Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:49:04 (829833): wrapper (7.7.26015): starting
08:49:04 (829833): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 08:49:04] Arguments: --nthreads 8
[2025-11-26 08:49:04] Threads: 8
[2025-11-26 08:49:04] Checking for CVMFS
[2025-11-26 08:49:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:49:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:49:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:49:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:49:05] 2.13.3.0 11754 30085 151544 153323 2 594 30061323 32935937 17061 16776704 0 161198164 99.578 167849521 6962 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 08:49:05] CVMFS is ok
[2025-11-26 08:49:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:49:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:49:05] Further information can be found at the LHC@home message board.
[2025-11-26 08:49:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:49:05] Checking for apptainer binary...
[2025-11-26 08:49:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:49:05] Running /usr/bin/apptainer --version
[2025-11-26 08:49:05] apptainer version 1.4.4-1.el9
[2025-11-26 08:49:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:49:05] c7-2-38.aglt2.org
[2025-11-26 08:49:05] apptainer works
[2025-11-26 08:49:05] Set ATHENA_PROC_NUMBER=8
[2025-11-26 08:49:05] Set ATHENA_CORE_NUMBER=8
[2025-11-26 08:49:05] Starting ATLAS job with PandaID=6897139444
[2025-11-26 08:49:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:19:38]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:19:38] 2025-11-27 10:18:23,337 | INFO     | job 6897139444 has finished - writing final server update
[2025-11-27 05:19:38] 2025-11-27 10:18:23,337 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 05:19:38] 2025-11-27 10:18:23,348 | INFO     | executing command: lscpu
[2025-11-27 05:19:38] 2025-11-27 10:18:23,463 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 05:19:38] 2025-11-27 10:18:24,142 | INFO     | monitor loop #3991: job 0:6897139444 is in state 'finished'
[2025-11-27 05:19:38] 2025-11-27 10:18:24,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:19:38] 2025-11-27 10:18:25,042 | INFO     | time since job start (73748s) is within the limit (172800.0s)
[2025-11-27 05:19:38] 2025-11-27 10:18:26,648 | INFO     | monitor loop #3992: job 0:6897139444 is in state 'finished'
[2025-11-27 05:19:38] 2025-11-27 10:18:26,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:19:38] 2025-11-27 10:18:27,049 | INFO     | time since job start (73750s) is within the limit (172800.0s)
[2025-11-27 05:19:38] 2025-11-27 10:18:29,056 | INFO     | time since job start (73752s) is within the limit (172800.0s)
[2025-11-27 05:19:38] 2025-11-27 10:18:29,153 | INFO     | monitor loop #3993: job 0:6897139444 is in state 'finished'
[2025-11-27 05:19:38] 2025-11-27 10:18:29,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:19:38] 2025-11-27 10:18:31,093 | INFO     | time since job start (73754s) is within the limit (172800.0s)
[2025-11-27 05:19:38] 2025-11-27 10:18:31,672 | INFO     | monitor loop #3994: job 0:6897139444 is in state 'finished'
[2025-11-27 05:19:38] 2025-11-27 10:18:31,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:19:38] 2025-11-27 10:18:32,483 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 05:19:38] 2025-11-27 10:18:32,523 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3116.9983333333325
[2025-11-27 05:19:38] 2025-11-27 10:18:32,541 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6897139444/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:19:38] 2025-11-27 10:18:32,542 | INFO     | extracted standard info from prmon json
[2025-11-27 05:19:38] 2025-11-27 10:18:32,542 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:19:38] 2025-11-27 10:18:32,542 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:19:38] 2025-11-27 10:18:32,559 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:19:38] 2025-11-27 10:18:32,561 | INFO     | sum of square deviations: 547965835471.9674
[2025-11-27 05:19:38] 2025-11-27 10:18:32,588 | INFO     | sum of deviations: 3012175220721.184
[2025-11-27 05:19:38] 2025-11-27 10:18:32,589 | INFO     | mean x: 1764201832.7411084
[2025-11-27 05:19:38] 2025-11-27 10:18:32,589 | INFO     | mean y: 2816647.8312655087
[2025-11-27 05:19:38] 2025-11-27 10:18:32,589 | INFO     | intersect: -9695023438.050367
[2025-11-27 05:19:38] 2025-11-27 10:18:32,590 | INFO     | chi2: 15.77541147116925
[2025-11-27 05:19:38] 2025-11-27 10:18:32,591 | INFO     | sum of square deviations: 541195913326.7473
[2025-11-27 05:19:38] 2025-11-27 10:18:32,618 | INFO     | sum of deviations: 3412566876823.931
[2025-11-27 05:19:38] 2025-11-27 10:18:32,619 | INFO     | mean x: 1764201680.248339
[2025-11-27 05:19:38] 2025-11-27 10:18:32,619 | INFO     | mean y: 2825665.0938538206
[2025-11-27 05:19:38] 2025-11-27 10:18:32,619 | INFO     | intersect: -11121530727.482512
[2025-11-27 05:19:38] 2025-11-27 10:18:32,620 | INFO     | chi2: 12.446151227104489
[2025-11-27 05:19:38] 2025-11-27 10:18:32,621 | INFO     | current chi2=12.446151227104489 (change=21.10411034380456 %)
[2025-11-27 05:19:38] 2025-11-27 10:18:32,621 | INFO     | right removable region: 1203
[2025-11-27 05:19:38] 2025-11-27 10:18:32,622 | INFO     | sum of square deviations: 541194629276.7469
[2025-11-27 05:19:38] 2025-11-27 10:18:32,732 | INFO     | sum of deviations: 2625788956382.788
[2025-11-27 05:19:38] 2025-11-27 10:18:32,732 | INFO     | mean x: 1764201985.248339
[2025-11-27 05:19:38] 2025-11-27 10:18:32,732 | INFO     | mean y: 2825347.0174418604
[2025-11-27 05:19:38] 2025-11-27 10:18:32,732 | INFO     | intersect: -8556797825.674521
[2025-11-27 05:19:38] 2025-11-27 10:18:32,734 | INFO     | chi2: 13.084044514107823
[2025-11-27 05:19:38] 2025-11-27 10:18:32,734 | INFO     | current chi2=13.084044514107823 (change=17.060518275419323 %)
[2025-11-27 05:19:38] 2025-11-27 10:18:32,734 | INFO     | left removable region: 10
[2025-11-27 05:19:38] 2025-11-27 10:18:32,757 | INFO     | sum of square deviations: 526496312754.8136
[2025-11-27 05:19:38] 2025-11-27 10:18:32,798 | INFO     | sum of deviations: 2811578340263.803
[2025-11-27 05:19:38] 2025-11-27 10:18:32,799 | INFO     | mean x: 1764201954.7644594
[2025-11-27 05:19:38] 2025-11-27 10:18:32,799 | INFO     | mean y: 2842743.721709975
[2025-11-27 05:19:38] 2025-11-27 10:18:32,799 | INFO     | intersect: -9418290669.185493
[2025-11-27 05:19:38] 2025-11-27 10:18:32,800 | INFO     | chi2: 7.833264507577935
[2025-11-27 05:19:38] 2025-11-27 10:18:32,800 | INFO     | current memory leak: 5.34 B/s (using 1193 data points, chi2=7.83)
[2025-11-27 05:19:38] 2025-11-27 10:18:32,802 | INFO     | could have reported an average CPU frequency of 3125 MHz (44 samples)
[2025-11-27 05:19:38] 2025-11-27 10:18:32,802 | INFO     | ..............................
[2025-11-27 05:19:38] 2025-11-27 10:18:32,802 | INFO     | . Timing measurements:
[2025-11-27 05:19:38] 2025-11-27 10:18:32,802 | INFO     | . get job = 0 s
[2025-11-27 05:19:38] 2025-11-27 10:18:32,802 | INFO     | . initial setup = 2 s
[2025-11-27 05:19:38] 2025-11-27 10:18:32,803 | INFO     | . payload setup = 7 s
[2025-11-27 05:19:38] 2025-11-27 10:18:32,803 | INFO     | . stage-in = 0 s
[2025-11-27 05:19:38] 2025-11-27 10:18:32,803 | INFO     | . payload execution = 73712 s
[2025-11-27 05:19:38] 2025-11-27 10:18:32,803 | INFO     | . stage-out = 4 s
[2025-11-27 05:19:38] 2025-11-27 10:18:32,803 | INFO     | . log creation = 1 s
[2025-11-27 05:19:38] 2025-11-27 10:18:32,803 | INFO     | ..............................
[2025-11-27 05:19:38] 2025-11-27 10:18:32,889 | INFO     | 
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | job summary report
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | --------------------------------------------------
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | PanDA job id: 6897139444
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | task id: 47556161
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | errors: (none)
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | pilot state: finished 
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | transexitcode: 0
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | exeerrorcode: 0
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | exeerrordiag: 
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | exitcode: 0
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | exitmsg: OK
[2025-11-27 05:19:38] 2025-11-27 10:18:32,890 | INFO     | cpuconsumptiontime: 208109 s
[2025-11-27 05:19:38] 2025-11-27 10:18:32,891 | INFO     | nevents: 1000
[2025-11-27 05:19:38] 2025-11-27 10:18:32,891 | INFO     | neventsw: 0
[2025-11-27 05:19:38] 2025-11-27 10:18:32,891 | INFO     | pid: 862187
[2025-11-27 05:19:38] 2025-11-27 10:18:32,891 | INFO     | pgrp: 862187
[2025-11-27 05:19:38] 2025-11-27 10:18:32,891 | INFO     | corecount: 8
[2025-11-27 05:19:38] 2025-11-27 10:18:32,891 | INFO     | event service: False
[2025-11-27 05:19:38] 2025-11-27 10:18:32,891 | INFO     | sizes: {0: 2284259, 7: 2284521, 11: 2284549, 73720: 2343220, 73724: 2352214, 73728: 2352270, 73739: 2352644}
[2025-11-27 05:19:38] 2025-11-27 10:18:32,891 | INFO     | --------------------------------------------------
[2025-11-27 05:19:38] 2025-11-27 10:18:32,891 | INFO     | 
[2025-11-27 05:19:38] 2025-11-27 10:18:32,891 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 05:19:38] 2025-11-27 10:18:32,932 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,932 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,932 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,932 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:19:38] 2025-11-27 10:18:32,933 | INFO     | job 6897139444 has completed (purged errors)
[2025-11-27 05:19:38] 2025-11-27 10:18:32,934 | INFO     | overall cleanup function is called
[2025-11-27 05:19:38] 2025-11-27 10:18:33,968 | INFO     | --- collectZombieJob: --- 10, [862187]
[2025-11-27 05:19:38] 2025-11-27 10:18:33,968 | INFO     | zombie collector waiting for pid 862187
[2025-11-27 05:19:38] 2025-11-27 10:18:33,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:19:38] 2025-11-27 10:18:33,968 | INFO     | collected zombie processes
[2025-11-27 05:19:38] 2025-11-27 10:18:33,969 | INFO     | will attempt to kill all subprocesses of pid=862187
[2025-11-27 05:19:38] 2025-11-27 10:18:35,079 | INFO     | process IDs to be killed: [862187] (in reverse order)
[2025-11-27 05:19:38] 2025-11-27 10:18:35,298 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:19:38] 2025-11-27 10:18:35,299 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:19:38] 2025-11-27 10:18:35,419 | INFO     | did not find any defunct processes belonging to 862187
[2025-11-27 05:19:38] 2025-11-27 10:18:35,520 | INFO     | did not find any defunct processes belonging to 862187
[2025-11-27 05:19:38] 2025-11-27 10:18:35,522 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:19:38] 2025-11-27 10:18:35,522 | INFO     | ready for new job
[2025-11-27 05:19:38] 2025-11-27 10:18:35,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:19:38] 2025-11-27 10:18:35,528 | INFO     | ***************************************
[2025-11-27 05:19:38] 2025-11-27 10:18:35,529 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:19:38] 2025-11-27 10:18:35,529 | INFO     | ***************************************
[2025-11-27 05:19:38] 2025-11-27 10:18:35,529 | INFO     | 
[2025-11-27 05:19:38] 2025-11-27 10:18:35,534 | INFO     | architecture information:
[2025-11-27 05:19:38] 2025-11-27 10:18:35,536 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:19:38] 2025-11-27 10:18:35,629 | INFO     | cat /etc/os-release:
[2025-11-27 05:19:38] NAME="CentOS Linux"
[2025-11-27 05:19:38] VERSION="7 (Core)"
[2025-11-27 05:19:38] ID="centos"
[2025-11-27 05:19:38] ID_LIKE="rhel fedora"
[2025-11-27 05:19:38] VERSION_ID="7"
[2025-11-27 05:19:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:19:38] ANSI_COLOR="0;31"
[2025-11-27 05:19:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:19:38] HOME_URL="https://www.centos.org/"
[2025-11-27 05:19:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:19:38] 
[2025-11-27 05:19:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:19:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:19:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:19:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:19:38] 
[2025-11-27 05:19:38] 2025-11-27 10:18:35,629 | INFO     | ***************************************
[2025-11-27 05:19:38] 2025-11-27 10:18:36,133 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 05:19:38] 2025-11-27 10:18:36,159 | INFO     | sufficient remaining disk space (66015199232 B)
[2025-11-27 05:19:38] 2025-11-27 10:18:36,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:19:38] 2025-11-27 10:18:36,160 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:19:38] 2025-11-27 10:18:36,160 | INFO     | update_server=False
[2025-11-27 05:19:38] 2025-11-27 10:18:36,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:19:38] 2025-11-27 10:18:36,161 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:19:38] 2025-11-27 10:18:36,161 | INFO     | aborting loop
[2025-11-27 05:19:38] 2025-11-27 10:18:36,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:19:38] 2025-11-27 10:18:36,376 | INFO     | all payload control threads have been joined
[2025-11-27 05:19:38] 2025-11-27 10:18:36,412 | INFO     | all data control threads have been joined
[2025-11-27 05:19:38] 2025-11-27 10:18:36,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:19:38] 2025-11-27 10:18:37,166 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:37,167 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:37,257 | INFO     | all job control threads have been joined
[2025-11-27 05:19:38] 2025-11-27 10:18:37,360 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:37,382 | INFO     | [payload] control thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:37,418 | INFO     | [data] control thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:37,505 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:37,584 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:37,592 | INFO     | [job] validate thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:37,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:19:38] 2025-11-27 10:18:38,269 | INFO     | [job] control thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:38,347 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:38,360 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:38,370 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:38,371 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:38,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:38,911 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:18:40,944 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:19:38] 2025-11-27 10:19:05,251 | INFO     | PID=839768 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 05:19:38] 2025-11-27 10:19:05,251 | INFO     | .. there are 19 such processes running
[2025-11-27 05:19:38] 2025-11-27 10:19:05,253 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:19:38] 2025-11-27 10:19:05,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:19:38] 2025-11-27 10:19:05,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:19:38] 2025-11-27 10:19:26,608 [wrapper] supervise_pilot (15 min periods counter: 83)
[2025-11-27 05:19:38] 2025-11-27 10:19:31,253 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:19:38] 2025-11-27 10:19:32,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120897337152)>', '<ExcThread(monitor, started 140119877084928)>']
[2025-11-27 05:19:38] 2025-11-27 10:19:33,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:19:38] 2025-11-27 10:19:33,464 | INFO     | [monitor] control thread has ended
[2025-11-27 05:19:38] 2025-11-27 10:19:37,896 | INFO     | all workflow threads have been joined
[2025-11-27 05:19:38] 2025-11-27 10:19:37,897 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:19:38] 2025-11-27 10:19:37,897 | INFO     | traces error code: 0
[2025-11-27 05:19:38] 2025-11-27 10:19:37,897 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:19:38] 2025-11-27 10:19:38,269 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:19:38] 2025-11-27 10:19:38,273 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:19:38] 2025-11-27 10:19:38,275 [wrapper] pilotpid: 839768
[2025-11-27 05:19:38] 2025-11-27 10:19:38,277 [wrapper] Pilot exit status: 0
[2025-11-27 05:19:38] 2025-11-27 10:19:38,293 [wrapper] pandaids: 6897139444
[2025-11-27 05:19:38] 2025-11-27 10:19:38,406 [wrapper] cleanup supervisor_pilot  467262 839770
[2025-11-27 05:19:38] 2025-11-27 10:19:38,410 [wrapper] Test setup, not cleaning
[2025-11-27 05:19:38] 2025-11-27 10:19:38,416 [wrapper] apfmon messages muted
[2025-11-27 05:19:38] 2025-11-27 10:19:38,419 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:19:38] 2025-11-27 10:19:38,421 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:19:38]  *** Error codes and diagnostics ***
[2025-11-27 05:19:38]     "exeErrorCode": 0,
[2025-11-27 05:19:38]     "exeErrorDiag": "",
[2025-11-27 05:19:38]     "pilotErrorCode": 0,
[2025-11-27 05:19:38]     "pilotErrorDiag": "",
[2025-11-27 05:19:38]  *** Listing of results directory ***
[2025-11-27 05:19:38] total 1310776
[2025-11-27 05:19:38] -rwx------. 1 boincer umatlas     36292 Nov 25 11:48 runpilot2-wrapper.sh
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:48 queuedata.json
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas       100 Nov 26 08:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:19:38] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 08:49 run_atlas
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas       105 Nov 26 08:49 job.xml
[2025-11-27 05:19:38] -rw-r--r--. 2 boincer umatlas 408566948 Nov 26 08:49 EVNT.47483658._002180.pool.root.1
[2025-11-27 05:19:38] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:49 start_atlas.sh
[2025-11-27 05:19:38] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 08:49 shared
[2025-11-27 05:19:38] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 08:49 input.tar.gz
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas         0 Nov 26 08:49 boinc_lockfile
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas      2783 Nov 26 08:49 pandaJob.out
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas        57 Nov 26 08:49 setup.sh.local
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas    991830 Nov 26 08:49 agis_schedconf.cvmfs.json
[2025-11-27 05:19:38] drwx------. 5 boincer umatlas      4096 Nov 26 08:49 pilot3
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas       533 Nov 27 04:56 boinc_task_state.xml
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas      6946 Nov 27 05:09 init_data.xml
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas 907754107 Nov 27 05:17 HITS.47556161._001631.pool.root.1
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas      1062 Nov 27 05:18 memory_monitor_summary.json
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas   1516240 Nov 27 05:18 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas   2258993 Nov 27 05:18 log.47556161._001631.job.log.tgz.1
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas      8607 Nov 27 05:18 heartbeat.json
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas        95 Nov 27 05:19 pilot_heartbeat.json
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 05:19 boinc_mmap_file
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas        29 Nov 27 05:19 wrapper_checkpoint.txt
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas      4823 Nov 27 05:19 pilotlog.txt
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas   8736016 Nov 27 05:19 log.47556161._001631.job.log.1
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas       353 Nov 27 05:19 output.list
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas       620 Nov 27 05:19 runtime_log
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas  11018240 Nov 27 05:19 result.tar.gz
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 05:19 runtime_log.err
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas       664 Nov 27 05:19 5HFKDmSOBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6OMKDmIGmZSm.diag
[2025-11-27 05:19:38] -rw-r--r--. 1 boincer umatlas     21755 Nov 27 05:19 stderr.txt
[2025-11-27 05:19:38] HITS file was successfully produced:
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas 907754107 Nov 27 05:17 shared/HITS.pool.root.1
[2025-11-27 05:19:38]  *** Contents of shared directory: ***
[2025-11-27 05:19:38] total 1296836
[2025-11-27 05:19:38] -rw-r--r--. 2 boincer umatlas 408566948 Nov 26 08:49 ATLAS.root_0
[2025-11-27 05:19:38] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:49 start_atlas.sh
[2025-11-27 05:19:38] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 08:49 input.tar.gz
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas 907754107 Nov 27 05:17 HITS.pool.root.1
[2025-11-27 05:19:38] -rw-------. 1 boincer umatlas  11018240 Nov 27 05:19 result.tar.gz
05:19:40 (829833): run_atlas exited; CPU time 209836.385854
05:19:40 (829833): called boinc_finish(0)

</stderr_txt>
]]>

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