Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:28:16 (2802369): wrapper (7.7.26015): starting
11:28:16 (2802369): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 11:28:16] Arguments: --nthreads 8
[2025-11-26 11:28:16] Threads: 8
[2025-11-26 11:28:16] Checking for CVMFS
[2025-11-26 11:28:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:28:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:28:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:28:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:28:16] 2.13.3.0 11338 30156 247208 153328 3 439 26705986 32935936 46830 16776704 0 150095850 99.526 178987833 38896 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 11:28:16] CVMFS is ok
[2025-11-26 11:28:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:28:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:28:16] Further information can be found at the LHC@home message board.
[2025-11-26 11:28:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:28:16] Checking for apptainer binary...
[2025-11-26 11:28:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:28:16] Running /usr/bin/apptainer --version
[2025-11-26 11:28:16] apptainer version 1.4.4-1.el9
[2025-11-26 11:28:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:28:17] c7-3-17.aglt2.org
[2025-11-26 11:28:17] apptainer works
[2025-11-26 11:28:17] Set ATHENA_PROC_NUMBER=8
[2025-11-26 11:28:17] Set ATHENA_CORE_NUMBER=8
[2025-11-26 11:28:17] Starting ATLAS job with PandaID=6897998757
[2025-11-26 11:28:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:49:49]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:49:49] 2025-11-27 06:26:20,214 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 01:49:49] 2025-11-27 06:26:20,214 | INFO     | executing command: lscpu
[2025-11-27 01:49:49] 2025-11-27 06:26:20,279 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 01:49:49] 2025-11-27 06:26:21,156 | INFO     | monitor loop #3074: job 0:6897998757 is in state 'finished'
[2025-11-27 01:49:49] 2025-11-27 06:26:21,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:49:49] 2025-11-27 06:26:21,610 | INFO     | time since job start (50264s) is within the limit (172800.0s)
[2025-11-27 01:49:49] 2025-11-27 06:26:23,618 | INFO     | time since job start (50266s) is within the limit (172800.0s)
[2025-11-27 01:49:49] 2025-11-27 06:26:23,663 | INFO     | monitor loop #3075: job 0:6897998757 is in state 'finished'
[2025-11-27 01:49:49] 2025-11-27 06:26:23,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:49:49] 2025-11-27 06:26:25,626 | INFO     | time since job start (50268s) is within the limit (172800.0s)
[2025-11-27 01:49:49] 2025-11-27 06:26:26,178 | INFO     | monitor loop #3076: job 0:6897998757 is in state 'finished'
[2025-11-27 01:49:49] 2025-11-27 06:26:26,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:49:49] 2025-11-27 06:26:27,632 | INFO     | time since job start (50270s) is within the limit (172800.0s)
[2025-11-27 01:49:49] 2025-11-27 06:26:28,686 | INFO     | monitor loop #3077: job 0:6897998757 is in state 'finished'
[2025-11-27 01:49:49] 2025-11-27 06:26:28,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:49:49] 2025-11-27 06:26:29,424 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 01:49:49] 2025-11-27 06:26:29,431 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3152.673166666668
[2025-11-27 01:49:49] 2025-11-27 06:26:29,446 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6897998757/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:49:49] 2025-11-27 06:26:29,447 | INFO     | extracted standard info from prmon json
[2025-11-27 01:49:49] 2025-11-27 06:26:29,447 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:49:49] 2025-11-27 06:26:29,447 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:49:49] 2025-11-27 06:26:29,506 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:49:49] 2025-11-27 06:26:29,507 | INFO     | sum of square deviations: 173478126387.8144
[2025-11-27 01:49:49] 2025-11-27 06:26:29,525 | INFO     | sum of deviations: -1722498222908.485
[2025-11-27 01:49:49] 2025-11-27 06:26:29,526 | INFO     | mean x: 1764199656.8555825
[2025-11-27 01:49:49] 2025-11-27 06:26:29,526 | INFO     | mean y: 2740088.844660194
[2025-11-27 01:49:49] 2025-11-27 06:26:29,526 | INFO     | intersect: 17519823291.577225
[2025-11-27 01:49:49] 2025-11-27 06:26:29,527 | INFO     | chi2: 42.62586474102342
[2025-11-27 01:49:49] 2025-11-27 06:26:29,527 | INFO     | sum of square deviations: 170339254572.17816
[2025-11-27 01:49:49] 2025-11-27 06:26:29,607 | INFO     | sum of deviations: -1456393883513.3489
[2025-11-27 01:49:49] 2025-11-27 06:26:29,607 | INFO     | mean x: 1764199504.3577533
[2025-11-27 01:49:49] 2025-11-27 06:26:29,607 | INFO     | mean y: 2753014.2673992673
[2025-11-27 01:49:49] 2025-11-27 06:26:29,607 | INFO     | intersect: 15086588938.623812
[2025-11-27 01:49:49] 2025-11-27 06:26:29,608 | INFO     | chi2: 38.761773319104094
[2025-11-27 01:49:49] 2025-11-27 06:26:29,608 | INFO     | current chi2=38.761773319104094 (change=9.065133212888227 %)
[2025-11-27 01:49:49] 2025-11-27 06:26:29,608 | INFO     | right removable region: 818
[2025-11-27 01:49:49] 2025-11-27 06:26:29,609 | INFO     | sum of square deviations: 170339075842.17834
[2025-11-27 01:49:49] 2025-11-27 06:26:29,623 | INFO     | sum of deviations: -1970087185396.2998
[2025-11-27 01:49:49] 2025-11-27 06:26:29,624 | INFO     | mean x: 1764199809.3577533
[2025-11-27 01:49:49] 2025-11-27 06:26:29,624 | INFO     | mean y: 2752106.5982905985
[2025-11-27 01:49:49] 2025-11-27 06:26:29,624 | INFO     | intersect: 20406921964.338535
[2025-11-27 01:49:49] 2025-11-27 06:26:29,625 | INFO     | chi2: 40.09199683654567
[2025-11-27 01:49:49] 2025-11-27 06:26:29,625 | INFO     | current chi2=40.09199683654567 (change=5.944437537801176 %)
[2025-11-27 01:49:49] 2025-11-27 06:26:29,625 | INFO     | left removable region: 10
[2025-11-27 01:49:49] 2025-11-27 06:26:29,626 | INFO     | sum of square deviations: 163567141625.75104
[2025-11-27 01:49:49] 2025-11-27 06:26:29,640 | INFO     | sum of deviations: -1682476537658.2327
[2025-11-27 01:49:49] 2025-11-27 06:26:29,640 | INFO     | mean x: 1764199778.8626237
[2025-11-27 01:49:49] 2025-11-27 06:26:29,640 | INFO     | mean y: 2769143.826732673
[2025-11-27 01:49:49] 2025-11-27 06:26:29,640 | INFO     | intersect: 18149596839.02262
[2025-11-27 01:49:49] 2025-11-27 06:26:29,641 | INFO     | chi2: 35.48116800067972
[2025-11-27 01:49:49] 2025-11-27 06:26:29,641 | INFO     | current memory leak: -10.29 B/s (using 808 data points, chi2=35.48)
[2025-11-27 01:49:49] 2025-11-27 06:26:29,643 | INFO     | could have reported an average CPU frequency of 3080 MHz (31 samples)
[2025-11-27 01:49:49] 2025-11-27 06:26:29,643 | INFO     | ..............................
[2025-11-27 01:49:49] 2025-11-27 06:26:29,643 | INFO     | . Timing measurements:
[2025-11-27 01:49:49] 2025-11-27 06:26:29,643 | INFO     | . get job = 0 s
[2025-11-27 01:49:49] 2025-11-27 06:26:29,643 | INFO     | . initial setup = 5 s
[2025-11-27 01:49:49] 2025-11-27 06:26:29,643 | INFO     | . payload setup = 10 s
[2025-11-27 01:49:49] 2025-11-27 06:26:29,643 | INFO     | . stage-in = 0 s
[2025-11-27 01:49:49] 2025-11-27 06:26:29,643 | INFO     | . payload execution = 50220 s
[2025-11-27 01:49:49] 2025-11-27 06:26:29,644 | INFO     | . stage-out = 4 s
[2025-11-27 01:49:49] 2025-11-27 06:26:29,644 | INFO     | . log creation = 1 s
[2025-11-27 01:49:49] 2025-11-27 06:26:29,644 | INFO     | ..............................
[2025-11-27 01:49:49] 2025-11-27 06:26:29,663 | INFO     | time since job start (50272s) is within the limit (172800.0s)
[2025-11-27 01:49:49] 2025-11-27 06:26:30,225 | INFO     | 
[2025-11-27 01:49:49] 2025-11-27 06:26:30,226 | INFO     | job summary report
[2025-11-27 01:49:49] 2025-11-27 06:26:30,226 | INFO     | --------------------------------------------------
[2025-11-27 01:49:49] 2025-11-27 06:26:30,226 | INFO     | PanDA job id: 6897998757
[2025-11-27 01:49:49] 2025-11-27 06:26:30,226 | INFO     | task id: 47556161
[2025-11-27 01:49:49] 2025-11-27 06:26:30,226 | INFO     | errors: (none)
[2025-11-27 01:49:49] 2025-11-27 06:26:30,226 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:49:49] 2025-11-27 06:26:30,226 | INFO     | pilot state: finished 
[2025-11-27 01:49:49] 2025-11-27 06:26:30,226 | INFO     | transexitcode: 0
[2025-11-27 01:49:49] 2025-11-27 06:26:30,226 | INFO     | exeerrorcode: 0
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | exeerrordiag: 
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | exitcode: 0
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | exitmsg: OK
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | cpuconsumptiontime: 201566 s
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | nevents: 1000
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | neventsw: 0
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | pid: 2814610
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | pgrp: 2814610
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | corecount: 8
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | event service: False
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | sizes: {0: 2284258, 8: 2284520, 11: 2284548, 50235: 2332984, 50241: 2341978, 50244: 2342034, 50254: 2342408}
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | --------------------------------------------------
[2025-11-27 01:49:49] 2025-11-27 06:26:30,227 | INFO     | 
[2025-11-27 01:49:49] 2025-11-27 06:26:30,228 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 01:49:49] 2025-11-27 06:26:30,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,315 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,315 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,315 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,316 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,316 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:49:49] 2025-11-27 06:26:30,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,316 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:49:49] 2025-11-27 06:26:30,317 | INFO     | job 6897998757 has completed (purged errors)
[2025-11-27 01:49:49] 2025-11-27 06:26:30,317 | INFO     | overall cleanup function is called
[2025-11-27 01:49:49] 2025-11-27 06:26:31,338 | INFO     | --- collectZombieJob: --- 10, [2814610]
[2025-11-27 01:49:49] 2025-11-27 06:26:31,339 | INFO     | zombie collector waiting for pid 2814610
[2025-11-27 01:49:49] 2025-11-27 06:26:31,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:49:49] 2025-11-27 06:26:31,339 | INFO     | collected zombie processes
[2025-11-27 01:49:49] 2025-11-27 06:26:31,339 | INFO     | will attempt to kill all subprocesses of pid=2814610
[2025-11-27 01:49:49] 2025-11-27 06:26:33,401 | INFO     | process IDs to be killed: [2814610] (in reverse order)
[2025-11-27 01:49:49] 2025-11-27 06:26:33,669 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:49:49] 2025-11-27 06:26:33,669 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:49:49] 2025-11-27 06:26:33,759 | INFO     | did not find any defunct processes belonging to 2814610
[2025-11-27 01:49:49] 2025-11-27 06:26:33,805 | INFO     | did not find any defunct processes belonging to 2814610
[2025-11-27 01:49:49] 2025-11-27 06:26:33,814 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:49:49] 2025-11-27 06:26:33,815 | INFO     | ready for new job
[2025-11-27 01:49:49] 2025-11-27 06:26:33,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:49:49] 2025-11-27 06:26:33,841 | INFO     | ***************************************
[2025-11-27 01:49:49] 2025-11-27 06:26:33,841 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:49:49] 2025-11-27 06:26:33,841 | INFO     | ***************************************
[2025-11-27 01:49:49] 2025-11-27 06:26:33,841 | INFO     | 
[2025-11-27 01:49:49] 2025-11-27 06:26:33,846 | INFO     | architecture information:
[2025-11-27 01:49:49] 2025-11-27 06:26:33,847 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:49:49] 2025-11-27 06:26:33,873 | INFO     | cat /etc/os-release:
[2025-11-27 01:49:49] NAME="CentOS Linux"
[2025-11-27 01:49:49] VERSION="7 (Core)"
[2025-11-27 01:49:49] ID="centos"
[2025-11-27 01:49:49] ID_LIKE="rhel fedora"
[2025-11-27 01:49:49] VERSION_ID="7"
[2025-11-27 01:49:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:49:49] ANSI_COLOR="0;31"
[2025-11-27 01:49:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:49:49] HOME_URL="https://www.centos.org/"
[2025-11-27 01:49:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:49:49] 
[2025-11-27 01:49:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:49:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:49:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:49:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:49:49] 
[2025-11-27 01:49:49] 2025-11-27 06:26:33,873 | INFO     | ***************************************
[2025-11-27 01:49:49] 2025-11-27 06:26:34,376 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 01:49:49] 2025-11-27 06:26:34,403 | INFO     | sufficient remaining disk space (66279440384 B)
[2025-11-27 01:49:49] 2025-11-27 06:26:34,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:49:49] 2025-11-27 06:26:34,404 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:49:49] 2025-11-27 06:26:34,404 | INFO     | update_server=False
[2025-11-27 01:49:49] 2025-11-27 06:26:34,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:49:49] 2025-11-27 06:26:34,549 | INFO     | all job control threads have been joined
[2025-11-27 01:49:49] 2025-11-27 06:26:34,553 | INFO     | all data control threads have been joined
[2025-11-27 01:49:49] 2025-11-27 06:26:34,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:49:49] 2025-11-27 06:26:34,731 | INFO     | aborting loop
[2025-11-27 01:49:49] 2025-11-27 06:26:34,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:49:49] 2025-11-27 06:26:34,856 | INFO     | all payload control threads have been joined
[2025-11-27 01:49:49] 2025-11-27 06:26:34,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:49:49] 2025-11-27 06:26:35,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:49:49] 2025-11-27 06:26:35,410 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:35,556 | INFO     | [job] control thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:35,579 | INFO     | [data] control thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:35,700 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:35,736 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:35,791 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:35,863 | INFO     | [payload] control thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:35,873 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:36,000 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:36,467 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:36,558 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:36,687 | INFO     | [job] validate thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:36,766 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:36,825 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:39,399 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:26:44,849 | INFO     | job.realtimelogging is not enabled
[2025-11-27 01:49:49] 2025-11-27 06:26:45,854 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:49:49] 2025-11-27 06:27:03,615 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:49:49] 2025-11-27 06:27:04,254 | INFO     | PID=2807096 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 01:49:49] 2025-11-27 06:27:04,254 | INFO     | .. there are 61 such processes running
[2025-11-27 01:49:49] 2025-11-27 06:27:04,254 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:49:49] 2025-11-27 06:27:04,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:49:49] 2025-11-27 06:27:04,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:49:49] 2025-11-27 06:27:04,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048830760768)>', '<ExcThread(monitor, started 140048347428608)>']
[2025-11-27 01:49:49] 2025-11-27 06:27:05,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:49:49] 2025-11-27 06:27:05,261 | INFO     | [monitor] control thread has ended
[2025-11-27 01:49:49] 2025-11-27 06:27:09,835 | INFO     | all workflow threads have been joined
[2025-11-27 01:49:49] 2025-11-27 06:27:09,836 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:49:49] 2025-11-27 06:27:09,836 | INFO     | traces error code: 0
[2025-11-27 01:49:49] 2025-11-27 06:27:09,836 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:49:49] 2025-11-27 06:27:10,070 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:49:49] 2025-11-27 06:27:10,074 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:49:49] 2025-11-27 06:27:10,076 [wrapper] pilotpid: 2807096
[2025-11-27 01:49:49] 2025-11-27 06:27:10,085 [wrapper] Pilot exit status: 0
[2025-11-27 01:49:49] 2025-11-27 06:27:10,106 [wrapper] pandaids: 6897998757
[2025-11-27 01:49:49] 2025-11-27 06:27:10,254 [wrapper] cleanup supervisor_pilot 4093398 2807097
[2025-11-27 01:49:49] 2025-11-27 06:27:10,259 [wrapper] Test setup, not cleaning
[2025-11-27 01:49:49] 2025-11-27 06:27:10,267 [wrapper] apfmon messages muted
[2025-11-27 01:49:49] 2025-11-27 06:27:10,269 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:49:49] 2025-11-27 06:27:10,275 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:49:49]  *** Error codes and diagnostics ***
[2025-11-27 01:49:49]     "exeErrorCode": 0,
[2025-11-27 01:49:49]     "exeErrorDiag": "",
[2025-11-27 01:49:49]     "pilotErrorCode": 0,
[2025-11-27 01:49:49]     "pilotErrorDiag": "",
[2025-11-27 01:49:49]  *** Listing of results directory ***
[2025-11-27 01:49:49] total 1321772
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:26 queuedata.json
[2025-11-27 01:49:49] -rwx------. 1 boincer umatlas     36292 Nov 25 21:29 runpilot2-wrapper.sh
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas       100 Nov 26 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:49:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 11:28 run_atlas
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas       105 Nov 26 11:28 job.xml
[2025-11-27 01:49:49] -rw-r--r--. 2 boincer umatlas 410752273 Nov 26 11:28 EVNT.47483658._002379.pool.root.1
[2025-11-27 01:49:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 11:28 start_atlas.sh
[2025-11-27 01:49:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 11:28 shared
[2025-11-27 01:49:49] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 11:28 input.tar.gz
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas         0 Nov 26 11:28 boinc_lockfile
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas      2782 Nov 26 11:28 pandaJob.out
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas        57 Nov 26 11:28 setup.sh.local
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas    991545 Nov 26 11:28 agis_schedconf.cvmfs.json
[2025-11-27 01:49:49] drwx------. 5 boincer umatlas      4096 Nov 26 11:28 pilot3
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas       533 Nov 27 00:22 boinc_task_state.xml
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas 921897963 Nov 27 01:25 HITS.47556161._003611.pool.root.1
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas      1062 Nov 27 01:26 memory_monitor_summary.json
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas   1516240 Nov 27 01:26 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas   2011167 Nov 27 01:26 log.47556161._003611.job.log.tgz.1
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas        95 Nov 27 01:26 pilot_heartbeat.json
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas      8606 Nov 27 01:26 heartbeat.json
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas      4896 Nov 27 01:27 pilotlog.txt
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas   6448505 Nov 27 01:27 log.47556161._003611.job.log.1
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas       353 Nov 27 01:27 output.list
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas       620 Nov 27 01:27 runtime_log
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas   8478720 Nov 27 01:27 result.tar.gz
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 01:27 runtime_log.err
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas       663 Nov 27 01:27 eJYMDm4SKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvjMKDm5nELJm.diag
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 01:49 init_data.xml
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 01:49 boinc_mmap_file
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas        29 Nov 27 01:49 wrapper_checkpoint.txt
[2025-11-27 01:49:49] -rw-r--r--. 1 boincer umatlas     21772 Nov 27 01:49 stderr.txt
[2025-11-27 01:49:49] HITS file was successfully produced:
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas 921897963 Nov 27 01:25 shared/HITS.pool.root.1
[2025-11-27 01:49:49]  *** Contents of shared directory: ***
[2025-11-27 01:49:49] total 1310304
[2025-11-27 01:49:49] -rw-r--r--. 2 boincer umatlas 410752273 Nov 26 11:28 ATLAS.root_0
[2025-11-27 01:49:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 11:28 start_atlas.sh
[2025-11-27 01:49:49] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 11:28 input.tar.gz
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas 921897963 Nov 27 01:25 HITS.pool.root.1
[2025-11-27 01:49:49] -rw-------. 1 boincer umatlas   8478720 Nov 27 01:27 result.tar.gz
01:49:51 (2802369): run_atlas exited; CPU time 203511.410693
01:49:51 (2802369): called boinc_finish(0)

</stderr_txt>
]]>

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