Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:20:34 (29630): wrapper (7.7.26015): starting
20:20:34 (29630): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 20:20:34] Arguments: --nthreads 8
[2025-11-28 20:20:34] Threads: 8
[2025-11-28 20:20:34] Checking for CVMFS
[2025-11-28 20:20:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 20:20:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 20:20:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 20:20:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 20:20:37] 2.11.2.0 29208 225642 135768 153417 2 75 21886168 25165824 1774 130560 8 97825991 99.900 40264761 2349 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-28 20:20:37] CVMFS is ok
[2025-11-28 20:20:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 20:20:37] Checking for apptainer binary...
[2025-11-28 20:20:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 20:20:37] Running /usr/bin/apptainer --version
[2025-11-28 20:20:37] apptainer version 1.3.2-1.el7
[2025-11-28 20:20:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 20:20:52] cg-vwn345.simple-grid.lan
[2025-11-28 20:20:52] apptainer works
[2025-11-28 20:20:52] Set ATHENA_PROC_NUMBER=8
[2025-11-28 20:20:52] Set ATHENA_CORE_NUMBER=8
[2025-11-28 20:20:53] Starting ATLAS job with PandaID=6894239127
[2025-11-28 20:20:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 06:48:44]  *** The last 200 lines of the pilot log: ***
[2025-11-29 06:48:44] 2025-11-29 05:48:00,905 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-29 06:48:44] 2025-11-29 05:48:00,906 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-29 06:48:44] 2025-11-29 05:48:00,908 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6894239127/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 06:48:44] 2025-11-29 05:48:00,909 | INFO     | extracted standard info from prmon json
[2025-11-29 06:48:44] 2025-11-29 05:48:00,909 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 06:48:44] 2025-11-29 05:48:00,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 06:48:44] 2025-11-29 05:48:00,910 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 06:48:44] 2025-11-29 05:48:00,910 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 06:48:44] 2025-11-29 05:48:00,940 | INFO     | fitting pss+swap vs Time
[2025-11-29 06:48:44] 2025-11-29 05:48:00,941 | INFO     | sum of square deviations: 68326322955.0
[2025-11-29 06:48:44] 2025-11-29 05:48:00,951 | INFO     | sum of deviations: 228869328687.99985
[2025-11-29 06:48:44] 2025-11-29 05:48:00,952 | INFO     | mean x: 1764376763.5
[2025-11-29 06:48:44] 2025-11-29 05:48:00,952 | INFO     | mean y: 2526391.5033112583
[2025-11-29 06:48:44] 2025-11-29 05:48:00,952 | INFO     | intersect: -5907519809.591148
[2025-11-29 06:48:44] 2025-11-29 05:48:00,953 | INFO     | chi2: 7.478193381657784
[2025-11-29 06:48:44] 2025-11-29 05:48:00,954 | INFO     | sum of square deviations: 66643482100.0
[2025-11-29 06:48:44] 2025-11-29 05:48:00,964 | INFO     | sum of deviations: 309726133417.00006
[2025-11-29 06:48:44] 2025-11-29 05:48:00,964 | INFO     | mean x: 1764376611.0
[2025-11-29 06:48:44] 2025-11-29 05:48:00,964 | INFO     | mean y: 2533681.0484140236
[2025-11-29 06:48:44] 2025-11-29 05:48:00,964 | INFO     | intersect: -8197421189.203188
[2025-11-29 06:48:44] 2025-11-29 05:48:00,965 | INFO     | chi2: 5.925783267645217
[2025-11-29 06:48:44] 2025-11-29 05:48:00,965 | INFO     | current chi2=5.925783267645217 (change=20.759159796806763 %)
[2025-11-29 06:48:44] 2025-11-29 05:48:00,965 | INFO     | right removable region: 598
[2025-11-29 06:48:44] 2025-11-29 05:48:00,966 | INFO     | sum of square deviations: 66643482100.0
[2025-11-29 06:48:44] 2025-11-29 05:48:00,977 | INFO     | sum of deviations: 21229068475.999992
[2025-11-29 06:48:44] 2025-11-29 05:48:00,977 | INFO     | mean x: 1764376916.0
[2025-11-29 06:48:44] 2025-11-29 05:48:00,977 | INFO     | mean y: 2545199.6410684474
[2025-11-29 06:48:44] 2025-11-29 05:48:00,977 | INFO     | intersect: -559491434.5046988
[2025-11-29 06:48:44] 2025-11-29 05:48:00,978 | INFO     | chi2: 3.299117192763471
[2025-11-29 06:48:44] 2025-11-29 05:48:00,978 | INFO     | current chi2=3.299117192763471 (change=55.883499872370045 %)
[2025-11-29 06:48:44] 2025-11-29 05:48:00,979 | INFO     | sum of square deviations: 64988502232.5
[2025-11-29 06:48:44] 2025-11-29 05:48:00,988 | INFO     | sum of deviations: -98491620133.5
[2025-11-29 06:48:44] 2025-11-29 05:48:00,989 | INFO     | mean x: 1764377068.5
[2025-11-29 06:48:44] 2025-11-29 05:48:00,989 | INFO     | mean y: 2556217.19023569
[2025-11-29 06:48:44] 2025-11-29 05:48:00,989 | INFO     | intersect: 2676511609.811313
[2025-11-29 06:48:44] 2025-11-29 05:48:00,990 | INFO     | chi2: 1.8310918710715116
[2025-11-29 06:48:44] 2025-11-29 05:48:00,990 | INFO     | current chi2=1.8310918710715116 (change=44.49751966714111 %)
[2025-11-29 06:48:44] 2025-11-29 05:48:00,991 | INFO     | sum of square deviations: 63361150790.0
[2025-11-29 06:48:44] 2025-11-29 05:48:01,001 | INFO     | sum of deviations: -115532501901.0
[2025-11-29 06:48:44] 2025-11-29 05:48:01,001 | INFO     | mean x: 1764377221.0
[2025-11-29 06:48:44] 2025-11-29 05:48:01,002 | INFO     | mean y: 2557811.4244482173
[2025-11-29 06:48:44] 2025-11-29 05:48:01,002 | INFO     | intersect: 3219717097.480774
[2025-11-29 06:48:44] 2025-11-29 05:48:01,003 | INFO     | chi2: 1.7925097322421344
[2025-11-29 06:48:44] 2025-11-29 05:48:01,003 | INFO     | current chi2=1.7925097322421344 (change=2.1070564202111752 %)
[2025-11-29 06:48:44] 2025-11-29 05:48:01,003 | INFO     | left removable region: 30
[2025-11-29 06:48:44] 2025-11-29 05:48:01,004 | INFO     | sum of square deviations: 56822728662.0
[2025-11-29 06:48:44] 2025-11-29 05:48:01,012 | INFO     | sum of deviations: 2929375550.0000005
[2025-11-29 06:48:44] 2025-11-29 05:48:01,013 | INFO     | mean x: 1764377495.5
[2025-11-29 06:48:44] 2025-11-29 05:48:01,013 | INFO     | mean y: 2561860.482394366
[2025-11-29 06:48:44] 2025-11-29 05:48:01,013 | INFO     | intersect: -88396888.20832749
[2025-11-29 06:48:44] 2025-11-29 05:48:01,013 | INFO     | chi2: 0.1127990466120471
[2025-11-29 06:48:44] 2025-11-29 05:48:01,014 | INFO     | current memory leak: 0.05 B/s (using 568 data points, chi2=0.11)
[2025-11-29 06:48:44] 2025-11-29 05:48:01,015 | INFO     | could have reported an average CPU frequency of 1999 MHz (23 samples)
[2025-11-29 06:48:44] 2025-11-29 05:48:01,015 | INFO     | ..............................
[2025-11-29 06:48:44] 2025-11-29 05:48:01,015 | INFO     | . Timing measurements:
[2025-11-29 06:48:44] 2025-11-29 05:48:01,015 | INFO     | . get job = 0 s
[2025-11-29 06:48:44] 2025-11-29 05:48:01,015 | INFO     | . initial setup = 7 s
[2025-11-29 06:48:44] 2025-11-29 05:48:01,015 | INFO     | . payload setup = 138 s
[2025-11-29 06:48:44] 2025-11-29 05:48:01,015 | INFO     | . stage-in = 0 s
[2025-11-29 06:48:44] 2025-11-29 05:48:01,015 | INFO     | . payload execution = 36978 s
[2025-11-29 06:48:44] 2025-11-29 05:48:01,015 | INFO     | . stage-out = 3 s
[2025-11-29 06:48:44] 2025-11-29 05:48:01,015 | INFO     | . log creation = 1 s
[2025-11-29 06:48:44] 2025-11-29 05:48:01,016 | INFO     | ..............................
[2025-11-29 06:48:44] 2025-11-29 05:48:01,173 | INFO     | 
[2025-11-29 06:48:44] 2025-11-29 05:48:01,173 | INFO     | job summary report
[2025-11-29 06:48:44] 2025-11-29 05:48:01,173 | INFO     | --------------------------------------------------
[2025-11-29 06:48:44] 2025-11-29 05:48:01,173 | INFO     | PanDA job id: 6894239127
[2025-11-29 06:48:44] 2025-11-29 05:48:01,173 | INFO     | task id: 47523939
[2025-11-29 06:48:44] 2025-11-29 05:48:01,173 | INFO     | errors: (none)
[2025-11-29 06:48:44] 2025-11-29 05:48:01,173 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 06:48:44] 2025-11-29 05:48:01,173 | INFO     | pilot state: finished 
[2025-11-29 06:48:44] 2025-11-29 05:48:01,174 | INFO     | transexitcode: 0
[2025-11-29 06:48:44] 2025-11-29 05:48:01,174 | INFO     | exeerrorcode: 0
[2025-11-29 06:48:44] 2025-11-29 05:48:01,174 | INFO     | exeerrordiag: 
[2025-11-29 06:48:44] 2025-11-29 05:48:01,174 | INFO     | exitcode: 0
[2025-11-29 06:48:44] 2025-11-29 05:48:01,174 | INFO     | exitmsg: OK
[2025-11-29 06:48:44] 2025-11-29 05:48:01,174 | INFO     | cpuconsumptiontime: 144699 s
[2025-11-29 06:48:44] 2025-11-29 05:48:01,174 | INFO     | nevents: 400
[2025-11-29 06:48:44] 2025-11-29 05:48:01,174 | INFO     | neventsw: 0
[2025-11-29 06:48:44] 2025-11-29 05:48:01,174 | INFO     | pid: 7546
[2025-11-29 06:48:44] 2025-11-29 05:48:01,174 | INFO     | pgrp: 7546
[2025-11-29 06:48:44] 2025-11-29 05:48:01,174 | INFO     | corecount: 8
[2025-11-29 06:48:44] 2025-11-29 05:48:01,175 | INFO     | event service: False
[2025-11-29 06:48:44] 2025-11-29 05:48:01,175 | INFO     | sizes: {0: 2283652, 1: 2283708, 2: 2283935, 3: 2283935, 13: 2283963, 24: 2284019, 35: 2284175, 45: 2284203, 56: 2284231, 67: 2284259, 78: 2284287, 88: 2284623, 99:
[2025-11-29 06:48:44] 2025-11-29 05:48:01,175 | INFO     | --------------------------------------------------
[2025-11-29 06:48:44] 2025-11-29 05:48:01,175 | INFO     | 
[2025-11-29 06:48:44] 2025-11-29 05:48:01,175 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-11-29 06:48:44] 2025-11-29 05:48:01,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,221 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,221 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 06:48:44] 2025-11-29 05:48:01,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 06:48:44] 2025-11-29 05:48:01,223 | INFO     | job 6894239127 has completed (purged errors)
[2025-11-29 06:48:44] 2025-11-29 05:48:01,224 | INFO     | overall cleanup function is called
[2025-11-29 06:48:44] 2025-11-29 05:48:02,233 | INFO     | --- collectZombieJob: --- 10, [7546]
[2025-11-29 06:48:44] 2025-11-29 05:48:02,233 | INFO     | zombie collector waiting for pid 7546
[2025-11-29 06:48:44] 2025-11-29 05:48:02,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 06:48:44] 2025-11-29 05:48:02,234 | INFO     | collected zombie processes
[2025-11-29 06:48:44] 2025-11-29 05:48:02,234 | INFO     | will attempt to kill all subprocesses of pid=7546
[2025-11-29 06:48:44] 2025-11-29 05:48:02,340 | INFO     | process IDs to be killed: [7546] (in reverse order)
[2025-11-29 06:48:44] 2025-11-29 05:48:02,983 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 06:48:44] 2025-11-29 05:48:02,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 06:48:44] 2025-11-29 05:48:02,986 | INFO     | did not find any defunct processes belonging to 7546
[2025-11-29 06:48:44] 2025-11-29 05:48:02,989 | INFO     | did not find any defunct processes belonging to 7546
[2025-11-29 06:48:44] 2025-11-29 05:48:02,991 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 06:48:44] 2025-11-29 05:48:02,991 | INFO     | ready for new job
[2025-11-29 06:48:44] 2025-11-29 05:48:02,991 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 06:48:44] 2025-11-29 05:48:02,994 | INFO     | ***************************************
[2025-11-29 06:48:44] 2025-11-29 05:48:02,994 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 06:48:44] 2025-11-29 05:48:02,994 | INFO     | ***************************************
[2025-11-29 06:48:44] 2025-11-29 05:48:02,994 | INFO     | 
[2025-11-29 06:48:44] 2025-11-29 05:48:02,995 | INFO     | pilot is running in a VM
[2025-11-29 06:48:44] 2025-11-29 05:48:02,995 | INFO     | architecture information:
[2025-11-29 06:48:44] 2025-11-29 05:48:03,003 | INFO     | executing command: cat /etc/os-release
[2025-11-29 06:48:44] 2025-11-29 05:48:03,322 | INFO     | cat /etc/os-release:
[2025-11-29 06:48:44] NAME="CentOS Linux"
[2025-11-29 06:48:44] VERSION="7 (Core)"
[2025-11-29 06:48:44] ID="centos"
[2025-11-29 06:48:44] ID_LIKE="rhel fedora"
[2025-11-29 06:48:44] VERSION_ID="7"
[2025-11-29 06:48:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 06:48:44] ANSI_COLOR="0;31"
[2025-11-29 06:48:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 06:48:44] HOME_URL="https://www.centos.org/"
[2025-11-29 06:48:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 06:48:44] 
[2025-11-29 06:48:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 06:48:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 06:48:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 06:48:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 06:48:44] 
[2025-11-29 06:48:44] 2025-11-29 05:48:03,322 | INFO     | ***************************************
[2025-11-29 06:48:44] 2025-11-29 05:48:03,825 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-11-29 06:48:44] 2025-11-29 05:48:04,051 | INFO     | sufficient remaining disk space (493447282688 B)
[2025-11-29 06:48:44] 2025-11-29 05:48:04,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 06:48:44] 2025-11-29 05:48:04,051 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 06:48:44] 2025-11-29 05:48:04,051 | INFO     | update_server=False
[2025-11-29 06:48:44] 2025-11-29 05:48:04,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 06:48:44] 2025-11-29 05:48:04,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 06:48:44] 2025-11-29 05:48:04,086 | INFO     | all data control threads have been joined
[2025-11-29 06:48:44] 2025-11-29 05:48:04,523 | INFO     | all job control threads have been joined
[2025-11-29 06:48:44] 2025-11-29 05:48:04,685 | INFO     | all payload control threads have been joined
[2025-11-29 06:48:44] 2025-11-29 05:48:04,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 06:48:44] 2025-11-29 05:48:04,694 | INFO     | aborting loop
[2025-11-29 06:48:44] 2025-11-29 05:48:05,057 | INFO     | [job] retrieve thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:05,092 | INFO     | [data] control thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:05,105 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:05,481 | INFO     | [payload] validate_post thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:05,529 | INFO     | [job] control thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:05,691 | INFO     | [payload] control thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:05,699 | INFO     | [job] job monitor thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:05,846 | INFO     | [payload] failed_post thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:05,950 | INFO     | [job] validate thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:06,058 | INFO     | [data] copytool_out thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:06,080 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:06,187 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 06:48:44] 2025-11-29 05:48:06,230 | INFO     | [data] copytool_in thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:06,267 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:06,272 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:06,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 06:48:44] 2025-11-29 05:48:07,193 | INFO     | [job] queue monitor thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:10,293 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 06:48:44] 2025-11-29 05:48:32,633 | INFO     | [monitor] cgroup control has ended
[2025-11-29 06:48:44] 2025-11-29 05:48:33,761 | INFO     | PID=979 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-11-29 06:48:44] 2025-11-29 05:48:33,762 | INFO     | .. there are 9 such processes running
[2025-11-29 06:48:44] 2025-11-29 05:48:33,763 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 06:48:44] 2025-11-29 05:48:33,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 06:48:44] 2025-11-29 05:48:33,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 06:48:44] 2025-11-29 05:48:34,613 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253759776576)>', '<ExcThread(monitor, started 140253448869632)>']
[2025-11-29 06:48:44] 2025-11-29 05:48:34,769 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 06:48:44] 2025-11-29 05:48:34,769 | INFO     | [monitor] control thread has ended
[2025-11-29 06:48:44] 2025-11-29 05:48:39,638 | INFO     | all workflow threads have been joined
[2025-11-29 06:48:44] 2025-11-29 05:48:39,638 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 06:48:44] 2025-11-29 05:48:39,639 | INFO     | traces error code: 0
[2025-11-29 06:48:44] 2025-11-29 05:48:39,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 06:48:44] 2025-11-29 05:48:39,952 [wrapper] ==== pilot stdout END ====
[2025-11-29 06:48:44] 2025-11-29 05:48:39,998 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 06:48:44] 2025-11-29 05:48:40,046 [wrapper] pilotpid: 979
[2025-11-29 06:48:44] 2025-11-29 05:48:40,096 [wrapper] Pilot exit status: 0
[2025-11-29 06:48:44] 2025-11-29 05:48:40,531 [wrapper] pandaids: 6894239127
[2025-11-29 06:48:44] 2025-11-29 05:48:41,527 [wrapper] cleanup supervisor_pilot   793 980
[2025-11-29 06:48:44] 2025-11-29 05:48:41,635 [wrapper] Test setup, not cleaning
[2025-11-29 06:48:44] 2025-11-29 05:48:41,746 [wrapper] apfmon messages muted
[2025-11-29 06:48:44] 2025-11-29 05:48:41,797 [wrapper] ==== wrapper stdout END ====
[2025-11-29 06:48:44] 2025-11-29 05:48:41,858 [wrapper] ==== wrapper stderr END ====
[2025-11-29 06:48:44]  *** Error codes and diagnostics ***
[2025-11-29 06:48:44]     "exeErrorCode": 0,
[2025-11-29 06:48:44]     "exeErrorDiag": "",
[2025-11-29 06:48:44]     "pilotErrorCode": 0,
[2025-11-29 06:48:44]     "pilotErrorDiag": "",
[2025-11-29 06:48:44]  *** Listing of results directory ***
[2025-11-29 06:48:44] total 632768
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc    576529 Nov 25 06:12 pilot3.tar.gz
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc      5112 Nov 25 06:18 queuedata.json
[2025-11-29 06:48:44] -rwx------. 1 boinc boinc     36292 Nov 25 06:18 runpilot2-wrapper.sh
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc       100 Nov 28 20:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 06:48:44] -rwxr-xr-x. 1 boinc boinc      7986 Nov 28 20:20 run_atlas
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc       105 Nov 28 20:20 job.xml
[2025-11-29 06:48:44] -rw-r--r--. 2 boinc boinc 296317559 Nov 28 20:20 EVNT.47523935._000001.pool.root.1
[2025-11-29 06:48:44] -rw-r--r--. 2 boinc boinc     15847 Nov 28 20:20 start_atlas.sh
[2025-11-29 06:48:44] drwxrwx--x. 2 boinc boinc        68 Nov 28 20:20 shared
[2025-11-29 06:48:44] -rw-r--r--. 2 boinc boinc    589930 Nov 28 20:20 input.tar.gz
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc      6392 Nov 28 20:20 init_data.xml
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc         0 Nov 28 20:20 boinc_lockfile
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc      2600 Nov 28 20:20 pandaJob.out
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc    991794 Nov 28 20:24 agis_schedconf.cvmfs.json
[2025-11-29 06:48:44] drwx------. 5 boinc boinc      4096 Nov 28 20:24 pilot3
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc 336354610 Nov 29 06:44 HITS.47523939._000001.pool.root.1
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc       532 Nov 29 06:44 boinc_task_state.xml
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc      1014 Nov 29 06:46 memory_monitor_summary.json
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc   1516240 Nov 29 06:46 agis_ddmendpoints.agis.ALL.json
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc    746642 Nov 29 06:46 log.47523939._000001.job.log.tgz.1
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc      7760 Nov 29 06:48 heartbeat.json
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc      8192 Nov 29 06:48 boinc_mmap_file
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc        29 Nov 29 06:48 wrapper_checkpoint.txt
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc        95 Nov 29 06:48 pilot_heartbeat.json
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc      4883 Nov 29 06:48 pilotlog.txt
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc   4943054 Nov 29 06:48 log.47523939._000001.job.log.1
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc       357 Nov 29 06:48 output.list
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc       620 Nov 29 06:48 runtime_log
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc   5713920 Nov 29 06:48 result.tar.gz
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc       659 Nov 29 06:48 SwSLDmhc0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmq9LKDmtelI0n.diag
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc      8833 Nov 29 06:48 runtime_log.err
[2025-11-29 06:48:44] -rw-r--r--. 1 boinc boinc     20876 Nov 29 06:48 stderr.txt
[2025-11-29 06:48:44] HITS file was successfully produced:
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc 336354610 Nov 29 06:44 shared/HITS.pool.root.1
[2025-11-29 06:48:44]  *** Contents of shared directory: ***
[2025-11-29 06:48:44] total 624024
[2025-11-29 06:48:44] -rw-r--r--. 2 boinc boinc 296317559 Nov 28 20:20 ATLAS.root_0
[2025-11-29 06:48:44] -rw-r--r--. 2 boinc boinc     15847 Nov 28 20:20 start_atlas.sh
[2025-11-29 06:48:44] -rw-r--r--. 2 boinc boinc    589930 Nov 28 20:20 input.tar.gz
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc 336354610 Nov 29 06:44 HITS.pool.root.1
[2025-11-29 06:48:44] -rw-------. 1 boinc boinc   5713920 Nov 29 06:48 result.tar.gz
06:48:46 (29630): run_atlas exited; CPU time 145190.713780
06:48:46 (29630): called boinc_finish(0)

</stderr_txt>
]]>

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