Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:17:28 (7374): wrapper (7.7.26015): starting
09:17:28 (7374): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 09:17:28] Arguments: --nthreads 8
[2025-11-26 09:17:28] Threads: 8
[2025-11-26 09:17:28] Checking for CVMFS
[2025-11-26 09:17:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:17:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:17:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:17:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:17:28] 2.11.2.0 2822 73408 83872 153324 3 9 10641037 20275200 1 130560 0 20808465 99.846 4702809 32437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 09:17:28] CVMFS is ok
[2025-11-26 09:17:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:17:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:17:28] Further information can be found at the LHC@home message board.
[2025-11-26 09:17:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:17:28] Checking for apptainer binary...
[2025-11-26 09:17:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:17:28] Running /usr/bin/apptainer --version
[2025-11-26 09:17:28] apptainer version 1.3.2-1.el7
[2025-11-26 09:17:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:17:30] c-204-37.aglt2.org
[2025-11-26 09:17:31] apptainer works
[2025-11-26 09:17:31] Set ATHENA_PROC_NUMBER=8
[2025-11-26 09:17:31] Set ATHENA_CORE_NUMBER=8
[2025-11-26 09:17:31] Starting ATLAS job with PandaID=6891565362
[2025-11-26 09:17:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:49:07]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:49:07] 2025-11-27 02:48:28,913 | INFO     | time since job start (45041s) is within the limit (172800.0s)
[2025-11-26 21:49:07] 2025-11-27 02:48:30,916 | INFO     | time since job start (45043s) is within the limit (172800.0s)
[2025-11-26 21:49:07] 2025-11-27 02:48:31,301 | INFO     | monitor loop #3284: job 0:6891565362 is in state 'finished'
[2025-11-26 21:49:07] 2025-11-27 02:48:31,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:49:07] 2025-11-27 02:48:32,211 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 21:49:07] 2025-11-27 02:48:32,214 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1845.75
[2025-11-26 21:49:07] 2025-11-27 02:48:32,216 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891565362/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:49:07] 2025-11-27 02:48:32,217 | INFO     | extracted standard info from prmon json
[2025-11-26 21:49:07] 2025-11-27 02:48:32,217 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:49:07] 2025-11-27 02:48:32,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:49:07] 2025-11-27 02:48:32,229 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:49:07] 2025-11-27 02:48:32,230 | INFO     | sum of square deviations: 124637161839.17735
[2025-11-26 21:49:07] 2025-11-27 02:48:32,241 | INFO     | sum of deviations: 729889018748.1998
[2025-11-26 21:49:07] 2025-11-27 02:48:32,241 | INFO     | mean x: 1764189179.1368563
[2025-11-26 21:49:07] 2025-11-27 02:48:32,241 | INFO     | mean y: 2869817.0772357723
[2025-11-26 21:49:07] 2025-11-27 02:48:32,241 | INFO     | intersect: -10328417335.52896
[2025-11-26 21:49:07] 2025-11-27 02:48:32,242 | INFO     | chi2: 5.61117497588605
[2025-11-26 21:49:07] 2025-11-27 02:48:32,243 | INFO     | sum of square deviations: 122121155684.63565
[2025-11-26 21:49:07] 2025-11-27 02:48:32,254 | INFO     | sum of deviations: 939295292867.0614
[2025-11-26 21:49:07] 2025-11-27 02:48:32,254 | INFO     | mean x: 1764189026.6412005
[2025-11-26 21:49:07] 2025-11-27 02:48:32,254 | INFO     | mean y: 2882503.110504775
[2025-11-26 21:49:07] 2025-11-27 02:48:32,254 | INFO     | intersect: -13566383519.322704
[2025-11-26 21:49:07] 2025-11-27 02:48:32,255 | INFO     | chi2: 3.2715415557307588
[2025-11-26 21:49:07] 2025-11-27 02:48:32,255 | INFO     | current chi2=3.2715415557307588 (change=41.6959626140663 %)
[2025-11-26 21:49:07] 2025-11-27 02:48:32,256 | INFO     | sum of square deviations: 119639243192.56589
[2025-11-26 21:49:07] 2025-11-27 02:48:32,267 | INFO     | sum of deviations: 1045483174115.9011
[2025-11-26 21:49:07] 2025-11-27 02:48:32,267 | INFO     | mean x: 1764188874.1456044
[2025-11-26 21:49:07] 2025-11-27 02:48:32,267 | INFO     | mean y: 2889022.9065934066
[2025-11-26 21:49:07] 2025-11-27 02:48:32,267 | INFO     | intersect: -15413706190.028631
[2025-11-26 21:49:07] 2025-11-27 02:48:32,268 | INFO     | chi2: 2.5725876738635636
[2025-11-26 21:49:07] 2025-11-27 02:48:32,268 | INFO     | current chi2=2.5725876738635636 (change=21.364664637771078 %)
[2025-11-26 21:49:07] 2025-11-27 02:48:32,269 | INFO     | right removable region: 727
[2025-11-26 21:49:07] 2025-11-27 02:48:32,269 | INFO     | sum of square deviations: 122120868984.6357
[2025-11-26 21:49:07] 2025-11-27 02:48:32,280 | INFO     | sum of deviations: 528436646340.0528
[2025-11-26 21:49:07] 2025-11-27 02:48:32,280 | INFO     | mean x: 1764189331.6412005
[2025-11-26 21:49:07] 2025-11-27 02:48:32,280 | INFO     | mean y: 2882004.984993179
[2025-11-26 21:49:07] 2025-11-27 02:48:32,281 | INFO     | intersect: -7631049047.689266
[2025-11-26 21:49:07] 2025-11-27 02:48:32,281 | INFO     | chi2: 3.3101632310965776
[2025-11-26 21:49:07] 2025-11-27 02:48:32,282 | INFO     | current chi2=3.3101632310965776 (change=41.00766336245154 %)
[2025-11-26 21:49:07] 2025-11-27 02:48:32,282 | INFO     | sum of square deviations: 119638803810.42696
[2025-11-26 21:49:07] 2025-11-27 02:48:32,293 | INFO     | sum of deviations: 484825584133.133
[2025-11-26 21:49:07] 2025-11-27 02:48:32,293 | INFO     | mean x: 1764189484.1414835
[2025-11-26 21:49:07] 2025-11-27 02:48:32,293 | INFO     | mean y: 2884682.989010989
[2025-11-26 21:49:07] 2025-11-27 02:48:32,293 | INFO     | intersect: -7146335887.000345
[2025-11-26 21:49:07] 2025-11-27 02:48:32,294 | INFO     | chi2: 3.259914142228346
[2025-11-26 21:49:07] 2025-11-27 02:48:32,294 | INFO     | current chi2=3.259914142228346 (change=1.5180245009121531 %)
[2025-11-26 21:49:07] 2025-11-27 02:48:32,295 | INFO     | left removable region: 20
[2025-11-26 21:49:07] 2025-11-27 02:48:32,295 | INFO     | sum of square deviations: 109581514142.40414
[2025-11-26 21:49:07] 2025-11-27 02:48:32,305 | INFO     | sum of deviations: 757675108244.5997
[2025-11-26 21:49:07] 2025-11-27 02:48:32,306 | INFO     | mean x: 1764189453.652051
[2025-11-26 21:49:07] 2025-11-27 02:48:32,306 | INFO     | mean y: 2908251.8967468175
[2025-11-26 21:49:07] 2025-11-27 02:48:32,306 | INFO     | intersect: -12195156775.045149
[2025-11-26 21:49:07] 2025-11-27 02:48:32,307 | INFO     | chi2: 0.15875191838324226
[2025-11-26 21:49:07] 2025-11-27 02:48:32,307 | INFO     | current memory leak: 6.91 B/s (using 707 data points, chi2=0.16)
[2025-11-26 21:49:07] 2025-11-27 02:48:32,308 | INFO     | could have reported an average CPU frequency of 2182 MHz (28 samples)
[2025-11-26 21:49:07] 2025-11-27 02:48:32,308 | INFO     | ..............................
[2025-11-26 21:49:07] 2025-11-27 02:48:32,308 | INFO     | . Timing measurements:
[2025-11-26 21:49:07] 2025-11-27 02:48:32,308 | INFO     | . get job = 0 s
[2025-11-26 21:49:07] 2025-11-27 02:48:32,308 | INFO     | . initial setup = 3 s
[2025-11-26 21:49:07] 2025-11-27 02:48:32,308 | INFO     | . payload setup = 9 s
[2025-11-26 21:49:07] 2025-11-27 02:48:32,309 | INFO     | . stage-in = 0 s
[2025-11-26 21:49:07] 2025-11-27 02:48:32,309 | INFO     | . payload execution = 45001 s
[2025-11-26 21:49:07] 2025-11-27 02:48:32,309 | INFO     | . stage-out = 3 s
[2025-11-26 21:49:07] 2025-11-27 02:48:32,309 | INFO     | . log creation = 0 s
[2025-11-26 21:49:07] 2025-11-27 02:48:32,309 | INFO     | ..............................
[2025-11-26 21:49:07] 2025-11-27 02:48:32,397 | INFO     | 
[2025-11-26 21:49:07] 2025-11-27 02:48:32,397 | INFO     | job summary report
[2025-11-26 21:49:07] 2025-11-27 02:48:32,397 | INFO     | --------------------------------------------------
[2025-11-26 21:49:07] 2025-11-27 02:48:32,397 | INFO     | PanDA job id: 6891565362
[2025-11-26 21:49:07] 2025-11-27 02:48:32,397 | INFO     | task id: 47493068
[2025-11-26 21:49:07] 2025-11-27 02:48:32,397 | INFO     | errors: (none)
[2025-11-26 21:49:07] 2025-11-27 02:48:32,397 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:49:07] 2025-11-27 02:48:32,397 | INFO     | pilot state: finished 
[2025-11-26 21:49:07] 2025-11-27 02:48:32,398 | INFO     | transexitcode: 0
[2025-11-26 21:49:07] 2025-11-27 02:48:32,398 | INFO     | exeerrorcode: 0
[2025-11-26 21:49:07] 2025-11-27 02:48:32,398 | INFO     | exeerrordiag: 
[2025-11-26 21:49:07] 2025-11-27 02:48:32,398 | INFO     | exitcode: 0
[2025-11-26 21:49:07] 2025-11-27 02:48:32,398 | INFO     | exitmsg: OK
[2025-11-26 21:49:07] 2025-11-27 02:48:32,398 | INFO     | cpuconsumptiontime: 349073 s
[2025-11-26 21:49:07] 2025-11-27 02:48:32,398 | INFO     | nevents: 1000
[2025-11-26 21:49:07] 2025-11-27 02:48:32,398 | INFO     | neventsw: 0
[2025-11-26 21:49:07] 2025-11-27 02:48:32,399 | INFO     | pid: 18725
[2025-11-26 21:49:07] 2025-11-27 02:48:32,399 | INFO     | pgrp: 18725
[2025-11-26 21:49:07] 2025-11-27 02:48:32,399 | INFO     | corecount: 8
[2025-11-26 21:49:07] 2025-11-27 02:48:32,399 | INFO     | event service: False
[2025-11-26 21:49:07] 2025-11-27 02:48:32,399 | INFO     | sizes: {0: 2284304, 5: 2284566, 11: 2284622, 45014: 2330482, 45015: 2330481, 45020: 2339715, 45027: 2339905}
[2025-11-26 21:49:07] 2025-11-27 02:48:32,399 | INFO     | --------------------------------------------------
[2025-11-26 21:49:07] 2025-11-27 02:48:32,399 | INFO     | 
[2025-11-26 21:49:07] 2025-11-27 02:48:32,399 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 21:49:07] 2025-11-27 02:48:32,426 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,427 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,429 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,429 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:49:07] 2025-11-27 02:48:32,429 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,429 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:49:07] 2025-11-27 02:48:32,429 | INFO     | job 6891565362 has completed (purged errors)
[2025-11-26 21:49:07] 2025-11-27 02:48:32,429 | INFO     | overall cleanup function is called
[2025-11-26 21:49:07] 2025-11-27 02:48:33,443 | INFO     | --- collectZombieJob: --- 10, [18725]
[2025-11-26 21:49:07] 2025-11-27 02:48:33,443 | INFO     | zombie collector waiting for pid 18725
[2025-11-26 21:49:07] 2025-11-27 02:48:33,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:49:07] 2025-11-27 02:48:33,444 | INFO     | collected zombie processes
[2025-11-26 21:49:07] 2025-11-27 02:48:33,444 | INFO     | will attempt to kill all subprocesses of pid=18725
[2025-11-26 21:49:07] 2025-11-27 02:48:33,532 | INFO     | process IDs to be killed: [18725] (in reverse order)
[2025-11-26 21:49:07] 2025-11-27 02:48:33,590 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:49:07] 2025-11-27 02:48:33,591 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:49:07] 2025-11-27 02:48:33,595 | INFO     | did not find any defunct processes belonging to 18725
[2025-11-26 21:49:07] 2025-11-27 02:48:33,599 | INFO     | did not find any defunct processes belonging to 18725
[2025-11-26 21:49:07] 2025-11-27 02:48:33,601 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:49:07] 2025-11-27 02:48:33,601 | INFO     | ready for new job
[2025-11-26 21:49:07] 2025-11-27 02:48:33,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:49:07] 2025-11-27 02:48:33,605 | INFO     | ***************************************
[2025-11-26 21:49:07] 2025-11-27 02:48:33,605 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:49:07] 2025-11-27 02:48:33,605 | INFO     | ***************************************
[2025-11-26 21:49:07] 2025-11-27 02:48:33,605 | INFO     | 
[2025-11-26 21:49:07] 2025-11-27 02:48:33,605 | INFO     | architecture information:
[2025-11-26 21:49:07] 2025-11-27 02:48:33,606 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:49:07] 2025-11-27 02:48:33,624 | INFO     | cat /etc/os-release:
[2025-11-26 21:49:07] NAME="CentOS Linux"
[2025-11-26 21:49:07] VERSION="7 (Core)"
[2025-11-26 21:49:07] ID="centos"
[2025-11-26 21:49:07] ID_LIKE="rhel fedora"
[2025-11-26 21:49:07] VERSION_ID="7"
[2025-11-26 21:49:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:49:07] ANSI_COLOR="0;31"
[2025-11-26 21:49:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:49:07] HOME_URL="https://www.centos.org/"
[2025-11-26 21:49:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:49:07] 
[2025-11-26 21:49:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:49:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:49:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:49:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:49:07] 
[2025-11-26 21:49:07] 2025-11-27 02:48:33,625 | INFO     | ***************************************
[2025-11-26 21:49:07] 2025-11-27 02:48:34,129 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 21:49:07] 2025-11-27 02:48:34,150 | INFO     | sufficient remaining disk space (17437818880 B)
[2025-11-26 21:49:07] 2025-11-27 02:48:34,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:49:07] 2025-11-27 02:48:34,151 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:49:07] 2025-11-27 02:48:34,151 | INFO     | update_server=False
[2025-11-26 21:49:07] 2025-11-27 02:48:34,151 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:49:07] 2025-11-27 02:48:34,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:49:07] 2025-11-27 02:48:34,771 | INFO     | all data control threads have been joined
[2025-11-26 21:49:07] 2025-11-27 02:48:34,771 | INFO     | all job control threads have been joined
[2025-11-26 21:49:07] 2025-11-27 02:48:34,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:49:07] 2025-11-27 02:48:34,814 | INFO     | aborting loop
[2025-11-26 21:49:07] 2025-11-27 02:48:35,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:49:07] 2025-11-27 02:48:35,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:49:07] 2025-11-27 02:48:35,157 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:35,157 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:35,252 | INFO     | all payload control threads have been joined
[2025-11-26 21:49:07] 2025-11-27 02:48:35,291 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:35,407 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:35,775 | INFO     | [job] control thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:35,776 | INFO     | [data] control thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:35,817 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:35,820 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:35,902 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:35,979 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:36,199 | INFO     | [job] validate thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:36,253 | INFO     | [payload] control thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:36,512 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:36,594 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:37,053 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:48:39,134 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:49:07] 2025-11-27 02:49:01,771 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:49:07] 2025-11-27 02:49:02,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731107333952)>', '<ExcThread(monitor, started 139730452739840)>']
[2025-11-26 21:49:07] 2025-11-27 02:49:04,092 | INFO     | PID=12177 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 21:49:07] 2025-11-27 02:49:04,093 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:49:07] 2025-11-27 02:49:04,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:49:07] 2025-11-27 02:49:04,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:49:07] 2025-11-27 02:49:04,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:49:07] 2025-11-27 02:49:04,093 | INFO     | [monitor] control thread has ended
[2025-11-26 21:49:07] 2025-11-27 02:49:07,469 | INFO     | all workflow threads have been joined
[2025-11-26 21:49:07] 2025-11-27 02:49:07,469 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:49:07] 2025-11-27 02:49:07,469 | INFO     | traces error code: 0
[2025-11-26 21:49:07] 2025-11-27 02:49:07,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:49:07] 2025-11-27 02:49:07,583 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:49:07] 2025-11-27 02:49:07,588 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:49:07] 2025-11-27 02:49:07,593 [wrapper] pilotpid: 12177
[2025-11-26 21:49:07] 2025-11-27 02:49:07,599 [wrapper] Pilot exit status: 0
[2025-11-26 21:49:07] 2025-11-27 02:49:07,616 [wrapper] pandaids: 6891565362
[2025-11-26 21:49:07] 2025-11-27 02:49:07,657 [wrapper] cleanup supervisor_pilot 18884 12178
[2025-11-26 21:49:07] 2025-11-27 02:49:07,662 [wrapper] Test setup, not cleaning
[2025-11-26 21:49:07] 2025-11-27 02:49:07,667 [wrapper] apfmon messages muted
[2025-11-26 21:49:07] 2025-11-27 02:49:07,673 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:49:07] 2025-11-27 02:49:07,677 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:49:07]  *** Error codes and diagnostics ***
[2025-11-26 21:49:07]     "exeErrorCode": 0,
[2025-11-26 21:49:07]     "exeErrorDiag": "",
[2025-11-26 21:49:07]     "pilotErrorCode": 0,
[2025-11-26 21:49:07]     "pilotErrorDiag": "",
[2025-11-26 21:49:07]  *** Listing of results directory ***
[2025-11-26 21:49:07] total 1308372
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 10:29 queuedata.json
[2025-11-26 21:49:07] -rwx------ 1 boincer umatlas     36292 Nov 18 10:30 runpilot2-wrapper.sh
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas       100 Nov 26 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:49:07] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 09:17 run_atlas
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas       105 Nov 26 09:17 job.xml
[2025-11-26 21:49:07] -rw-r--r-- 2 boincer umatlas 410375700 Nov 26 09:17 EVNT.47493065._000147.pool.root.1
[2025-11-26 21:49:07] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 09:17 start_atlas.sh
[2025-11-26 21:49:07] drwxrwx--x 2 boincer umatlas      4096 Nov 26 09:17 shared
[2025-11-26 21:49:07] -rw-r--r-- 2 boincer umatlas    590100 Nov 26 09:17 input.tar.gz
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas         0 Nov 26 09:17 boinc_lockfile
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas      2773 Nov 26 09:17 pandaJob.out
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas    992360 Nov 26 09:17 agis_schedconf.cvmfs.json
[2025-11-26 21:49:07] drwx------ 5 boincer umatlas      4096 Nov 26 09:17 pilot3
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas       533 Nov 26 21:34 boinc_task_state.xml
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 21:47 init_data.xml
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas 909194568 Nov 26 21:47 HITS.47493068._001466.pool.root.1
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas      1064 Nov 26 21:48 memory_monitor_summary.json
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas   1516240 Nov 26 21:48 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas   1982167 Nov 26 21:48 log.47493068._001466.job.log.tgz.1
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas      8660 Nov 26 21:48 heartbeat.json
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 21:48 boinc_mmap_file
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas        29 Nov 26 21:48 wrapper_checkpoint.txt
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas        95 Nov 26 21:49 pilot_heartbeat.json
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas      4746 Nov 26 21:49 pilotlog.txt
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas   6161672 Nov 26 21:49 log.47493068._001466.job.log.1
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas       353 Nov 26 21:49 output.list
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas       620 Nov 26 21:49 runtime_log
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas   8161280 Nov 26 21:49 result.tar.gz
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas      8704 Nov 26 21:49 runtime_log.err
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas       668 Nov 26 21:49 JEeMDmWqcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKTFKDmvHuvYm.diag
[2025-11-26 21:49:07] -rw-r--r-- 1 boincer umatlas     21300 Nov 26 21:49 stderr.txt
[2025-11-26 21:49:07] HITS file was successfully produced:
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas 909194568 Nov 26 21:47 shared/HITS.pool.root.1
[2025-11-26 21:49:07]  *** Contents of shared directory: ***
[2025-11-26 21:49:07] total 1297220
[2025-11-26 21:49:07] -rw-r--r-- 2 boincer umatlas 410375700 Nov 26 09:17 ATLAS.root_0
[2025-11-26 21:49:07] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 09:17 start_atlas.sh
[2025-11-26 21:49:07] -rw-r--r-- 2 boincer umatlas    590100 Nov 26 09:17 input.tar.gz
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas 909194568 Nov 26 21:47 HITS.pool.root.1
[2025-11-26 21:49:07] -rw------- 1 boincer umatlas   8161280 Nov 26 21:49 result.tar.gz
21:49:09 (7374): run_atlas exited; CPU time 346094.599716
21:49:09 (7374): called boinc_finish(0)

</stderr_txt>
]]>

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