Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:27:27 (11396): wrapper (7.7.26015): starting
09:27:27 (11396): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 09:27:27] Arguments: --nthreads 8
[2025-11-26 09:27:27] Threads: 8
[2025-11-26 09:27:27] Checking for CVMFS
[2025-11-26 09:27:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:27:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:27:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:27:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:27:27] 2.11.2.0 14729 117787 145448 153324 1 81 17357520 18432000 1885 130560 0 85497753 99.974 4888158 29404 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 09:27:27] CVMFS is ok
[2025-11-26 09:27:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:27:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:27:27] Further information can be found at the LHC@home message board.
[2025-11-26 09:27:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:27:27] Checking for apptainer binary...
[2025-11-26 09:27:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:27:27] Running /usr/bin/apptainer --version
[2025-11-26 09:27:27] apptainer version 1.3.2-1.el7
[2025-11-26 09:27:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:27:28] c-206-30.aglt2.org
[2025-11-26 09:27:28] apptainer works
[2025-11-26 09:27:28] Set ATHENA_PROC_NUMBER=8
[2025-11-26 09:27:28] Set ATHENA_CORE_NUMBER=8
[2025-11-26 09:27:28] Starting ATLAS job with PandaID=6896577797
[2025-11-26 09:27:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:54:42]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:54:42] 2025-11-27 09:53:35,435 | INFO     | time since job start (69955s) is within the limit (172800.0s)
[2025-11-27 04:54:42] 2025-11-27 09:53:35,858 | INFO     | monitor loop #4990: job 0:6896577797 is in state 'finished'
[2025-11-27 04:54:42] 2025-11-27 09:53:35,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:54:42] 2025-11-27 09:53:36,617 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 04:54:42] 2025-11-27 09:53:36,621 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2522.2916666666665
[2025-11-27 04:54:42] 2025-11-27 09:53:36,624 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896577797/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:54:42] 2025-11-27 09:53:36,624 | INFO     | extracted standard info from prmon json
[2025-11-27 04:54:42] 2025-11-27 09:53:36,624 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:54:42] 2025-11-27 09:53:36,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:54:42] 2025-11-27 09:53:36,640 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:54:42] 2025-11-27 09:53:36,641 | INFO     | sum of square deviations: 467915947554.9167
[2025-11-27 04:54:42] 2025-11-27 09:53:36,665 | INFO     | sum of deviations: 2041454689589.891
[2025-11-27 04:54:42] 2025-11-27 09:53:36,665 | INFO     | mean x: 1764202240.6015694
[2025-11-27 04:54:42] 2025-11-27 09:53:36,665 | INFO     | mean y: 2871804.0610287706
[2025-11-27 04:54:42] 2025-11-27 09:53:36,665 | INFO     | intersect: -7694106587.636926
[2025-11-27 04:54:42] 2025-11-27 09:53:36,666 | INFO     | chi2: 5.983199399120236
[2025-11-27 04:54:42] 2025-11-27 09:53:36,667 | INFO     | sum of square deviations: 461823569350.5992
[2025-11-27 04:54:42] 2025-11-27 09:53:36,701 | INFO     | sum of deviations: 2398541419255.5566
[2025-11-27 04:54:42] 2025-11-27 09:53:36,702 | INFO     | mean x: 1764202088.1042032
[2025-11-27 04:54:42] 2025-11-27 09:53:36,702 | INFO     | mean y: 2880738.1129597197
[2025-11-27 04:54:42] 2025-11-27 09:53:36,702 | INFO     | intersect: -9159734730.398712
[2025-11-27 04:54:42] 2025-11-27 09:53:36,704 | INFO     | chi2: 3.151163511733208
[2025-11-27 04:54:42] 2025-11-27 09:53:36,704 | INFO     | current chi2=3.151163511733208 (change=47.33313564317191 %)
[2025-11-27 04:54:42] 2025-11-27 09:53:36,706 | INFO     | sum of square deviations: 455784308421.26685
[2025-11-27 04:54:42] 2025-11-27 09:53:36,749 | INFO     | sum of deviations: 2565898778809.198
[2025-11-27 04:54:42] 2025-11-27 09:53:36,749 | INFO     | mean x: 1764201935.6068602
[2025-11-27 04:54:42] 2025-11-27 09:53:36,750 | INFO     | mean y: 2884962.948988566
[2025-11-27 04:54:42] 2025-11-27 09:53:36,750 | INFO     | intersect: -9928926002.255465
[2025-11-27 04:54:42] 2025-11-27 09:53:36,751 | INFO     | chi2: 2.441182259894339
[2025-11-27 04:54:42] 2025-11-27 09:53:36,751 | INFO     | current chi2=2.441182259894339 (change=22.530765198165305 %)
[2025-11-27 04:54:42] 2025-11-27 09:53:36,751 | INFO     | right removable region: 1136
[2025-11-27 04:54:42] 2025-11-27 09:53:36,752 | INFO     | sum of square deviations: 461823218173.8076
[2025-11-27 04:54:42] 2025-11-27 09:53:36,788 | INFO     | sum of deviations: 1744088668159.9841
[2025-11-27 04:54:42] 2025-11-27 09:53:36,789 | INFO     | mean x: 1764202393.1033275
[2025-11-27 04:54:42] 2025-11-27 09:53:36,789 | INFO     | mean y: 2879238.661120841
[2025-11-27 04:54:42] 2025-11-27 09:53:36,789 | INFO     | intersect: -6659681847.633669
[2025-11-27 04:54:42] 2025-11-27 09:53:36,791 | INFO     | chi2: 3.94815779970819
[2025-11-27 04:54:42] 2025-11-27 09:53:36,791 | INFO     | current chi2=3.94815779970819 (change=34.012598672731464 %)
[2025-11-27 04:54:42] 2025-11-27 09:53:36,793 | INFO     | sum of square deviations: 455783745758.1089
[2025-11-27 04:54:42] 2025-11-27 09:53:36,817 | INFO     | sum of deviations: 1670164598241.024
[2025-11-27 04:54:42] 2025-11-27 09:53:36,818 | INFO     | mean x: 1764202545.603342
[2025-11-27 04:54:42] 2025-11-27 09:53:36,818 | INFO     | mean y: 2881104.9401934915
[2025-11-27 04:54:42] 2025-11-27 09:53:36,818 | INFO     | intersect: -6461826474.511648
[2025-11-27 04:54:42] 2025-11-27 09:53:36,819 | INFO     | chi2: 3.896834643212559
[2025-11-27 04:54:42] 2025-11-27 09:53:36,819 | INFO     | current chi2=3.896834643212559 (change=1.2999266771815565 %)
[2025-11-27 04:54:42] 2025-11-27 09:53:36,819 | INFO     | left removable region: 20
[2025-11-27 04:54:42] 2025-11-27 09:53:36,820 | INFO     | sum of square deviations: 430993281335.8812
[2025-11-27 04:54:42] 2025-11-27 09:53:36,846 | INFO     | sum of deviations: 2115511160139.701
[2025-11-27 04:54:42] 2025-11-27 09:53:36,847 | INFO     | mean x: 1764202515.108423
[2025-11-27 04:54:42] 2025-11-27 09:53:36,847 | INFO     | mean y: 2897577.308243728
[2025-11-27 04:54:42] 2025-11-27 09:53:36,847 | INFO     | intersect: -8656611215.706635
[2025-11-27 04:54:42] 2025-11-27 09:53:36,848 | INFO     | chi2: 0.2559072037467399
[2025-11-27 04:54:42] 2025-11-27 09:53:36,848 | INFO     | current memory leak: 4.91 B/s (using 1116 data points, chi2=0.26)
[2025-11-27 04:54:42] 2025-11-27 09:53:36,849 | INFO     | could have reported an average CPU frequency of 2629 MHz (42 samples)
[2025-11-27 04:54:42] 2025-11-27 09:53:36,849 | INFO     | ..............................
[2025-11-27 04:54:42] 2025-11-27 09:53:36,849 | INFO     | . Timing measurements:
[2025-11-27 04:54:42] 2025-11-27 09:53:36,849 | INFO     | . get job = 0 s
[2025-11-27 04:54:42] 2025-11-27 09:53:36,849 | INFO     | . initial setup = 2 s
[2025-11-27 04:54:42] 2025-11-27 09:53:36,849 | INFO     | . payload setup = 5 s
[2025-11-27 04:54:42] 2025-11-27 09:53:36,849 | INFO     | . stage-in = 0 s
[2025-11-27 04:54:42] 2025-11-27 09:53:36,850 | INFO     | . payload execution = 69919 s
[2025-11-27 04:54:42] 2025-11-27 09:53:36,850 | INFO     | . stage-out = 4 s
[2025-11-27 04:54:42] 2025-11-27 09:53:36,850 | INFO     | . log creation = 0 s
[2025-11-27 04:54:42] 2025-11-27 09:53:36,850 | INFO     | ..............................
[2025-11-27 04:54:42] 2025-11-27 09:53:37,164 | INFO     | 
[2025-11-27 04:54:42] 2025-11-27 09:53:37,164 | INFO     | job summary report
[2025-11-27 04:54:42] 2025-11-27 09:53:37,165 | INFO     | --------------------------------------------------
[2025-11-27 04:54:42] 2025-11-27 09:53:37,165 | INFO     | PanDA job id: 6896577797
[2025-11-27 04:54:42] 2025-11-27 09:53:37,165 | INFO     | task id: 47556161
[2025-11-27 04:54:42] 2025-11-27 09:53:37,165 | INFO     | errors: (none)
[2025-11-27 04:54:42] 2025-11-27 09:53:37,165 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:54:42] 2025-11-27 09:53:37,165 | INFO     | pilot state: finished 
[2025-11-27 04:54:42] 2025-11-27 09:53:37,166 | INFO     | transexitcode: 0
[2025-11-27 04:54:42] 2025-11-27 09:53:37,166 | INFO     | exeerrorcode: 0
[2025-11-27 04:54:42] 2025-11-27 09:53:37,166 | INFO     | exeerrordiag: 
[2025-11-27 04:54:42] 2025-11-27 09:53:37,166 | INFO     | exitcode: 0
[2025-11-27 04:54:42] 2025-11-27 09:53:37,166 | INFO     | exitmsg: OK
[2025-11-27 04:54:42] 2025-11-27 09:53:37,166 | INFO     | cpuconsumptiontime: 541152 s
[2025-11-27 04:54:42] 2025-11-27 09:53:37,167 | INFO     | nevents: 1000
[2025-11-27 04:54:42] 2025-11-27 09:53:37,167 | INFO     | neventsw: 0
[2025-11-27 04:54:42] 2025-11-27 09:53:37,167 | INFO     | pid: 21575
[2025-11-27 04:54:42] 2025-11-27 09:53:37,167 | INFO     | pgrp: 21575
[2025-11-27 04:54:42] 2025-11-27 09:53:37,167 | INFO     | corecount: 8
[2025-11-27 04:54:42] 2025-11-27 09:53:37,167 | INFO     | event service: False
[2025-11-27 04:54:42] 2025-11-27 09:53:37,168 | INFO     | sizes: {0: 2283434, 1: 2284290, 2: 2284290, 5: 2284580, 13: 2284636, 69928: 2341161, 69934: 2350155, 69935: 2350211, 69941: 2350577}
[2025-11-27 04:54:42] 2025-11-27 09:53:37,168 | INFO     | --------------------------------------------------
[2025-11-27 04:54:42] 2025-11-27 09:53:37,168 | INFO     | 
[2025-11-27 04:54:42] 2025-11-27 09:53:37,168 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 04:54:42] 2025-11-27 09:53:37,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,187 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:54:42] 2025-11-27 09:53:37,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:54:42] 2025-11-27 09:53:37,188 | INFO     | job 6896577797 has completed (purged errors)
[2025-11-27 04:54:42] 2025-11-27 09:53:37,188 | INFO     | overall cleanup function is called
[2025-11-27 04:54:42] 2025-11-27 09:53:38,200 | INFO     | --- collectZombieJob: --- 10, [21575]
[2025-11-27 04:54:42] 2025-11-27 09:53:38,201 | INFO     | zombie collector waiting for pid 21575
[2025-11-27 04:54:42] 2025-11-27 09:53:38,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:54:42] 2025-11-27 09:53:38,201 | INFO     | collected zombie processes
[2025-11-27 04:54:42] 2025-11-27 09:53:38,201 | INFO     | will attempt to kill all subprocesses of pid=21575
[2025-11-27 04:54:42] 2025-11-27 09:53:38,338 | INFO     | process IDs to be killed: [21575] (in reverse order)
[2025-11-27 04:54:42] 2025-11-27 09:53:38,384 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:54:42] 2025-11-27 09:53:38,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:54:42] 2025-11-27 09:53:38,389 | INFO     | did not find any defunct processes belonging to 21575
[2025-11-27 04:54:42] 2025-11-27 09:53:38,394 | INFO     | did not find any defunct processes belonging to 21575
[2025-11-27 04:54:42] 2025-11-27 09:53:38,396 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:54:42] 2025-11-27 09:53:38,397 | INFO     | ready for new job
[2025-11-27 04:54:42] 2025-11-27 09:53:38,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:54:42] 2025-11-27 09:53:38,402 | INFO     | ***************************************
[2025-11-27 04:54:42] 2025-11-27 09:53:38,402 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:54:42] 2025-11-27 09:53:38,402 | INFO     | ***************************************
[2025-11-27 04:54:42] 2025-11-27 09:53:38,402 | INFO     | 
[2025-11-27 04:54:42] 2025-11-27 09:53:38,404 | INFO     | architecture information:
[2025-11-27 04:54:42] 2025-11-27 09:53:38,404 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:54:42] 2025-11-27 09:53:38,419 | INFO     | cat /etc/os-release:
[2025-11-27 04:54:42] NAME="CentOS Linux"
[2025-11-27 04:54:42] VERSION="7 (Core)"
[2025-11-27 04:54:42] ID="centos"
[2025-11-27 04:54:42] ID_LIKE="rhel fedora"
[2025-11-27 04:54:42] VERSION_ID="7"
[2025-11-27 04:54:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:54:42] ANSI_COLOR="0;31"
[2025-11-27 04:54:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:54:42] HOME_URL="https://www.centos.org/"
[2025-11-27 04:54:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:54:42] 
[2025-11-27 04:54:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:54:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:54:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:54:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:54:42] 
[2025-11-27 04:54:42] 2025-11-27 09:53:38,420 | INFO     | ***************************************
[2025-11-27 04:54:42] 2025-11-27 09:53:38,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 04:54:42] 2025-11-27 09:53:38,937 | INFO     | sufficient remaining disk space (24950865920 B)
[2025-11-27 04:54:42] 2025-11-27 09:53:38,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:54:42] 2025-11-27 09:53:38,937 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:54:42] 2025-11-27 09:53:38,938 | INFO     | update_server=False
[2025-11-27 04:54:42] 2025-11-27 09:53:38,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:54:42] 2025-11-27 09:53:38,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:54:42] 2025-11-27 09:53:39,048 | INFO     | all data control threads have been joined
[2025-11-27 04:54:42] 2025-11-27 09:53:39,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:54:42] 2025-11-27 09:53:39,372 | INFO     | aborting loop
[2025-11-27 04:54:42] 2025-11-27 09:53:39,730 | INFO     | all payload control threads have been joined
[2025-11-27 04:54:42] 2025-11-27 09:53:39,945 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:39,945 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:39,980 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:40,021 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:40,054 | INFO     | [data] control thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:40,059 | INFO     | all job control threads have been joined
[2025-11-27 04:54:42] 2025-11-27 09:53:40,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:54:42] 2025-11-27 09:53:40,173 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:40,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:40,377 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:40,737 | INFO     | [payload] control thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:40,778 | INFO     | [job] validate thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:40,828 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:40,920 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:41,062 | INFO     | [job] control thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:41,273 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:41,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:54:42] 2025-11-27 09:53:42,084 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:53:45,595 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:54:42] 2025-11-27 09:54:08,632 | INFO     | PID=15125 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 04:54:42] 2025-11-27 09:54:08,632 | INFO     | .. there are 3 such processes running
[2025-11-27 04:54:42] 2025-11-27 09:54:08,632 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:54:42] 2025-11-27 09:54:08,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:54:42] 2025-11-27 09:54:08,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:54:42] 2025-11-27 09:54:35,656 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:54:42] 2025-11-27 09:54:36,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139871429670720)>', '<ExcThread(monitor, started 139870768981760)>']
[2025-11-27 04:54:42] 2025-11-27 09:54:37,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:54:42] 2025-11-27 09:54:37,786 | INFO     | [monitor] control thread has ended
[2025-11-27 04:54:42] 2025-11-27 09:54:41,826 | INFO     | all workflow threads have been joined
[2025-11-27 04:54:42] 2025-11-27 09:54:41,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:54:42] 2025-11-27 09:54:41,827 | INFO     | traces error code: 0
[2025-11-27 04:54:42] 2025-11-27 09:54:41,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:54:42] 2025-11-27 09:54:41,925 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:54:42] 2025-11-27 09:54:41,927 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:54:42] 2025-11-27 09:54:41,929 [wrapper] pilotpid: 15125
[2025-11-27 04:54:42] 2025-11-27 09:54:41,932 [wrapper] Pilot exit status: 0
[2025-11-27 04:54:42] 2025-11-27 09:54:41,939 [wrapper] pandaids: 6896577797
[2025-11-27 04:54:42] 2025-11-27 09:54:41,981 [wrapper] cleanup supervisor_pilot 11650 15126
[2025-11-27 04:54:42] 2025-11-27 09:54:41,987 [wrapper] Test setup, not cleaning
[2025-11-27 04:54:42] 2025-11-27 09:54:41,990 [wrapper] apfmon messages muted
[2025-11-27 04:54:42] 2025-11-27 09:54:41,992 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:54:42] 2025-11-27 09:54:41,995 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:54:42]  *** Error codes and diagnostics ***
[2025-11-27 04:54:42]     "exeErrorCode": 0,
[2025-11-27 04:54:42]     "exeErrorDiag": "",
[2025-11-27 04:54:42]     "pilotErrorCode": 0,
[2025-11-27 04:54:42]     "pilotErrorDiag": "",
[2025-11-27 04:54:42]  *** Listing of results directory ***
[2025-11-27 04:54:42] total 1333564
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 00:23 queuedata.json
[2025-11-27 04:54:42] -rwx------ 1 boincer umatlas     36292 Nov 25 00:24 runpilot2-wrapper.sh
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas       100 Nov 26 09:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:54:42] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 09:27 run_atlas
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas       105 Nov 26 09:27 job.xml
[2025-11-27 04:54:42] -rw-r--r-- 2 boincer umatlas 410769694 Nov 26 09:27 EVNT.47483658._002099.pool.root.1
[2025-11-27 04:54:42] drwxrwx--x 2 boincer umatlas      4096 Nov 26 09:27 shared
[2025-11-27 04:54:42] -rw-r--r-- 2 boincer umatlas    590103 Nov 26 09:27 input.tar.gz
[2025-11-27 04:54:42] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 09:27 start_atlas.sh
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas         0 Nov 26 09:27 boinc_lockfile
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 09:27 pandaJob.out
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas        57 Nov 26 09:27 setup.sh.local
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas    992360 Nov 26 09:27 agis_schedconf.cvmfs.json
[2025-11-27 04:54:42] drwx------ 5 boincer umatlas      4096 Nov 26 09:27 pilot3
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas       533 Nov 27 04:39 boinc_task_state.xml
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas      5954 Nov 27 04:47 init_data.xml
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas 926918356 Nov 27 04:52 HITS.47556161._000827.pool.root.1
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas      1068 Nov 27 04:53 memory_monitor_summary.json
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas   1516240 Nov 27 04:53 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas   2306470 Nov 27 04:53 log.47556161._000827.job.log.tgz.1
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas        95 Nov 27 04:53 pilot_heartbeat.json
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas      8662 Nov 27 04:53 heartbeat.json
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas        29 Nov 27 04:54 wrapper_checkpoint.txt
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 04:54 boinc_mmap_file
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas      4821 Nov 27 04:54 pilotlog.txt
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas   9671216 Nov 27 04:54 log.47556161._000827.job.log.1
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas       353 Nov 27 04:54 output.list
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas       620 Nov 27 04:54 runtime_log
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas  12001280 Nov 27 04:54 result.tar.gz
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas       668 Nov 27 04:54 LyILDmki0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJAMKDm0KKBun.diag
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 04:54 runtime_log.err
[2025-11-27 04:54:42] -rw-r--r-- 1 boincer umatlas     21313 Nov 27 04:54 stderr.txt
[2025-11-27 04:54:42] HITS file was successfully produced:
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas 926918356 Nov 27 04:52 shared/HITS.pool.root.1
[2025-11-27 04:54:42]  *** Contents of shared directory: ***
[2025-11-27 04:54:42] total 1318660
[2025-11-27 04:54:42] -rw-r--r-- 2 boincer umatlas 410769694 Nov 26 09:27 ATLAS.root_0
[2025-11-27 04:54:42] -rw-r--r-- 2 boincer umatlas    590103 Nov 26 09:27 input.tar.gz
[2025-11-27 04:54:42] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 09:27 start_atlas.sh
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas 926918356 Nov 27 04:52 HITS.pool.root.1
[2025-11-27 04:54:42] -rw------- 1 boincer umatlas  12001280 Nov 27 04:54 result.tar.gz
04:54:43 (11396): run_atlas exited; CPU time 540177.795201
04:54:43 (11396): called boinc_finish(0)

</stderr_txt>
]]>

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