Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:49:59 (3072697): wrapper (7.7.26015): starting
09:49:59 (3072697): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 09:49:59] Arguments: --nthreads 8
[2025-11-26 09:49:59] Threads: 8
[2025-11-26 09:49:59] Checking for CVMFS
[2025-11-26 09:49:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:50:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:50:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:50:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:50:01] 2.13.3.0 1933508 27394 322128 153324 2 504 29391284 32503808 51215 16776704 0 164960458 99.533 192046567 37994 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 09:50:01] CVMFS is ok
[2025-11-26 09:50:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:50:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:50:01] Further information can be found at the LHC@home message board.
[2025-11-26 09:50:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:50:01] Checking for apptainer binary...
[2025-11-26 09:50:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:50:01] Running /usr/bin/apptainer --version
[2025-11-26 09:50:01] apptainer version 1.4.4-1.el9
[2025-11-26 09:50:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:50:02] c7-3-16.aglt2.org
[2025-11-26 09:50:02] apptainer works
[2025-11-26 09:50:03] Set ATHENA_PROC_NUMBER=8
[2025-11-26 09:50:03] Set ATHENA_CORE_NUMBER=8
[2025-11-26 09:50:03] Starting ATLAS job with PandaID=6897998633
[2025-11-26 09:50:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:40:12 (3072697): BOINC client no longer exists - exiting
16:40:12 (3072697): timer handler: client dead, exiting
16:49:06 (3068088): wrapper (7.7.26015): starting
16:49:06 (3068088): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 16:49:06] Arguments: --nthreads 10
[2025-11-26 16:49:06] Threads: 10
[2025-11-26 16:49:06] This job has been restarted, cleaning up previous attempt
[2025-11-26 16:49:06] Checking for CVMFS
[2025-11-26 16:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:49:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:49:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:49:06] 2.13.3.0 1933508 27813 341072 153335 0 686 31997761 32503808 53695 16776704 0 172343949 99.540 197399577 37666 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:49:06] CVMFS is ok
[2025-11-26 16:49:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:49:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:49:06] Further information can be found at the LHC@home message board.
[2025-11-26 16:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:49:06] Checking for apptainer binary...
[2025-11-26 16:49:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:49:06] Running /usr/bin/apptainer --version
[2025-11-26 16:49:06] apptainer version 1.4.4-1.el9
[2025-11-26 16:49:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:49:07] c7-3-16.aglt2.org
[2025-11-26 16:49:07] apptainer works
[2025-11-26 16:49:07] Set ATHENA_PROC_NUMBER=10
[2025-11-26 16:49:07] Set ATHENA_CORE_NUMBER=10
[2025-11-26 16:49:07] Starting ATLAS job with PandaID=6897998633
[2025-11-26 16:49:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:20:20 (3068088): BOINC client no longer exists - exiting
18:20:20 (3068088): timer handler: client dead, exiting
18:29:53 (66968): wrapper (7.7.26015): starting
18:29:53 (66968): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 18:29:53] Arguments: --nthreads 10
[2025-11-26 18:29:53] Threads: 10
[2025-11-26 18:29:53] This job has been restarted, cleaning up previous attempt
[2025-11-26 18:29:53] Checking for CVMFS
[2025-11-26 18:29:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:29:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:29:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:29:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:29:53] 2.13.3.0 1933508 27913 319320 153340 0 165 31198774 32503808 54071 16776704 0 175435891 99.537 202278147 37380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:29:53] CVMFS is ok
[2025-11-26 18:29:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:29:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:29:53] Further information can be found at the LHC@home message board.
[2025-11-26 18:29:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:29:53] Checking for apptainer binary...
[2025-11-26 18:29:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:29:53] Running /usr/bin/apptainer --version
[2025-11-26 18:29:53] apptainer version 1.4.4-1.el9
[2025-11-26 18:29:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:29:53] c7-3-16.aglt2.org
[2025-11-26 18:29:53] apptainer works
[2025-11-26 18:29:53] Set ATHENA_PROC_NUMBER=10
[2025-11-26 18:29:53] Set ATHENA_CORE_NUMBER=10
[2025-11-26 18:29:53] Starting ATLAS job with PandaID=6897998633
[2025-11-26 18:29:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:29:57]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:29:57] 2025-11-27 22:29:22,237 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:29:57] 2025-11-27 22:29:22,237 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:29:57] 2025-11-27 22:29:22,254 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:29:57] 2025-11-27 22:29:22,257 | INFO     | sum of square deviations: 773131789461.2128
[2025-11-27 17:29:57] 2025-11-27 22:29:22,359 | INFO     | sum of deviations: 3627506334075.963
[2025-11-27 17:29:57] 2025-11-27 22:29:22,360 | INFO     | mean x: 1764241158.3620944
[2025-11-27 17:29:57] 2025-11-27 22:29:22,360 | INFO     | mean y: 3221033.5907079647
[2025-11-27 17:29:57] 2025-11-27 22:29:22,360 | INFO     | intersect: -8274534536.718929
[2025-11-27 17:29:57] 2025-11-27 22:29:22,365 | INFO     | chi2: 8.567522211084684
[2025-11-27 17:29:57] 2025-11-27 22:29:22,366 | INFO     | sum of square deviations: 764611223447.4813
[2025-11-27 17:29:57] 2025-11-27 22:29:22,440 | INFO     | sum of deviations: 4145972192129.2036
[2025-11-27 17:29:57] 2025-11-27 22:29:22,441 | INFO     | mean x: 1764241005.865285
[2025-11-27 17:29:57] 2025-11-27 22:29:22,441 | INFO     | mean y: 3230313.863804589
[2025-11-27 17:29:57] 2025-11-27 22:29:22,441 | INFO     | intersect: -9563061582.2346
[2025-11-27 17:29:57] 2025-11-27 22:29:22,442 | INFO     | chi2: 5.298981326415914
[2025-11-27 17:29:57] 2025-11-27 22:29:22,442 | INFO     | current chi2=5.298981326415914 (change=38.15036371239193 %)
[2025-11-27 17:29:57] 2025-11-27 22:29:22,443 | INFO     | sum of square deviations: 756153495821.2236
[2025-11-27 17:29:57] 2025-11-27 22:29:22,553 | INFO     | sum of deviations: 4562568714957.101
[2025-11-27 17:29:57] 2025-11-27 22:29:22,553 | INFO     | mean x: 1764240853.3684993
[2025-11-27 17:29:57] 2025-11-27 22:29:22,553 | INFO     | mean y: 3237820.91307578
[2025-11-27 17:29:57] 2025-11-27 22:29:22,553 | INFO     | intersect: -10642048047.25073
[2025-11-27 17:29:57] 2025-11-27 22:29:22,554 | INFO     | chi2: 2.950614570023267
[2025-11-27 17:29:57] 2025-11-27 22:29:22,554 | INFO     | current chi2=2.950614570023267 (change=44.317324627769885 %)
[2025-11-27 17:29:57] 2025-11-27 22:29:22,555 | INFO     | sum of square deviations: 747758374019.9396
[2025-11-27 17:29:57] 2025-11-27 22:29:22,799 | INFO     | sum of deviations: 4802269620411.891
[2025-11-27 17:29:57] 2025-11-27 22:29:22,799 | INFO     | mean x: 1764240700.8717375
[2025-11-27 17:29:57] 2025-11-27 22:29:22,799 | INFO     | mean y: 3242173.947054437
[2025-11-27 17:29:57] 2025-11-27 22:29:22,799 | INFO     | intersect: -11327101711.529251
[2025-11-27 17:29:57] 2025-11-27 22:29:22,800 | INFO     | chi2: 2.1039412172921894
[2025-11-27 17:29:57] 2025-11-27 22:29:22,801 | INFO     | current chi2=2.1039412172921894 (change=28.69481366129095 %)
[2025-11-27 17:29:57] 2025-11-27 22:29:22,802 | INFO     | sum of square deviations: 739425543558.8751
[2025-11-27 17:29:57] 2025-11-27 22:29:22,875 | INFO     | sum of deviations: 4864257277033.395
[2025-11-27 17:29:57] 2025-11-27 22:29:22,875 | INFO     | mean x: 1764240548.3742516
[2025-11-27 17:29:57] 2025-11-27 22:29:22,875 | INFO     | mean y: 3243307.017215569
[2025-11-27 17:29:57] 2025-11-27 22:29:22,875 | INFO     | intersect: -11602685106.76572
[2025-11-27 17:29:57] 2025-11-27 22:29:22,876 | INFO     | chi2: 1.959878885738599
[2025-11-27 17:29:57] 2025-11-27 22:29:22,876 | INFO     | current chi2=1.959878885738599 (change=6.8472602927091915 %)
[2025-11-27 17:29:57] 2025-11-27 22:29:22,876 | INFO     | right removable region: 1335
[2025-11-27 17:29:57] 2025-11-27 22:29:22,878 | INFO     | sum of square deviations: 764610675668.9397
[2025-11-27 17:29:57] 2025-11-27 22:29:22,918 | INFO     | sum of deviations: 3298746044335.4634
[2025-11-27 17:29:57] 2025-11-27 22:29:22,918 | INFO     | mean x: 1764241310.8638046
[2025-11-27 17:29:57] 2025-11-27 22:29:22,938 | INFO     | mean y: 3226910.3449296816
[2025-11-27 17:29:57] 2025-11-27 22:29:22,939 | INFO     | intersect: -7608207549.909758
[2025-11-27 17:29:57] 2025-11-27 22:29:22,940 | INFO     | chi2: 6.988582914936595
[2025-11-27 17:29:57] 2025-11-27 22:29:22,940 | INFO     | current chi2=6.988582914936595 (change=18.429357488040747 %)
[2025-11-27 17:29:57] 2025-11-27 22:29:22,940 | INFO     | left removable region: 10
[2025-11-27 17:29:57] 2025-11-27 22:29:22,941 | INFO     | sum of square deviations: 721310966962.9481
[2025-11-27 17:29:57] 2025-11-27 22:29:23,014 | INFO     | sum of deviations: 4403465922196.157
[2025-11-27 17:29:57] 2025-11-27 22:29:23,015 | INFO     | mean x: 1764240822.876981
[2025-11-27 17:29:57] 2025-11-27 22:29:23,015 | INFO     | mean y: 3251982.5592452832
[2025-11-27 17:29:57] 2025-11-27 22:29:23,015 | INFO     | intersect: -10767101856.362982
[2025-11-27 17:29:57] 2025-11-27 22:29:23,016 | INFO     | chi2: 0.25060381384140695
[2025-11-27 17:29:57] 2025-11-27 22:29:23,016 | INFO     | current memory leak: 6.10 B/s (using 1325 data points, chi2=0.25)
[2025-11-27 17:29:57] 2025-11-27 22:29:23,017 | INFO     | could have reported an average CPU frequency of 3294 MHz (49 samples)
[2025-11-27 17:29:57] 2025-11-27 22:29:23,017 | INFO     | ..............................
[2025-11-27 17:29:57] 2025-11-27 22:29:23,017 | INFO     | . Timing measurements:
[2025-11-27 17:29:57] 2025-11-27 22:29:23,017 | INFO     | . get job = 0 s
[2025-11-27 17:29:57] 2025-11-27 22:29:23,017 | INFO     | . initial setup = 0 s
[2025-11-27 17:29:57] 2025-11-27 22:29:23,017 | INFO     | . payload setup = 6 s
[2025-11-27 17:29:57] 2025-11-27 22:29:23,017 | INFO     | . stage-in = 0 s
[2025-11-27 17:29:57] 2025-11-27 22:29:23,017 | INFO     | . payload execution = 82712 s
[2025-11-27 17:29:57] 2025-11-27 22:29:23,017 | INFO     | . stage-out = 4 s
[2025-11-27 17:29:57] 2025-11-27 22:29:23,017 | INFO     | . log creation = 1 s
[2025-11-27 17:29:57] 2025-11-27 22:29:23,018 | INFO     | ..............................
[2025-11-27 17:29:57] 2025-11-27 22:29:23,091 | INFO     | 
[2025-11-27 17:29:57] 2025-11-27 22:29:23,091 | INFO     | job summary report
[2025-11-27 17:29:57] 2025-11-27 22:29:23,091 | INFO     | --------------------------------------------------
[2025-11-27 17:29:57] 2025-11-27 22:29:23,091 | INFO     | PanDA job id: 6897998633
[2025-11-27 17:29:57] 2025-11-27 22:29:23,091 | INFO     | task id: 47556173
[2025-11-27 17:29:57] 2025-11-27 22:29:23,091 | INFO     | errors: (none)
[2025-11-27 17:29:57] 2025-11-27 22:29:23,091 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | pilot state: finished 
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | transexitcode: 0
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | exeerrorcode: 0
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | exeerrordiag: 
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | exitcode: 0
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | exitmsg: OK
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | cpuconsumptiontime: 197230 s
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | nevents: 1000
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | neventsw: 0
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | pid: 141697
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | pgrp: 141697
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | corecount: 10
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | event service: False
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | sizes: {0: 2284264, 5: 2284526, 11: 2284582, 82722: 2348687, 82723: 2348686, 82728: 2357736, 82731: 2357920, 82745: 2358166}
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | --------------------------------------------------
[2025-11-27 17:29:57] 2025-11-27 22:29:23,092 | INFO     | 
[2025-11-27 17:29:57] 2025-11-27 22:29:23,093 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 17:29:57] 2025-11-27 22:29:23,116 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,116 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,116 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,118 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:29:57] 2025-11-27 22:29:23,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,118 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:29:57] 2025-11-27 22:29:23,118 | INFO     | job 6897998633 has completed (purged errors)
[2025-11-27 17:29:57] 2025-11-27 22:29:23,118 | INFO     | overall cleanup function is called
[2025-11-27 17:29:57] 2025-11-27 22:29:24,142 | INFO     | --- collectZombieJob: --- 10, [141697]
[2025-11-27 17:29:57] 2025-11-27 22:29:24,142 | INFO     | zombie collector waiting for pid 141697
[2025-11-27 17:29:57] 2025-11-27 22:29:24,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:29:57] 2025-11-27 22:29:24,143 | INFO     | collected zombie processes
[2025-11-27 17:29:57] 2025-11-27 22:29:24,143 | INFO     | will attempt to kill all subprocesses of pid=141697
[2025-11-27 17:29:57] 2025-11-27 22:29:25,339 | INFO     | process IDs to be killed: [141697] (in reverse order)
[2025-11-27 17:29:57] 2025-11-27 22:29:25,637 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:29:57] 2025-11-27 22:29:25,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:29:57] 2025-11-27 22:29:25,672 | INFO     | did not find any defunct processes belonging to 141697
[2025-11-27 17:29:57] 2025-11-27 22:29:25,707 | INFO     | did not find any defunct processes belonging to 141697
[2025-11-27 17:29:57] 2025-11-27 22:29:25,708 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:29:57] 2025-11-27 22:29:25,709 | INFO     | ready for new job
[2025-11-27 17:29:57] 2025-11-27 22:29:25,709 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:29:57] 2025-11-27 22:29:25,713 | INFO     | ***************************************
[2025-11-27 17:29:57] 2025-11-27 22:29:25,713 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:29:57] 2025-11-27 22:29:25,713 | INFO     | ***************************************
[2025-11-27 17:29:57] 2025-11-27 22:29:25,713 | INFO     | 
[2025-11-27 17:29:57] 2025-11-27 22:29:25,718 | INFO     | architecture information:
[2025-11-27 17:29:57] 2025-11-27 22:29:25,719 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:29:57] 2025-11-27 22:29:25,779 | INFO     | cat /etc/os-release:
[2025-11-27 17:29:57] NAME="CentOS Linux"
[2025-11-27 17:29:57] VERSION="7 (Core)"
[2025-11-27 17:29:57] ID="centos"
[2025-11-27 17:29:57] ID_LIKE="rhel fedora"
[2025-11-27 17:29:57] VERSION_ID="7"
[2025-11-27 17:29:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:29:57] ANSI_COLOR="0;31"
[2025-11-27 17:29:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:29:57] HOME_URL="https://www.centos.org/"
[2025-11-27 17:29:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:29:57] 
[2025-11-27 17:29:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:29:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:29:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:29:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:29:57] 
[2025-11-27 17:29:57] 2025-11-27 22:29:25,780 | INFO     | ***************************************
[2025-11-27 17:29:57] 2025-11-27 22:29:26,283 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 17:29:57] 2025-11-27 22:29:26,323 | INFO     | sufficient remaining disk space (88241864704 B)
[2025-11-27 17:29:57] 2025-11-27 22:29:26,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:29:57] 2025-11-27 22:29:26,324 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:29:57] 2025-11-27 22:29:26,324 | INFO     | update_server=False
[2025-11-27 17:29:57] 2025-11-27 22:29:26,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:29:57] 2025-11-27 22:29:26,458 | INFO     | all job control threads have been joined
[2025-11-27 17:29:57] 2025-11-27 22:29:26,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:29:57] 2025-11-27 22:29:26,662 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:29:57] 2025-11-27 22:29:26,684 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:29:57] 2025-11-27 22:29:26,684 | INFO     | aborting loop
[2025-11-27 17:29:57] 2025-11-27 22:29:27,316 | INFO     | all data control threads have been joined
[2025-11-27 17:29:57] 2025-11-27 22:29:27,335 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:27,437 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:27,464 | INFO     | [job] control thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:27,636 | INFO     | [job] validate thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:27,690 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:27,733 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:27,764 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:27,788 | INFO     | all payload control threads have been joined
[2025-11-27 17:29:57] 2025-11-27 22:29:28,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:29:57] 2025-11-27 22:29:28,322 | INFO     | [data] control thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:28,359 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:28,545 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:28,649 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:28,682 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:28,683 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:28,794 | INFO     | [payload] control thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:29,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:29:57] 2025-11-27 22:29:29,110 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:33,075 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:29:57] 2025-11-27 22:29:35,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801437108032)>', '<ExcThread(monitor, started 139800942192384)>']
[2025-11-27 17:29:57] 2025-11-27 22:29:40,163 | INFO     | all workflow threads have been joined
[2025-11-27 17:29:57] 2025-11-27 22:29:40,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:29:57] 2025-11-27 22:29:40,164 | INFO     | traces error code: 0
[2025-11-27 17:29:57] 2025-11-27 22:29:40,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:29:57] 2025-11-27 22:29:56,734 | INFO     | PID=93341 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 17:29:57] 2025-11-27 22:29:56,735 | INFO     | .. there are 94 such processes running
[2025-11-27 17:29:57] 2025-11-27 22:29:56,735 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:29:57] 2025-11-27 22:29:56,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:29:57] 2025-11-27 22:29:56,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:29:57] 2025-11-27 22:29:56,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:29:57] 2025-11-27 22:29:56,736 | INFO     | [monitor] control thread has ended
[2025-11-27 17:29:57] 2025-11-27 22:29:57,371 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:29:57] 2025-11-27 22:29:57,404 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:29:57] 2025-11-27 22:29:57,420 [wrapper] pilotpid: 93341
[2025-11-27 17:29:57] 2025-11-27 22:29:57,429 [wrapper] Pilot exit status: 0
[2025-11-27 17:29:57] 2025-11-27 22:29:57,440 [wrapper] pandaids: 6897998633 6897998633 6897998633
[2025-11-27 17:29:57] 2025-11-27 22:29:57,619 [wrapper] cleanup supervisor_pilot 2776600 93342
[2025-11-27 17:29:57] 2025-11-27 22:29:57,643 [wrapper] Test setup, not cleaning
[2025-11-27 17:29:57] 2025-11-27 22:29:57,649 [wrapper] apfmon messages muted
[2025-11-27 17:29:57] 2025-11-27 22:29:57,673 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:29:57] 2025-11-27 22:29:57,690 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:29:57]  *** Error codes and diagnostics ***
[2025-11-27 17:29:57]     "exeErrorCode": 0,
[2025-11-27 17:29:57]     "exeErrorDiag": "",
[2025-11-27 17:29:57]     "pilotErrorCode": 0,
[2025-11-27 17:29:57]     "pilotErrorDiag": "",
[2025-11-27 17:29:57]  *** Listing of results directory ***
[2025-11-27 17:29:57] total 1724000
[2025-11-27 17:29:57] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:21 queuedata.json
[2025-11-27 17:29:57] -rwx------. 1 boincer umatlas     36292 Nov 25 21:23 runpilot2-wrapper.sh
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas       100 Nov 26 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:29:57] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 09:49 run_atlas
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas       105 Nov 26 09:49 job.xml
[2025-11-27 17:29:57] -rw-r--r--. 3 boincer umatlas 409041788 Nov 26 09:49 EVNT.47483658._003149.pool.root.1
[2025-11-27 17:29:57] -rw-r--r--. 3 boincer umatlas 409041788 Nov 26 09:49 ATLAS.root_0
[2025-11-27 17:29:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:49 start_atlas.sh
[2025-11-27 17:29:57] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 09:49 shared
[2025-11-27 17:29:57] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 09:49 input.tar.gz
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas         0 Nov 26 09:49 boinc_lockfile
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 18:29 pandaJob.out
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas        57 Nov 26 18:29 setup.sh.local
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas    991538 Nov 26 18:30 agis_schedconf.cvmfs.json
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas       533 Nov 27 17:07 boinc_task_state.xml
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 17:23 init_data.xml
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas 916800807 Nov 27 17:28 HITS.47556173._001060.pool.root.1
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas      1073 Nov 27 17:28 memory_monitor_summary.json
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:29 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas   2626447 Nov 27 17:29 log.47556173._001060.job.log.tgz.1
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas      8627 Nov 27 17:29 heartbeat.json
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas       821 Nov 27 17:29 pilotlog.txt
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas        96 Nov 27 17:29 pilot_heartbeat.json
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:29 wrapper_checkpoint.txt
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:29 boinc_mmap_file
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas  10652744 Nov 27 17:29 log.47556173._001060.job.log.1
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas       353 Nov 27 17:29 output.list
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas       620 Nov 27 17:29 runtime_log
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas  13301760 Nov 27 17:29 result.tar.gz
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas      9425 Nov 27 17:29 runtime_log.err
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas       915 Nov 27 17:29 IvKNDm6MKi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdmJKDm5xGHln.diag
[2025-11-27 17:29:57] -rw-r--r--. 1 boincer umatlas     25693 Nov 27 17:29 stderr.txt
[2025-11-27 17:29:57] HITS file was successfully produced:
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas 916800807 Nov 27 17:28 shared/HITS.pool.root.1
[2025-11-27 17:29:57]  *** Contents of shared directory: ***
[2025-11-27 17:29:57] total 1308368
[2025-11-27 17:29:57] -rw-r--r--. 3 boincer umatlas 409041788 Nov 26 09:49 ATLAS.root_0
[2025-11-27 17:29:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:49 start_atlas.sh
[2025-11-27 17:29:57] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 09:49 input.tar.gz
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas 916800807 Nov 27 17:28 HITS.pool.root.1
[2025-11-27 17:29:57] -rw-------. 1 boincer umatlas  13301760 Nov 27 17:29 result.tar.gz
17:29:59 (66968): run_atlas exited; CPU time 199964.844781
17:29:59 (66968): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN