Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:50:31 (1134743): wrapper (7.7.26015): starting
09:50:31 (1134743): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 09:50:31] Arguments: --nthreads 8
[2025-11-26 09:50:31] Threads: 8
[2025-11-26 09:50:31] Checking for CVMFS
[2025-11-26 09:50:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:50:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:50:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:50:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:50:33] 2.13.3.0 17216 30057 476604 153324 2 736 27509038 32935936 72907 16776704 0 528725790 99.679 417368513 48355 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 09:50:33] CVMFS is ok
[2025-11-26 09:50:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:50:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:50:33] Further information can be found at the LHC@home message board.
[2025-11-26 09:50:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:50:33] Checking for apptainer binary...
[2025-11-26 09:50:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:50:33] Running /usr/bin/apptainer --version
[2025-11-26 09:50:33] apptainer version 1.4.4-1.el9
[2025-11-26 09:50:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:50:34] c7-9-14.aglt2.org
[2025-11-26 09:50:34] apptainer works
[2025-11-26 09:50:34] Set ATHENA_PROC_NUMBER=8
[2025-11-26 09:50:34] Set ATHENA_CORE_NUMBER=8
[2025-11-26 09:50:34] Starting ATLAS job with PandaID=6896713662
[2025-11-26 09:50:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:00:56]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:00:56] 2025-11-26 22:00:17,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:00:56] 2025-11-26 22:00:17,942 | INFO     | time since job start (25707s) is within the limit (172800.0s)
[2025-11-26 17:00:56] 2025-11-26 22:00:19,335 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 17:00:56] 2025-11-26 22:00:19,343 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2847968749998
[2025-11-26 17:00:56] 2025-11-26 22:00:19,374 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6896713662/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:00:56] 2025-11-26 22:00:19,375 | INFO     | extracted standard info from prmon json
[2025-11-26 17:00:56] 2025-11-26 22:00:19,375 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:00:56] 2025-11-26 22:00:19,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:00:56] 2025-11-26 22:00:19,465 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:00:56] 2025-11-26 22:00:19,466 | INFO     | sum of square deviations: 22646218227.619663
[2025-11-26 17:00:56] 2025-11-26 22:00:19,468 | INFO     | sum of deviations: 346254686663.1286
[2025-11-26 17:00:56] 2025-11-26 22:00:19,468 | INFO     | mean x: 1764181592.2464116
[2025-11-26 17:00:56] 2025-11-26 22:00:19,468 | INFO     | mean y: 2766621.086124402
[2025-11-26 17:00:56] 2025-11-26 22:00:19,528 | INFO     | intersect: -26971103289.569923
[2025-11-26 17:00:56] 2025-11-26 22:00:19,529 | INFO     | chi2: 14.621820471087624
[2025-11-26 17:00:56] 2025-11-26 22:00:19,529 | INFO     | sum of square deviations: 21843312282.300137
[2025-11-26 17:00:56] 2025-11-26 22:00:19,531 | INFO     | sum of deviations: 487218231677.31024
[2025-11-26 17:00:56] 2025-11-26 22:00:19,531 | INFO     | mean x: 1764181439.7554479
[2025-11-26 17:00:56] 2025-11-26 22:00:19,531 | INFO     | mean y: 2793403.9733656175
[2025-11-26 17:00:56] 2025-11-26 22:00:19,531 | INFO     | intersect: -39347528119.01634
[2025-11-26 17:00:56] 2025-11-26 22:00:19,532 | INFO     | chi2: 11.117673928598807
[2025-11-26 17:00:56] 2025-11-26 22:00:19,532 | INFO     | current chi2=11.117673928598807 (change=23.96518647878164 %)
[2025-11-26 17:00:56] 2025-11-26 22:00:19,532 | INFO     | right removable region: 412
[2025-11-26 17:00:56] 2025-11-26 22:00:19,532 | INFO     | sum of square deviations: 21843121962.300137
[2025-11-26 17:00:56] 2025-11-26 22:00:19,605 | INFO     | sum of deviations: 185359565969.719
[2025-11-26 17:00:56] 2025-11-26 22:00:19,606 | INFO     | mean x: 1764181744.7554479
[2025-11-26 17:00:56] 2025-11-26 22:00:19,606 | INFO     | mean y: 2797159.6803874094
[2025-11-26 17:00:56] 2025-11-26 22:00:19,606 | INFO     | intersect: -14967954872.193386
[2025-11-26 17:00:56] 2025-11-26 22:00:19,606 | INFO     | chi2: 10.299514421409484
[2025-11-26 17:00:56] 2025-11-26 22:00:19,606 | INFO     | current chi2=10.299514421409484 (change=29.56065599509191 %)
[2025-11-26 17:00:56] 2025-11-26 22:00:19,606 | INFO     | sum of square deviations: 21059235359.411713
[2025-11-26 17:00:56] 2025-11-26 22:00:19,609 | INFO     | sum of deviations: 39739616345.91188
[2025-11-26 17:00:56] 2025-11-26 22:00:19,609 | INFO     | mean x: 1764181897.264706
[2025-11-26 17:00:56] 2025-11-26 22:00:19,609 | INFO     | mean y: 2825466.8897058824
[2025-11-26 17:00:56] 2025-11-26 22:00:19,609 | INFO     | intersect: -3326256076.9171534
[2025-11-26 17:00:56] 2025-11-26 22:00:19,609 | INFO     | chi2: 6.938341986002342
[2025-11-26 17:00:56] 2025-11-26 22:00:19,613 | INFO     | current chi2=6.938341986002342 (change=32.63428058725089 %)
[2025-11-26 17:00:56] 2025-11-26 22:00:19,613 | INFO     | sum of square deviations: 20294400764.07428
[2025-11-26 17:00:56] 2025-11-26 22:00:19,616 | INFO     | sum of deviations: 11108276226.037266
[2025-11-26 17:00:56] 2025-11-26 22:00:19,616 | INFO     | mean x: 1764182049.7667494
[2025-11-26 17:00:56] 2025-11-26 22:00:19,616 | INFO     | mean y: 2831167.8833746896
[2025-11-26 17:00:56] 2025-11-26 22:00:19,616 | INFO     | intersect: -962805696.6707575
[2025-11-26 17:00:56] 2025-11-26 22:00:19,616 | INFO     | chi2: 6.8505916980770065
[2025-11-26 17:00:56] 2025-11-26 22:00:19,616 | INFO     | current chi2=6.8505916980770065 (change=1.264715519966677 %)
[2025-11-26 17:00:56] 2025-11-26 22:00:19,616 | INFO     | left removable region: 30
[2025-11-26 17:00:56] 2025-11-26 22:00:19,617 | INFO     | sum of square deviations: 17284260445.02886
[2025-11-26 17:00:56] 2025-11-26 22:00:19,619 | INFO     | sum of deviations: 131428646796.30878
[2025-11-26 17:00:56] 2025-11-26 22:00:19,619 | INFO     | mean x: 1764182324.2801046
[2025-11-26 17:00:56] 2025-11-26 22:00:19,619 | INFO     | mean y: 2877298.277486911
[2025-11-26 17:00:56] 2025-11-26 22:00:19,619 | INFO     | intersect: -13411876333.763947
[2025-11-26 17:00:56] 2025-11-26 22:00:19,619 | INFO     | chi2: 2.2461070303601463
[2025-11-26 17:00:56] 2025-11-26 22:00:19,619 | INFO     | current memory leak: 7.60 B/s (using 382 data points, chi2=2.25)
[2025-11-26 17:00:56] 2025-11-26 22:00:19,620 | INFO     | could have reported an average CPU frequency of 3799 MHz (17 samples)
[2025-11-26 17:00:56] 2025-11-26 22:00:19,620 | INFO     | ..............................
[2025-11-26 17:00:56] 2025-11-26 22:00:19,620 | INFO     | . Timing measurements:
[2025-11-26 17:00:56] 2025-11-26 22:00:19,620 | INFO     | . get job = 0 s
[2025-11-26 17:00:56] 2025-11-26 22:00:19,620 | INFO     | . initial setup = 5 s
[2025-11-26 17:00:56] 2025-11-26 22:00:19,620 | INFO     | . payload setup = 46 s
[2025-11-26 17:00:56] 2025-11-26 22:00:19,620 | INFO     | . stage-in = 0 s
[2025-11-26 17:00:56] 2025-11-26 22:00:19,620 | INFO     | . payload execution = 25518 s
[2025-11-26 17:00:56] 2025-11-26 22:00:19,620 | INFO     | . stage-out = 5 s
[2025-11-26 17:00:56] 2025-11-26 22:00:19,620 | INFO     | . log creation = 1 s
[2025-11-26 17:00:56] 2025-11-26 22:00:19,620 | INFO     | ..............................
[2025-11-26 17:00:56] 2025-11-26 22:00:19,951 | INFO     | time since job start (25709s) is within the limit (172800.0s)
[2025-11-26 17:00:56] 2025-11-26 22:00:20,167 | INFO     | 
[2025-11-26 17:00:56] 2025-11-26 22:00:20,167 | INFO     | job summary report
[2025-11-26 17:00:56] 2025-11-26 22:00:20,167 | INFO     | --------------------------------------------------
[2025-11-26 17:00:56] 2025-11-26 22:00:20,167 | INFO     | PanDA job id: 6896713662
[2025-11-26 17:00:56] 2025-11-26 22:00:20,167 | INFO     | task id: 47556161
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | errors: (none)
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | pilot state: finished 
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | transexitcode: 0
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | exeerrorcode: 0
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | exeerrordiag: 
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | exitcode: 0
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | exitmsg: OK
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | cpuconsumptiontime: 138543 s
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | nevents: 1000
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | neventsw: 0
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | pid: 1205735
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | pgrp: 1205735
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | corecount: 8
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | event service: False
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | sizes: {0: 2283433, 1: 2284289, 2: 2284289, 12: 2284317, 23: 2284345, 34: 2284373, 38: 2284791, 44: 2284819, 25568: 2320973, 25569: 2320972, 25574: 2330358, 25632:
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | --------------------------------------------------
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | 
[2025-11-26 17:00:56] 2025-11-26 22:00:20,168 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,433 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,433 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:00:56] 2025-11-26 22:00:20,433 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,433 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:00:56] 2025-11-26 22:00:20,433 | INFO     | job 6896713662 has completed (purged errors)
[2025-11-26 17:00:56] 2025-11-26 22:00:20,433 | INFO     | overall cleanup function is called
[2025-11-26 17:00:56] 2025-11-26 22:00:21,478 | INFO     | --- collectZombieJob: --- 10, [1205735]
[2025-11-26 17:00:56] 2025-11-26 22:00:21,478 | INFO     | zombie collector waiting for pid 1205735
[2025-11-26 17:00:56] 2025-11-26 22:00:21,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:00:56] 2025-11-26 22:00:21,478 | INFO     | collected zombie processes
[2025-11-26 17:00:56] 2025-11-26 22:00:21,479 | INFO     | will attempt to kill all subprocesses of pid=1205735
[2025-11-26 17:00:56] 2025-11-26 22:00:23,362 | INFO     | process IDs to be killed: [1205735] (in reverse order)
[2025-11-26 17:00:56] 2025-11-26 22:00:24,169 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:00:56] 2025-11-26 22:00:24,169 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:00:56] 2025-11-26 22:00:24,242 | INFO     | did not find any defunct processes belonging to 1205735
[2025-11-26 17:00:56] 2025-11-26 22:00:24,313 | INFO     | did not find any defunct processes belonging to 1205735
[2025-11-26 17:00:56] 2025-11-26 22:00:24,353 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:00:56] 2025-11-26 22:00:24,353 | INFO     | ready for new job
[2025-11-26 17:00:56] 2025-11-26 22:00:24,354 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:00:56] 2025-11-26 22:00:24,356 | INFO     | ***************************************
[2025-11-26 17:00:56] 2025-11-26 22:00:24,356 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:00:56] 2025-11-26 22:00:24,356 | INFO     | ***************************************
[2025-11-26 17:00:56] 2025-11-26 22:00:24,356 | INFO     | 
[2025-11-26 17:00:56] 2025-11-26 22:00:24,360 | INFO     | architecture information:
[2025-11-26 17:00:56] 2025-11-26 22:00:24,372 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:00:56] 2025-11-26 22:00:24,515 | INFO     | cat /etc/os-release:
[2025-11-26 17:00:56] NAME="CentOS Linux"
[2025-11-26 17:00:56] VERSION="7 (Core)"
[2025-11-26 17:00:56] ID="centos"
[2025-11-26 17:00:56] ID_LIKE="rhel fedora"
[2025-11-26 17:00:56] VERSION_ID="7"
[2025-11-26 17:00:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:00:56] ANSI_COLOR="0;31"
[2025-11-26 17:00:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:00:56] HOME_URL="https://www.centos.org/"
[2025-11-26 17:00:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:00:56] 
[2025-11-26 17:00:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:00:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:00:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:00:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:00:56] 
[2025-11-26 17:00:56] 2025-11-26 22:00:24,515 | INFO     | ***************************************
[2025-11-26 17:00:56] 2025-11-26 22:00:25,018 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-26 17:00:56] 2025-11-26 22:00:25,165 | INFO     | sufficient remaining disk space (59355693056 B)
[2025-11-26 17:00:56] 2025-11-26 22:00:25,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:00:56] 2025-11-26 22:00:25,165 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:00:56] 2025-11-26 22:00:25,165 | INFO     | update_server=False
[2025-11-26 17:00:56] 2025-11-26 22:00:25,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:00:56] 2025-11-26 22:00:25,166 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:00:56] 2025-11-26 22:00:25,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:00:56] 2025-11-26 22:00:25,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:00:56] 2025-11-26 22:00:25,739 | INFO     | aborting loop
[2025-11-26 17:00:56] 2025-11-26 22:00:25,759 | INFO     | all payload control threads have been joined
[2025-11-26 17:00:56] 2025-11-26 22:00:25,873 | INFO     | all data control threads have been joined
[2025-11-26 17:00:56] 2025-11-26 22:00:26,171 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:26,172 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:26,326 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:26,582 | INFO     | all job control threads have been joined
[2025-11-26 17:00:56] 2025-11-26 22:00:26,711 | INFO     | [job] validate thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:26,721 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:26,744 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:26,765 | INFO     | [payload] control thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:26,879 | INFO     | [data] control thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:26,880 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:27,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:00:56] 2025-11-26 22:00:27,016 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:27,017 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:27,303 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:27,407 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:27,590 | INFO     | [job] control thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:27,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:31,020 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:00:56] 2025-11-26 22:00:34,609 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:00:56] 2025-11-26 22:00:35,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269573670720)>', '<ExcThread(monitor, started 140268867155712)>']
[2025-11-26 17:00:56] 2025-11-26 22:00:40,438 | INFO     | all workflow threads have been joined
[2025-11-26 17:00:56] 2025-11-26 22:00:40,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:00:56] 2025-11-26 22:00:40,439 | INFO     | traces error code: 0
[2025-11-26 17:00:56] 2025-11-26 22:00:40,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:00:56] 2025-11-26 22:00:54,170 | INFO     | PID=1168841 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:00:56] 2025-11-26 22:00:54,170 | INFO     | .. there are 104 such processes running
[2025-11-26 17:00:56] 2025-11-26 22:00:54,171 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:00:56] 2025-11-26 22:00:54,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:00:56] 2025-11-26 22:00:54,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:00:56] 2025-11-26 22:00:54,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:00:56] 2025-11-26 22:00:54,171 | INFO     | [monitor] control thread has ended
[2025-11-26 17:00:56] 2025-11-26 22:00:54,514 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:00:56] 2025-11-26 22:00:54,529 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:00:56] 2025-11-26 22:00:54,543 [wrapper] pilotpid: 1168841
[2025-11-26 17:00:56] 2025-11-26 22:00:54,560 [wrapper] Pilot exit status: 0
[2025-11-26 17:00:56] 2025-11-26 22:00:54,664 [wrapper] pandaids: 6896713662
[2025-11-26 17:00:56] 2025-11-26 22:00:54,907 [wrapper] cleanup supervisor_pilot 1979634 1168842
[2025-11-26 17:00:56] 2025-11-26 22:00:54,922 [wrapper] Test setup, not cleaning
[2025-11-26 17:00:56] 2025-11-26 22:00:54,936 [wrapper] apfmon messages muted
[2025-11-26 17:00:56] 2025-11-26 22:00:54,978 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:00:56] 2025-11-26 22:00:54,998 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:00:56]  *** Error codes and diagnostics ***
[2025-11-26 17:00:56]     "exeErrorCode": 0,
[2025-11-26 17:00:56]     "exeErrorDiag": "",
[2025-11-26 17:00:56]     "pilotErrorCode": 0,
[2025-11-26 17:00:56]     "pilotErrorDiag": "",
[2025-11-26 17:00:56]  *** Listing of results directory ***
[2025-11-26 17:00:56] total 1322004
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-26 17:00:56] -rwx------. 1 boincer umatlas     36292 Nov 25 00:30 runpilot2-wrapper.sh
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:30 queuedata.json
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas       100 Nov 26 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:00:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 09:50 run_atlas
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas       105 Nov 26 09:50 job.xml
[2025-11-26 17:00:56] -rw-r--r--. 2 boincer umatlas 411208748 Nov 26 09:50 EVNT.47483658._002105.pool.root.1
[2025-11-26 17:00:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:50 start_atlas.sh
[2025-11-26 17:00:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 09:50 shared
[2025-11-26 17:00:56] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 09:50 input.tar.gz
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas         0 Nov 26 09:50 boinc_lockfile
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas      2783 Nov 26 09:50 pandaJob.out
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas        57 Nov 26 09:50 setup.sh.local
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas    992360 Nov 26 09:51 agis_schedconf.cvmfs.json
[2025-11-26 17:00:56] drwx------. 5 boincer umatlas      4096 Nov 26 09:51 pilot3
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas       532 Nov 26 16:47 boinc_task_state.xml
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas      7171 Nov 26 16:57 init_data.xml
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas 928777444 Nov 26 16:58 HITS.47556161._000888.pool.root.1
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas      1052 Nov 26 16:59 memory_monitor_summary.json
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas   1516240 Nov 26 16:59 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas   1687133 Nov 26 16:59 log.47556161._000888.job.log.tgz.1
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas      8579 Nov 26 17:00 heartbeat.json
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas       824 Nov 26 17:00 pilotlog.txt
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas        95 Nov 26 17:00 pilot_heartbeat.json
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas   3225518 Nov 26 17:00 log.47556161._000888.job.log.1
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas       353 Nov 26 17:00 output.list
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:00 wrapper_checkpoint.txt
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:00 runtime_log
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas   4935680 Nov 26 17:00 result.tar.gz
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:00 boinc_mmap_file
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 17:00 runtime_log.err
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas       658 Nov 26 17:00 MIJMDmfo0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuAMKDmPxvesm.diag
[2025-11-26 17:00:56] -rw-r--r--. 1 boincer umatlas     21394 Nov 26 17:00 stderr.txt
[2025-11-26 17:00:56] HITS file was successfully produced:
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas 928777444 Nov 26 16:58 shared/HITS.pool.root.1
[2025-11-26 17:00:56]  *** Contents of shared directory: ***
[2025-11-26 17:00:56] total 1314008
[2025-11-26 17:00:56] -rw-r--r--. 2 boincer umatlas 411208748 Nov 26 09:50 ATLAS.root_0
[2025-11-26 17:00:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:50 start_atlas.sh
[2025-11-26 17:00:56] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 09:50 input.tar.gz
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas 928777444 Nov 26 16:58 HITS.pool.root.1
[2025-11-26 17:00:56] -rw-------. 1 boincer umatlas   4935680 Nov 26 17:00 result.tar.gz
17:00:58 (1134743): run_atlas exited; CPU time 138959.333268
17:00:58 (1134743): called boinc_finish(0)

</stderr_txt>
]]>

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