Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:37:57 (1951876): wrapper (7.7.26015): starting
11:37:57 (1951876): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 11:37:57] Arguments: --nthreads 8
[2025-11-26 11:37:57] Threads: 8
[2025-11-26 11:37:57] Checking for CVMFS
[2025-11-26 11:37:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:37:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:37:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:37:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:37:59] 2.13.3.0 10079 28602 416776 153328 1 705 22923172 32935937 64840 16776704 0 314270020 99.795 161067626 29105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 11:37:59] CVMFS is ok
[2025-11-26 11:38:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:38:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:38:00] Further information can be found at the LHC@home message board.
[2025-11-26 11:38:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:38:00] Checking for apptainer binary...
[2025-11-26 11:38:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:38:00] Running /usr/bin/apptainer --version
[2025-11-26 11:38:00] apptainer version 1.4.4-1.el9
[2025-11-26 11:38:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:38:00] lc-12-33.aglt2.org
[2025-11-26 11:38:00] apptainer works
[2025-11-26 11:38:01] Set ATHENA_PROC_NUMBER=8
[2025-11-26 11:38:01] Set ATHENA_CORE_NUMBER=8
[2025-11-26 11:38:01] Starting ATLAS job with PandaID=6897394495
[2025-11-26 11:38:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:28:37]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:28:37] 2025-11-27 07:27:39,053 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:28:37] 2025-11-27 07:27:39,086 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:28:37] 2025-11-27 07:27:39,088 | INFO     | sum of square deviations: 205601777326.0
[2025-11-27 02:28:37] 2025-11-27 07:27:39,119 | INFO     | sum of deviations: 1088571124112.9993
[2025-11-27 02:28:37] 2025-11-27 07:27:39,120 | INFO     | mean x: 1764201831.0
[2025-11-27 02:28:37] 2025-11-27 07:27:39,120 | INFO     | mean y: 2870321.872706422
[2025-11-27 02:28:37] 2025-11-27 07:27:39,120 | INFO     | intersect: -9337803651.430655
[2025-11-27 02:28:37] 2025-11-27 07:27:39,121 | INFO     | chi2: 11.665587196064667
[2025-11-27 02:28:37] 2025-11-27 07:27:39,122 | INFO     | sum of square deviations: 202085948354.56827
[2025-11-27 02:28:37] 2025-11-27 07:27:39,166 | INFO     | sum of deviations: 1383697806013.1484
[2025-11-27 02:28:37] 2025-11-27 07:27:39,166 | INFO     | mean x: 1764201678.5144176
[2025-11-27 02:28:37] 2025-11-27 07:27:39,166 | INFO     | mean y: 2883119.7081891582
[2025-11-27 02:28:37] 2025-11-27 07:27:39,166 | INFO     | intersect: -12076739495.329165
[2025-11-27 02:28:37] 2025-11-27 07:27:39,181 | INFO     | chi2: 8.40836048215982
[2025-11-27 02:28:37] 2025-11-27 07:27:39,181 | INFO     | current chi2=8.40836048215982 (change=27.921669601026665 %)
[2025-11-27 02:28:37] 2025-11-27 07:27:39,182 | INFO     | sum of square deviations: 198610392715.33176
[2025-11-27 02:28:37] 2025-11-27 07:27:39,202 | INFO     | sum of deviations: 1674312633696.9934
[2025-11-27 02:28:37] 2025-11-27 07:27:39,203 | INFO     | mean x: 1764201526.0278423
[2025-11-27 02:28:37] 2025-11-27 07:27:39,203 | INFO     | mean y: 2895863.625290023
[2025-11-27 02:28:37] 2025-11-27 07:27:39,203 | INFO     | intersect: -14869563039.618752
[2025-11-27 02:28:37] 2025-11-27 07:27:39,204 | INFO     | chi2: 5.17242407049293
[2025-11-27 02:28:37] 2025-11-27 07:27:39,204 | INFO     | current chi2=5.17242407049293 (change=38.48474882270614 %)
[2025-11-27 02:28:37] 2025-11-27 07:27:39,205 | INFO     | sum of square deviations: 195174668445.1645
[2025-11-27 02:28:37] 2025-11-27 07:27:39,219 | INFO     | sum of deviations: 1767106277027.9365
[2025-11-27 02:28:37] 2025-11-27 07:27:39,219 | INFO     | mean x: 1764201373.5355892
[2025-11-27 02:28:37] 2025-11-27 07:27:39,219 | INFO     | mean y: 2899977.723453909
[2025-11-27 02:28:37] 2025-11-27 07:27:39,219 | INFO     | intersect: -15970132516.459759
[2025-11-27 02:28:37] 2025-11-27 07:27:39,220 | INFO     | chi2: 4.707824932789149
[2025-11-27 02:28:37] 2025-11-27 07:27:39,220 | INFO     | current chi2=4.707824932789149 (change=8.98223214825279 %)
[2025-11-27 02:28:37] 2025-11-27 07:27:39,220 | INFO     | right removable region: 856
[2025-11-27 02:28:37] 2025-11-27 07:27:39,221 | INFO     | sum of square deviations: 202084618554.56842
[2025-11-27 02:28:37] 2025-11-27 07:27:39,236 | INFO     | time since job start (53324s) is within the limit (172800.0s)
[2025-11-27 02:28:37] 2025-11-27 07:27:39,260 | INFO     | sum of deviations: 758920865820.2146
[2025-11-27 02:28:37] 2025-11-27 07:27:39,260 | INFO     | mean x: 1764201983.5144176
[2025-11-27 02:28:37] 2025-11-27 07:27:39,260 | INFO     | mean y: 2884612.1430219146
[2025-11-27 02:28:37] 2025-11-27 07:27:39,261 | INFO     | intersect: -6622506802.537877
[2025-11-27 02:28:37] 2025-11-27 07:27:39,297 | INFO     | chi2: 7.980848323037778
[2025-11-27 02:28:37] 2025-11-27 07:27:39,297 | INFO     | current chi2=7.980848323037778 (change=31.5863986192647 %)
[2025-11-27 02:28:37] 2025-11-27 07:27:39,298 | INFO     | sum of square deviations: 198607996824.48822
[2025-11-27 02:28:37] 2025-11-27 07:27:39,313 | INFO     | sum of deviations: 622716291702.9535
[2025-11-27 02:28:37] 2025-11-27 07:27:39,314 | INFO     | mean x: 1764202136.0243618
[2025-11-27 02:28:37] 2025-11-27 07:27:39,314 | INFO     | mean y: 2890578.145011601
[2025-11-27 02:28:37] 2025-11-27 07:27:39,314 | INFO     | intersect: -5528595714.072926
[2025-11-27 02:28:37] 2025-11-27 07:27:39,315 | INFO     | chi2: 7.304802604917813
[2025-11-27 02:28:37] 2025-11-27 07:27:39,315 | INFO     | current chi2=7.304802604917813 (change=8.470850350187321 %)
[2025-11-27 02:28:37] 2025-11-27 07:27:39,315 | INFO     | left removable region: 20
[2025-11-27 02:28:37] 2025-11-27 07:27:39,316 | INFO     | sum of square deviations: 181174355607.38168
[2025-11-27 02:28:37] 2025-11-27 07:27:39,332 | INFO     | sum of deviations: 1225243486237.8677
[2025-11-27 02:28:37] 2025-11-27 07:27:39,333 | INFO     | mean x: 1764201953.0657895
[2025-11-27 02:28:37] 2025-11-27 07:27:39,333 | INFO     | mean y: 2925052.8205741625
[2025-11-27 02:28:37] 2025-11-27 07:27:39,333 | INFO     | intersect: -11927996098.549662
[2025-11-27 02:28:37] 2025-11-27 07:27:39,334 | INFO     | chi2: 0.20358601738401338
[2025-11-27 02:28:37] 2025-11-27 07:27:39,334 | INFO     | current memory leak: 6.76 B/s (using 836 data points, chi2=0.20)
[2025-11-27 02:28:37] 2025-11-27 07:27:39,335 | INFO     | could have reported an average CPU frequency of 2756 MHz (33 samples)
[2025-11-27 02:28:37] 2025-11-27 07:27:39,335 | INFO     | ..............................
[2025-11-27 02:28:37] 2025-11-27 07:27:39,335 | INFO     | . Timing measurements:
[2025-11-27 02:28:37] 2025-11-27 07:27:39,336 | INFO     | . get job = 0 s
[2025-11-27 02:28:37] 2025-11-27 07:27:39,336 | INFO     | . initial setup = 3 s
[2025-11-27 02:28:37] 2025-11-27 07:27:39,336 | INFO     | . payload setup = 32 s
[2025-11-27 02:28:37] 2025-11-27 07:27:39,336 | INFO     | . stage-in = 0 s
[2025-11-27 02:28:37] 2025-11-27 07:27:39,336 | INFO     | . payload execution = 53187 s
[2025-11-27 02:28:37] 2025-11-27 07:27:39,336 | INFO     | . stage-out = 6 s
[2025-11-27 02:28:37] 2025-11-27 07:27:39,336 | INFO     | . log creation = 1 s
[2025-11-27 02:28:37] 2025-11-27 07:27:39,336 | INFO     | ..............................
[2025-11-27 02:28:37] 2025-11-27 07:27:39,762 | INFO     | 
[2025-11-27 02:28:37] 2025-11-27 07:27:39,762 | INFO     | job summary report
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | --------------------------------------------------
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | PanDA job id: 6897394495
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | task id: 47556173
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | errors: (none)
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | pilot state: finished 
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | transexitcode: 0
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | exeerrorcode: 0
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | exeerrordiag: 
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | exitcode: 0
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | exitmsg: OK
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | cpuconsumptiontime: 249355 s
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | nevents: 1000
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | neventsw: 0
[2025-11-27 02:28:37] 2025-11-27 07:27:39,763 | INFO     | pid: 1977925
[2025-11-27 02:28:37] 2025-11-27 07:27:39,764 | INFO     | pgrp: 1977925
[2025-11-27 02:28:37] 2025-11-27 07:27:39,764 | INFO     | corecount: 8
[2025-11-27 02:28:37] 2025-11-27 07:27:39,764 | INFO     | event service: False
[2025-11-27 02:28:37] 2025-11-27 07:27:39,764 | INFO     | sizes: {0: 2284036, 1: 2284291, 2: 2284291, 13: 2284319, 24: 2284375, 31: 2284665, 35: 2284821, 53224: 2333766, 53231: 2342816, 53259: 2343070}
[2025-11-27 02:28:37] 2025-11-27 07:27:39,764 | INFO     | --------------------------------------------------
[2025-11-27 02:28:37] 2025-11-27 07:27:39,764 | INFO     | 
[2025-11-27 02:28:37] 2025-11-27 07:27:39,764 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 02:28:37] 2025-11-27 07:27:39,951 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,952 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,952 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,952 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,952 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,975 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:28:37] 2025-11-27 07:27:39,976 | INFO     | job 6897394495 has completed (purged errors)
[2025-11-27 02:28:37] 2025-11-27 07:27:39,976 | INFO     | overall cleanup function is called
[2025-11-27 02:28:37] 2025-11-27 07:27:41,188 | INFO     | --- collectZombieJob: --- 10, [1977925]
[2025-11-27 02:28:37] 2025-11-27 07:27:41,188 | INFO     | zombie collector waiting for pid 1977925
[2025-11-27 02:28:37] 2025-11-27 07:27:41,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:28:37] 2025-11-27 07:27:41,188 | INFO     | collected zombie processes
[2025-11-27 02:28:37] 2025-11-27 07:27:41,188 | INFO     | will attempt to kill all subprocesses of pid=1977925
[2025-11-27 02:28:37] 2025-11-27 07:27:42,339 | INFO     | process IDs to be killed: [1977925] (in reverse order)
[2025-11-27 02:28:37] 2025-11-27 07:27:42,681 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:28:37] 2025-11-27 07:27:42,682 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:28:37] 2025-11-27 07:27:42,710 | INFO     | did not find any defunct processes belonging to 1977925
[2025-11-27 02:28:37] 2025-11-27 07:27:42,738 | INFO     | did not find any defunct processes belonging to 1977925
[2025-11-27 02:28:37] 2025-11-27 07:27:42,782 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:28:37] 2025-11-27 07:27:42,782 | INFO     | ready for new job
[2025-11-27 02:28:37] 2025-11-27 07:27:42,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:28:37] 2025-11-27 07:27:42,812 | INFO     | ***************************************
[2025-11-27 02:28:37] 2025-11-27 07:27:42,812 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:28:37] 2025-11-27 07:27:42,812 | INFO     | ***************************************
[2025-11-27 02:28:37] 2025-11-27 07:27:42,812 | INFO     | 
[2025-11-27 02:28:37] 2025-11-27 07:27:42,882 | INFO     | architecture information:
[2025-11-27 02:28:37] 2025-11-27 07:27:42,919 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:28:37] 2025-11-27 07:27:43,094 | INFO     | cat /etc/os-release:
[2025-11-27 02:28:37] NAME="CentOS Linux"
[2025-11-27 02:28:37] VERSION="7 (Core)"
[2025-11-27 02:28:37] ID="centos"
[2025-11-27 02:28:37] ID_LIKE="rhel fedora"
[2025-11-27 02:28:37] VERSION_ID="7"
[2025-11-27 02:28:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:28:37] ANSI_COLOR="0;31"
[2025-11-27 02:28:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:28:37] HOME_URL="https://www.centos.org/"
[2025-11-27 02:28:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:28:37] 
[2025-11-27 02:28:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:28:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:28:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:28:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:28:37] 
[2025-11-27 02:28:37] 2025-11-27 07:27:43,094 | INFO     | ***************************************
[2025-11-27 02:28:37] 2025-11-27 07:27:43,597 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 02:28:37] 2025-11-27 07:27:43,697 | INFO     | sufficient remaining disk space (63540559872 B)
[2025-11-27 02:28:37] 2025-11-27 07:27:43,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:28:37] 2025-11-27 07:27:43,697 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:28:37] 2025-11-27 07:27:43,697 | INFO     | update_server=False
[2025-11-27 02:28:37] 2025-11-27 07:27:43,697 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:28:37] 2025-11-27 07:27:43,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:28:37] 2025-11-27 07:27:43,698 | INFO     | aborting loop
[2025-11-27 02:28:37] 2025-11-27 07:27:44,049 | INFO     | all data control threads have been joined
[2025-11-27 02:28:37] 2025-11-27 07:27:44,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:28:37] 2025-11-27 07:27:44,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:28:37] 2025-11-27 07:27:44,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:28:37] 2025-11-27 07:27:44,719 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:44,720 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:44,771 | INFO     | all job control threads have been joined
[2025-11-27 02:28:37] 2025-11-27 07:27:45,007 | INFO     | all payload control threads have been joined
[2025-11-27 02:28:37] 2025-11-27 07:27:45,055 | INFO     | [data] control thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:45,329 | INFO     | [job] validate thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:45,408 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:45,482 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:45,615 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:45,681 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:45,776 | INFO     | [job] control thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:45,903 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:45,917 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:45,918 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:45,964 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:46,014 | INFO     | [payload] control thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:46,385 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:27:48,388 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:28:37] 2025-11-27 07:28:14,422 | INFO     | PID=1956343 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:28:37] 2025-11-27 07:28:14,422 | INFO     | .. there are 90 such processes running
[2025-11-27 02:28:37] 2025-11-27 07:28:14,423 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:28:37] 2025-11-27 07:28:14,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:28:37] 2025-11-27 07:28:14,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:28:37] 2025-11-27 07:28:30,949 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:28:37] 2025-11-27 07:28:31,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957376751424)>', '<ExcThread(monitor, started 139956735436544)>']
[2025-11-27 02:28:37] 2025-11-27 07:28:31,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:28:37] 2025-11-27 07:28:31,575 | INFO     | [monitor] control thread has ended
[2025-11-27 02:28:37] 2025-11-27 07:28:36,405 | INFO     | all workflow threads have been joined
[2025-11-27 02:28:37] 2025-11-27 07:28:36,405 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:28:37] 2025-11-27 07:28:36,406 | INFO     | traces error code: 0
[2025-11-27 02:28:37] 2025-11-27 07:28:36,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:28:37] 2025-11-27 07:28:36,777 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:28:37] 2025-11-27 07:28:36,780 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:28:37] 2025-11-27 07:28:36,783 [wrapper] pilotpid: 1956343
[2025-11-27 02:28:37] 2025-11-27 07:28:36,786 [wrapper] Pilot exit status: 0
[2025-11-27 02:28:37] 2025-11-27 07:28:36,802 [wrapper] pandaids: 6897394495
[2025-11-27 02:28:37] 2025-11-27 07:28:36,957 [wrapper] cleanup supervisor_pilot  412398 1956344
[2025-11-27 02:28:37] 2025-11-27 07:28:36,976 [wrapper] Test setup, not cleaning
[2025-11-27 02:28:37] 2025-11-27 07:28:36,999 [wrapper] apfmon messages muted
[2025-11-27 02:28:37] 2025-11-27 07:28:37,013 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:28:37] 2025-11-27 07:28:37,030 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:28:37]  *** Error codes and diagnostics ***
[2025-11-27 02:28:37]     "exeErrorCode": 0,
[2025-11-27 02:28:37]     "exeErrorDiag": "",
[2025-11-27 02:28:37]     "pilotErrorCode": 0,
[2025-11-27 02:28:37]     "pilotErrorDiag": "",
[2025-11-27 02:28:37]  *** Listing of results directory ***
[2025-11-27 02:28:37] total 1323168
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas    598293 Nov  6 03:41 pilot3.tar.gz
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 02:28:37] -rwx------. 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas       100 Nov 26 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:28:37] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 11:37 run_atlas
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas       105 Nov 26 11:37 job.xml
[2025-11-27 02:28:37] -rw-r--r--. 2 boincer umatlas 412208815 Nov 26 11:37 EVNT.47483658._003096.pool.root.1
[2025-11-27 02:28:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 11:37 start_atlas.sh
[2025-11-27 02:28:37] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 11:37 shared
[2025-11-27 02:28:37] -rw-r--r--. 2 boincer umatlas    611284 Nov 26 11:37 input.tar.gz
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas         0 Nov 26 11:37 boinc_lockfile
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 11:38 pandaJob.out
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas        57 Nov 26 11:38 setup.sh.local
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas    991545 Nov 26 11:38 agis_schedconf.cvmfs.json
[2025-11-27 02:28:37] drwx------. 7 boincer umatlas      4096 Nov 26 11:38 pilot3
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas       533 Nov 27 02:08 boinc_task_state.xml
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas      6884 Nov 27 02:21 init_data.xml
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas 921721815 Nov 27 02:26 HITS.47556173._000790.pool.root.1
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas      1060 Nov 27 02:26 memory_monitor_summary.json
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:27 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas   2031578 Nov 27 02:27 log.47556173._000790.job.log.tgz.1
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas      8634 Nov 27 02:27 heartbeat.json
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas        95 Nov 27 02:28 pilot_heartbeat.json
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:28 wrapper_checkpoint.txt
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:28 boinc_mmap_file
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas      4824 Nov 27 02:28 pilotlog.txt
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas   6480116 Nov 27 02:28 log.47556173._000790.job.log.1
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas       353 Nov 27 02:28 output.list
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:28 runtime_log
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas   8529920 Nov 27 02:28 result.tar.gz
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas       660 Nov 27 02:28 UVuLDm1VBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5VJKDmnCWOAn.diag
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 02:28 runtime_log.err
[2025-11-27 02:28:37] -rw-r--r--. 1 boincer umatlas     21157 Nov 27 02:28 stderr.txt
[2025-11-27 02:28:37] HITS file was successfully produced:
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas 921721815 Nov 27 02:26 shared/HITS.pool.root.1
[2025-11-27 02:28:37]  *** Contents of shared directory: ***
[2025-11-27 02:28:37] total 1311624
[2025-11-27 02:28:37] -rw-r--r--. 2 boincer umatlas 412208815 Nov 26 11:37 ATLAS.root_0
[2025-11-27 02:28:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 11:37 start_atlas.sh
[2025-11-27 02:28:37] -rw-r--r--. 2 boincer umatlas    611284 Nov 26 11:37 input.tar.gz
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas 921721815 Nov 27 02:26 HITS.pool.root.1
[2025-11-27 02:28:37] -rw-------. 1 boincer umatlas   8529920 Nov 27 02:28 result.tar.gz
02:28:38 (1951876): run_atlas exited; CPU time 252389.338473
02:28:38 (1951876): called boinc_finish(0)

</stderr_txt>
]]>

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