Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:50:57 (2975): wrapper (7.7.26015): starting
16:50:57 (2975): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 16:50:57] Arguments: --nthreads 3
[2025-11-26 16:50:57] Threads: 3
[2025-11-26 16:50:57] Checking for CVMFS
[2025-11-26 16:50:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:50:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:50:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:50:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:50:58] 2.9.2.0 2830 1 29164 153326 2 1 26267506 36864001 0 130560 0 0 0.000 1291 9156 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 16:50:58] CVMFS is ok
[2025-11-26 16:50:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:50:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:50:58] Further information can be found at the LHC@home message board.
[2025-11-26 16:50:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:50:58] Checking for apptainer binary...
[2025-11-26 16:50:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:50:58] Running /usr/bin/apptainer --version
[2025-11-26 16:50:58] apptainer version 1.4.1-1.1
[2025-11-26 16:50:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:50:59] belleA253e
[2025-11-26 16:50:59] apptainer works
[2025-11-26 16:50:59] Set ATHENA_PROC_NUMBER=3
[2025-11-26 16:50:59] Set ATHENA_CORE_NUMBER=3
[2025-11-26 16:50:59] Starting ATLAS job with PandaID=6897394723
[2025-11-26 16:50:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:48:07]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:48:07] 2025-11-27 00:47:10,513 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:48:07] 2025-11-27 00:47:10,516 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:48:07] 2025-11-27 00:47:10,517 | INFO     | sum of square deviations: 45384620248.0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,519 | INFO     | sum of deviations: 335064587063.0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,519 | INFO     | mean x: 1764188362.0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,519 | INFO     | mean y: 2195325.290322581
[2025-11-27 01:48:07] 2025-11-27 00:47:10,519 | INFO     | intersect: -13022416135.261219
[2025-11-27 01:48:07] 2025-11-27 00:47:10,520 | INFO     | chi2: 6.210626744673026
[2025-11-27 01:48:07] 2025-11-27 00:47:10,520 | INFO     | sum of square deviations: 44105052070.5
[2025-11-27 01:48:07] 2025-11-27 00:47:10,522 | INFO     | sum of deviations: 423856940443.50006
[2025-11-27 01:48:07] 2025-11-27 00:47:10,522 | INFO     | mean x: 1764188209.5
[2025-11-27 01:48:07] 2025-11-27 00:47:10,522 | INFO     | mean y: 2205877.254789272
[2025-11-27 01:48:07] 2025-11-27 00:47:10,523 | INFO     | intersect: -16951938415.55546
[2025-11-27 01:48:07] 2025-11-27 00:47:10,523 | INFO     | chi2: 4.434739161132443
[2025-11-27 01:48:07] 2025-11-27 00:47:10,523 | INFO     | current chi2=4.434739161132443 (change=28.594337682002802 %)
[2025-11-27 01:48:07] 2025-11-27 00:47:10,523 | INFO     | sum of square deviations: 42849763418.0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,525 | INFO     | sum of deviations: 422304125998.99994
[2025-11-27 01:48:07] 2025-11-27 00:47:10,526 | INFO     | mean x: 1764188057.0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,526 | INFO     | mean y: 2205685.765957447
[2025-11-27 01:48:07] 2025-11-27 00:47:10,526 | INFO     | intersect: -17384679003.457203
[2025-11-27 01:48:07] 2025-11-27 00:47:10,526 | INFO     | chi2: 4.420047735540852
[2025-11-27 01:48:07] 2025-11-27 00:47:10,526 | INFO     | current chi2=4.420047735540852 (change=0.33128048928676446 %)
[2025-11-27 01:48:07] 2025-11-27 00:47:10,526 | INFO     | right removable region: 516
[2025-11-27 01:48:07] 2025-11-27 00:47:10,526 | INFO     | sum of square deviations: 44105052070.5
[2025-11-27 01:48:07] 2025-11-27 00:47:10,529 | INFO     | sum of deviations: 213660482886.99997
[2025-11-27 01:48:07] 2025-11-27 00:47:10,529 | INFO     | mean x: 1764188514.5
[2025-11-27 01:48:07] 2025-11-27 00:47:10,529 | INFO     | mean y: 2209781.4137931033
[2025-11-27 01:48:07] 2025-11-27 00:47:10,529 | INFO     | intersect: -8544143804.321718
[2025-11-27 01:48:07] 2025-11-27 00:47:10,529 | INFO     | chi2: 3.7139928448055333
[2025-11-27 01:48:07] 2025-11-27 00:47:10,529 | INFO     | current chi2=3.7139928448055333 (change=40.199387316407375 %)
[2025-11-27 01:48:07] 2025-11-27 00:47:10,529 | INFO     | sum of square deviations: 42849763418.0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,532 | INFO     | sum of deviations: 118879493820.99995
[2025-11-27 01:48:07] 2025-11-27 00:47:10,532 | INFO     | mean x: 1764188667.0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,532 | INFO     | mean y: 2221292.7427466153
[2025-11-27 01:48:07] 2025-11-27 00:47:10,532 | INFO     | intersect: -4892224767.363261
[2025-11-27 01:48:07] 2025-11-27 00:47:10,532 | INFO     | chi2: 2.314918126909262
[2025-11-27 01:48:07] 2025-11-27 00:47:10,532 | INFO     | current chi2=2.314918126909262 (change=37.6703665396945 %)
[2025-11-27 01:48:07] 2025-11-27 00:47:10,532 | INFO     | sum of square deviations: 41618521728.0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,535 | INFO     | sum of deviations: 73343210371.0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,535 | INFO     | mean x: 1764188819.5
[2025-11-27 01:48:07] 2025-11-27 00:47:10,535 | INFO     | mean y: 2226913.97265625
[2025-11-27 01:48:07] 2025-11-27 00:47:10,535 | INFO     | intersect: -3106755970.3401985
[2025-11-27 01:48:07] 2025-11-27 00:47:10,535 | INFO     | chi2: 1.8819790615375878
[2025-11-27 01:48:07] 2025-11-27 00:47:10,535 | INFO     | current chi2=1.8819790615375878 (change=18.702132932438005 %)
[2025-11-27 01:48:07] 2025-11-27 00:47:10,535 | INFO     | left removable region: 30
[2025-11-27 01:48:07] 2025-11-27 00:47:10,535 | INFO     | sum of square deviations: 35594704597.5
[2025-11-27 01:48:07] 2025-11-27 00:47:10,537 | INFO     | sum of deviations: 138699900582.0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,537 | INFO     | mean x: 1764188941.5
[2025-11-27 01:48:07] 2025-11-27 00:47:10,537 | INFO     | mean y: 2241373.880658436
[2025-11-27 01:48:07] 2025-11-27 00:47:10,537 | INFO     | intersect: -6872175300.196752
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | chi2: 0.06491994895946412
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | current memory leak: 3.90 B/s (using 486 data points, chi2=0.06)
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | could have reported an average CPU frequency of 4289 MHz (21 samples)
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | ..............................
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | . Timing measurements:
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | . get job = 0 s
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | . initial setup = 1 s
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | . payload setup = 25 s
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | . stage-in = 0 s
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | . payload execution = 32103 s
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | . stage-out = 1 s
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | . log creation = 0 s
[2025-11-27 01:48:07] 2025-11-27 00:47:10,538 | INFO     | ..............................
[2025-11-27 01:48:07] 2025-11-27 00:47:10,568 | INFO     | 
[2025-11-27 01:48:07] 2025-11-27 00:47:10,568 | INFO     | job summary report
[2025-11-27 01:48:07] 2025-11-27 00:47:10,568 | INFO     | --------------------------------------------------
[2025-11-27 01:48:07] 2025-11-27 00:47:10,568 | INFO     | PanDA job id: 6897394723
[2025-11-27 01:48:07] 2025-11-27 00:47:10,568 | INFO     | task id: 47556161
[2025-11-27 01:48:07] 2025-11-27 00:47:10,568 | INFO     | errors: (none)
[2025-11-27 01:48:07] 2025-11-27 00:47:10,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:48:07] 2025-11-27 00:47:10,568 | INFO     | pilot state: finished 
[2025-11-27 01:48:07] 2025-11-27 00:47:10,568 | INFO     | transexitcode: 0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,568 | INFO     | exeerrorcode: 0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | exeerrordiag: 
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | exitcode: 0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | exitmsg: OK
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | cpuconsumptiontime: 93458 s
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | nevents: 1000
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | neventsw: 0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | pid: 13488
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | pgrp: 13488
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | corecount: 3
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | event service: False
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | sizes: {0: 2284268, 2: 2284530, 11: 2284558, 32132: 2324937, 32135: 2333993, 32141: 2334183}
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | --------------------------------------------------
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | 
[2025-11-27 01:48:07] 2025-11-27 00:47:10,569 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 01:48:07] 2025-11-27 00:47:10,580 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | job 6897394723 has completed (purged errors)
[2025-11-27 01:48:07] 2025-11-27 00:47:10,581 | INFO     | overall cleanup function is called
[2025-11-27 01:48:07] 2025-11-27 00:47:11,589 | INFO     | --- collectZombieJob: --- 10, [13488]
[2025-11-27 01:48:07] 2025-11-27 00:47:11,589 | INFO     | zombie collector waiting for pid 13488
[2025-11-27 01:48:07] 2025-11-27 00:47:11,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:48:07] 2025-11-27 00:47:11,590 | INFO     | collected zombie processes
[2025-11-27 01:48:07] 2025-11-27 00:47:11,590 | INFO     | will attempt to kill all subprocesses of pid=13488
[2025-11-27 01:48:07] 2025-11-27 00:47:11,625 | INFO     | process IDs to be killed: [13488] (in reverse order)
[2025-11-27 01:48:07] 2025-11-27 00:47:11,648 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:48:07] 2025-11-27 00:47:11,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:48:07] 2025-11-27 00:47:11,649 | INFO     | did not find any defunct processes belonging to 13488
[2025-11-27 01:48:07] 2025-11-27 00:47:11,650 | INFO     | did not find any defunct processes belonging to 13488
[2025-11-27 01:48:07] 2025-11-27 00:47:11,651 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:48:07] 2025-11-27 00:47:11,651 | INFO     | ready for new job
[2025-11-27 01:48:07] 2025-11-27 00:47:11,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:48:07] 2025-11-27 00:47:11,652 | INFO     | ***************************************
[2025-11-27 01:48:07] 2025-11-27 00:47:11,652 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:48:07] 2025-11-27 00:47:11,652 | INFO     | ***************************************
[2025-11-27 01:48:07] 2025-11-27 00:47:11,652 | INFO     | 
[2025-11-27 01:48:07] 2025-11-27 00:47:11,652 | INFO     | architecture information:
[2025-11-27 01:48:07] 2025-11-27 00:47:11,653 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:48:07] 2025-11-27 00:47:11,662 | INFO     | cat /etc/os-release:
[2025-11-27 01:48:07] NAME="CentOS Linux"
[2025-11-27 01:48:07] VERSION="7 (Core)"
[2025-11-27 01:48:07] ID="centos"
[2025-11-27 01:48:07] ID_LIKE="rhel fedora"
[2025-11-27 01:48:07] VERSION_ID="7"
[2025-11-27 01:48:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:48:07] ANSI_COLOR="0;31"
[2025-11-27 01:48:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:48:07] HOME_URL="https://www.centos.org/"
[2025-11-27 01:48:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:48:07] 
[2025-11-27 01:48:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:48:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:48:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:48:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:48:07] 
[2025-11-27 01:48:07] 2025-11-27 00:47:11,662 | INFO     | ***************************************
[2025-11-27 01:48:07] 2025-11-27 00:47:12,165 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 01:48:07] 2025-11-27 00:47:12,178 | INFO     | sufficient remaining disk space (331111989248 B)
[2025-11-27 01:48:07] 2025-11-27 00:47:12,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:48:07] 2025-11-27 00:47:12,178 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:48:07] 2025-11-27 00:47:12,178 | INFO     | update_server=False
[2025-11-27 01:48:07] 2025-11-27 00:47:12,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:48:07] 2025-11-27 00:47:12,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:48:07] 2025-11-27 00:47:12,454 | INFO     | all payload control threads have been joined
[2025-11-27 01:48:07] 2025-11-27 00:47:12,569 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 01:48:07] 2025-11-27 00:47:12,569 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 01:48:07] 2025-11-27 00:47:12,569 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:48:07] 2025-11-27 00:47:12,570 | INFO     | will abort loop
[2025-11-27 01:48:07] 2025-11-27 00:47:12,659 | INFO     | all data control threads have been joined
[2025-11-27 01:48:07] 2025-11-27 00:47:12,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:48:07] 2025-11-27 00:47:13,184 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:13,184 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:13,274 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:13,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:13,460 | INFO     | [payload] control thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:13,485 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:13,576 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:13,665 | INFO     | [data] control thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:13,698 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:13,781 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:13,881 | INFO     | all job control threads have been joined
[2025-11-27 01:48:07] 2025-11-27 00:47:13,935 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:14,401 | INFO     | [job] validate thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:14,544 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:14,784 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:14,887 | INFO     | [job] control thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:15,305 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:48:07] 2025-11-27 00:47:19,312 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:48:07] 2025-11-27 00:47:41,850 | INFO     | PID=7039 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 01:48:07] 2025-11-27 00:47:41,850 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:48:07] 2025-11-27 00:47:41,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:48:07] 2025-11-27 00:47:41,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:48:07] 2025-11-27 00:48:01,766 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:48:07] 2025-11-27 00:48:02,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140446157768512)>', '<ExcThread(monitor, started 140445648656128)>']
[2025-11-27 01:48:07] 2025-11-27 00:48:02,956 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:48:07] 2025-11-27 00:48:02,956 | INFO     | [monitor] control thread has ended
[2025-11-27 01:48:07] 2025-11-27 00:48:07,040 | INFO     | all workflow threads have been joined
[2025-11-27 01:48:07] 2025-11-27 00:48:07,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:48:07] 2025-11-27 00:48:07,041 | INFO     | traces error code: 0
[2025-11-27 01:48:07] 2025-11-27 00:48:07,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:48:07] 2025-11-27 00:48:07,090 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:48:07] 2025-11-27 00:48:07,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:48:07] 2025-11-27 00:48:07,095 [wrapper] pilotpid: 7039
[2025-11-27 01:48:07] 2025-11-27 00:48:07,098 [wrapper] Pilot exit status: 0
[2025-11-27 01:48:07] 2025-11-27 00:48:07,105 [wrapper] pandaids: 6897394723
[2025-11-27 01:48:07] 2025-11-27 00:48:07,121 [wrapper] cleanup supervisor_pilot   69132 7040
[2025-11-27 01:48:07] 2025-11-27 00:48:07,124 [wrapper] Test setup, not cleaning
[2025-11-27 01:48:07] 2025-11-27 00:48:07,126 [wrapper] apfmon messages muted
[2025-11-27 01:48:07] 2025-11-27 00:48:07,129 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:48:07] 2025-11-27 00:48:07,132 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:48:07]  *** Error codes and diagnostics ***
[2025-11-27 01:48:07]     "exeErrorCode": 0,
[2025-11-27 01:48:07]     "exeErrorDiag": "",
[2025-11-27 01:48:07]     "pilotErrorCode": 0,
[2025-11-27 01:48:07]     "pilotErrorDiag": "",
[2025-11-27 01:48:07]  *** Listing of results directory ***
[2025-11-27 01:48:07] total 1319924
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc      5112 Nov 25 17:55 queuedata.json
[2025-11-27 01:48:07] -rwx------ 1 boinc boinc     36292 Nov 25 17:56 runpilot2-wrapper.sh
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc       100 Nov 26 16:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:48:07] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 16:50 run_atlas
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc       105 Nov 26 16:50 job.xml
[2025-11-27 01:48:07] -rw-r--r-- 2 boinc boinc 412418440 Nov 26 16:50 EVNT.47483658._002235.pool.root.1
[2025-11-27 01:48:07] drwxrwx--x 2 boinc boinc      4096 Nov 26 16:50 shared
[2025-11-27 01:48:07] -rw-r--r-- 2 boinc boinc    590107 Nov 26 16:50 input.tar.gz
[2025-11-27 01:48:07] -rw-r--r-- 2 boinc boinc     15847 Nov 26 16:50 start_atlas.sh
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc         0 Nov 26 16:50 boinc_setup_complete
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc      6198 Nov 26 16:50 init_data.xml
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc         0 Nov 26 16:50 boinc_lockfile
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc      2786 Nov 26 16:50 pandaJob.out
[2025-11-27 01:48:07] -rw------- 1 boinc boinc    991855 Nov 26 16:51 agis_schedconf.cvmfs.json
[2025-11-27 01:48:07] drwx------ 5 boinc boinc      4096 Nov 26 16:51 pilot3
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc       531 Nov 27 01:41 boinc_task_state.xml
[2025-11-27 01:48:07] -rw------- 1 boinc boinc 923807794 Nov 27 01:46 HITS.47556161._002182.pool.root.1
[2025-11-27 01:48:07] -rw------- 1 boinc boinc        95 Nov 27 01:46 pilot_heartbeat.json
[2025-11-27 01:48:07] -rw------- 1 boinc boinc      1023 Nov 27 01:46 memory_monitor_summary.json
[2025-11-27 01:48:07] -rw------- 1 boinc boinc   1516240 Nov 27 01:47 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:48:07] -rw------- 1 boinc boinc   1210303 Nov 27 01:47 log.47556161._002182.job.log.tgz.1
[2025-11-27 01:48:07] -rw------- 1 boinc boinc      8576 Nov 27 01:47 heartbeat.json
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc      8192 Nov 27 01:47 boinc_mmap_file
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc        28 Nov 27 01:47 wrapper_checkpoint.txt
[2025-11-27 01:48:07] -rw------- 1 boinc boinc      4935 Nov 27 01:48 pilotlog.txt
[2025-11-27 01:48:07] -rw------- 1 boinc boinc   4516398 Nov 27 01:48 log.47556161._002182.job.log.1
[2025-11-27 01:48:07] -rw------- 1 boinc boinc       353 Nov 27 01:48 output.list
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc       620 Nov 27 01:48 runtime_log
[2025-11-27 01:48:07] -rw------- 1 boinc boinc   5744640 Nov 27 01:48 result.tar.gz
[2025-11-27 01:48:07] -rw------- 1 boinc boinc       669 Nov 27 01:48 ixmNDmnVBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSVJKDmxzXHYn.diag
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc      8918 Nov 27 01:48 runtime_log.err
[2025-11-27 01:48:07] -rw-r--r-- 1 boinc boinc     20982 Nov 27 01:48 stderr.txt
[2025-11-27 01:48:07] HITS file was successfully produced:
[2025-11-27 01:48:07] -rw------- 1 boinc boinc 923807794 Nov 27 01:46 shared/HITS.pool.root.1
[2025-11-27 01:48:07]  *** Contents of shared directory: ***
[2025-11-27 01:48:07] total 1311132
[2025-11-27 01:48:07] -rw-r--r-- 2 boinc boinc 412418440 Nov 26 16:50 ATLAS.root_0
[2025-11-27 01:48:07] -rw-r--r-- 2 boinc boinc    590107 Nov 26 16:50 input.tar.gz
[2025-11-27 01:48:07] -rw-r--r-- 2 boinc boinc     15847 Nov 26 16:50 start_atlas.sh
[2025-11-27 01:48:07] -rw------- 1 boinc boinc 923807794 Nov 27 01:46 HITS.pool.root.1
[2025-11-27 01:48:07] -rw------- 1 boinc boinc   5744640 Nov 27 01:48 result.tar.gz
01:48:08 (2975): run_atlas exited; CPU time 93542.580034
01:48:08 (2975): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN