Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:03:19 (48730): wrapper (7.7.26015): starting
12:03:19 (48730): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 12:03:19] Arguments: --nthreads 8
[2025-11-26 12:03:19] Threads: 8
[2025-11-26 12:03:19] Checking for CVMFS
[2025-11-26 12:03:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 12:03:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 12:03:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 12:03:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 12:03:19] 2.13.3.0 12548 30323 386148 153328 0 748 39663150 40960001 32345 16776704 34 147447294 99.618 140290144 35618 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 12:03:19] CVMFS is ok
[2025-11-26 12:03:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 12:03:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 12:03:19] Further information can be found at the LHC@home message board.
[2025-11-26 12:03:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 12:03:19] Checking for apptainer binary...
[2025-11-26 12:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 12:03:19] Running /usr/bin/apptainer --version
[2025-11-26 12:03:19] apptainer version 1.4.4-1.el9
[2025-11-26 12:03:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 12:03:19] c7-11-12.aglt2.org
[2025-11-26 12:03:19] apptainer works
[2025-11-26 12:03:20] Set ATHENA_PROC_NUMBER=8
[2025-11-26 12:03:20] Set ATHENA_CORE_NUMBER=8
[2025-11-26 12:03:20] Starting ATLAS job with PandaID=6894052119
[2025-11-26 12:03:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:01:20]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:01:20] 2025-11-26 21:00:45,754 | INFO     | 14234s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-26 16:01:20] 2025-11-26 21:00:46,500 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 16:01:20] 2025-11-26 21:00:46,505 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3228.5866093749996
[2025-11-26 16:01:20] 2025-11-26 21:00:46,517 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894052119/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:01:20] 2025-11-26 21:00:46,520 | INFO     | extracted standard info from prmon json
[2025-11-26 16:01:20] 2025-11-26 21:00:46,520 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:01:20] 2025-11-26 21:00:46,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:01:20] 2025-11-26 21:00:46,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 16:01:20] 2025-11-26 21:00:46,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 16:01:20] 2025-11-26 21:00:46,528 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:01:20] 2025-11-26 21:00:46,528 | INFO     | sum of square deviations: 3922358340.3175893
[2025-11-26 16:01:20] 2025-11-26 21:00:46,558 | INFO     | sum of deviations: 17300535389.012867
[2025-11-26 16:01:20] 2025-11-26 21:00:46,558 | INFO     | mean x: 1764183720.1072962
[2025-11-26 16:01:20] 2025-11-26 21:00:46,558 | INFO     | mean y: 2595812.6394849787
[2025-11-26 16:01:20] 2025-11-26 21:00:46,558 | INFO     | intersect: -7778774535.069584
[2025-11-26 16:01:20] 2025-11-26 21:00:46,559 | INFO     | chi2: 1.8307814697995601
[2025-11-26 16:01:20] 2025-11-26 21:00:46,559 | INFO     | sum of square deviations: 3675235750.258778
[2025-11-26 16:01:20] 2025-11-26 21:00:46,560 | INFO     | sum of deviations: 31944791136.02632
[2025-11-26 16:01:20] 2025-11-26 21:00:46,560 | INFO     | mean x: 1764183567.6096492
[2025-11-26 16:01:20] 2025-11-26 21:00:46,560 | INFO     | mean y: 2604686.0789473685
[2025-11-26 16:01:20] 2025-11-26 21:00:46,560 | INFO     | intersect: -15331507034.21869
[2025-11-26 16:01:20] 2025-11-26 21:00:46,584 | INFO     | chi2: 1.1419515309349622
[2025-11-26 16:01:20] 2025-11-26 21:00:46,584 | INFO     | current chi2=1.1419515309349622 (change=37.62491319840665 %)
[2025-11-26 16:01:20] 2025-11-26 21:00:46,584 | INFO     | sum of square deviations: 3438718010.1972914
[2025-11-26 16:01:20] 2025-11-26 21:00:46,585 | INFO     | sum of deviations: 31102419726.36326
[2025-11-26 16:01:20] 2025-11-26 21:00:46,585 | INFO     | mean x: 1764183415.1121075
[2025-11-26 16:01:20] 2025-11-26 21:00:46,586 | INFO     | mean y: 2604142.8654708522
[2025-11-26 16:01:20] 2025-11-26 21:00:46,586 | INFO     | intersect: -15954032280.47347
[2025-11-26 16:01:20] 2025-11-26 21:00:46,586 | INFO     | chi2: 1.142341994503443
[2025-11-26 16:01:20] 2025-11-26 21:00:46,586 | INFO     | current chi2=1.142341994503443 (change=-0.0341926568600628 %)
[2025-11-26 16:01:20] 2025-11-26 21:00:46,586 | INFO     | right removable region: 222
[2025-11-26 16:01:20] 2025-11-26 21:00:46,586 | INFO     | sum of square deviations: 3675220500.258778
[2025-11-26 16:01:20] 2025-11-26 21:00:46,587 | INFO     | sum of deviations: -7538367957.635964
[2025-11-26 16:01:20] 2025-11-26 21:00:46,588 | INFO     | mean x: 1764183872.6096492
[2025-11-26 16:01:20] 2025-11-26 21:00:46,588 | INFO     | mean y: 2610921.9254385964
[2025-11-26 16:01:20] 2025-11-26 21:00:46,588 | INFO     | intersect: 3621187596.6371465
[2025-11-26 16:01:20] 2025-11-26 21:00:46,588 | INFO     | chi2: 0.7529834446405369
[2025-11-26 16:01:20] 2025-11-26 21:00:46,588 | INFO     | current chi2=0.7529834446405369 (change=58.87092713894598 %)
[2025-11-26 16:01:20] 2025-11-26 21:00:46,588 | INFO     | sum of square deviations: 3438687510.1972914
[2025-11-26 16:01:20] 2025-11-26 21:00:46,589 | INFO     | sum of deviations: -2313904020.0941677
[2025-11-26 16:01:20] 2025-11-26 21:00:46,590 | INFO     | mean x: 1764184025.1121075
[2025-11-26 16:01:20] 2025-11-26 21:00:46,590 | INFO     | mean y: 2607597.923766816
[2025-11-26 16:01:20] 2025-11-26 21:00:46,590 | INFO     | intersect: 1189732771.6382596
[2025-11-26 16:01:20] 2025-11-26 21:00:46,590 | INFO     | chi2: 0.7077026604739552
[2025-11-26 16:01:20] 2025-11-26 21:00:46,590 | INFO     | current chi2=0.7077026604739552 (change=6.013516563859917 %)
[2025-11-26 16:01:20] 2025-11-26 21:00:46,590 | INFO     | left removable region: 20
[2025-11-26 16:01:20] 2025-11-26 21:00:46,590 | INFO     | sum of square deviations: 2555826609.6485176
[2025-11-26 16:01:20] 2025-11-26 21:00:46,591 | INFO     | sum of deviations: 7363550398.227722
[2025-11-26 16:01:20] 2025-11-26 21:00:46,591 | INFO     | mean x: 1764183994.6188118
[2025-11-26 16:01:20] 2025-11-26 21:00:46,591 | INFO     | mean y: 2620076.782178218
[2025-11-26 16:01:20] 2025-11-26 21:00:46,592 | INFO     | intersect: -5080141682.987131
[2025-11-26 16:01:20] 2025-11-26 21:00:46,592 | INFO     | chi2: 0.0013259014660887934
[2025-11-26 16:01:20] 2025-11-26 21:00:46,592 | INFO     | current memory leak: 2.88 B/s (using 202 data points, chi2=0.00)
[2025-11-26 16:01:20] 2025-11-26 21:00:46,592 | INFO     | could have reported an average CPU frequency of 3280 MHz (11 samples)
[2025-11-26 16:01:20] 2025-11-26 21:00:46,592 | INFO     | ..............................
[2025-11-26 16:01:20] 2025-11-26 21:00:46,592 | INFO     | . Timing measurements:
[2025-11-26 16:01:20] 2025-11-26 21:00:46,593 | INFO     | . get job = 0 s
[2025-11-26 16:01:20] 2025-11-26 21:00:46,593 | INFO     | . initial setup = 2 s
[2025-11-26 16:01:20] 2025-11-26 21:00:46,593 | INFO     | . payload setup = 7 s
[2025-11-26 16:01:20] 2025-11-26 21:00:46,593 | INFO     | . stage-in = 0 s
[2025-11-26 16:01:20] 2025-11-26 21:00:46,593 | INFO     | . payload execution = 14184 s
[2025-11-26 16:01:20] 2025-11-26 21:00:46,593 | INFO     | . stage-out = 3 s
[2025-11-26 16:01:20] 2025-11-26 21:00:46,593 | INFO     | . log creation = 0 s
[2025-11-26 16:01:20] 2025-11-26 21:00:46,593 | INFO     | ..............................
[2025-11-26 16:01:20] 2025-11-26 21:00:46,663 | INFO     | 
[2025-11-26 16:01:20] 2025-11-26 21:00:46,666 | INFO     | job summary report
[2025-11-26 16:01:20] 2025-11-26 21:00:46,666 | INFO     | --------------------------------------------------
[2025-11-26 16:01:20] 2025-11-26 21:00:46,666 | INFO     | PanDA job id: 6894052119
[2025-11-26 16:01:20] 2025-11-26 21:00:46,666 | INFO     | task id: 47523659
[2025-11-26 16:01:20] 2025-11-26 21:00:46,666 | INFO     | errors: (none)
[2025-11-26 16:01:20] 2025-11-26 21:00:46,666 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:01:20] 2025-11-26 21:00:46,666 | INFO     | pilot state: finished 
[2025-11-26 16:01:20] 2025-11-26 21:00:46,666 | INFO     | transexitcode: 0
[2025-11-26 16:01:20] 2025-11-26 21:00:46,666 | INFO     | exeerrorcode: 0
[2025-11-26 16:01:20] 2025-11-26 21:00:46,666 | INFO     | exeerrordiag: 
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | exitcode: 0
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | exitmsg: OK
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | cpuconsumptiontime: 76195 s
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | nevents: 400
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | neventsw: 0
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | pid: 74015
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | pgrp: 74015
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | corecount: 8
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | event service: False
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | sizes: {0: 2283950, 6: 2284212, 11: 2284240, 14196: 2315099, 14200: 2324097, 14203: 2324153, 14217: 2324475}
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | --------------------------------------------------
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | 
[2025-11-26 16:01:20] 2025-11-26 21:00:46,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 16:01:20] 2025-11-26 21:00:46,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | job 6894052119 has completed (purged errors)
[2025-11-26 16:01:20] 2025-11-26 21:00:46,721 | INFO     | overall cleanup function is called
[2025-11-26 16:01:20] 2025-11-26 21:00:47,731 | INFO     | --- collectZombieJob: --- 10, [74015]
[2025-11-26 16:01:20] 2025-11-26 21:00:47,731 | INFO     | zombie collector waiting for pid 74015
[2025-11-26 16:01:20] 2025-11-26 21:00:47,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:01:20] 2025-11-26 21:00:47,731 | INFO     | collected zombie processes
[2025-11-26 16:01:20] 2025-11-26 21:00:47,731 | INFO     | will attempt to kill all subprocesses of pid=74015
[2025-11-26 16:01:20] 2025-11-26 21:00:48,943 | INFO     | process IDs to be killed: [74015] (in reverse order)
[2025-11-26 16:01:20] 2025-11-26 21:00:49,157 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:01:20] 2025-11-26 21:00:49,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:01:20] 2025-11-26 21:00:49,201 | INFO     | did not find any defunct processes belonging to 74015
[2025-11-26 16:01:20] 2025-11-26 21:00:49,248 | INFO     | did not find any defunct processes belonging to 74015
[2025-11-26 16:01:20] 2025-11-26 21:00:49,264 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:01:20] 2025-11-26 21:00:49,264 | INFO     | ready for new job
[2025-11-26 16:01:20] 2025-11-26 21:00:49,264 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:01:20] 2025-11-26 21:00:49,270 | INFO     | ***************************************
[2025-11-26 16:01:20] 2025-11-26 21:00:49,270 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:01:20] 2025-11-26 21:00:49,270 | INFO     | ***************************************
[2025-11-26 16:01:20] 2025-11-26 21:00:49,270 | INFO     | 
[2025-11-26 16:01:20] 2025-11-26 21:00:49,282 | INFO     | architecture information:
[2025-11-26 16:01:20] 2025-11-26 21:00:49,290 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:01:20] 2025-11-26 21:00:49,400 | INFO     | cat /etc/os-release:
[2025-11-26 16:01:20] NAME="CentOS Linux"
[2025-11-26 16:01:20] VERSION="7 (Core)"
[2025-11-26 16:01:20] ID="centos"
[2025-11-26 16:01:20] ID_LIKE="rhel fedora"
[2025-11-26 16:01:20] VERSION_ID="7"
[2025-11-26 16:01:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:01:20] ANSI_COLOR="0;31"
[2025-11-26 16:01:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:01:20] HOME_URL="https://www.centos.org/"
[2025-11-26 16:01:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:01:20] 
[2025-11-26 16:01:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:01:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:01:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:01:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:01:20] 
[2025-11-26 16:01:20] 2025-11-26 21:00:49,400 | INFO     | ***************************************
[2025-11-26 16:01:20] 2025-11-26 21:00:49,904 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 16:01:20] 2025-11-26 21:00:49,992 | INFO     | sufficient remaining disk space (78606499840 B)
[2025-11-26 16:01:20] 2025-11-26 21:00:49,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:01:20] 2025-11-26 21:00:49,992 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:01:20] 2025-11-26 21:00:49,992 | INFO     | update_server=False
[2025-11-26 16:01:20] 2025-11-26 21:00:49,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:01:20] 2025-11-26 21:00:49,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:01:20] 2025-11-26 21:00:49,994 | INFO     | aborting loop
[2025-11-26 16:01:20] 2025-11-26 21:00:50,223 | INFO     | all data control threads have been joined
[2025-11-26 16:01:20] 2025-11-26 21:00:50,699 | INFO     | all payload control threads have been joined
[2025-11-26 16:01:20] 2025-11-26 21:00:50,998 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:51,000 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:51,045 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:51,045 | INFO     | [job] validate thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:51,089 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:51,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:01:20] 2025-11-26 21:00:51,229 | INFO     | [data] control thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:51,298 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:51,360 | INFO     | all job control threads have been joined
[2025-11-26 16:01:20] 2025-11-26 21:00:51,688 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:01:20] 2025-11-26 21:00:51,705 | INFO     | [payload] control thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:51,711 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:52,069 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:52,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:01:20] 2025-11-26 21:00:52,243 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:52,277 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:52,373 | INFO     | [job] control thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:52,694 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:53,118 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:56,197 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:01:20] 2025-11-26 21:00:57,920 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:01:20] 2025-11-26 21:00:59,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193159477056)>', '<ExcThread(monitor, started 140192203654912)>']
[2025-11-26 16:01:20] 2025-11-26 21:01:04,809 | INFO     | all workflow threads have been joined
[2025-11-26 16:01:20] 2025-11-26 21:01:04,809 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:01:20] 2025-11-26 21:01:04,810 | INFO     | traces error code: 0
[2025-11-26 16:01:20] 2025-11-26 21:01:04,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:01:20] 2025-11-26 21:01:20,119 | INFO     | PID=54908 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 16:01:20] 2025-11-26 21:01:20,119 | INFO     | .. there are 46 such processes running
[2025-11-26 16:01:20] 2025-11-26 21:01:20,120 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:01:20] 2025-11-26 21:01:20,120 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:01:20] 2025-11-26 21:01:20,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:01:20] 2025-11-26 21:01:20,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:01:20] 2025-11-26 21:01:20,120 | INFO     | [monitor] control thread has ended
[2025-11-26 16:01:20] 2025-11-26 21:01:20,380 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:01:20] 2025-11-26 21:01:20,384 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:01:20] 2025-11-26 21:01:20,387 [wrapper] pilotpid: 54908
[2025-11-26 16:01:20] 2025-11-26 21:01:20,391 [wrapper] Pilot exit status: 0
[2025-11-26 16:01:20] 2025-11-26 21:01:20,427 [wrapper] pandaids: 6894052119
[2025-11-26 16:01:20] 2025-11-26 21:01:20,574 [wrapper] cleanup supervisor_pilot 1327913 54910
[2025-11-26 16:01:20] 2025-11-26 21:01:20,580 [wrapper] Test setup, not cleaning
[2025-11-26 16:01:20] 2025-11-26 21:01:20,614 [wrapper] apfmon messages muted
[2025-11-26 16:01:20] 2025-11-26 21:01:20,676 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:01:20] 2025-11-26 21:01:20,703 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:01:20]  *** Error codes and diagnostics ***
[2025-11-26 16:01:20]     "exeErrorCode": 0,
[2025-11-26 16:01:20]     "exeErrorDiag": "",
[2025-11-26 16:01:20]     "pilotErrorCode": 0,
[2025-11-26 16:01:20]     "pilotErrorDiag": "",
[2025-11-26 16:01:20]  *** Listing of results directory ***
[2025-11-26 16:01:20] total 610724
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 11:22 pilot3.tar.gz
[2025-11-26 16:01:20] -rwx------. 1 boincer umatlas     36292 Nov 22 11:35 runpilot2-wrapper.sh
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 11:35 queuedata.json
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas       100 Nov 26 12:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:01:20] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 12:03 run_atlas
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas       105 Nov 26 12:03 job.xml
[2025-11-26 16:01:20] -rw-r--r--. 2 boincer umatlas 299009041 Nov 26 12:03 EVNT.47523657._000004.pool.root.1
[2025-11-26 16:01:20] -rw-r--r--. 2 boincer umatlas    589947 Nov 26 12:03 input.tar.gz
[2025-11-26 16:01:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 12:03 start_atlas.sh
[2025-11-26 16:01:20] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 12:03 shared
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas         0 Nov 26 12:03 boinc_lockfile
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas      2613 Nov 26 12:03 pandaJob.out
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas        57 Nov 26 12:03 setup.sh.local
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas    991545 Nov 26 12:03 agis_schedconf.cvmfs.json
[2025-11-26 16:01:20] drwx------. 5 boincer umatlas      4096 Nov 26 12:03 pilot3
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas 317764062 Nov 26 15:59 HITS.47523659._000093.pool.root.1
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas       529 Nov 26 15:59 boinc_task_state.xml
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas      1049 Nov 26 16:00 memory_monitor_summary.json
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas   1516240 Nov 26 16:00 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas    467898 Nov 26 16:00 log.47523659._000093.job.log.tgz.1
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas      6901 Nov 26 16:00 init_data.xml
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas      7768 Nov 26 16:00 heartbeat.json
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 16:01 boinc_mmap_file
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas        27 Nov 26 16:01 wrapper_checkpoint.txt
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas       821 Nov 26 16:01 pilotlog.txt
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas        95 Nov 26 16:01 pilot_heartbeat.json
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas   1873911 Nov 26 16:01 log.47523659._000093.job.log.1
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas       357 Nov 26 16:01 output.list
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas       620 Nov 26 16:01 runtime_log
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas   2365440 Nov 26 16:01 result.tar.gz
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas      9343 Nov 26 16:01 runtime_log.err
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas       657 Nov 26 16:01 nLLMDmxk5g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtGKKDmjNlBWn.diag
[2025-11-26 16:01:20] -rw-r--r--. 1 boincer umatlas     21276 Nov 26 16:01 stderr.txt
[2025-11-26 16:01:20] HITS file was successfully produced:
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas 317764062 Nov 26 15:59 shared/HITS.pool.root.1
[2025-11-26 16:01:20]  *** Contents of shared directory: ***
[2025-11-26 16:01:20] total 605240
[2025-11-26 16:01:20] -rw-r--r--. 2 boincer umatlas 299009041 Nov 26 12:03 ATLAS.root_0
[2025-11-26 16:01:20] -rw-r--r--. 2 boincer umatlas    589947 Nov 26 12:03 input.tar.gz
[2025-11-26 16:01:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 12:03 start_atlas.sh
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas 317764062 Nov 26 15:59 HITS.pool.root.1
[2025-11-26 16:01:20] -rw-------. 1 boincer umatlas   2365440 Nov 26 16:01 result.tar.gz
16:01:21 (48730): run_atlas exited; CPU time 76630.916268
16:01:21 (48730): called boinc_finish(0)

</stderr_txt>
]]>

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