Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:13:43 (311896): wrapper (7.7.26015): starting
10:13:43 (311896): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 10:13:44] Arguments: --nthreads 9
[2025-11-26 10:13:44] Threads: 9
[2025-11-26 10:13:44] Checking for CVMFS
[2025-11-26 10:13:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:13:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:13:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:13:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:13:45] 2.13.3.0 14328 30193 202012 153325 1 229 37787457 40960001 50917 16776704 0 370716097 99.722 271067470 51833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 10:13:45] CVMFS is ok
[2025-11-26 10:13:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:13:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:13:46] Further information can be found at the LHC@home message board.
[2025-11-26 10:13:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:13:46] Checking for apptainer binary...
[2025-11-26 10:13:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:13:46] Running /usr/bin/apptainer --version
[2025-11-26 10:13:47] apptainer version 1.4.4-1.el9
[2025-11-26 10:13:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:13:49] c8-16-2.aglt2.org
[2025-11-26 10:13:49] apptainer works
[2025-11-26 10:13:49] Set ATHENA_PROC_NUMBER=9
[2025-11-26 10:13:49] Set ATHENA_CORE_NUMBER=9
[2025-11-26 10:13:49] Starting ATLAS job with PandaID=6895883655
[2025-11-26 10:13:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:47:53]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:47:53] 2025-11-26 23:47:05,018 | INFO     | monitor loop #1720: job 0:6895883655 is in state 'finished'
[2025-11-26 18:47:53] 2025-11-26 23:47:05,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:47:53] 2025-11-26 23:47:05,485 | INFO     | time since job start (30741s) is within the limit (172800.0s)
[2025-11-26 18:47:53] 2025-11-26 23:47:07,492 | INFO     | time since job start (30743s) is within the limit (172800.0s)
[2025-11-26 18:47:53] 2025-11-26 23:47:07,544 | INFO     | monitor loop #1721: job 0:6895883655 is in state 'finished'
[2025-11-26 18:47:53] 2025-11-26 23:47:07,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:47:53] 2025-11-26 23:47:09,499 | INFO     | time since job start (30745s) is within the limit (172800.0s)
[2025-11-26 18:47:53] 2025-11-26 23:47:10,049 | INFO     | monitor loop #1722: job 0:6895883655 is in state 'finished'
[2025-11-26 18:47:53] 2025-11-26 23:47:10,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:47:53] 2025-11-26 23:47:11,506 | INFO     | time since job start (30747s) is within the limit (172800.0s)
[2025-11-26 18:47:53] 2025-11-26 23:47:12,559 | INFO     | monitor loop #1723: job 0:6895883655 is in state 'finished'
[2025-11-26 18:47:53] 2025-11-26 23:47:12,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:47:53] 2025-11-26 23:47:14,514 | INFO     | PID=321204 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 18:47:53] 2025-11-26 23:47:14,514 | INFO     | .. there are 69 such processes running
[2025-11-26 18:47:53] 2025-11-26 23:47:15,064 | INFO     | monitor loop #1724: job 0:6895883655 is in state 'finished'
[2025-11-26 18:47:53] 2025-11-26 23:47:15,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:47:53] 2025-11-26 23:47:15,517 | INFO     | time since job start (30751s) is within the limit (172800.0s)
[2025-11-26 18:47:53] 2025-11-26 23:47:15,606 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 18:47:53] 2025-11-26 23:47:15,615 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.032406250001
[2025-11-26 18:47:53] 2025-11-26 23:47:15,628 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895883655/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:47:53] 2025-11-26 23:47:15,628 | INFO     | extracted standard info from prmon json
[2025-11-26 18:47:53] 2025-11-26 23:47:15,628 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:47:53] 2025-11-26 23:47:15,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:47:53] 2025-11-26 23:47:15,633 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:47:53] 2025-11-26 23:47:15,633 | INFO     | sum of square deviations: 39229450610.86798
[2025-11-26 18:47:53] 2025-11-26 23:47:15,637 | INFO     | sum of deviations: 1204065119094.2715
[2025-11-26 18:47:53] 2025-11-26 23:47:15,637 | INFO     | mean x: 1764185490.195219
[2025-11-26 18:47:53] 2025-11-26 23:47:15,637 | INFO     | mean y: 3315177.364541833
[2025-11-26 18:47:53] 2025-11-26 23:47:15,637 | INFO     | intersect: -54144631818.55422
[2025-11-26 18:47:53] 2025-11-26 23:47:15,637 | INFO     | chi2: 21.442724970001578
[2025-11-26 18:47:53] 2025-11-26 23:47:15,637 | INFO     | sum of square deviations: 38069213973.85483
[2025-11-26 18:47:53] 2025-11-26 23:47:15,641 | INFO     | sum of deviations: 1408784980765.379
[2025-11-26 18:47:53] 2025-11-26 23:47:15,641 | INFO     | mean x: 1764185337.7122736
[2025-11-26 18:47:53] 2025-11-26 23:47:15,641 | INFO     | mean y: 3342074.38028169
[2025-11-26 18:47:53] 2025-11-26 23:47:15,641 | INFO     | intersect: -65281898875.49704
[2025-11-26 18:47:53] 2025-11-26 23:47:15,641 | INFO     | chi2: 17.352636086099395
[2025-11-26 18:47:53] 2025-11-26 23:47:15,641 | INFO     | current chi2=17.352636086099395 (change=19.074482789030906 %)
[2025-11-26 18:47:53] 2025-11-26 23:47:15,641 | INFO     | right removable region: 496
[2025-11-26 18:47:53] 2025-11-26 23:47:15,642 | INFO     | sum of square deviations: 38068694863.85482
[2025-11-26 18:47:53] 2025-11-26 23:47:15,645 | INFO     | sum of deviations: 971085273009.8282
[2025-11-26 18:47:53] 2025-11-26 23:47:15,645 | INFO     | mean x: 1764185642.7122736
[2025-11-26 18:47:53] 2025-11-26 23:47:15,645 | INFO     | mean y: 3345777.2575452714
[2025-11-26 18:47:53] 2025-11-26 23:47:15,645 | INFO     | intersect: -44998845724.712746
[2025-11-26 18:47:53] 2025-11-26 23:47:15,645 | INFO     | chi2: 17.36609870480228
[2025-11-26 18:47:53] 2025-11-26 23:47:15,645 | INFO     | current chi2=17.36609870480228 (change=19.011698703884456 %)
[2025-11-26 18:47:53] 2025-11-26 23:47:15,645 | INFO     | left removable region: 10
[2025-11-26 18:47:53] 2025-11-26 23:47:15,646 | INFO     | sum of square deviations: 35596698531.37436
[2025-11-26 18:47:53] 2025-11-26 23:47:15,649 | INFO     | sum of deviations: 1003313285419.0193
[2025-11-26 18:47:53] 2025-11-26 23:47:15,649 | INFO     | mean x: 1764185612.2510288
[2025-11-26 18:47:53] 2025-11-26 23:47:15,649 | INFO     | mean y: 3408222.9588477365
[2025-11-26 18:47:53] 2025-11-26 23:47:15,649 | INFO     | intersect: -49721171183.09104
[2025-11-26 18:47:53] 2025-11-26 23:47:15,649 | INFO     | chi2: 9.12967855128745
[2025-11-26 18:47:53] 2025-11-26 23:47:15,649 | INFO     | current memory leak: 28.19 B/s (using 486 data points, chi2=9.13)
[2025-11-26 18:47:53] 2025-11-26 23:47:15,650 | INFO     | could have reported an average CPU frequency of 3798 MHz (20 samples)
[2025-11-26 18:47:53] 2025-11-26 23:47:15,650 | INFO     | ..............................
[2025-11-26 18:47:53] 2025-11-26 23:47:15,650 | INFO     | . Timing measurements:
[2025-11-26 18:47:53] 2025-11-26 23:47:15,650 | INFO     | . get job = 0 s
[2025-11-26 18:47:53] 2025-11-26 23:47:15,650 | INFO     | . initial setup = 5 s
[2025-11-26 18:47:53] 2025-11-26 23:47:15,650 | INFO     | . payload setup = 35 s
[2025-11-26 18:47:53] 2025-11-26 23:47:15,650 | INFO     | . stage-in = 0 s
[2025-11-26 18:47:53] 2025-11-26 23:47:15,650 | INFO     | . payload execution = 30606 s
[2025-11-26 18:47:53] 2025-11-26 23:47:15,650 | INFO     | . stage-out = 6 s
[2025-11-26 18:47:53] 2025-11-26 23:47:15,650 | INFO     | . log creation = 1 s
[2025-11-26 18:47:53] 2025-11-26 23:47:15,650 | INFO     | ..............................
[2025-11-26 18:47:53] 2025-11-26 23:47:15,727 | INFO     | 
[2025-11-26 18:47:53] 2025-11-26 23:47:15,731 | INFO     | job summary report
[2025-11-26 18:47:53] 2025-11-26 23:47:15,731 | INFO     | --------------------------------------------------
[2025-11-26 18:47:53] 2025-11-26 23:47:15,731 | INFO     | PanDA job id: 6895883655
[2025-11-26 18:47:53] 2025-11-26 23:47:15,731 | INFO     | task id: 47556149
[2025-11-26 18:47:53] 2025-11-26 23:47:15,731 | INFO     | errors: (none)
[2025-11-26 18:47:53] 2025-11-26 23:47:15,731 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:47:53] 2025-11-26 23:47:15,731 | INFO     | pilot state: finished 
[2025-11-26 18:47:53] 2025-11-26 23:47:15,731 | INFO     | transexitcode: 0
[2025-11-26 18:47:53] 2025-11-26 23:47:15,731 | INFO     | exeerrorcode: 0
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | exeerrordiag: 
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | exitcode: 0
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | exitmsg: OK
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | cpuconsumptiontime: 136848 s
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | nevents: 1000
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | neventsw: 0
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | pid: 342268
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | pgrp: 342268
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | corecount: 9
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | event service: False
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | sizes: {0: 2284144, 1: 2284343, 11: 2284343, 22: 2284371, 25: 2284661, 33: 2284689, 30647: 2323690, 30653: 2332684, 30656: 2332740, 30690: 2332986}
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | --------------------------------------------------
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | 
[2025-11-26 18:47:53] 2025-11-26 23:47:15,732 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 18:47:53] 2025-11-26 23:47:15,939 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:47:53] 2025-11-26 23:47:15,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,941 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:47:53] 2025-11-26 23:47:15,941 | INFO     | job 6895883655 has completed (purged errors)
[2025-11-26 18:47:53] 2025-11-26 23:47:15,941 | INFO     | overall cleanup function is called
[2025-11-26 18:47:53] 2025-11-26 23:47:16,969 | INFO     | --- collectZombieJob: --- 10, [342268]
[2025-11-26 18:47:53] 2025-11-26 23:47:16,969 | INFO     | zombie collector waiting for pid 342268
[2025-11-26 18:47:53] 2025-11-26 23:47:16,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:47:53] 2025-11-26 23:47:16,969 | INFO     | collected zombie processes
[2025-11-26 18:47:53] 2025-11-26 23:47:16,969 | INFO     | will attempt to kill all subprocesses of pid=342268
[2025-11-26 18:47:53] 2025-11-26 23:47:18,366 | INFO     | process IDs to be killed: [342268] (in reverse order)
[2025-11-26 18:47:53] 2025-11-26 23:47:18,719 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:47:53] 2025-11-26 23:47:18,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:47:53] 2025-11-26 23:47:18,818 | INFO     | did not find any defunct processes belonging to 342268
[2025-11-26 18:47:53] 2025-11-26 23:47:18,875 | INFO     | did not find any defunct processes belonging to 342268
[2025-11-26 18:47:53] 2025-11-26 23:47:18,877 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:47:53] 2025-11-26 23:47:18,877 | INFO     | ready for new job
[2025-11-26 18:47:53] 2025-11-26 23:47:18,877 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:47:53] 2025-11-26 23:47:18,879 | INFO     | ***************************************
[2025-11-26 18:47:53] 2025-11-26 23:47:18,879 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:47:53] 2025-11-26 23:47:18,879 | INFO     | ***************************************
[2025-11-26 18:47:53] 2025-11-26 23:47:18,879 | INFO     | 
[2025-11-26 18:47:53] 2025-11-26 23:47:18,884 | INFO     | architecture information:
[2025-11-26 18:47:53] 2025-11-26 23:47:18,897 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:47:53] 2025-11-26 23:47:18,921 | INFO     | cat /etc/os-release:
[2025-11-26 18:47:53] NAME="CentOS Linux"
[2025-11-26 18:47:53] VERSION="7 (Core)"
[2025-11-26 18:47:53] ID="centos"
[2025-11-26 18:47:53] ID_LIKE="rhel fedora"
[2025-11-26 18:47:53] VERSION_ID="7"
[2025-11-26 18:47:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:47:53] ANSI_COLOR="0;31"
[2025-11-26 18:47:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:47:53] HOME_URL="https://www.centos.org/"
[2025-11-26 18:47:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:47:53] 
[2025-11-26 18:47:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:47:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:47:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:47:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:47:53] 
[2025-11-26 18:47:53] 2025-11-26 23:47:18,921 | INFO     | ***************************************
[2025-11-26 18:47:53] 2025-11-26 23:47:19,423 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 18:47:53] 2025-11-26 23:47:19,504 | INFO     | sufficient remaining disk space (158315053056 B)
[2025-11-26 18:47:53] 2025-11-26 23:47:19,504 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:47:53] 2025-11-26 23:47:19,504 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:47:53] 2025-11-26 23:47:19,504 | INFO     | update_server=False
[2025-11-26 18:47:53] 2025-11-26 23:47:19,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:47:53] 2025-11-26 23:47:19,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:47:53] 2025-11-26 23:47:19,505 | INFO     | aborting loop
[2025-11-26 18:47:53] 2025-11-26 23:47:19,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:47:53] 2025-11-26 23:47:19,924 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:47:53] 2025-11-26 23:47:20,385 | INFO     | all data control threads have been joined
[2025-11-26 18:47:53] 2025-11-26 23:47:20,510 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:20,511 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:20,576 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:20,597 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:20,600 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:20,705 | INFO     | all payload control threads have been joined
[2025-11-26 18:47:53] 2025-11-26 23:47:20,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:47:53] 2025-11-26 23:47:20,803 | INFO     | all job control threads have been joined
[2025-11-26 18:47:53] 2025-11-26 23:47:21,317 | INFO     | [job] validate thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:21,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:21,388 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:21,394 | INFO     | [data] control thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:21,515 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:21,564 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:21,725 | INFO     | [payload] control thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:21,809 | INFO     | [job] control thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:21,829 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:21,944 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:23,950 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:47:53] 2025-11-26 23:47:41,200 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:47:53] 2025-11-26 23:47:41,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744079161152)>', '<ExcThread(monitor, started 139743589291776)>']
[2025-11-26 18:47:53] 2025-11-26 23:47:46,627 | INFO     | all workflow threads have been joined
[2025-11-26 18:47:53] 2025-11-26 23:47:46,627 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:47:53] 2025-11-26 23:47:46,636 | INFO     | traces error code: 0
[2025-11-26 18:47:53] 2025-11-26 23:47:46,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:47:53] 2025-11-26 23:47:49,938 | INFO     | PID=321204 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 18:47:53] 2025-11-26 23:47:49,938 | INFO     | .. there are 69 such processes running
[2025-11-26 18:47:53] 2025-11-26 23:47:49,939 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:47:53] 2025-11-26 23:47:49,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:47:53] 2025-11-26 23:47:49,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:47:53] 2025-11-26 23:47:49,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:47:53] 2025-11-26 23:47:49,939 | INFO     | [monitor] control thread has ended
[2025-11-26 18:47:53] 2025-11-26 23:47:51,738 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:47:53] 2025-11-26 23:47:51,926 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:47:53] 2025-11-26 23:47:51,969 [wrapper] pilotpid: 321204
[2025-11-26 18:47:53] 2025-11-26 23:47:52,002 [wrapper] Pilot exit status: 0
[2025-11-26 18:47:53] 2025-11-26 23:47:52,110 [wrapper] pandaids: 6895883655
[2025-11-26 18:47:53] 2025-11-26 23:47:52,419 [wrapper] cleanup supervisor_pilot  596573 321205
[2025-11-26 18:47:53] 2025-11-26 23:47:52,465 [wrapper] Test setup, not cleaning
[2025-11-26 18:47:53] 2025-11-26 23:47:52,594 [wrapper] apfmon messages muted
[2025-11-26 18:47:53] 2025-11-26 23:47:52,640 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:47:53] 2025-11-26 23:47:52,675 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:47:53]  *** Error codes and diagnostics ***
[2025-11-26 18:47:53]     "exeErrorCode": 0,
[2025-11-26 18:47:53]     "exeErrorDiag": "",
[2025-11-26 18:47:53]     "pilotErrorCode": 0,
[2025-11-26 18:47:53]     "pilotErrorDiag": "",
[2025-11-26 18:47:53]  *** Listing of results directory ***
[2025-11-26 18:47:53] total 1311280
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 12:01 queuedata.json
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-26 18:47:53] -rwx------. 1 boincer umatlas     36292 Nov 24 12:02 runpilot2-wrapper.sh
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas       100 Nov 26 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:47:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 10:13 run_atlas
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas       105 Nov 26 10:13 job.xml
[2025-11-26 18:47:53] -rw-r--r--. 2 boincer umatlas 409519141 Nov 26 10:13 EVNT.47483658._001397.pool.root.1
[2025-11-26 18:47:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 10:13 shared
[2025-11-26 18:47:53] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 10:13 input.tar.gz
[2025-11-26 18:47:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:13 start_atlas.sh
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas         0 Nov 26 10:13 boinc_lockfile
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 10:13 pandaJob.out
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas      2073 Nov 26 10:13 stderr.txt
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas        57 Nov 26 10:13 setup.sh.local
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas    992360 Nov 26 10:14 agis_schedconf.cvmfs.json
[2025-11-26 18:47:53] drwx------. 5 boincer umatlas      4096 Nov 26 10:14 pilot3
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas       533 Nov 26 18:28 boinc_task_state.xml
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas 918185327 Nov 26 18:45 HITS.47556149._003838.pool.root.1
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas      1077 Nov 26 18:46 memory_monitor_summary.json
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas   1516240 Nov 26 18:46 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas   1855026 Nov 26 18:46 log.47556149._003838.job.log.tgz.1
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas      7174 Nov 26 18:46 init_data.xml
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas      8650 Nov 26 18:47 heartbeat.json
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas        95 Nov 26 18:47 pilot_heartbeat.json
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas        29 Nov 26 18:47 wrapper_checkpoint.txt
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas       822 Nov 26 18:47 pilotlog.txt
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas   3720155 Nov 26 18:47 log.47556149._003838.job.log.1
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas       353 Nov 26 18:47 output.list
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas       620 Nov 26 18:47 runtime_log
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas   5591040 Nov 26 18:47 result.tar.gz
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 18:47 runtime_log.err
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas       664 Nov 26 18:47 CE6LDmg8oh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmU8IKDm3WmoJm.diag
[2025-11-26 18:47:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 18:47 boinc_mmap_file
[2025-11-26 18:47:53] HITS file was successfully produced:
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas 918185327 Nov 26 18:45 shared/HITS.pool.root.1
[2025-11-26 18:47:53]  *** Contents of shared directory: ***
[2025-11-26 18:47:53] total 1302656
[2025-11-26 18:47:53] -rw-r--r--. 2 boincer umatlas 409519141 Nov 26 10:13 ATLAS.root_0
[2025-11-26 18:47:53] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 10:13 input.tar.gz
[2025-11-26 18:47:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 10:13 start_atlas.sh
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas 918185327 Nov 26 18:45 HITS.pool.root.1
[2025-11-26 18:47:53] -rw-------. 1 boincer umatlas   5591040 Nov 26 18:47 result.tar.gz
18:47:55 (311896): run_atlas exited; CPU time 137307.407634
18:47:55 (311896): called boinc_finish(0)

</stderr_txt>
]]>

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