Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:00:44 (4121): wrapper (7.7.26015): starting
11:00:44 (4121): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 11:00:44] Arguments: --nthreads 12
[2025-11-26 11:00:44] Threads: 12
[2025-11-26 11:00:44] Checking for CVMFS
[2025-11-26 11:00:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:00:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:00:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:00:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:00:44] 2.11.2.0 3081 287847 98296 153326 3 82 19245792 20275201 1 130560 1 129710715 99.965 16871719 14361 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 11:00:44] CVMFS is ok
[2025-11-26 11:00:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:00:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:00:44] Further information can be found at the LHC@home message board.
[2025-11-26 11:00:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:00:44] Checking for apptainer binary...
[2025-11-26 11:00:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:00:44] Running /usr/bin/apptainer --version
[2025-11-26 11:00:44] apptainer version 1.3.2-1.el7
[2025-11-26 11:00:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:00:46] c-205-29.aglt2.org
[2025-11-26 11:00:46] apptainer works
[2025-11-26 11:00:46] Set ATHENA_PROC_NUMBER=12
[2025-11-26 11:00:46] Set ATHENA_CORE_NUMBER=12
[2025-11-26 11:00:46] Starting ATLAS job with PandaID=6897373266
[2025-11-26 11:00:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:16:50]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:16:50] 2025-11-26 23:15:57,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:16:50] 2025-11-26 23:15:57,713 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:16:50] 2025-11-26 23:15:57,714 | INFO     | sum of square deviations: 24311154677.240356
[2025-11-26 18:16:50] 2025-11-26 23:15:57,718 | INFO     | sum of deviations: 295639119882.32263
[2025-11-26 18:16:50] 2025-11-26 23:15:57,718 | INFO     | mean x: 1764185914.745327
[2025-11-26 18:16:50] 2025-11-26 23:15:57,718 | INFO     | mean y: 3404135.9112149533
[2025-11-26 18:16:50] 2025-11-26 23:15:57,718 | INFO     | intersect: -21450219851.450253
[2025-11-26 18:16:50] 2025-11-26 23:15:57,719 | INFO     | chi2: 7.28823346866459
[2025-11-26 18:16:50] 2025-11-26 23:15:57,719 | INFO     | sum of square deviations: 23469068586.9362
[2025-11-26 18:16:50] 2025-11-26 23:15:57,723 | INFO     | sum of deviations: 460712164598.695
[2025-11-26 18:16:50] 2025-11-26 23:15:57,723 | INFO     | mean x: 1764185762.248227
[2025-11-26 18:16:50] 2025-11-26 23:15:57,723 | INFO     | mean y: 3434000.260047281
[2025-11-26 18:16:50] 2025-11-26 23:15:57,723 | INFO     | intersect: -34628611079.36469
[2025-11-26 18:16:50] 2025-11-26 23:15:57,724 | INFO     | chi2: 4.166595863698369
[2025-11-26 18:16:50] 2025-11-26 23:15:57,724 | INFO     | current chi2=4.166595863698369 (change=42.83119659088244 %)
[2025-11-26 18:16:50] 2025-11-26 23:15:57,724 | INFO     | sum of square deviations: 22646657284.12436
[2025-11-26 18:16:50] 2025-11-26 23:15:57,728 | INFO     | sum of deviations: 563135809230.3099
[2025-11-26 18:16:50] 2025-11-26 23:15:57,728 | INFO     | mean x: 1764185609.7511961
[2025-11-26 18:16:50] 2025-11-26 23:15:57,728 | INFO     | mean y: 3452982.8779904307
[2025-11-26 18:16:50] 2025-11-26 23:15:57,728 | INFO     | intersect: -43865100266.088646
[2025-11-26 18:16:50] 2025-11-26 23:15:57,729 | INFO     | chi2: 2.8780963503370467
[2025-11-26 18:16:50] 2025-11-26 23:15:57,729 | INFO     | current chi2=2.8780963503370467 (change=30.92451381204079 %)
[2025-11-26 18:16:50] 2025-11-26 23:15:57,729 | INFO     | sum of square deviations: 21843688206.305004
[2025-11-26 18:16:50] 2025-11-26 23:15:57,733 | INFO     | sum of deviations: 593661332551.0342
[2025-11-26 18:16:50] 2025-11-26 23:15:57,733 | INFO     | mean x: 1764185457.2542372
[2025-11-26 18:16:50] 2025-11-26 23:15:57,733 | INFO     | mean y: 3458743.8377723973
[2025-11-26 18:16:50] 2025-11-26 23:15:57,734 | INFO     | intersect: -47943054662.19057
[2025-11-26 18:16:50] 2025-11-26 23:15:57,734 | INFO     | chi2: 2.590240555385377
[2025-11-26 18:16:50] 2025-11-26 23:15:57,734 | INFO     | current chi2=2.590240555385377 (change=10.001603835047417 %)
[2025-11-26 18:16:50] 2025-11-26 23:15:57,734 | INFO     | right removable region: 412
[2025-11-26 18:16:50] 2025-11-26 23:15:57,735 | INFO     | sum of square deviations: 23469004536.9362
[2025-11-26 18:16:50] 2025-11-26 23:15:57,739 | INFO     | sum of deviations: 150643503142.83676
[2025-11-26 18:16:50] 2025-11-26 23:15:57,739 | INFO     | mean x: 1764186067.248227
[2025-11-26 18:16:50] 2025-11-26 23:15:57,739 | INFO     | mean y: 3430319.7825059104
[2025-11-26 18:16:50] 2025-11-26 23:15:57,739 | INFO     | intersect: -11320576582.503925
[2025-11-26 18:16:50] 2025-11-26 23:15:57,739 | INFO     | chi2: 4.87014682462314
[2025-11-26 18:16:50] 2025-11-26 23:15:57,739 | INFO     | current chi2=4.87014682462314 (change=33.17795257846634 %)
[2025-11-26 18:16:50] 2025-11-26 23:15:57,740 | INFO     | sum of square deviations: 22646529184.12436
[2025-11-26 18:16:50] 2025-11-26 23:15:57,744 | INFO     | sum of deviations: 118899616132.18198
[2025-11-26 18:16:50] 2025-11-26 23:15:57,744 | INFO     | mean x: 1764186219.7511961
[2025-11-26 18:16:50] 2025-11-26 23:15:57,744 | INFO     | mean y: 3436198.6363636362
[2025-11-26 18:16:50] 2025-11-26 23:15:57,744 | INFO     | intersect: -9258957283.767506
[2025-11-26 18:16:50] 2025-11-26 23:15:57,745 | INFO     | chi2: 4.812613326233352
[2025-11-26 18:16:50] 2025-11-26 23:15:57,745 | INFO     | current chi2=4.812613326233352 (change=1.1813503876084792 %)
[2025-11-26 18:16:50] 2025-11-26 23:15:57,745 | INFO     | left removable region: 20
[2025-11-26 18:16:50] 2025-11-26 23:15:57,745 | INFO     | sum of square deviations: 18678071182.936237
[2025-11-26 18:16:50] 2025-11-26 23:15:57,749 | INFO     | sum of deviations: 374790396309.801
[2025-11-26 18:16:50] 2025-11-26 23:15:57,749 | INFO     | mean x: 1764186036.7627552
[2025-11-26 18:16:50] 2025-11-26 23:15:57,749 | INFO     | mean y: 3501026.7397959186
[2025-11-26 18:16:50] 2025-11-26 23:15:57,749 | INFO     | intersect: -35396298952.9596
[2025-11-26 18:16:50] 2025-11-26 23:15:57,749 | INFO     | chi2: 0.06214985500469102
[2025-11-26 18:16:50] 2025-11-26 23:15:57,750 | INFO     | current memory leak: 20.07 B/s (using 392 data points, chi2=0.06)
[2025-11-26 18:16:50] 2025-11-26 23:15:57,750 | INFO     | could have reported an average CPU frequency of 2388 MHz (18 samples)
[2025-11-26 18:16:50] 2025-11-26 23:15:57,750 | INFO     | ..............................
[2025-11-26 18:16:50] 2025-11-26 23:15:57,750 | INFO     | . Timing measurements:
[2025-11-26 18:16:50] 2025-11-26 23:15:57,750 | INFO     | . get job = 0 s
[2025-11-26 18:16:50] 2025-11-26 23:15:57,750 | INFO     | . initial setup = 2 s
[2025-11-26 18:16:50] 2025-11-26 23:15:57,750 | INFO     | . payload setup = 7 s
[2025-11-26 18:16:50] 2025-11-26 23:15:57,751 | INFO     | . stage-in = 0 s
[2025-11-26 18:16:50] 2025-11-26 23:15:57,751 | INFO     | . payload execution = 26060 s
[2025-11-26 18:16:50] 2025-11-26 23:15:57,751 | INFO     | . stage-out = 3 s
[2025-11-26 18:16:50] 2025-11-26 23:15:57,751 | INFO     | . log creation = 0 s
[2025-11-26 18:16:50] 2025-11-26 23:15:57,751 | INFO     | ..............................
[2025-11-26 18:16:50] 2025-11-26 23:15:57,831 | INFO     | 
[2025-11-26 18:16:50] 2025-11-26 23:15:57,831 | INFO     | job summary report
[2025-11-26 18:16:50] 2025-11-26 23:15:57,831 | INFO     | --------------------------------------------------
[2025-11-26 18:16:50] 2025-11-26 23:15:57,832 | INFO     | PanDA job id: 6897373266
[2025-11-26 18:16:50] 2025-11-26 23:15:57,832 | INFO     | task id: 47556161
[2025-11-26 18:16:50] 2025-11-26 23:15:57,832 | INFO     | errors: (none)
[2025-11-26 18:16:50] 2025-11-26 23:15:57,832 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:16:50] 2025-11-26 23:15:57,832 | INFO     | pilot state: finished 
[2025-11-26 18:16:50] 2025-11-26 23:15:57,832 | INFO     | transexitcode: 0
[2025-11-26 18:16:50] 2025-11-26 23:15:57,833 | INFO     | exeerrorcode: 0
[2025-11-26 18:16:50] 2025-11-26 23:15:57,833 | INFO     | exeerrordiag: 
[2025-11-26 18:16:50] 2025-11-26 23:15:57,833 | INFO     | exitcode: 0
[2025-11-26 18:16:50] 2025-11-26 23:15:57,833 | INFO     | exitmsg: OK
[2025-11-26 18:16:50] 2025-11-26 23:15:57,833 | INFO     | cpuconsumptiontime: 296736 s
[2025-11-26 18:16:50] 2025-11-26 23:15:57,833 | INFO     | nevents: 1000
[2025-11-26 18:16:50] 2025-11-26 23:15:57,833 | INFO     | neventsw: 0
[2025-11-26 18:16:50] 2025-11-26 23:15:57,834 | INFO     | pid: 14343
[2025-11-26 18:16:50] 2025-11-26 23:15:57,834 | INFO     | pgrp: 14343
[2025-11-26 18:16:50] 2025-11-26 23:15:57,834 | INFO     | corecount: 12
[2025-11-26 18:16:50] 2025-11-26 23:15:57,834 | INFO     | event service: False
[2025-11-26 18:16:50] 2025-11-26 23:15:57,834 | INFO     | sizes: {0: 2284265, 1: 2284265, 5: 2284555, 11: 2284611, 26072: 2321960, 26075: 2331138, 26080: 2331328}
[2025-11-26 18:16:50] 2025-11-26 23:15:57,834 | INFO     | --------------------------------------------------
[2025-11-26 18:16:50] 2025-11-26 23:15:57,834 | INFO     | 
[2025-11-26 18:16:50] 2025-11-26 23:15:57,834 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 18:16:50] 2025-11-26 23:15:57,858 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,858 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,858 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,859 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,859 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,859 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,859 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,859 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,859 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,860 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,860 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,860 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,861 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:16:50] 2025-11-26 23:15:57,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,861 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:16:50] 2025-11-26 23:15:57,861 | INFO     | job 6897373266 has completed (purged errors)
[2025-11-26 18:16:50] 2025-11-26 23:15:57,862 | INFO     | overall cleanup function is called
[2025-11-26 18:16:50] 2025-11-26 23:15:58,877 | INFO     | --- collectZombieJob: --- 10, [14343]
[2025-11-26 18:16:50] 2025-11-26 23:15:58,877 | INFO     | zombie collector waiting for pid 14343
[2025-11-26 18:16:50] 2025-11-26 23:15:58,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:16:50] 2025-11-26 23:15:58,878 | INFO     | collected zombie processes
[2025-11-26 18:16:50] 2025-11-26 23:15:58,878 | INFO     | will attempt to kill all subprocesses of pid=14343
[2025-11-26 18:16:50] 2025-11-26 23:15:58,969 | INFO     | process IDs to be killed: [14343] (in reverse order)
[2025-11-26 18:16:50] 2025-11-26 23:15:59,022 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:16:50] 2025-11-26 23:15:59,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:16:50] 2025-11-26 23:15:59,025 | INFO     | did not find any defunct processes belonging to 14343
[2025-11-26 18:16:50] 2025-11-26 23:15:59,028 | INFO     | did not find any defunct processes belonging to 14343
[2025-11-26 18:16:50] 2025-11-26 23:15:59,030 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:16:50] 2025-11-26 23:15:59,030 | INFO     | ready for new job
[2025-11-26 18:16:50] 2025-11-26 23:15:59,030 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:16:50] 2025-11-26 23:15:59,033 | INFO     | ***************************************
[2025-11-26 18:16:50] 2025-11-26 23:15:59,033 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:16:50] 2025-11-26 23:15:59,033 | INFO     | ***************************************
[2025-11-26 18:16:50] 2025-11-26 23:15:59,033 | INFO     | 
[2025-11-26 18:16:50] 2025-11-26 23:15:59,033 | INFO     | architecture information:
[2025-11-26 18:16:50] 2025-11-26 23:15:59,034 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:16:50] 2025-11-26 23:15:59,050 | INFO     | cat /etc/os-release:
[2025-11-26 18:16:50] NAME="CentOS Linux"
[2025-11-26 18:16:50] VERSION="7 (Core)"
[2025-11-26 18:16:50] ID="centos"
[2025-11-26 18:16:50] ID_LIKE="rhel fedora"
[2025-11-26 18:16:50] VERSION_ID="7"
[2025-11-26 18:16:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:16:50] ANSI_COLOR="0;31"
[2025-11-26 18:16:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:16:50] HOME_URL="https://www.centos.org/"
[2025-11-26 18:16:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:16:50] 
[2025-11-26 18:16:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:16:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:16:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:16:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:16:50] 
[2025-11-26 18:16:50] 2025-11-26 23:15:59,050 | INFO     | ***************************************
[2025-11-26 18:16:50] 2025-11-26 23:15:59,553 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 18:16:50] 2025-11-26 23:15:59,570 | INFO     | sufficient remaining disk space (28240248832 B)
[2025-11-26 18:16:50] 2025-11-26 23:15:59,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:16:50] 2025-11-26 23:15:59,570 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:16:50] 2025-11-26 23:15:59,571 | INFO     | update_server=False
[2025-11-26 18:16:50] 2025-11-26 23:15:59,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:16:50] 2025-11-26 23:15:59,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:16:50] 2025-11-26 23:15:59,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:16:50] 2025-11-26 23:15:59,572 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:16:50] 2025-11-26 23:15:59,572 | INFO     | aborting loop
[2025-11-26 18:16:50] 2025-11-26 23:15:59,591 | INFO     | all data control threads have been joined
[2025-11-26 18:16:50] 2025-11-26 23:15:59,593 | INFO     | all payload control threads have been joined
[2025-11-26 18:16:50] 2025-11-26 23:15:59,877 | INFO     | all job control threads have been joined
[2025-11-26 18:16:50] 2025-11-26 23:16:00,575 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:00,576 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:00,578 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:00,596 | INFO     | [data] control thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:00,599 | INFO     | [payload] control thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:00,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:16:50] 2025-11-26 23:16:00,747 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:00,871 [wrapper] supervise_pilot (15 min periods counter: 30)
[2025-11-26 18:16:50] 2025-11-26 23:16:00,882 | INFO     | [job] control thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:01,131 | INFO     | [job] validate thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:01,537 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:01,583 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:01,600 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:01,627 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:01,827 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:02,690 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:03,578 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:09,938 | INFO     | job.realtimelogging is not enabled
[2025-11-26 18:16:50] 2025-11-26 23:16:10,944 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:16:50] 2025-11-26 23:16:30,102 | INFO     | PID=7930 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 18:16:50] 2025-11-26 23:16:30,102 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:16:50] 2025-11-26 23:16:30,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:16:50] 2025-11-26 23:16:30,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:16:50] 2025-11-26 23:16:43,521 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:16:50] 2025-11-26 23:16:45,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140690383636288)>', '<ExcThread(monitor, started 140689941706496)>']
[2025-11-26 18:16:50] 2025-11-26 23:16:46,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:16:50] 2025-11-26 23:16:46,186 | INFO     | [monitor] control thread has ended
[2025-11-26 18:16:50] 2025-11-26 23:16:50,553 | INFO     | all workflow threads have been joined
[2025-11-26 18:16:50] 2025-11-26 23:16:50,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:16:50] 2025-11-26 23:16:50,554 | INFO     | traces error code: 0
[2025-11-26 18:16:50] 2025-11-26 23:16:50,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:16:50] 2025-11-26 23:16:50,712 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:16:50] 2025-11-26 23:16:50,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:16:50] 2025-11-26 23:16:50,721 [wrapper] pilotpid: 7930
[2025-11-26 18:16:50] 2025-11-26 23:16:50,725 [wrapper] Pilot exit status: 0
[2025-11-26 18:16:50] 2025-11-26 23:16:50,740 [wrapper] pandaids: 6897373266
[2025-11-26 18:16:50] 2025-11-26 23:16:50,794 [wrapper] cleanup supervisor_pilot 14543 7931
[2025-11-26 18:16:50] 2025-11-26 23:16:50,798 [wrapper] Test setup, not cleaning
[2025-11-26 18:16:50] 2025-11-26 23:16:50,802 [wrapper] apfmon messages muted
[2025-11-26 18:16:50] 2025-11-26 23:16:50,806 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:16:50] 2025-11-26 23:16:50,810 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:16:50]  *** Error codes and diagnostics ***
[2025-11-26 18:16:50]     "exeErrorCode": 0,
[2025-11-26 18:16:50]     "exeErrorDiag": "",
[2025-11-26 18:16:50]     "pilotErrorCode": 0,
[2025-11-26 18:16:50]     "pilotErrorDiag": "",
[2025-11-26 18:16:50]  *** Listing of results directory ***
[2025-11-26 18:16:50] total 1318468
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 18:16:50] -rwx------ 1 boincer umatlas     36292 Nov 25 11:55 runpilot2-wrapper.sh
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas       100 Nov 26 11:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:16:50] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 11:00 run_atlas
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas       105 Nov 26 11:00 job.xml
[2025-11-26 18:16:50] -rw-r--r-- 2 boincer umatlas 411627974 Nov 26 11:00 EVNT.47483658._002214.pool.root.1
[2025-11-26 18:16:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 11:00 start_atlas.sh
[2025-11-26 18:16:50] drwxrwx--x 2 boincer umatlas      4096 Nov 26 11:00 shared
[2025-11-26 18:16:50] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 11:00 input.tar.gz
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas         0 Nov 26 11:00 boinc_lockfile
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 11:00 pandaJob.out
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas        57 Nov 26 11:00 setup.sh.local
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas    991855 Nov 26 11:00 agis_schedconf.cvmfs.json
[2025-11-26 18:16:50] drwx------ 5 boincer umatlas      4096 Nov 26 11:01 pilot3
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas       532 Nov 26 18:02 boinc_task_state.xml
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas      5955 Nov 26 18:13 init_data.xml
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas 922866879 Nov 26 18:15 HITS.47556161._001973.pool.root.1
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas      1060 Nov 26 18:15 memory_monitor_summary.json
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas   1516240 Nov 26 18:15 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas   2192621 Nov 26 18:15 log.47556161._001973.job.log.tgz.1
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas      8663 Nov 26 18:15 heartbeat.json
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas        29 Nov 26 18:16 wrapper_checkpoint.txt
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 18:16 boinc_mmap_file
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas        95 Nov 26 18:16 pilot_heartbeat.json
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas      4817 Nov 26 18:16 pilotlog.txt
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas   3650390 Nov 26 18:16 log.47556161._001973.job.log.1
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas       353 Nov 26 18:16 output.list
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas       620 Nov 26 18:16 runtime_log
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas   5867520 Nov 26 18:16 result.tar.gz
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas      9345 Nov 26 18:16 runtime_log.err
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas       670 Nov 26 18:16 5gyNDmKVBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVUJKDmD2QsXm.diag
[2025-11-26 18:16:50] -rw-r--r-- 1 boincer umatlas     21065 Nov 26 18:16 stderr.txt
[2025-11-26 18:16:50] HITS file was successfully produced:
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas 922866879 Nov 26 18:15 shared/HITS.pool.root.1
[2025-11-26 18:16:50]  *** Contents of shared directory: ***
[2025-11-26 18:16:50] total 1309556
[2025-11-26 18:16:50] -rw-r--r-- 2 boincer umatlas 411627974 Nov 26 11:00 ATLAS.root_0
[2025-11-26 18:16:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 11:00 start_atlas.sh
[2025-11-26 18:16:50] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 11:00 input.tar.gz
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas 922866879 Nov 26 18:15 HITS.pool.root.1
[2025-11-26 18:16:50] -rw------- 1 boincer umatlas   5867520 Nov 26 18:16 result.tar.gz
18:16:52 (4121): run_atlas exited; CPU time 290080.286612
18:16:52 (4121): called boinc_finish(0)

</stderr_txt>
]]>

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