Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:58:08 (2387074): wrapper (7.7.26015): starting
08:58:08 (2387074): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 08:58:08] Arguments: --nthreads 10
[2025-11-26 08:58:08] Threads: 10
[2025-11-26 08:58:08] Checking for CVMFS
[2025-11-26 08:58:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:58:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:58:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:58:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:58:09] 2.13.3.0 1933508 27342 344436 153323 2 798 24349629 32503809 47320 16776704 0 163760170 99.531 191411123 38016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 08:58:09] CVMFS is ok
[2025-11-26 08:58:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:58:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:58:09] Further information can be found at the LHC@home message board.
[2025-11-26 08:58:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:58:09] Checking for apptainer binary...
[2025-11-26 08:58:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:58:09] Running /usr/bin/apptainer --version
[2025-11-26 08:58:09] apptainer version 1.4.4-1.el9
[2025-11-26 08:58:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:58:09] c7-3-16.aglt2.org
[2025-11-26 08:58:09] apptainer works
[2025-11-26 08:58:09] Set ATHENA_PROC_NUMBER=10
[2025-11-26 08:58:09] Set ATHENA_CORE_NUMBER=10
[2025-11-26 08:58:09] Starting ATLAS job with PandaID=6891588201
[2025-11-26 08:58:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:40:07 (2387074): BOINC client no longer exists - exiting
16:40:07 (2387074): timer handler: client dead, exiting
16:49:06 (3068078): wrapper (7.7.26015): starting
16:49:06 (3068078): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 16:49:06] Arguments: --nthreads 10
[2025-11-26 16:49:06] Threads: 10
[2025-11-26 16:49:06] This job has been restarted, cleaning up previous attempt
[2025-11-26 16:49:06] Checking for CVMFS
[2025-11-26 16:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:49:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:49:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:49:06] 2.13.3.0 1933508 27813 341072 153335 0 686 31997761 32503808 53695 16776704 0 172343951 99.540 197399577 37666 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:49:06] CVMFS is ok
[2025-11-26 16:49:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:49:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:49:06] Further information can be found at the LHC@home message board.
[2025-11-26 16:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:49:06] Checking for apptainer binary...
[2025-11-26 16:49:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:49:06] Running /usr/bin/apptainer --version
[2025-11-26 16:49:07] apptainer version 1.4.4-1.el9
[2025-11-26 16:49:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:49:07] c7-3-16.aglt2.org
[2025-11-26 16:49:07] apptainer works
[2025-11-26 16:49:07] Set ATHENA_PROC_NUMBER=10
[2025-11-26 16:49:07] Set ATHENA_CORE_NUMBER=10
[2025-11-26 16:49:07] Starting ATLAS job with PandaID=6891588201
[2025-11-26 16:49:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:20:12 (3068078): BOINC client no longer exists - exiting
18:20:12 (3068078): timer handler: client dead, exiting
18:29:53 (66956): wrapper (7.7.26015): starting
18:29:53 (66956): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 18:29:53] Arguments: --nthreads 10
[2025-11-26 18:29:53] Threads: 10
[2025-11-26 18:29:53] This job has been restarted, cleaning up previous attempt
[2025-11-26 18:29:53] Checking for CVMFS
[2025-11-26 18:29:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:29:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:29:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:29:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:29:53] 2.13.3.0 1933508 27913 319320 153340 0 165 31198774 32503808 54069 16776704 0 175435839 99.537 202278147 37380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:29:53] CVMFS is ok
[2025-11-26 18:29:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:29:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:29:53] Further information can be found at the LHC@home message board.
[2025-11-26 18:29:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:29:53] Checking for apptainer binary...
[2025-11-26 18:29:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:29:53] Running /usr/bin/apptainer --version
[2025-11-26 18:29:53] apptainer version 1.4.4-1.el9
[2025-11-26 18:29:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:29:53] c7-3-16.aglt2.org
[2025-11-26 18:29:53] apptainer works
[2025-11-26 18:29:53] Set ATHENA_PROC_NUMBER=10
[2025-11-26 18:29:53] Set ATHENA_CORE_NUMBER=10
[2025-11-26 18:29:53] Starting ATLAS job with PandaID=6891588201
[2025-11-26 18:29:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:02:21]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:02:21] 2025-11-27 08:01:44,885 | INFO     | monitor loop #1783: job 0:6891588201 is in state 'finished'
[2025-11-27 03:02:21] 2025-11-27 08:01:44,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:02:21] 2025-11-27 08:01:46,448 | INFO     | time since job start (30703s) is within the limit (172800.0s)
[2025-11-27 03:02:21] 2025-11-27 08:01:47,183 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 03:02:21] 2025-11-27 08:01:47,191 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3306.272427083333
[2025-11-27 03:02:21] 2025-11-27 08:01:47,206 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6891588201/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:02:21] 2025-11-27 08:01:47,207 | INFO     | extracted standard info from prmon json
[2025-11-27 03:02:21] 2025-11-27 08:01:47,207 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:02:21] 2025-11-27 08:01:47,207 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:02:21] 2025-11-27 08:01:47,215 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:02:21] 2025-11-27 08:01:47,215 | INFO     | sum of square deviations: 39462393002.834984
[2025-11-27 03:02:21] 2025-11-27 08:01:47,222 | INFO     | sum of deviations: 591792330076.0233
[2025-11-27 03:02:21] 2025-11-27 08:01:47,222 | INFO     | mean x: 1764215142.0656064
[2025-11-27 03:02:21] 2025-11-27 08:01:47,222 | INFO     | mean y: 3365296.5447316105
[2025-11-27 03:02:21] 2025-11-27 08:01:47,222 | INFO     | intersect: -26453443584.847816
[2025-11-27 03:02:21] 2025-11-27 08:01:47,223 | INFO     | chi2: 5.112696934880074
[2025-11-27 03:02:21] 2025-11-27 08:01:47,223 | INFO     | sum of square deviations: 38297409049.60048
[2025-11-27 03:02:21] 2025-11-27 08:01:47,228 | INFO     | sum of deviations: 780786707679.8229
[2025-11-27 03:02:21] 2025-11-27 08:01:47,228 | INFO     | mean x: 1764214989.5763052
[2025-11-27 03:02:21] 2025-11-27 08:01:47,228 | INFO     | mean y: 3390021.425702811
[2025-11-27 03:02:21] 2025-11-27 08:01:47,228 | INFO     | intersect: -35964463876.12265
[2025-11-27 03:02:21] 2025-11-27 08:01:47,229 | INFO     | chi2: 2.1197284998859494
[2025-11-27 03:02:21] 2025-11-27 08:01:47,229 | INFO     | current chi2=2.1197284998859494 (change=58.53991490431125 %)
[2025-11-27 03:02:21] 2025-11-27 08:01:47,229 | INFO     | sum of square deviations: 37155527933.5902
[2025-11-27 03:02:21] 2025-11-27 08:01:47,234 | INFO     | sum of deviations: 798833601161.2395
[2025-11-27 03:02:21] 2025-11-27 08:01:47,234 | INFO     | mean x: 1764214837.0831642
[2025-11-27 03:02:21] 2025-11-27 08:01:47,234 | INFO     | mean y: 3392405.8722109534
[2025-11-27 03:02:21] 2025-11-27 08:01:47,234 | INFO     | intersect: -37926739929.97203
[2025-11-27 03:02:21] 2025-11-27 08:01:47,235 | INFO     | chi2: 1.9288155850966646
[2025-11-27 03:02:21] 2025-11-27 08:01:47,235 | INFO     | current chi2=1.9288155850966646 (change=9.006479593945956 %)
[2025-11-27 03:02:21] 2025-11-27 08:01:47,235 | INFO     | right removable region: 492
[2025-11-27 03:02:21] 2025-11-27 08:01:47,236 | INFO     | sum of square deviations: 38297143335.89757
[2025-11-27 03:02:21] 2025-11-27 08:01:47,240 | INFO     | sum of deviations: 460874991881.6924
[2025-11-27 03:02:21] 2025-11-27 08:01:47,240 | INFO     | mean x: 1764215294.5722892
[2025-11-27 03:02:21] 2025-11-27 08:01:47,240 | INFO     | mean y: 3382378.7168674697
[2025-11-27 03:02:21] 2025-11-27 08:01:47,240 | INFO     | intersect: -21227514725.857082
[2025-11-27 03:02:21] 2025-11-27 08:01:47,241 | INFO     | chi2: 3.4988998961099247
[2025-11-27 03:02:21] 2025-11-27 08:01:47,241 | INFO     | current chi2=3.4988998961099247 (change=31.564496376861882 %)
[2025-11-27 03:02:21] 2025-11-27 08:01:47,241 | INFO     | sum of square deviations: 37155148153.37129
[2025-11-27 03:02:21] 2025-11-27 08:01:47,246 | INFO     | sum of deviations: 409518587283.3975
[2025-11-27 03:02:21] 2025-11-27 08:01:47,246 | INFO     | mean x: 1764215447.0730224
[2025-11-27 03:02:21] 2025-11-27 08:01:47,246 | INFO     | mean y: 3389233.7667342797
[2025-11-27 03:02:21] 2025-11-27 08:01:47,246 | INFO     | intersect: -19441534375.91983
[2025-11-27 03:02:21] 2025-11-27 08:01:47,246 | INFO     | chi2: 3.3923683916530445
[2025-11-27 03:02:21] 2025-11-27 08:01:47,246 | INFO     | current chi2=3.3923683916530445 (change=3.0447142707718466 %)
[2025-11-27 03:02:21] 2025-11-27 08:01:47,247 | INFO     | left removable region: 20
[2025-11-27 03:02:21] 2025-11-27 08:01:47,247 | INFO     | sum of square deviations: 32606717973.709724
[2025-11-27 03:02:21] 2025-11-27 08:01:47,251 | INFO     | sum of deviations: 529658273672.14417
[2025-11-27 03:02:21] 2025-11-27 08:01:47,251 | INFO     | mean x: 1764215416.595339
[2025-11-27 03:02:21] 2025-11-27 08:01:47,251 | INFO     | mean y: 3429125.974576271
[2025-11-27 03:02:21] 2025-11-27 08:01:47,251 | INFO     | intersect: -28654201877.95188
[2025-11-27 03:02:21] 2025-11-27 08:01:47,252 | INFO     | chi2: 0.08657828841835576
[2025-11-27 03:02:21] 2025-11-27 08:01:47,252 | INFO     | current memory leak: 16.24 B/s (using 472 data points, chi2=0.09)
[2025-11-27 03:02:21] 2025-11-27 08:01:47,252 | INFO     | could have reported an average CPU frequency of 3297 MHz (20 samples)
[2025-11-27 03:02:21] 2025-11-27 08:01:47,253 | INFO     | ..............................
[2025-11-27 03:02:21] 2025-11-27 08:01:47,253 | INFO     | . Timing measurements:
[2025-11-27 03:02:21] 2025-11-27 08:01:47,253 | INFO     | . get job = 0 s
[2025-11-27 03:02:21] 2025-11-27 08:01:47,253 | INFO     | . initial setup = 0 s
[2025-11-27 03:02:21] 2025-11-27 08:01:47,253 | INFO     | . payload setup = 5 s
[2025-11-27 03:02:21] 2025-11-27 08:01:47,253 | INFO     | . stage-in = 0 s
[2025-11-27 03:02:21] 2025-11-27 08:01:47,253 | INFO     | . payload execution = 30666 s
[2025-11-27 03:02:21] 2025-11-27 08:01:47,253 | INFO     | . stage-out = 3 s
[2025-11-27 03:02:21] 2025-11-27 08:01:47,253 | INFO     | . log creation = 0 s
[2025-11-27 03:02:21] 2025-11-27 08:01:47,253 | INFO     | ..............................
[2025-11-27 03:02:21] 2025-11-27 08:01:47,324 | INFO     | 
[2025-11-27 03:02:21] 2025-11-27 08:01:47,325 | INFO     | job summary report
[2025-11-27 03:02:21] 2025-11-27 08:01:47,325 | INFO     | --------------------------------------------------
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | PanDA job id: 6891588201
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | task id: 47493068
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | errors: (none)
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | pilot state: finished 
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | transexitcode: 0
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | exeerrorcode: 0
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | exeerrordiag: 
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | exitcode: 0
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | exitmsg: OK
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | cpuconsumptiontime: 186130 s
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | nevents: 1000
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | neventsw: 0
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | pid: 141690
[2025-11-27 03:02:21] 2025-11-27 08:01:47,326 | INFO     | pgrp: 141690
[2025-11-27 03:02:21] 2025-11-27 08:01:47,327 | INFO     | corecount: 10
[2025-11-27 03:02:21] 2025-11-27 08:01:47,327 | INFO     | event service: False
[2025-11-27 03:02:21] 2025-11-27 08:01:47,327 | INFO     | sizes: {0: 2284304, 5: 2284566, 11: 2284622, 30676: 2323575, 30679: 2332569, 30680: 2332625, 30689: 2332999}
[2025-11-27 03:02:21] 2025-11-27 08:01:47,327 | INFO     | --------------------------------------------------
[2025-11-27 03:02:21] 2025-11-27 08:01:47,327 | INFO     | 
[2025-11-27 03:02:21] 2025-11-27 08:01:47,327 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 03:02:21] 2025-11-27 08:01:47,387 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,389 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:02:21] 2025-11-27 08:01:47,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,389 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:02:21] 2025-11-27 08:01:47,389 | INFO     | job 6891588201 has completed (purged errors)
[2025-11-27 03:02:21] 2025-11-27 08:01:47,389 | INFO     | overall cleanup function is called
[2025-11-27 03:02:21] 2025-11-27 08:01:48,407 | INFO     | --- collectZombieJob: --- 10, [141690]
[2025-11-27 03:02:21] 2025-11-27 08:01:48,407 | INFO     | zombie collector waiting for pid 141690
[2025-11-27 03:02:21] 2025-11-27 08:01:48,408 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:02:21] 2025-11-27 08:01:48,408 | INFO     | collected zombie processes
[2025-11-27 03:02:21] 2025-11-27 08:01:48,408 | INFO     | will attempt to kill all subprocesses of pid=141690
[2025-11-27 03:02:21] 2025-11-27 08:01:49,277 | INFO     | process IDs to be killed: [141690] (in reverse order)
[2025-11-27 03:02:21] 2025-11-27 08:01:49,504 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:02:21] 2025-11-27 08:01:49,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:02:21] 2025-11-27 08:01:49,538 | INFO     | did not find any defunct processes belonging to 141690
[2025-11-27 03:02:21] 2025-11-27 08:01:49,569 | INFO     | did not find any defunct processes belonging to 141690
[2025-11-27 03:02:21] 2025-11-27 08:01:49,571 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:02:21] 2025-11-27 08:01:49,571 | INFO     | ready for new job
[2025-11-27 03:02:21] 2025-11-27 08:01:49,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:02:21] 2025-11-27 08:01:49,573 | INFO     | ***************************************
[2025-11-27 03:02:21] 2025-11-27 08:01:49,574 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:02:21] 2025-11-27 08:01:49,574 | INFO     | ***************************************
[2025-11-27 03:02:21] 2025-11-27 08:01:49,574 | INFO     | 
[2025-11-27 03:02:21] 2025-11-27 08:01:49,578 | INFO     | architecture information:
[2025-11-27 03:02:21] 2025-11-27 08:01:49,579 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:02:21] 2025-11-27 08:01:49,595 | INFO     | cat /etc/os-release:
[2025-11-27 03:02:21] NAME="CentOS Linux"
[2025-11-27 03:02:21] VERSION="7 (Core)"
[2025-11-27 03:02:21] ID="centos"
[2025-11-27 03:02:21] ID_LIKE="rhel fedora"
[2025-11-27 03:02:21] VERSION_ID="7"
[2025-11-27 03:02:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:02:21] ANSI_COLOR="0;31"
[2025-11-27 03:02:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:02:21] HOME_URL="https://www.centos.org/"
[2025-11-27 03:02:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:02:21] 
[2025-11-27 03:02:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:02:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:02:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:02:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:02:21] 
[2025-11-27 03:02:21] 2025-11-27 08:01:49,596 | INFO     | ***************************************
[2025-11-27 03:02:21] 2025-11-27 08:01:50,104 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 03:02:21] 2025-11-27 08:01:50,127 | INFO     | sufficient remaining disk space (86878715904 B)
[2025-11-27 03:02:21] 2025-11-27 08:01:50,127 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:02:21] 2025-11-27 08:01:50,128 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:02:21] 2025-11-27 08:01:50,128 | INFO     | update_server=False
[2025-11-27 03:02:21] 2025-11-27 08:01:50,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:02:21] 2025-11-27 08:01:50,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:02:21] 2025-11-27 08:01:50,773 | INFO     | all payload control threads have been joined
[2025-11-27 03:02:21] 2025-11-27 08:01:50,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:02:21] 2025-11-27 08:01:50,907 | INFO     | aborting loop
[2025-11-27 03:02:21] 2025-11-27 08:01:50,911 | INFO     | all data control threads have been joined
[2025-11-27 03:02:21] 2025-11-27 08:01:51,135 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:51,178 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:51,198 | INFO     | all job control threads have been joined
[2025-11-27 03:02:21] 2025-11-27 08:01:51,240 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:51,442 | INFO     | [job] validate thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:51,562 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:51,790 | INFO     | [payload] control thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:51,913 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:51,916 | INFO     | [data] control thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:51,971 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:52,208 | INFO     | [job] control thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:52,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:02:21] 2025-11-27 08:01:52,382 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:52,415 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:52,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:52,553 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:53,347 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:53,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:02:21] 2025-11-27 08:01:56,560 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:02:21] 2025-11-27 08:01:57,510 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:02:21] 2025-11-27 08:01:59,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139955838510912)>', '<ExcThread(monitor, started 139955133216512)>']
[2025-11-27 03:02:21] 2025-11-27 08:02:04,276 | INFO     | all workflow threads have been joined
[2025-11-27 03:02:21] 2025-11-27 08:02:04,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:02:21] 2025-11-27 08:02:04,277 | INFO     | traces error code: 0
[2025-11-27 03:02:21] 2025-11-27 08:02:04,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:02:21] 2025-11-27 08:02:20,380 | INFO     | PID=93447 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 03:02:21] 2025-11-27 08:02:20,381 | INFO     | .. there are 89 such processes running
[2025-11-27 03:02:21] 2025-11-27 08:02:20,381 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:02:21] 2025-11-27 08:02:20,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:02:21] 2025-11-27 08:02:20,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:02:21] 2025-11-27 08:02:20,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:02:21] 2025-11-27 08:02:20,381 | INFO     | [monitor] control thread has ended
[2025-11-27 03:02:21] 2025-11-27 08:02:20,531 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:02:21] 2025-11-27 08:02:20,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:02:21] 2025-11-27 08:02:20,536 [wrapper] pilotpid: 93447
[2025-11-27 03:02:21] 2025-11-27 08:02:20,538 [wrapper] Pilot exit status: 0
[2025-11-27 03:02:21] 2025-11-27 08:02:20,551 [wrapper] pandaids: 6891588201 6891588201 6891588201
[2025-11-27 03:02:21] 2025-11-27 08:02:20,708 [wrapper] cleanup supervisor_pilot  500217 93449
[2025-11-27 03:02:21] 2025-11-27 08:02:20,711 [wrapper] Test setup, not cleaning
[2025-11-27 03:02:21] 2025-11-27 08:02:20,714 [wrapper] apfmon messages muted
[2025-11-27 03:02:21] 2025-11-27 08:02:20,717 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:02:21] 2025-11-27 08:02:20,743 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:02:21]  *** Error codes and diagnostics ***
[2025-11-27 03:02:21]     "exeErrorCode": 0,
[2025-11-27 03:02:21]     "exeErrorDiag": "",
[2025-11-27 03:02:21]     "pilotErrorCode": 0,
[2025-11-27 03:02:21]     "pilotErrorDiag": "",
[2025-11-27 03:02:21]  *** Listing of results directory ***
[2025-11-27 03:02:21] total 1698948
[2025-11-27 03:02:21] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 12:24 pilot3.tar.gz
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 12:35 queuedata.json
[2025-11-27 03:02:21] -rwx------. 1 boincer umatlas     36292 Nov 18 12:36 runpilot2-wrapper.sh
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas       100 Nov 26 08:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:02:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 08:58 run_atlas
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas       105 Nov 26 08:58 job.xml
[2025-11-27 03:02:21] -rw-r--r--. 3 boincer umatlas 407183474 Nov 26 08:58 EVNT.47493065._000513.pool.root.1
[2025-11-27 03:02:21] -rw-r--r--. 3 boincer umatlas 407183474 Nov 26 08:58 ATLAS.root_0
[2025-11-27 03:02:21] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 08:58 start_atlas.sh
[2025-11-27 03:02:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 08:58 shared
[2025-11-27 03:02:21] -rw-r--r--. 2 boincer umatlas    590095 Nov 26 08:58 input.tar.gz
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas         0 Nov 26 08:58 boinc_lockfile
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 18:29 pandaJob.out
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas    991538 Nov 26 18:30 agis_schedconf.cvmfs.json
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas       533 Nov 27 02:53 boinc_task_state.xml
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 02:56 init_data.xml
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas 909766792 Nov 27 03:00 HITS.47493068._005129.pool.root.1
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas      1072 Nov 27 03:01 memory_monitor_summary.json
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:01 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas   1988299 Nov 27 03:01 log.47493068._005129.job.log.tgz.1
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas        96 Nov 27 03:01 pilot_heartbeat.json
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas      8634 Nov 27 03:01 heartbeat.json
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:02 boinc_mmap_file
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:02 wrapper_checkpoint.txt
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas       821 Nov 27 03:02 pilotlog.txt
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas   3840812 Nov 27 03:02 log.47493068._005129.job.log.1
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas       353 Nov 27 03:02 output.list
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:02 runtime_log
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas   5847040 Nov 27 03:02 result.tar.gz
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas      8786 Nov 27 03:02 runtime_log.err
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas       914 Nov 27 03:02 iTYNDmSoef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmO6FKDmUwlTym.diag
[2025-11-27 03:02:21] -rw-r--r--. 1 boincer umatlas     25903 Nov 27 03:02 stderr.txt
[2025-11-27 03:02:21] HITS file was successfully produced:
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas 909766792 Nov 27 03:00 shared/HITS.pool.root.1
[2025-11-27 03:02:21]  *** Contents of shared directory: ***
[2025-11-27 03:02:21] total 1292408
[2025-11-27 03:02:21] -rw-r--r--. 3 boincer umatlas 407183474 Nov 26 08:58 ATLAS.root_0
[2025-11-27 03:02:21] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 08:58 start_atlas.sh
[2025-11-27 03:02:21] -rw-r--r--. 2 boincer umatlas    590095 Nov 26 08:58 input.tar.gz
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas 909766792 Nov 27 03:00 HITS.pool.root.1
[2025-11-27 03:02:21] -rw-------. 1 boincer umatlas   5847040 Nov 27 03:02 result.tar.gz
03:02:22 (66956): run_atlas exited; CPU time 186886.883751
03:02:22 (66956): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN