Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:14:45 (2026795): wrapper (7.7.26015): starting
11:14:45 (2026795): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 11:14:45] Arguments: --nthreads 8
[2025-11-26 11:14:45] Threads: 8
[2025-11-26 11:14:45] Checking for CVMFS
[2025-11-26 11:14:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:14:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:14:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:14:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:14:46] 2.10.1.0 4440 252097 172456 153326 0 81 10331924 18432000 3769 130560 2 280338742 99.988 10196887 6502 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-26 11:14:46] CVMFS is ok
[2025-11-26 11:14:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:14:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:14:46] Further information can be found at the LHC@home message board.
[2025-11-26 11:14:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:14:46] Checking for apptainer binary...
[2025-11-26 11:14:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:14:46] Running /usr/bin/apptainer --version
[2025-11-26 11:14:46] apptainer version 1.1.9-1.el8
[2025-11-26 11:14:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:14:46] c-16-31.aglt2.org
[2025-11-26 11:14:46] apptainer works
[2025-11-26 11:14:46] Set ATHENA_PROC_NUMBER=8
[2025-11-26 11:14:46] Set ATHENA_CORE_NUMBER=8
[2025-11-26 11:14:46] Starting ATLAS job with PandaID=6897139735
[2025-11-26 11:14:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:21:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:21:48] 2025-11-27 09:20:59,168 | INFO     | job 6897139735 has state=finished
[2025-11-27 04:21:48] 2025-11-27 09:20:59,169 | INFO     | preparing for final server update for job 6897139735 in state='finished'
[2025-11-27 04:21:48] 2025-11-27 09:20:59,169 | INFO     | this job has now completed (state=finished)
[2025-11-27 04:21:48] 2025-11-27 09:20:59,169 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-27 04:21:48] 2025-11-27 09:20:59,170 | INFO     | log transfer has been attempted: DONE
[2025-11-27 04:21:48] 2025-11-27 09:20:59,170 | INFO     | job 6897139735 has finished - writing final server update
[2025-11-27 04:21:48] 2025-11-27 09:20:59,170 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 04:21:48] 2025-11-27 09:20:59,171 | INFO     | executing command: lscpu
[2025-11-27 04:21:48] 2025-11-27 09:20:59,234 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 04:21:48] 2025-11-27 09:20:59,930 | INFO     | monitor loop #4392: job 0:6897139735 is in state 'finished'
[2025-11-27 04:21:48] 2025-11-27 09:20:59,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:21:48] 2025-11-27 09:21:00,265 | INFO     | PID=2033906 has CPU usage=19.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 04:21:48] 2025-11-27 09:21:00,265 | INFO     | .. there are 5 such processes running
[2025-11-27 04:21:48] 2025-11-27 09:21:01,267 | INFO     | time since job start (61564s) is within the limit (172800.0s)
[2025-11-27 04:21:48] 2025-11-27 09:21:02,433 | INFO     | monitor loop #4393: job 0:6897139735 is in state 'finished'
[2025-11-27 04:21:48] 2025-11-27 09:21:02,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:21:48] 2025-11-27 09:21:03,272 | INFO     | time since job start (61566s) is within the limit (172800.0s)
[2025-11-27 04:21:48] 2025-11-27 09:21:04,518 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 04:21:48] 2025-11-27 09:21:04,524 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2969.8656499999997
[2025-11-27 04:21:48] 2025-11-27 09:21:04,528 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897139735/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:21:48] 2025-11-27 09:21:04,529 | INFO     | extracted standard info from prmon json
[2025-11-27 04:21:48] 2025-11-27 09:21:04,529 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:21:48] 2025-11-27 09:21:04,529 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:21:48] 2025-11-27 09:21:04,540 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:21:48] 2025-11-27 09:21:04,541 | INFO     | sum of square deviations: 318530246558.4133
[2025-11-27 04:21:48] 2025-11-27 09:21:04,557 | INFO     | sum of deviations: 11110475512542.758
[2025-11-27 04:21:48] 2025-11-27 09:21:04,558 | INFO     | mean x: 1764204467.0396433
[2025-11-27 04:21:48] 2025-11-27 09:21:04,558 | INFO     | mean y: 3283441.35579782
[2025-11-27 04:21:48] 2025-11-27 09:21:04,558 | INFO     | intersect: -61532946608.83495
[2025-11-27 04:21:48] 2025-11-27 09:21:04,559 | INFO     | chi2: 25.81944507546747
[2025-11-27 04:21:48] 2025-11-27 09:21:04,559 | INFO     | sum of square deviations: 313818337853.4168
[2025-11-27 04:21:48] 2025-11-27 09:21:04,575 | INFO     | sum of deviations: 11472904494289.576
[2025-11-27 04:21:48] 2025-11-27 09:21:04,575 | INFO     | mean x: 1764204314.5398407
[2025-11-27 04:21:48] 2025-11-27 09:21:04,575 | INFO     | mean y: 3295168.360557769
[2025-11-27 04:21:48] 2025-11-27 09:21:04,576 | INFO     | intersect: -64494362131.01457
[2025-11-27 04:21:48] 2025-11-27 09:21:04,576 | INFO     | chi2: 22.888668184515538
[2025-11-27 04:21:48] 2025-11-27 09:21:04,576 | INFO     | current chi2=22.888668184515538 (change=11.351045238910386 %)
[2025-11-27 04:21:48] 2025-11-27 09:21:04,576 | INFO     | right removable region: 1003
[2025-11-27 04:21:48] 2025-11-27 09:21:04,577 | INFO     | sum of square deviations: 313818313453.4168
[2025-11-27 04:21:48] 2025-11-27 09:21:04,593 | INFO     | sum of deviations: 10776893282914.94
[2025-11-27 04:21:48] 2025-11-27 09:21:04,593 | INFO     | mean x: 1764204619.5398407
[2025-11-27 04:21:48] 2025-11-27 09:21:04,593 | INFO     | mean y: 3294226.826693227
[2025-11-27 04:21:48] 2025-11-27 09:21:04,593 | INFO     | intersect: -60581585937.691345
[2025-11-27 04:21:48] 2025-11-27 09:21:04,594 | INFO     | chi2: 23.692346209674547
[2025-11-27 04:21:48] 2025-11-27 09:21:04,594 | INFO     | current chi2=23.692346209674547 (change=8.238360118025936 %)
[2025-11-27 04:21:48] 2025-11-27 09:21:04,594 | INFO     | left removable region: 10
[2025-11-27 04:21:48] 2025-11-27 09:21:04,595 | INFO     | sum of square deviations: 303616141350.3885
[2025-11-27 04:21:48] 2025-11-27 09:21:04,611 | INFO     | sum of deviations: 10986077567010.332
[2025-11-27 04:21:48] 2025-11-27 09:21:04,611 | INFO     | mean x: 1764204589.040282
[2025-11-27 04:21:48] 2025-11-27 09:21:04,611 | INFO     | mean y: 3310616.0916414903
[2025-11-27 04:21:48] 2025-11-27 09:21:04,611 | INFO     | intersect: -63832848993.43541
[2025-11-27 04:21:48] 2025-11-27 09:21:04,612 | INFO     | chi2: 20.71780971692377
[2025-11-27 04:21:48] 2025-11-27 09:21:04,612 | INFO     | current memory leak: 36.18 B/s (using 993 data points, chi2=20.72)
[2025-11-27 04:21:48] 2025-11-27 09:21:04,612 | INFO     | could have reported an average CPU frequency of 2911 MHz (37 samples)
[2025-11-27 04:21:48] 2025-11-27 09:21:04,613 | INFO     | ..............................
[2025-11-27 04:21:48] 2025-11-27 09:21:04,613 | INFO     | . Timing measurements:
[2025-11-27 04:21:48] 2025-11-27 09:21:04,613 | INFO     | . get job = 0 s
[2025-11-27 04:21:48] 2025-11-27 09:21:04,613 | INFO     | . initial setup = 2 s
[2025-11-27 04:21:48] 2025-11-27 09:21:04,613 | INFO     | . payload setup = 5 s
[2025-11-27 04:21:48] 2025-11-27 09:21:04,613 | INFO     | . stage-in = 0 s
[2025-11-27 04:21:48] 2025-11-27 09:21:04,613 | INFO     | . payload execution = 61528 s
[2025-11-27 04:21:48] 2025-11-27 09:21:04,613 | INFO     | . stage-out = 3 s
[2025-11-27 04:21:48] 2025-11-27 09:21:04,613 | INFO     | . log creation = 0 s
[2025-11-27 04:21:48] 2025-11-27 09:21:04,613 | INFO     | ..............................
[2025-11-27 04:21:48] 2025-11-27 09:21:04,676 | INFO     | 
[2025-11-27 04:21:48] 2025-11-27 09:21:04,677 | INFO     | job summary report
[2025-11-27 04:21:48] 2025-11-27 09:21:04,677 | INFO     | --------------------------------------------------
[2025-11-27 04:21:48] 2025-11-27 09:21:04,677 | INFO     | PanDA job id: 6897139735
[2025-11-27 04:21:48] 2025-11-27 09:21:04,677 | INFO     | task id: 47556161
[2025-11-27 04:21:48] 2025-11-27 09:21:04,677 | INFO     | errors: (none)
[2025-11-27 04:21:48] 2025-11-27 09:21:04,677 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:21:48] 2025-11-27 09:21:04,678 | INFO     | pilot state: finished 
[2025-11-27 04:21:48] 2025-11-27 09:21:04,678 | INFO     | transexitcode: 0
[2025-11-27 04:21:48] 2025-11-27 09:21:04,678 | INFO     | exeerrorcode: 0
[2025-11-27 04:21:48] 2025-11-27 09:21:04,678 | INFO     | exeerrordiag: 
[2025-11-27 04:21:48] 2025-11-27 09:21:04,678 | INFO     | exitcode: 0
[2025-11-27 04:21:48] 2025-11-27 09:21:04,678 | INFO     | exitmsg: OK
[2025-11-27 04:21:48] 2025-11-27 09:21:04,679 | INFO     | cpuconsumptiontime: 482357 s
[2025-11-27 04:21:48] 2025-11-27 09:21:04,679 | INFO     | nevents: 1000
[2025-11-27 04:21:48] 2025-11-27 09:21:04,679 | INFO     | neventsw: 0
[2025-11-27 04:21:48] 2025-11-27 09:21:04,679 | INFO     | pid: 2050907
[2025-11-27 04:21:48] 2025-11-27 09:21:04,679 | INFO     | pgrp: 2050907
[2025-11-27 04:21:48] 2025-11-27 09:21:04,679 | INFO     | corecount: 8
[2025-11-27 04:21:48] 2025-11-27 09:21:04,679 | INFO     | event service: False
[2025-11-27 04:21:48] 2025-11-27 09:21:04,680 | INFO     | sizes: {0: 2284265, 4: 2284527, 11: 2284555, 61538: 2337297, 61542: 2346291, 61545: 2346347, 61552: 2346721}
[2025-11-27 04:21:48] 2025-11-27 09:21:04,680 | INFO     | --------------------------------------------------
[2025-11-27 04:21:48] 2025-11-27 09:21:04,680 | INFO     | 
[2025-11-27 04:21:48] 2025-11-27 09:21:04,680 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 04:21:48] 2025-11-27 09:21:04,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,695 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,695 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,695 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,695 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,695 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,695 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:21:48] 2025-11-27 09:21:04,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:21:48] 2025-11-27 09:21:04,698 | INFO     | job 6897139735 has completed (purged errors)
[2025-11-27 04:21:48] 2025-11-27 09:21:04,698 | INFO     | overall cleanup function is called
[2025-11-27 04:21:48] 2025-11-27 09:21:05,716 | INFO     | --- collectZombieJob: --- 10, [2050907]
[2025-11-27 04:21:48] 2025-11-27 09:21:05,716 | INFO     | zombie collector waiting for pid 2050907
[2025-11-27 04:21:48] 2025-11-27 09:21:05,716 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:21:48] 2025-11-27 09:21:05,716 | INFO     | collected zombie processes
[2025-11-27 04:21:48] 2025-11-27 09:21:05,717 | INFO     | will attempt to kill all subprocesses of pid=2050907
[2025-11-27 04:21:48] 2025-11-27 09:21:06,037 | INFO     | process IDs to be killed: [2050907] (in reverse order)
[2025-11-27 04:21:48] 2025-11-27 09:21:06,126 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:21:48] 2025-11-27 09:21:06,126 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:21:48] 2025-11-27 09:21:06,137 | INFO     | did not find any defunct processes belonging to 2050907
[2025-11-27 04:21:48] 2025-11-27 09:21:06,144 | INFO     | did not find any defunct processes belonging to 2050907
[2025-11-27 04:21:48] 2025-11-27 09:21:06,145 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:21:48] 2025-11-27 09:21:06,145 | INFO     | ready for new job
[2025-11-27 04:21:48] 2025-11-27 09:21:06,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:21:48] 2025-11-27 09:21:06,149 | INFO     | ***************************************
[2025-11-27 04:21:48] 2025-11-27 09:21:06,149 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:21:48] 2025-11-27 09:21:06,149 | INFO     | ***************************************
[2025-11-27 04:21:48] 2025-11-27 09:21:06,149 | INFO     | 
[2025-11-27 04:21:48] 2025-11-27 09:21:06,162 | INFO     | architecture information:
[2025-11-27 04:21:48] 2025-11-27 09:21:06,162 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:21:48] 2025-11-27 09:21:06,171 | INFO     | cat /etc/os-release:
[2025-11-27 04:21:48] NAME="CentOS Linux"
[2025-11-27 04:21:48] VERSION="7 (Core)"
[2025-11-27 04:21:48] ID="centos"
[2025-11-27 04:21:48] ID_LIKE="rhel fedora"
[2025-11-27 04:21:48] VERSION_ID="7"
[2025-11-27 04:21:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:21:48] ANSI_COLOR="0;31"
[2025-11-27 04:21:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:21:48] HOME_URL="https://www.centos.org/"
[2025-11-27 04:21:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:21:48] 
[2025-11-27 04:21:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:21:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:21:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:21:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:21:48] 
[2025-11-27 04:21:48] 2025-11-27 09:21:06,171 | INFO     | ***************************************
[2025-11-27 04:21:48] 2025-11-27 09:21:06,674 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 04:21:48] 2025-11-27 09:21:06,688 | INFO     | sufficient remaining disk space (99611574272 B)
[2025-11-27 04:21:48] 2025-11-27 09:21:06,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:21:48] 2025-11-27 09:21:06,688 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:21:48] 2025-11-27 09:21:06,689 | INFO     | update_server=False
[2025-11-27 04:21:48] 2025-11-27 09:21:06,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:21:48] 2025-11-27 09:21:06,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:21:48] 2025-11-27 09:21:06,689 | INFO     | aborting loop
[2025-11-27 04:21:48] 2025-11-27 09:21:07,567 | INFO     | all job control threads have been joined
[2025-11-27 04:21:48] 2025-11-27 09:21:07,678 | INFO     | all payload control threads have been joined
[2025-11-27 04:21:48] 2025-11-27 09:21:07,692 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:07,695 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:07,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:21:48] 2025-11-27 09:21:07,772 | INFO     | all data control threads have been joined
[2025-11-27 04:21:48] 2025-11-27 09:21:07,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:21:48] 2025-11-27 09:21:07,861 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:07,866 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:07,930 | INFO     | [job] validate thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:08,186 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:08,509 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:08,573 | INFO     | [job] control thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:08,681 | INFO     | [payload] control thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:08,687 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:08,701 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:08,774 | INFO     | [data] control thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:08,927 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:09,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:21:48] 2025-11-27 09:21:09,728 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:10,692 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:11,843 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:21:48] 2025-11-27 09:21:36,739 | INFO     | PID=2033906 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:21:48] 2025-11-27 09:21:36,739 | INFO     | .. there are 5 such processes running
[2025-11-27 04:21:48] 2025-11-27 09:21:36,740 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:21:48] 2025-11-27 09:21:36,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:21:48] 2025-11-27 09:21:36,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:21:48] 2025-11-27 09:21:41,760 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:21:48] 2025-11-27 09:21:43,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140486304081728)>', '<ExcThread(monitor, started 140485872043776)>']
[2025-11-27 04:21:48] 2025-11-27 09:21:43,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:21:48] 2025-11-27 09:21:43,766 | INFO     | [monitor] control thread has ended
[2025-11-27 04:21:48] 2025-11-27 09:21:48,036 | INFO     | all workflow threads have been joined
[2025-11-27 04:21:48] 2025-11-27 09:21:48,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:21:48] 2025-11-27 09:21:48,036 | INFO     | traces error code: 0
[2025-11-27 04:21:48] 2025-11-27 09:21:48,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:21:48] 2025-11-27 09:21:48,144 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:21:48] 2025-11-27 09:21:48,146 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:21:48] 2025-11-27 09:21:48,148 [wrapper] pilotpid: 2033906
[2025-11-27 04:21:48] 2025-11-27 09:21:48,150 [wrapper] Pilot exit status: 0
[2025-11-27 04:21:48] 2025-11-27 09:21:48,170 [wrapper] pandaids: 6897139735
[2025-11-27 04:21:48] 2025-11-27 09:21:48,229 [wrapper] cleanup supervisor_pilot 2345801 2033907
[2025-11-27 04:21:48] 2025-11-27 09:21:48,231 [wrapper] Test setup, not cleaning
[2025-11-27 04:21:48] 2025-11-27 09:21:48,233 [wrapper] apfmon messages muted
[2025-11-27 04:21:48] 2025-11-27 09:21:48,236 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:21:48] 2025-11-27 09:21:48,238 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:21:48]  *** Error codes and diagnostics ***
[2025-11-27 04:21:48]     "exeErrorCode": 0,
[2025-11-27 04:21:48]     "exeErrorDiag": "",
[2025-11-27 04:21:48]     "pilotErrorCode": 0,
[2025-11-27 04:21:48]     "pilotErrorDiag": "",
[2025-11-27 04:21:48]  *** Listing of results directory ***
[2025-11-27 04:21:48] total 1321832
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 04:21:48] -rwx------ 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas       100 Nov 26 11:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:21:48] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 11:14 run_atlas
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas       105 Nov 26 11:14 job.xml
[2025-11-27 04:21:48] -rw-r--r-- 2 boincer umatlas 410790302 Nov 26 11:14 EVNT.47483658._002198.pool.root.1
[2025-11-27 04:21:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 11:14 start_atlas.sh
[2025-11-27 04:21:48] drwxrwx--x 2 boincer umatlas      4096 Nov 26 11:14 shared
[2025-11-27 04:21:48] -rw-r--r-- 2 boincer umatlas    590114 Nov 26 11:14 input.tar.gz
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas         0 Nov 26 11:14 boinc_lockfile
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 11:14 pandaJob.out
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas        57 Nov 26 11:14 setup.sh.local
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas    991855 Nov 26 11:14 agis_schedconf.cvmfs.json
[2025-11-27 04:21:48] drwx------ 5 boincer umatlas      4096 Nov 26 11:14 pilot3
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas       532 Nov 27 04:10 boinc_task_state.xml
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas 917334276 Nov 27 04:20 HITS.47556161._001815.pool.root.1
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas      1065 Nov 27 04:20 memory_monitor_summary.json
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas   1516240 Nov 27 04:20 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas   2215131 Nov 27 04:20 log.47556161._001815.job.log.tgz.1
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas        95 Nov 27 04:21 pilot_heartbeat.json
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas      8658 Nov 27 04:21 heartbeat.json
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas      6014 Nov 27 04:21 init_data.xml
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas      4823 Nov 27 04:21 pilotlog.txt
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas   8541673 Nov 27 04:21 log.47556161._001815.job.log.1
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas       353 Nov 27 04:21 output.list
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 04:21 boinc_mmap_file
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas       620 Nov 27 04:21 runtime_log
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas  10772480 Nov 27 04:21 result.tar.gz
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas      9338 Nov 27 04:21 runtime_log.err
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas       665 Nov 27 04:21 Q6OODmbWBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTYJKDm4dl2Ro.diag
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas        29 Nov 27 04:21 wrapper_checkpoint.txt
[2025-11-27 04:21:48] -rw-r--r-- 1 boincer umatlas     21785 Nov 27 04:21 stderr.txt
[2025-11-27 04:21:48] HITS file was successfully produced:
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas 917334276 Nov 27 04:20 shared/HITS.pool.root.1
[2025-11-27 04:21:48]  *** Contents of shared directory: ***
[2025-11-27 04:21:48] total 1308124
[2025-11-27 04:21:48] -rw-r--r-- 2 boincer umatlas 410790302 Nov 26 11:14 ATLAS.root_0
[2025-11-27 04:21:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 11:14 start_atlas.sh
[2025-11-27 04:21:48] -rw-r--r-- 2 boincer umatlas    590114 Nov 26 11:14 input.tar.gz
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas 917334276 Nov 27 04:20 HITS.pool.root.1
[2025-11-27 04:21:48] -rw------- 1 boincer umatlas  10772480 Nov 27 04:21 result.tar.gz
04:21:50 (2026795): run_atlas exited; CPU time 484021.037774
04:21:50 (2026795): called boinc_finish(0)

</stderr_txt>
]]>

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