 01:05:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:47 start_atlas.sh
[2025-11-27 01:05:20] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 10:47 input.tar.gz
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas 924358033 Nov 27 01:03 HITS.pool.root.1
[2025-11-27 01:05:20] -rw-------. 1 boincer umatlas   8867840 Nov 27 01:05 result.tar.gz
01:05:22 (3569563): run_atlas exited; CPU time 301973.894436
01:05:22 (3569563): called boinc_finish(0)

</stderr_txt>
]]>

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