Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:14:02 (1272979): wrapper (7.7.26015): starting
09:14:02 (1272979): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 09:14:02] Arguments: --nthreads 8
[2025-11-26 09:14:02] Threads: 8
[2025-11-26 09:14:02] Checking for CVMFS
[2025-11-26 09:14:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:14:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:14:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:14:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:14:03] 2.13.3.0 12460 30155 348928 153323 3 694 31181261 32935936 62203 16776704 0 302736319 99.638 283538074 37332 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 09:14:03] CVMFS is ok
[2025-11-26 09:14:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:14:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:14:03] Further information can be found at the LHC@home message board.
[2025-11-26 09:14:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:14:03] Checking for apptainer binary...
[2025-11-26 09:14:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:14:03] Running /usr/bin/apptainer --version
[2025-11-26 09:14:03] apptainer version 1.4.4-1.el9
[2025-11-26 09:14:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:14:03] c7-6-31.aglt2.org
[2025-11-26 09:14:03] apptainer works
[2025-11-26 09:14:03] Set ATHENA_PROC_NUMBER=8
[2025-11-26 09:14:03] Set ATHENA_CORE_NUMBER=8
[2025-11-26 09:14:03] Starting ATLAS job with PandaID=6896713648
[2025-11-26 09:14:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:44:17]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:44:17] 2025-11-26 22:43:33,767 | INFO     | monitor loop #1992: job 0:6896713648 is in state 'finished'
[2025-11-26 17:44:17] 2025-11-26 22:43:33,767 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:44:17] 2025-11-26 22:43:34,394 | INFO     | time since job start (30556s) is within the limit (172800.0s)
[2025-11-26 17:44:17] 2025-11-26 22:43:36,278 | INFO     | monitor loop #1993: job 0:6896713648 is in state 'finished'
[2025-11-26 17:44:17] 2025-11-26 22:43:36,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:44:17] 2025-11-26 22:43:36,399 | INFO     | time since job start (30558s) is within the limit (172800.0s)
[2025-11-26 17:44:17] 2025-11-26 22:43:38,404 | INFO     | time since job start (30560s) is within the limit (172800.0s)
[2025-11-26 17:44:17] 2025-11-26 22:43:38,784 | INFO     | monitor loop #1994: job 0:6896713648 is in state 'finished'
[2025-11-26 17:44:17] 2025-11-26 22:43:38,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:44:17] 2025-11-26 22:43:40,431 | INFO     | time since job start (30562s) is within the limit (172800.0s)
[2025-11-26 17:44:17] 2025-11-26 22:43:40,499 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 17:44:17] 2025-11-26 22:43:40,512 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3417.837187500001
[2025-11-26 17:44:17] 2025-11-26 22:43:40,527 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6896713648/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:44:17] 2025-11-26 22:43:40,528 | INFO     | extracted standard info from prmon json
[2025-11-26 17:44:17] 2025-11-26 22:43:40,528 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:44:17] 2025-11-26 22:43:40,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:44:17] 2025-11-26 22:43:40,536 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:44:17] 2025-11-26 22:43:40,537 | INFO     | sum of square deviations: 38993307334.90221
[2025-11-26 17:44:17] 2025-11-26 22:43:40,541 | INFO     | sum of deviations: 4171107476749.481
[2025-11-26 17:44:17] 2025-11-26 22:43:40,541 | INFO     | mean x: 1764181741.986028
[2025-11-26 17:44:17] 2025-11-26 22:43:40,541 | INFO     | mean y: 4036873.640718563
[2025-11-26 17:44:17] 2025-11-26 22:43:40,541 | INFO     | intersect: -188710185060.44748
[2025-11-26 17:44:17] 2025-11-26 22:43:40,542 | INFO     | chi2: 12.22907571005452
[2025-11-26 17:44:17] 2025-11-26 22:43:40,542 | INFO     | sum of square deviations: 37837603769.99192
[2025-11-26 17:44:17] 2025-11-26 22:43:40,546 | INFO     | sum of deviations: 4404799660410.207
[2025-11-26 17:44:17] 2025-11-26 22:43:40,546 | INFO     | mean x: 1764181589.4959676
[2025-11-26 17:44:17] 2025-11-26 22:43:40,546 | INFO     | mean y: 4067673.852822581
[2025-11-26 17:44:17] 2025-11-26 22:43:40,547 | INFO     | intersect: -205370102253.8069
[2025-11-26 17:44:17] 2025-11-26 22:43:40,547 | INFO     | chi2: 8.25234043870884
[2025-11-26 17:44:17] 2025-11-26 22:43:40,547 | INFO     | current chi2=8.25234043870884 (change=32.51869041971898 %)
[2025-11-26 17:44:17] 2025-11-26 22:43:40,547 | INFO     | sum of square deviations: 36704880006.0
[2025-11-26 17:44:17] 2025-11-26 22:43:40,552 | INFO     | sum of deviations: 4329888698698.001
[2025-11-26 17:44:17] 2025-11-26 22:43:40,552 | INFO     | mean x: 1764181437.0
[2025-11-26 17:44:17] 2025-11-26 22:43:40,552 | INFO     | mean y: 4057565.4725050917
[2025-11-26 17:44:17] 2025-11-26 22:43:40,552 | INFO     | intersect: -208107486874.13416
[2025-11-26 17:44:17] 2025-11-26 22:43:40,552 | INFO     | chi2: 8.083767917716228
[2025-11-26 17:44:17] 2025-11-26 22:43:40,552 | INFO     | current chi2=8.083767917716228 (change=2.0427237853869578 %)
[2025-11-26 17:44:17] 2025-11-26 22:43:40,552 | INFO     | right removable region: 490
[2025-11-26 17:44:17] 2025-11-26 22:43:40,553 | INFO     | sum of square deviations: 37837363187.96765
[2025-11-26 17:44:17] 2025-11-26 22:43:40,557 | INFO     | sum of deviations: 3955698204300.733
[2025-11-26 17:44:17] 2025-11-26 22:43:40,557 | INFO     | mean x: 1764181894.4919355
[2025-11-26 17:44:17] 2025-11-26 22:43:40,557 | INFO     | mean y: 4065241.808467742
[2025-11-26 17:44:17] 2025-11-26 22:43:40,557 | INFO     | intersect: -184431914544.4577
[2025-11-26 17:44:17] 2025-11-26 22:43:40,558 | INFO     | chi2: 10.33651169374148
[2025-11-26 17:44:17] 2025-11-26 22:43:40,558 | INFO     | current chi2=10.33651169374148 (change=15.475936703515615 %)
[2025-11-26 17:44:17] 2025-11-26 22:43:40,558 | INFO     | left removable region: 10
[2025-11-26 17:44:17] 2025-11-26 22:43:40,558 | INFO     | sum of square deviations: 34292695757.96675
[2025-11-26 17:44:17] 2025-11-26 22:43:40,562 | INFO     | sum of deviations: 3979126769040.0376
[2025-11-26 17:44:17] 2025-11-26 22:43:40,562 | INFO     | mean x: 1764181711.5083334
[2025-11-26 17:44:17] 2025-11-26 22:43:40,563 | INFO     | mean y: 4100925.6145833335
[2025-11-26 17:44:17] 2025-11-26 22:43:40,563 | INFO     | intersect: -204701376977.2954
[2025-11-26 17:44:17] 2025-11-26 22:43:40,563 | INFO     | chi2: 6.121172903714311
[2025-11-26 17:44:17] 2025-11-26 22:43:40,563 | INFO     | current memory leak: 116.03 B/s (using 480 data points, chi2=6.12)
[2025-11-26 17:44:17] 2025-11-26 22:43:40,564 | INFO     | could have reported an average CPU frequency of 3397 MHz (20 samples)
[2025-11-26 17:44:17] 2025-11-26 22:43:40,564 | INFO     | ..............................
[2025-11-26 17:44:17] 2025-11-26 22:43:40,564 | INFO     | . Timing measurements:
[2025-11-26 17:44:17] 2025-11-26 22:43:40,564 | INFO     | . get job = 0 s
[2025-11-26 17:44:17] 2025-11-26 22:43:40,564 | INFO     | . initial setup = 2 s
[2025-11-26 17:44:17] 2025-11-26 22:43:40,564 | INFO     | . payload setup = 8 s
[2025-11-26 17:44:17] 2025-11-26 22:43:40,564 | INFO     | . stage-in = 0 s
[2025-11-26 17:44:17] 2025-11-26 22:43:40,564 | INFO     | . payload execution = 30517 s
[2025-11-26 17:44:17] 2025-11-26 22:43:40,564 | INFO     | . stage-out = 3 s
[2025-11-26 17:44:17] 2025-11-26 22:43:40,564 | INFO     | . log creation = 0 s
[2025-11-26 17:44:17] 2025-11-26 22:43:40,564 | INFO     | ..............................
[2025-11-26 17:44:17] 2025-11-26 22:43:40,631 | INFO     | 
[2025-11-26 17:44:17] 2025-11-26 22:43:40,634 | INFO     | job summary report
[2025-11-26 17:44:17] 2025-11-26 22:43:40,634 | INFO     | --------------------------------------------------
[2025-11-26 17:44:17] 2025-11-26 22:43:40,634 | INFO     | PanDA job id: 6896713648
[2025-11-26 17:44:17] 2025-11-26 22:43:40,634 | INFO     | task id: 47556161
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | errors: (none)
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | pilot state: finished 
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | transexitcode: 0
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | exeerrorcode: 0
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | exeerrordiag: 
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | exitcode: 0
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | exitmsg: OK
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | cpuconsumptiontime: 178879 s
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | nevents: 1000
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | neventsw: 0
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | pid: 1305620
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | pgrp: 1305620
[2025-11-26 17:44:17] 2025-11-26 22:43:40,635 | INFO     | corecount: 8
[2025-11-26 17:44:17] 2025-11-26 22:43:40,636 | INFO     | event service: False
[2025-11-26 17:44:17] 2025-11-26 22:43:40,636 | INFO     | sizes: {0: 2284262, 6: 2284524, 11: 2284552, 30529: 2324326, 30533: 2333320, 30536: 2333376, 30545: 2333750}
[2025-11-26 17:44:17] 2025-11-26 22:43:40,636 | INFO     | --------------------------------------------------
[2025-11-26 17:44:17] 2025-11-26 22:43:40,636 | INFO     | 
[2025-11-26 17:44:17] 2025-11-26 22:43:40,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-26 17:44:17] 2025-11-26 22:43:40,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,663 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,663 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,663 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | job 6896713648 has completed (purged errors)
[2025-11-26 17:44:17] 2025-11-26 22:43:40,664 | INFO     | overall cleanup function is called
[2025-11-26 17:44:17] 2025-11-26 22:43:41,679 | INFO     | --- collectZombieJob: --- 10, [1305620]
[2025-11-26 17:44:17] 2025-11-26 22:43:41,681 | INFO     | zombie collector waiting for pid 1305620
[2025-11-26 17:44:17] 2025-11-26 22:43:41,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:44:17] 2025-11-26 22:43:41,681 | INFO     | collected zombie processes
[2025-11-26 17:44:17] 2025-11-26 22:43:41,681 | INFO     | will attempt to kill all subprocesses of pid=1305620
[2025-11-26 17:44:17] 2025-11-26 22:43:42,386 | INFO     | process IDs to be killed: [1305620] (in reverse order)
[2025-11-26 17:44:17] 2025-11-26 22:43:42,631 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:44:17] 2025-11-26 22:43:42,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:44:17] 2025-11-26 22:43:42,667 | INFO     | did not find any defunct processes belonging to 1305620
[2025-11-26 17:44:17] 2025-11-26 22:43:42,697 | INFO     | did not find any defunct processes belonging to 1305620
[2025-11-26 17:44:17] 2025-11-26 22:43:42,698 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:44:17] 2025-11-26 22:43:42,698 | INFO     | ready for new job
[2025-11-26 17:44:17] 2025-11-26 22:43:42,699 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:44:17] 2025-11-26 22:43:42,701 | INFO     | ***************************************
[2025-11-26 17:44:17] 2025-11-26 22:43:42,701 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:44:17] 2025-11-26 22:43:42,701 | INFO     | ***************************************
[2025-11-26 17:44:17] 2025-11-26 22:43:42,701 | INFO     | 
[2025-11-26 17:44:17] 2025-11-26 22:43:42,706 | INFO     | architecture information:
[2025-11-26 17:44:17] 2025-11-26 22:43:42,706 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:44:17] 2025-11-26 22:43:42,725 | INFO     | cat /etc/os-release:
[2025-11-26 17:44:17] NAME="CentOS Linux"
[2025-11-26 17:44:17] VERSION="7 (Core)"
[2025-11-26 17:44:17] ID="centos"
[2025-11-26 17:44:17] ID_LIKE="rhel fedora"
[2025-11-26 17:44:17] VERSION_ID="7"
[2025-11-26 17:44:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:44:17] ANSI_COLOR="0;31"
[2025-11-26 17:44:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:44:17] HOME_URL="https://www.centos.org/"
[2025-11-26 17:44:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:44:17] 
[2025-11-26 17:44:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:44:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:44:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:44:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:44:17] 
[2025-11-26 17:44:17] 2025-11-26 22:43:42,725 | INFO     | ***************************************
[2025-11-26 17:44:17] 2025-11-26 22:43:43,228 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-26 17:44:17] 2025-11-26 22:43:43,263 | INFO     | sufficient remaining disk space (62514003968 B)
[2025-11-26 17:44:17] 2025-11-26 22:43:43,264 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:44:17] 2025-11-26 22:43:43,264 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:44:17] 2025-11-26 22:43:43,264 | INFO     | update_server=False
[2025-11-26 17:44:17] 2025-11-26 22:43:43,264 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:44:17] 2025-11-26 22:43:43,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:44:17] 2025-11-26 22:43:43,264 | INFO     | aborting loop
[2025-11-26 17:44:17] 2025-11-26 22:43:43,345 | INFO     | all job control threads have been joined
[2025-11-26 17:44:17] 2025-11-26 22:43:44,029 | INFO     | all data control threads have been joined
[2025-11-26 17:44:17] 2025-11-26 22:43:44,233 | INFO     | all payload control threads have been joined
[2025-11-26 17:44:17] 2025-11-26 22:43:44,269 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:44,270 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:44,271 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:44,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:44:17] 2025-11-26 22:43:44,351 | INFO     | [job] control thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:44,479 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:44,953 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:44,986 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:45,035 | INFO     | [data] control thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:45,089 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:45,239 | INFO     | [payload] control thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:45,612 | INFO     | [job] validate thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:45,650 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:45,680 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:44:17] 2025-11-26 22:43:45,769 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:46,281 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:46,686 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:43:46,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:44:17] 2025-11-26 22:43:50,755 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:44:17] 2025-11-26 22:44:10,653 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:44:17] 2025-11-26 22:44:11,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180433463104)>', '<ExcThread(monitor, started 140180159698688)>']
[2025-11-26 17:44:17] 2025-11-26 22:44:14,340 | INFO     | PID=1279484 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:44:17] 2025-11-26 22:44:14,340 | INFO     | .. there are 81 such processes running
[2025-11-26 17:44:17] 2025-11-26 22:44:14,341 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:44:17] 2025-11-26 22:44:14,341 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:44:17] 2025-11-26 22:44:14,341 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:44:17] 2025-11-26 22:44:14,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:44:17] 2025-11-26 22:44:14,341 | INFO     | [monitor] control thread has ended
[2025-11-26 17:44:17] 2025-11-26 22:44:16,881 | INFO     | all workflow threads have been joined
[2025-11-26 17:44:17] 2025-11-26 22:44:16,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:44:17] 2025-11-26 22:44:16,882 | INFO     | traces error code: 0
[2025-11-26 17:44:17] 2025-11-26 22:44:16,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:44:17] 2025-11-26 22:44:17,174 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:44:17] 2025-11-26 22:44:17,177 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:44:17] 2025-11-26 22:44:17,180 [wrapper] pilotpid: 1279484
[2025-11-26 17:44:17] 2025-11-26 22:44:17,185 [wrapper] Pilot exit status: 0
[2025-11-26 17:44:17] 2025-11-26 22:44:17,201 [wrapper] pandaids: 6896713648
[2025-11-26 17:44:17] 2025-11-26 22:44:17,353 [wrapper] cleanup supervisor_pilot 2005858 1279485
[2025-11-26 17:44:17] 2025-11-26 22:44:17,358 [wrapper] Test setup, not cleaning
[2025-11-26 17:44:17] 2025-11-26 22:44:17,361 [wrapper] apfmon messages muted
[2025-11-26 17:44:17] 2025-11-26 22:44:17,368 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:44:17] 2025-11-26 22:44:17,372 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:44:17]  *** Error codes and diagnostics ***
[2025-11-26 17:44:17]     "exeErrorCode": 0,
[2025-11-26 17:44:17]     "exeErrorDiag": "",
[2025-11-26 17:44:17]     "pilotErrorCode": 0,
[2025-11-26 17:44:17]     "pilotErrorDiag": "",
[2025-11-26 17:44:17]  *** Listing of results directory ***
[2025-11-26 17:44:17] total 1311036
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:25 queuedata.json
[2025-11-26 17:44:17] -rwx------. 1 boincer umatlas     36292 Nov 25 00:26 runpilot2-wrapper.sh
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas       100 Nov 26 09:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:44:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 09:14 run_atlas
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas       105 Nov 26 09:14 job.xml
[2025-11-26 17:44:17] -rw-r--r--. 2 boincer umatlas 408621799 Nov 26 09:14 EVNT.47483658._002104.pool.root.1
[2025-11-26 17:44:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:14 start_atlas.sh
[2025-11-26 17:44:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 09:14 shared
[2025-11-26 17:44:17] -rw-r--r--. 2 boincer umatlas    590109 Nov 26 09:14 input.tar.gz
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas         0 Nov 26 09:14 boinc_lockfile
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 09:14 pandaJob.out
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas        57 Nov 26 09:14 setup.sh.local
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas    991830 Nov 26 09:14 agis_schedconf.cvmfs.json
[2025-11-26 17:44:17] drwx------. 5 boincer umatlas      4096 Nov 26 09:14 pilot3
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas       533 Nov 26 17:38 boinc_task_state.xml
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas      6946 Nov 26 17:40 init_data.xml
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas 918189683 Nov 26 17:42 HITS.47556161._000874.pool.root.1
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas      1078 Nov 26 17:43 memory_monitor_summary.json
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas   1516240 Nov 26 17:43 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas   1786087 Nov 26 17:43 log.47556161._000874.job.log.tgz.1
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas      8634 Nov 26 17:43 heartbeat.json
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:44 boinc_mmap_file
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:44 wrapper_checkpoint.txt
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas        95 Nov 26 17:44 pilot_heartbeat.json
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas      4824 Nov 26 17:44 pilotlog.txt
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas   4096794 Nov 26 17:44 log.47556161._000874.job.log.1
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas       353 Nov 26 17:44 output.list
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:44 runtime_log
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas   5898240 Nov 26 17:44 result.tar.gz
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 17:44 runtime_log.err
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas       664 Nov 26 17:44 h13MDmek0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8LJKDmAJTMFm.diag
[2025-11-26 17:44:17] -rw-r--r--. 1 boincer umatlas     21527 Nov 26 17:44 stderr.txt
[2025-11-26 17:44:17] HITS file was successfully produced:
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas 918189683 Nov 26 17:42 shared/HITS.pool.root.1
[2025-11-26 17:44:17]  *** Contents of shared directory: ***
[2025-11-26 17:44:17] total 1302084
[2025-11-26 17:44:17] -rw-r--r--. 2 boincer umatlas 408621799 Nov 26 09:14 ATLAS.root_0
[2025-11-26 17:44:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:14 start_atlas.sh
[2025-11-26 17:44:17] -rw-r--r--. 2 boincer umatlas    590109 Nov 26 09:14 input.tar.gz
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas 918189683 Nov 26 17:42 HITS.pool.root.1
[2025-11-26 17:44:17] -rw-------. 1 boincer umatlas   5898240 Nov 26 17:44 result.tar.gz
17:44:19 (1272979): run_atlas exited; CPU time 179585.449665
17:44:19 (1272979): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN