Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:00:11 (1647151): wrapper (7.7.26015): starting
10:00:11 (1647151): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 10:00:11] Arguments: --nthreads 8
[2025-11-26 10:00:11] Threads: 8
[2025-11-26 10:00:11] Checking for CVMFS
[2025-11-26 10:00:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:00:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:00:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:00:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:00:14] 2.13.3.0 11322 30202 250556 153324 0 579 26730829 32935936 23898 16776704 0 52492430 99.588 54383251 39758 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 10:00:14] CVMFS is ok
[2025-11-26 10:00:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:00:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:00:14] Further information can be found at the LHC@home message board.
[2025-11-26 10:00:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:00:14] Checking for apptainer binary...
[2025-11-26 10:00:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:00:14] Running /usr/bin/apptainer --version
[2025-11-26 10:00:14] apptainer version 1.4.4-1.el9
[2025-11-26 10:00:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:00:14] c6-1-26-4.aglt2.org
[2025-11-26 10:00:14] apptainer works
[2025-11-26 10:00:14] Set ATHENA_PROC_NUMBER=8
[2025-11-26 10:00:14] Set ATHENA_CORE_NUMBER=8
[2025-11-26 10:00:14] Starting ATLAS job with PandaID=6897881090
[2025-11-26 10:00:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:42:39]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:42:39] 2025-11-27 09:42:02,004 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 04:42:39] 2025-11-27 09:42:02,008 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2836.4171428571417
[2025-11-27 04:42:39] 2025-11-27 09:42:02,025 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6897881090/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:42:39] 2025-11-27 09:42:02,026 | INFO     | extracted standard info from prmon json
[2025-11-27 04:42:39] 2025-11-27 09:42:02,026 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:42:39] 2025-11-27 09:42:02,026 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:42:39] 2025-11-27 09:42:02,132 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:42:39] 2025-11-27 09:42:02,135 | INFO     | sum of square deviations: 412722166628.63666
[2025-11-27 04:42:39] 2025-11-27 09:42:02,377 | INFO     | sum of deviations: 2652033012484.4814
[2025-11-27 04:42:39] 2025-11-27 09:42:02,397 | INFO     | mean x: 1764202933.918182
[2025-11-27 04:42:39] 2025-11-27 09:42:02,397 | INFO     | mean y: 2891881.660909091
[2025-11-27 04:42:39] 2025-11-27 09:42:02,398 | INFO     | intersect: -11333364805.717035
[2025-11-27 04:42:39] 2025-11-27 09:42:02,399 | INFO     | chi2: 14.746605836586838
[2025-11-27 04:42:39] 2025-11-27 09:42:02,400 | INFO     | sum of square deviations: 407120107485.3818
[2025-11-27 04:42:39] 2025-11-27 09:42:02,522 | INFO     | monitor loop #4315: job 0:6897881090 is in state 'finished'
[2025-11-27 04:42:39] 2025-11-27 09:42:02,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:42:39] 2025-11-27 09:42:02,525 | INFO     | sum of deviations: 3020590784264.1094
[2025-11-27 04:42:39] 2025-11-27 09:42:02,525 | INFO     | mean x: 1764202781.4237442
[2025-11-27 04:42:39] 2025-11-27 09:42:02,525 | INFO     | mean y: 2901913.37260274
[2025-11-27 04:42:39] 2025-11-27 09:42:02,525 | INFO     | intersect: -13086440924.681679
[2025-11-27 04:42:39] 2025-11-27 09:42:02,547 | INFO     | time since job start (67247s) is within the limit (172800.0s)
[2025-11-27 04:42:39] 2025-11-27 09:42:02,548 | INFO     | chi2: 11.59029808597789
[2025-11-27 04:42:39] 2025-11-27 09:42:02,548 | INFO     | current chi2=11.59029808597789 (change=21.403621861093207 %)
[2025-11-27 04:42:39] 2025-11-27 09:42:02,548 | INFO     | right removable region: 1094
[2025-11-27 04:42:39] 2025-11-27 09:42:02,549 | INFO     | sum of square deviations: 407119222983.5343
[2025-11-27 04:42:39] 2025-11-27 09:42:02,665 | INFO     | sum of deviations: 2221131380693.9346
[2025-11-27 04:42:39] 2025-11-27 09:42:02,665 | INFO     | mean x: 1764203086.4246576
[2025-11-27 04:42:39] 2025-11-27 09:42:02,665 | INFO     | mean y: 2903607.2840182646
[2025-11-27 04:42:39] 2025-11-27 09:42:02,665 | INFO     | intersect: -9622106993.930906
[2025-11-27 04:42:39] 2025-11-27 09:42:02,667 | INFO     | chi2: 10.798219262832744
[2025-11-27 04:42:39] 2025-11-27 09:42:02,667 | INFO     | current chi2=10.798219262832744 (change=26.774883776699387 %)
[2025-11-27 04:42:39] 2025-11-27 09:42:02,743 | INFO     | sum of square deviations: 401567210525.8386
[2025-11-27 04:42:39] 2025-11-27 09:42:02,896 | INFO     | sum of deviations: 1852728388651.9585
[2025-11-27 04:42:39] 2025-11-27 09:42:02,896 | INFO     | mean x: 1764203238.9311926
[2025-11-27 04:42:39] 2025-11-27 09:42:02,896 | INFO     | mean y: 2913722.4394495413
[2025-11-27 04:42:39] 2025-11-27 09:42:02,896 | INFO     | intersect: -8136668739.583403
[2025-11-27 04:42:39] 2025-11-27 09:42:02,898 | INFO     | chi2: 7.9849708024991894
[2025-11-27 04:42:39] 2025-11-27 09:42:02,918 | INFO     | current chi2=7.9849708024991894 (change=26.052892535871162 %)
[2025-11-27 04:42:39] 2025-11-27 09:42:02,920 | INFO     | sum of square deviations: 396066095678.66943
[2025-11-27 04:42:39] 2025-11-27 09:42:03,039 | INFO     | sum of deviations: 1735973812167.318
[2025-11-27 04:42:39] 2025-11-27 09:42:03,040 | INFO     | mean x: 1764203391.435023
[2025-11-27 04:42:39] 2025-11-27 09:42:03,040 | INFO     | mean y: 2916955.4442396313
[2025-11-27 04:42:39] 2025-11-27 09:42:03,040 | INFO     | intersect: -7729658289.654955
[2025-11-27 04:42:39] 2025-11-27 09:42:03,041 | INFO     | chi2: 7.705560142269532
[2025-11-27 04:42:39] 2025-11-27 09:42:03,041 | INFO     | current chi2=7.705560142269532 (change=3.499207037077772 %)
[2025-11-27 04:42:39] 2025-11-27 09:42:03,041 | INFO     | left removable region: 30
[2025-11-27 04:42:39] 2025-11-27 09:42:03,064 | INFO     | sum of square deviations: 373511813096.7811
[2025-11-27 04:42:39] 2025-11-27 09:42:03,164 | INFO     | sum of deviations: 1987505387573.8186
[2025-11-27 04:42:39] 2025-11-27 09:42:03,188 | INFO     | mean x: 1764203665.93703
[2025-11-27 04:42:39] 2025-11-27 09:42:03,189 | INFO     | mean y: 2935188.385338346
[2025-11-27 04:42:39] 2025-11-27 09:42:03,189 | INFO     | intersect: -9384624101.25563
[2025-11-27 04:42:39] 2025-11-27 09:42:03,199 | INFO     | chi2: 3.638158489497659
[2025-11-27 04:42:39] 2025-11-27 09:42:03,199 | INFO     | current memory leak: 5.32 B/s (using 1064 data points, chi2=3.64)
[2025-11-27 04:42:39] 2025-11-27 09:42:03,205 | INFO     | could have reported an average CPU frequency of 2927 MHz (40 samples)
[2025-11-27 04:42:39] 2025-11-27 09:42:03,205 | INFO     | ..............................
[2025-11-27 04:42:39] 2025-11-27 09:42:03,205 | INFO     | . Timing measurements:
[2025-11-27 04:42:39] 2025-11-27 09:42:03,205 | INFO     | . get job = 0 s
[2025-11-27 04:42:39] 2025-11-27 09:42:03,205 | INFO     | . initial setup = 6 s
[2025-11-27 04:42:39] 2025-11-27 09:42:03,205 | INFO     | . payload setup = 43 s
[2025-11-27 04:42:39] 2025-11-27 09:42:03,205 | INFO     | . stage-in = 0 s
[2025-11-27 04:42:39] 2025-11-27 09:42:03,205 | INFO     | . payload execution = 67097 s
[2025-11-27 04:42:39] 2025-11-27 09:42:03,205 | INFO     | . stage-out = 9 s
[2025-11-27 04:42:39] 2025-11-27 09:42:03,206 | INFO     | . log creation = 1 s
[2025-11-27 04:42:39] 2025-11-27 09:42:03,206 | INFO     | ..............................
[2025-11-27 04:42:39] 2025-11-27 09:42:03,621 | INFO     | 
[2025-11-27 04:42:39] 2025-11-27 09:42:03,621 | INFO     | job summary report
[2025-11-27 04:42:39] 2025-11-27 09:42:03,621 | INFO     | --------------------------------------------------
[2025-11-27 04:42:39] 2025-11-27 09:42:03,621 | INFO     | PanDA job id: 6897881090
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | task id: 47556173
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | errors: (none)
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | pilot state: finished 
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | transexitcode: 0
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | exeerrorcode: 0
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | exeerrordiag: 
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | exitcode: 0
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | exitmsg: OK
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | cpuconsumptiontime: 239119 s
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | nevents: 1000
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | neventsw: 0
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | pid: 1661738
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | pgrp: 1661738
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | corecount: 8
[2025-11-27 04:42:39] 2025-11-27 09:42:03,622 | INFO     | event service: False
[2025-11-27 04:42:39] 2025-11-27 09:42:03,623 | INFO     | sizes: {0: 2283434, 1: 2284119, 2: 2284318, 13: 2284318, 24: 2284374, 31: 2284664, 35: 2284820, 67146: 2339926, 67147: 2339925, 67157: 2349003, 67160: 2349059, 671
[2025-11-27 04:42:39] 2025-11-27 09:42:03,623 | INFO     | --------------------------------------------------
[2025-11-27 04:42:39] 2025-11-27 09:42:03,623 | INFO     | 
[2025-11-27 04:42:39] 2025-11-27 09:42:03,623 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 04:42:39] 2025-11-27 09:42:03,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,752 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,752 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:42:39] 2025-11-27 09:42:03,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:42:39] 2025-11-27 09:42:03,752 | INFO     | job 6897881090 has completed (purged errors)
[2025-11-27 04:42:39] 2025-11-27 09:42:03,752 | INFO     | overall cleanup function is called
[2025-11-27 04:42:39] 2025-11-27 09:42:04,780 | INFO     | --- collectZombieJob: --- 10, [1661738]
[2025-11-27 04:42:39] 2025-11-27 09:42:04,781 | INFO     | zombie collector waiting for pid 1661738
[2025-11-27 04:42:39] 2025-11-27 09:42:04,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:42:39] 2025-11-27 09:42:04,781 | INFO     | collected zombie processes
[2025-11-27 04:42:39] 2025-11-27 09:42:04,781 | INFO     | will attempt to kill all subprocesses of pid=1661738
[2025-11-27 04:42:39] 2025-11-27 09:42:06,643 | INFO     | process IDs to be killed: [1661738] (in reverse order)
[2025-11-27 04:42:39] 2025-11-27 09:42:06,931 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:42:39] 2025-11-27 09:42:06,932 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:42:39] 2025-11-27 09:42:06,963 | INFO     | did not find any defunct processes belonging to 1661738
[2025-11-27 04:42:39] 2025-11-27 09:42:06,990 | INFO     | did not find any defunct processes belonging to 1661738
[2025-11-27 04:42:39] 2025-11-27 09:42:06,991 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:42:39] 2025-11-27 09:42:06,991 | INFO     | ready for new job
[2025-11-27 04:42:39] 2025-11-27 09:42:06,991 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:42:39] 2025-11-27 09:42:06,996 | INFO     | ***************************************
[2025-11-27 04:42:39] 2025-11-27 09:42:06,997 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:42:39] 2025-11-27 09:42:06,997 | INFO     | ***************************************
[2025-11-27 04:42:39] 2025-11-27 09:42:06,997 | INFO     | 
[2025-11-27 04:42:39] 2025-11-27 09:42:07,000 | INFO     | architecture information:
[2025-11-27 04:42:39] 2025-11-27 09:42:07,004 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:42:39] 2025-11-27 09:42:07,035 | INFO     | cat /etc/os-release:
[2025-11-27 04:42:39] NAME="CentOS Linux"
[2025-11-27 04:42:39] VERSION="7 (Core)"
[2025-11-27 04:42:39] ID="centos"
[2025-11-27 04:42:39] ID_LIKE="rhel fedora"
[2025-11-27 04:42:39] VERSION_ID="7"
[2025-11-27 04:42:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:42:39] ANSI_COLOR="0;31"
[2025-11-27 04:42:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:42:39] HOME_URL="https://www.centos.org/"
[2025-11-27 04:42:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:42:39] 
[2025-11-27 04:42:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:42:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:42:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:42:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:42:39] 
[2025-11-27 04:42:39] 2025-11-27 09:42:07,035 | INFO     | ***************************************
[2025-11-27 04:42:39] 2025-11-27 09:42:07,540 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 04:42:39] 2025-11-27 09:42:07,606 | INFO     | sufficient remaining disk space (71168950272 B)
[2025-11-27 04:42:39] 2025-11-27 09:42:07,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:42:39] 2025-11-27 09:42:07,607 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:42:39] 2025-11-27 09:42:07,607 | INFO     | update_server=False
[2025-11-27 04:42:39] 2025-11-27 09:42:07,607 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:42:39] 2025-11-27 09:42:07,787 | INFO     | all data control threads have been joined
[2025-11-27 04:42:39] 2025-11-27 09:42:08,451 | INFO     | all payload control threads have been joined
[2025-11-27 04:42:39] 2025-11-27 09:42:08,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:42:39] 2025-11-27 09:42:08,609 | INFO     | aborting loop
[2025-11-27 04:42:39] 2025-11-27 09:42:08,613 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:08,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:42:39] 2025-11-27 09:42:08,793 | INFO     | [data] control thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:08,852 | INFO     | all job control threads have been joined
[2025-11-27 04:42:39] 2025-11-27 09:42:08,934 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:42:39] 2025-11-27 09:42:08,987 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:09,277 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:09,289 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:09,457 | INFO     | [payload] control thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:09,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:09,640 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:09,648 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:09,655 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:09,656 | INFO     | [job] validate thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:09,715 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:09,858 | INFO     | [job] control thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:10,138 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:10,941 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:11,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:42:39] 2025-11-27 09:42:11,823 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:42:39] 2025-11-27 09:42:15,129 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:42:39] 2025-11-27 09:42:16,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631315257152)>', '<ExcThread(monitor, started 139630527641344)>']
[2025-11-27 04:42:39] 2025-11-27 09:42:21,945 | INFO     | all workflow threads have been joined
[2025-11-27 04:42:39] 2025-11-27 09:42:21,945 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:42:39] 2025-11-27 09:42:21,946 | INFO     | traces error code: 0
[2025-11-27 04:42:39] 2025-11-27 09:42:21,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:42:39] 2025-11-27 09:42:38,220 | INFO     | PID=1651870 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:42:39] 2025-11-27 09:42:38,222 | INFO     | .. there are 32 such processes running
[2025-11-27 04:42:39] 2025-11-27 09:42:38,223 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:42:39] 2025-11-27 09:42:38,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:42:39] 2025-11-27 09:42:38,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:42:39] 2025-11-27 09:42:38,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:42:39] 2025-11-27 09:42:38,223 | INFO     | [monitor] control thread has ended
[2025-11-27 04:42:39] 2025-11-27 09:42:38,444 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:42:39] 2025-11-27 09:42:38,483 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:42:39] 2025-11-27 09:42:38,546 [wrapper] pilotpid: 1651870
[2025-11-27 04:42:39] 2025-11-27 09:42:38,551 [wrapper] Pilot exit status: 0
[2025-11-27 04:42:39] 2025-11-27 09:42:38,594 [wrapper] pandaids: 6897881090
[2025-11-27 04:42:39] 2025-11-27 09:42:38,717 [wrapper] cleanup supervisor_pilot 1225292 1651871
[2025-11-27 04:42:39] 2025-11-27 09:42:38,722 [wrapper] Test setup, not cleaning
[2025-11-27 04:42:39] 2025-11-27 09:42:38,725 [wrapper] apfmon messages muted
[2025-11-27 04:42:39] 2025-11-27 09:42:38,728 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:42:39] 2025-11-27 09:42:38,731 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:42:39]  *** Error codes and diagnostics ***
[2025-11-27 04:42:39]     "exeErrorCode": 0,
[2025-11-27 04:42:39]     "exeErrorDiag": "",
[2025-11-27 04:42:39]     "pilotErrorCode": 0,
[2025-11-27 04:42:39]     "pilotErrorDiag": "",
[2025-11-27 04:42:39]  *** Listing of results directory ***
[2025-11-27 04:42:39] total 1315696
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 20:56 queuedata.json
[2025-11-27 04:42:39] -rwx------. 1 boincer umatlas     36292 Nov 25 20:58 runpilot2-wrapper.sh
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas       100 Nov 26 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:42:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 10:00 run_atlas
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas       105 Nov 26 10:00 job.xml
[2025-11-27 04:42:39] -rw-r--r--. 2 boincer umatlas 409256056 Nov 26 10:00 EVNT.47483658._003141.pool.root.1
[2025-11-27 04:42:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:00 start_atlas.sh
[2025-11-27 04:42:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 10:00 shared
[2025-11-27 04:42:39] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 10:00 input.tar.gz
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas         0 Nov 26 10:00 boinc_lockfile
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 10:00 pandaJob.out
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas        57 Nov 26 10:00 setup.sh.local
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas    992360 Nov 26 10:01 agis_schedconf.cvmfs.json
[2025-11-27 04:42:39] drwx------. 5 boincer umatlas      4096 Nov 26 10:01 pilot3
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas       533 Nov 27 04:22 boinc_task_state.xml
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas      6846 Nov 27 04:39 init_data.xml
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas 911854862 Nov 27 04:40 HITS.47556173._000996.pool.root.1
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas      1058 Nov 27 04:41 memory_monitor_summary.json
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas   1516240 Nov 27 04:41 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas   2253226 Nov 27 04:41 log.47556173._000996.job.log.tgz.1
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas      7946 Nov 27 04:42 heartbeat.json
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 04:42 boinc_mmap_file
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas        95 Nov 27 04:42 pilot_heartbeat.json
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas       823 Nov 27 04:42 pilotlog.txt
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas        29 Nov 27 04:42 wrapper_checkpoint.txt
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas   8869270 Nov 27 04:42 log.47556173._000996.job.log.1
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas       353 Nov 27 04:42 output.list
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas       620 Nov 27 04:42 runtime_log
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas  11141120 Nov 27 04:42 result.tar.gz
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 04:42 runtime_log.err
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas       661 Nov 27 04:42 DWHMDmAzJi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4gMKDmDXOHOn.diag
[2025-11-27 04:42:39] -rw-r--r--. 1 boincer umatlas     21386 Nov 27 04:42 stderr.txt
[2025-11-27 04:42:39] HITS file was successfully produced:
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas 911854862 Nov 27 04:40 shared/HITS.pool.root.1
[2025-11-27 04:42:39]  *** Contents of shared directory: ***
[2025-11-27 04:42:39] total 1301636
[2025-11-27 04:42:39] -rw-r--r--. 2 boincer umatlas 409256056 Nov 26 10:00 ATLAS.root_0
[2025-11-27 04:42:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:00 start_atlas.sh
[2025-11-27 04:42:39] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 10:00 input.tar.gz
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas 911854862 Nov 27 04:40 HITS.pool.root.1
[2025-11-27 04:42:39] -rw-------. 1 boincer umatlas  11141120 Nov 27 04:42 result.tar.gz
04:42:41 (1647151): run_atlas exited; CPU time 240936.378273
04:42:41 (1647151): called boinc_finish(0)

</stderr_txt>
]]>

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