Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:28:20 (4089973): wrapper (7.7.26015): starting
09:28:20 (4089973): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 09:28:20] Arguments: --nthreads 8
[2025-11-26 09:28:20] Threads: 8
[2025-11-26 09:28:20] Checking for CVMFS
[2025-11-26 09:28:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:28:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:28:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:28:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:28:21] 2.13.3.0 12213 30170 235904 153324 3 256 36239685 40960001 52961 16776704 0 271768203 99.725 196439085 35686 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 09:28:21] CVMFS is ok
[2025-11-26 09:28:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:28:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:28:21] Further information can be found at the LHC@home message board.
[2025-11-26 09:28:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:28:21] Checking for apptainer binary...
[2025-11-26 09:28:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:28:21] Running /usr/bin/apptainer --version
[2025-11-26 09:28:21] apptainer version 1.4.4-1.el9
[2025-11-26 09:28:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:28:22] c7-3-35.aglt2.org
[2025-11-26 09:28:22] apptainer works
[2025-11-26 09:28:22] Set ATHENA_PROC_NUMBER=8
[2025-11-26 09:28:22] Set ATHENA_CORE_NUMBER=8
[2025-11-26 09:28:22] Starting ATLAS job with PandaID=6897881193
[2025-11-26 09:28:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:09:31]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:09:31] 2025-11-27 04:08:50,477 | INFO     | this job has now completed (state=finished)
[2025-11-26 23:09:31] 2025-11-27 04:08:50,477 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-26 23:09:31] 2025-11-27 04:08:50,477 | INFO     | log transfer has been attempted: DONE
[2025-11-26 23:09:31] 2025-11-27 04:08:50,477 | INFO     | job 6897881193 has finished - writing final server update
[2025-11-26 23:09:31] 2025-11-27 04:08:50,477 | INFO     | total number of processed events: 1000 (read)
[2025-11-26 23:09:31] 2025-11-27 04:08:50,478 | INFO     | executing command: lscpu
[2025-11-26 23:09:31] 2025-11-27 04:08:50,543 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 23:09:31] 2025-11-27 04:08:51,369 | INFO     | monitor loop #3185: job 0:6897881193 is in state 'finished'
[2025-11-26 23:09:31] 2025-11-27 04:08:51,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:09:31] 2025-11-27 04:08:52,482 | INFO     | time since job start (49213s) is within the limit (172800.0s)
[2025-11-26 23:09:31] 2025-11-27 04:08:53,884 | INFO     | monitor loop #3186: job 0:6897881193 is in state 'finished'
[2025-11-26 23:09:31] 2025-11-27 04:08:53,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:09:31] 2025-11-27 04:08:54,492 | INFO     | time since job start (49215s) is within the limit (172800.0s)
[2025-11-26 23:09:31] 2025-11-27 04:08:54,492 | INFO     | 49217s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-26 23:09:31] 2025-11-27 04:08:56,390 | INFO     | monitor loop #3187: job 0:6897881193 is in state 'finished'
[2025-11-26 23:09:31] 2025-11-27 04:08:56,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:09:31] 2025-11-27 04:08:56,509 | INFO     | time since job start (49217s) is within the limit (172800.0s)
[2025-11-26 23:09:31] 2025-11-27 04:08:57,129 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 23:09:31] 2025-11-27 04:08:57,137 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3199.091968749999
[2025-11-26 23:09:31] 2025-11-27 04:08:57,153 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6897881193/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:09:31] 2025-11-27 04:08:57,154 | INFO     | extracted standard info from prmon json
[2025-11-26 23:09:31] 2025-11-27 04:08:57,155 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:09:31] 2025-11-27 04:08:57,155 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:09:31] 2025-11-27 04:08:57,171 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:09:31] 2025-11-27 04:08:57,172 | INFO     | sum of square deviations: 162366714521.39954
[2025-11-26 23:09:31] 2025-11-27 04:08:57,185 | INFO     | sum of deviations: 8650788909793.038
[2025-11-26 23:09:31] 2025-11-27 04:08:57,185 | INFO     | mean x: 1764191910.0272954
[2025-11-26 23:09:31] 2025-11-27 04:08:57,185 | INFO     | mean y: 3691715.452853598
[2025-11-26 23:09:31] 2025-11-27 04:08:57,186 | INFO     | intersect: -93991261960.83943
[2025-11-26 23:09:31] 2025-11-27 04:08:57,186 | INFO     | chi2: 18.379650080942714
[2025-11-26 23:09:31] 2025-11-27 04:08:57,187 | INFO     | sum of square deviations: 159363932027.50058
[2025-11-26 23:09:31] 2025-11-27 04:08:57,200 | INFO     | sum of deviations: 9019398421892.713
[2025-11-26 23:09:31] 2025-11-27 04:08:57,200 | INFO     | mean x: 1764191757.5305867
[2025-11-26 23:09:31] 2025-11-27 04:08:57,201 | INFO     | mean y: 3710438.379525593
[2025-11-26 23:09:31] 2025-11-27 04:08:57,201 | INFO     | intersect: -99842899464.80525
[2025-11-26 23:09:31] 2025-11-27 04:08:57,201 | INFO     | chi2: 14.336714837622056
[2025-11-26 23:09:31] 2025-11-27 04:08:57,202 | INFO     | current chi2=14.336714837622056 (change=21.996802036577677 %)
[2025-11-26 23:09:31] 2025-11-27 04:08:57,202 | INFO     | right removable region: 800
[2025-11-26 23:09:31] 2025-11-27 04:08:57,202 | INFO     | sum of square deviations: 159363721699.5609
[2025-11-26 23:09:31] 2025-11-27 04:08:57,216 | INFO     | sum of deviations: 8331017101187.221
[2025-11-26 23:09:31] 2025-11-27 04:08:57,216 | INFO     | mean x: 1764192062.5293384
[2025-11-26 23:09:31] 2025-11-27 04:08:57,216 | INFO     | mean y: 3707937.6928838952
[2025-11-26 23:09:31] 2025-11-27 04:08:57,216 | INFO     | intersect: -92222515734.58704
[2025-11-26 23:09:31] 2025-11-27 04:08:57,217 | INFO     | chi2: 16.359014836410353
[2025-11-26 23:09:31] 2025-11-27 04:08:57,217 | INFO     | current chi2=16.359014836410353 (change=10.993872220818256 %)
[2025-11-26 23:09:31] 2025-11-27 04:08:57,217 | INFO     | left removable region: 10
[2025-11-26 23:09:31] 2025-11-27 04:08:57,218 | INFO     | sum of square deviations: 152888349990.20905
[2025-11-26 23:09:31] 2025-11-27 04:08:57,231 | INFO     | sum of deviations: 8596016794004.453
[2025-11-26 23:09:31] 2025-11-27 04:08:57,231 | INFO     | mean x: 1764192032.0316455
[2025-11-26 23:09:31] 2025-11-27 04:08:57,231 | INFO     | mean y: 3736758.6620253166
[2025-11-26 23:09:31] 2025-11-27 04:08:57,231 | INFO     | intersect: -99186452265.96957
[2025-11-26 23:09:31] 2025-11-27 04:08:57,232 | INFO     | chi2: 11.856386145900876
[2025-11-26 23:09:31] 2025-11-27 04:08:57,232 | INFO     | current memory leak: 56.22 B/s (using 790 data points, chi2=11.86)
[2025-11-26 23:09:31] 2025-11-27 04:08:57,233 | INFO     | could have reported an average CPU frequency of 3209 MHz (31 samples)
[2025-11-26 23:09:31] 2025-11-27 04:08:57,233 | INFO     | ..............................
[2025-11-26 23:09:31] 2025-11-27 04:08:57,233 | INFO     | . Timing measurements:
[2025-11-26 23:09:31] 2025-11-27 04:08:57,233 | INFO     | . get job = 0 s
[2025-11-26 23:09:31] 2025-11-27 04:08:57,233 | INFO     | . initial setup = 3 s
[2025-11-26 23:09:31] 2025-11-27 04:08:57,233 | INFO     | . payload setup = 10 s
[2025-11-26 23:09:31] 2025-11-27 04:08:57,233 | INFO     | . stage-in = 0 s
[2025-11-26 23:09:31] 2025-11-27 04:08:57,233 | INFO     | . payload execution = 49169 s
[2025-11-26 23:09:31] 2025-11-27 04:08:57,233 | INFO     | . stage-out = 3 s
[2025-11-26 23:09:31] 2025-11-27 04:08:57,236 | INFO     | . log creation = 0 s
[2025-11-26 23:09:31] 2025-11-27 04:08:57,236 | INFO     | ..............................
[2025-11-26 23:09:31] 2025-11-27 04:08:57,735 | INFO     | 
[2025-11-26 23:09:31] 2025-11-27 04:08:57,735 | INFO     | job summary report
[2025-11-26 23:09:31] 2025-11-27 04:08:57,735 | INFO     | --------------------------------------------------
[2025-11-26 23:09:31] 2025-11-27 04:08:57,735 | INFO     | PanDA job id: 6897881193
[2025-11-26 23:09:31] 2025-11-27 04:08:57,735 | INFO     | task id: 47556173
[2025-11-26 23:09:31] 2025-11-27 04:08:57,736 | INFO     | errors: (none)
[2025-11-26 23:09:31] 2025-11-27 04:08:57,736 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:09:31] 2025-11-27 04:08:57,736 | INFO     | pilot state: finished 
[2025-11-26 23:09:31] 2025-11-27 04:08:57,736 | INFO     | transexitcode: 0
[2025-11-26 23:09:31] 2025-11-27 04:08:57,736 | INFO     | exeerrorcode: 0
[2025-11-26 23:09:31] 2025-11-27 04:08:57,736 | INFO     | exeerrordiag: 
[2025-11-26 23:09:31] 2025-11-27 04:08:57,736 | INFO     | exitcode: 0
[2025-11-26 23:09:31] 2025-11-27 04:08:57,737 | INFO     | exitmsg: OK
[2025-11-26 23:09:31] 2025-11-27 04:08:57,737 | INFO     | cpuconsumptiontime: 197364 s
[2025-11-26 23:09:31] 2025-11-27 04:08:57,738 | INFO     | nevents: 1000
[2025-11-26 23:09:31] 2025-11-27 04:08:57,738 | INFO     | neventsw: 0
[2025-11-26 23:09:31] 2025-11-27 04:08:57,738 | INFO     | pid: 4101561
[2025-11-26 23:09:31] 2025-11-27 04:08:57,738 | INFO     | pgrp: 4101561
[2025-11-26 23:09:31] 2025-11-27 04:08:57,739 | INFO     | corecount: 8
[2025-11-26 23:09:31] 2025-11-27 04:08:57,739 | INFO     | event service: False
[2025-11-26 23:09:31] 2025-11-27 04:08:57,739 | INFO     | sizes: {0: 2284262, 8: 2284524, 11: 2284552, 49184: 2333578, 49187: 2342572, 49190: 2342628, 49199: 2343002}
[2025-11-26 23:09:31] 2025-11-27 04:08:57,739 | INFO     | --------------------------------------------------
[2025-11-26 23:09:31] 2025-11-27 04:08:57,739 | INFO     | 
[2025-11-26 23:09:31] 2025-11-27 04:08:57,740 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 23:09:31] 2025-11-27 04:08:57,775 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,775 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,775 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,775 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,776 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,777 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,777 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,777 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,777 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,777 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,778 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,778 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:09:31] 2025-11-27 04:08:57,778 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,778 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:09:31] 2025-11-27 04:08:57,778 | INFO     | job 6897881193 has completed (purged errors)
[2025-11-26 23:09:31] 2025-11-27 04:08:57,779 | INFO     | overall cleanup function is called
[2025-11-26 23:09:31] 2025-11-27 04:08:58,801 | INFO     | --- collectZombieJob: --- 10, [4101561]
[2025-11-26 23:09:31] 2025-11-27 04:08:58,801 | INFO     | zombie collector waiting for pid 4101561
[2025-11-26 23:09:31] 2025-11-27 04:08:58,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:09:31] 2025-11-27 04:08:58,802 | INFO     | collected zombie processes
[2025-11-26 23:09:31] 2025-11-27 04:08:58,802 | INFO     | will attempt to kill all subprocesses of pid=4101561
[2025-11-26 23:09:31] 2025-11-27 04:08:59,703 | INFO     | process IDs to be killed: [4101561] (in reverse order)
[2025-11-26 23:09:31] 2025-11-27 04:08:59,958 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:09:31] 2025-11-27 04:08:59,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:09:31] 2025-11-27 04:08:59,999 | INFO     | did not find any defunct processes belonging to 4101561
[2025-11-26 23:09:31] 2025-11-27 04:09:00,033 | INFO     | did not find any defunct processes belonging to 4101561
[2025-11-26 23:09:31] 2025-11-27 04:09:00,034 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:09:31] 2025-11-27 04:09:00,034 | INFO     | ready for new job
[2025-11-26 23:09:31] 2025-11-27 04:09:00,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:09:31] 2025-11-27 04:09:00,038 | INFO     | ***************************************
[2025-11-26 23:09:31] 2025-11-27 04:09:00,038 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:09:31] 2025-11-27 04:09:00,038 | INFO     | ***************************************
[2025-11-26 23:09:31] 2025-11-27 04:09:00,038 | INFO     | 
[2025-11-26 23:09:31] 2025-11-27 04:09:00,043 | INFO     | architecture information:
[2025-11-26 23:09:31] 2025-11-27 04:09:00,044 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:09:31] 2025-11-27 04:09:00,070 | INFO     | cat /etc/os-release:
[2025-11-26 23:09:31] NAME="CentOS Linux"
[2025-11-26 23:09:31] VERSION="7 (Core)"
[2025-11-26 23:09:31] ID="centos"
[2025-11-26 23:09:31] ID_LIKE="rhel fedora"
[2025-11-26 23:09:31] VERSION_ID="7"
[2025-11-26 23:09:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:09:31] ANSI_COLOR="0;31"
[2025-11-26 23:09:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:09:31] HOME_URL="https://www.centos.org/"
[2025-11-26 23:09:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:09:31] 
[2025-11-26 23:09:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:09:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:09:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:09:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:09:31] 
[2025-11-26 23:09:31] 2025-11-27 04:09:00,070 | INFO     | ***************************************
[2025-11-26 23:09:31] 2025-11-27 04:09:00,574 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 23:09:31] 2025-11-27 04:09:00,610 | INFO     | sufficient remaining disk space (117402763264 B)
[2025-11-26 23:09:31] 2025-11-27 04:09:00,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:09:31] 2025-11-27 04:09:00,611 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:09:31] 2025-11-27 04:09:00,611 | INFO     | update_server=False
[2025-11-26 23:09:31] 2025-11-27 04:09:00,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:09:31] 2025-11-27 04:09:00,611 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:09:31] 2025-11-27 04:09:00,611 | INFO     | aborting loop
[2025-11-26 23:09:31] 2025-11-27 04:09:00,721 | INFO     | all data control threads have been joined
[2025-11-26 23:09:31] 2025-11-27 04:09:00,809 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:09:31] 2025-11-27 04:09:01,103 | INFO     | all job control threads have been joined
[2025-11-26 23:09:31] 2025-11-27 04:09:01,621 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:01,627 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:01,727 | INFO     | [data] control thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:01,895 | INFO     | all payload control threads have been joined
[2025-11-26 23:09:31] 2025-11-27 04:09:01,991 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:02,025 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:02,090 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:02,116 | INFO     | [job] control thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:02,120 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:02,167 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:02,299 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:02,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:09:31] 2025-11-27 04:09:02,726 | INFO     | [job] validate thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:02,817 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:02,903 | INFO     | [payload] control thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:02,942 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:03,346 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:03,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:09:31] 2025-11-27 04:09:04,148 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:09:31] 2025-11-27 04:09:07,538 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:09:31] 2025-11-27 04:09:08,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660806776640)>', '<ExcThread(monitor, started 139660323976960)>']
[2025-11-26 23:09:31] 2025-11-27 04:09:13,680 | INFO     | all workflow threads have been joined
[2025-11-26 23:09:31] 2025-11-27 04:09:13,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:09:31] 2025-11-27 04:09:13,681 | INFO     | traces error code: 0
[2025-11-26 23:09:31] 2025-11-27 04:09:13,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:09:31] 2025-11-27 04:09:30,606 | INFO     | PID=4094620 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:09:31] 2025-11-27 04:09:30,607 | INFO     | .. there are 89 such processes running
[2025-11-26 23:09:31] 2025-11-27 04:09:30,607 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:09:31] 2025-11-27 04:09:30,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:09:31] 2025-11-27 04:09:30,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:09:31] 2025-11-27 04:09:30,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:09:31] 2025-11-27 04:09:30,607 | INFO     | [monitor] control thread has ended
[2025-11-26 23:09:31] 2025-11-27 04:09:30,788 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:09:31] 2025-11-27 04:09:30,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:09:31] 2025-11-27 04:09:30,793 [wrapper] pilotpid: 4094620
[2025-11-26 23:09:31] 2025-11-27 04:09:30,795 [wrapper] Pilot exit status: 0
[2025-11-26 23:09:31] 2025-11-27 04:09:30,805 [wrapper] pandaids: 6897881193
[2025-11-26 23:09:31] 2025-11-27 04:09:31,002 [wrapper] cleanup supervisor_pilot 3988324 4094621
[2025-11-26 23:09:31] 2025-11-27 04:09:31,008 [wrapper] Test setup, not cleaning
[2025-11-26 23:09:31] 2025-11-27 04:09:31,012 [wrapper] apfmon messages muted
[2025-11-26 23:09:31] 2025-11-27 04:09:31,029 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:09:31] 2025-11-27 04:09:31,036 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:09:31]  *** Error codes and diagnostics ***
[2025-11-26 23:09:31]     "exeErrorCode": 0,
[2025-11-26 23:09:31]     "exeErrorDiag": "",
[2025-11-26 23:09:31]     "pilotErrorCode": 0,
[2025-11-26 23:09:31]     "pilotErrorDiag": "",
[2025-11-26 23:09:31]  *** Listing of results directory ***
[2025-11-26 23:09:31] total 1315104
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-26 23:09:31] -rwx------. 1 boincer umatlas     36292 Nov 25 21:00 runpilot2-wrapper.sh
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:00 queuedata.json
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas       100 Nov 26 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:09:31] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 09:28 run_atlas
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas       105 Nov 26 09:28 job.xml
[2025-11-26 23:09:31] -rw-r--r--. 2 boincer umatlas 409256056 Nov 26 09:28 EVNT.47483658._003141.pool.root.1
[2025-11-26 23:09:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:28 start_atlas.sh
[2025-11-26 23:09:31] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 09:28 shared
[2025-11-26 23:09:31] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 09:28 input.tar.gz
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas         0 Nov 26 09:28 boinc_lockfile
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 09:28 pandaJob.out
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas        57 Nov 26 09:28 setup.sh.local
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas    992360 Nov 26 09:28 agis_schedconf.cvmfs.json
[2025-11-26 23:09:31] drwx------. 5 boincer umatlas      4096 Nov 26 09:28 pilot3
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas       533 Nov 26 22:56 boinc_task_state.xml
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas      6950 Nov 26 23:02 init_data.xml
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas 916405248 Nov 26 23:08 HITS.47556173._001000.pool.root.1
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas      1075 Nov 26 23:08 memory_monitor_summary.json
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas   1516240 Nov 26 23:08 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas   2017752 Nov 26 23:08 log.47556173._001000.job.log.tgz.1
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas        95 Nov 26 23:08 pilot_heartbeat.json
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas      8652 Nov 26 23:08 heartbeat.json
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 23:09 boinc_mmap_file
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas        29 Nov 26 23:09 wrapper_checkpoint.txt
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas       823 Nov 26 23:09 pilotlog.txt
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas   6526952 Nov 26 23:09 log.47556173._001000.job.log.1
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas       353 Nov 26 23:09 output.list
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas       620 Nov 26 23:09 runtime_log
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas   8560640 Nov 26 23:09 result.tar.gz
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 23:09 runtime_log.err
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas       664 Nov 26 23:09 pKtLDm70Ji8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHhMKDmmH41jm.diag
[2025-11-26 23:09:31] -rw-r--r--. 1 boincer umatlas     21769 Nov 26 23:09 stderr.txt
[2025-11-26 23:09:31] HITS file was successfully produced:
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas 916405248 Nov 26 23:08 shared/HITS.pool.root.1
[2025-11-26 23:09:31]  *** Contents of shared directory: ***
[2025-11-26 23:09:31] total 1303560
[2025-11-26 23:09:31] -rw-r--r--. 2 boincer umatlas 409256056 Nov 26 09:28 ATLAS.root_0
[2025-11-26 23:09:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:28 start_atlas.sh
[2025-11-26 23:09:31] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 09:28 input.tar.gz
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas 916405248 Nov 26 23:08 HITS.pool.root.1
[2025-11-26 23:09:31] -rw-------. 1 boincer umatlas   8560640 Nov 26 23:09 result.tar.gz
23:09:33 (4089973): run_atlas exited; CPU time 198920.263920
23:09:33 (4089973): called boinc_finish(0)

</stderr_txt>
]]>

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