Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:31:55 (3754082): wrapper (7.7.26015): starting
08:31:55 (3754082): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 08:31:55] Arguments: --nthreads 8
[2025-11-26 08:31:55] Threads: 8
[2025-11-26 08:31:55] Checking for CVMFS
[2025-11-26 08:31:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:31:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:31:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:31:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:31:57] 2.13.3.0 14328 30091 249904 153323 3 777 35875182 40960000 47152 16776704 0 369133779 99.722 270490768 51852 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 08:31:57] CVMFS is ok
[2025-11-26 08:31:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:31:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:31:57] Further information can be found at the LHC@home message board.
[2025-11-26 08:31:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:31:57] Checking for apptainer binary...
[2025-11-26 08:31:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:31:57] Running /usr/bin/apptainer --version
[2025-11-26 08:31:57] apptainer version 1.4.4-1.el9
[2025-11-26 08:31:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:31:58] c8-16-2.aglt2.org
[2025-11-26 08:31:58] apptainer works
[2025-11-26 08:31:58] Set ATHENA_PROC_NUMBER=8
[2025-11-26 08:31:58] Set ATHENA_CORE_NUMBER=8
[2025-11-26 08:31:58] Starting ATLAS job with PandaID=6895347396
[2025-11-26 08:31:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:16:54]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:16:54] 2025-11-26 22:16:03,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:16:54] 2025-11-26 22:16:04,732 | INFO     | time since job start (31407s) is within the limit (172800.0s)
[2025-11-26 17:16:54] 2025-11-26 22:16:05,540 | INFO     | monitor loop #1808: job 0:6895347396 is in state 'finished'
[2025-11-26 17:16:54] 2025-11-26 22:16:05,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:16:54] 2025-11-26 22:16:06,738 | INFO     | time since job start (31409s) is within the limit (172800.0s)
[2025-11-26 17:16:54] 2025-11-26 22:16:08,074 | INFO     | monitor loop #1809: job 0:6895347396 is in state 'finished'
[2025-11-26 17:16:54] 2025-11-26 22:16:08,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:16:54] 2025-11-26 22:16:08,747 | INFO     | time since job start (31411s) is within the limit (172800.0s)
[2025-11-26 17:16:54] 2025-11-26 22:16:10,578 | INFO     | monitor loop #1810: job 0:6895347396 is in state 'finished'
[2025-11-26 17:16:54] 2025-11-26 22:16:10,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:16:54] 2025-11-26 22:16:10,769 | INFO     | time since job start (31413s) is within the limit (172800.0s)
[2025-11-26 17:16:54] 2025-11-26 22:16:12,775 | INFO     | time since job start (31415s) is within the limit (172800.0s)
[2025-11-26 17:16:54] 2025-11-26 22:16:13,085 | INFO     | monitor loop #1811: job 0:6895347396 is in state 'finished'
[2025-11-26 17:16:54] 2025-11-26 22:16:13,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:16:54] 2025-11-26 22:16:14,796 | INFO     | time since job start (31417s) is within the limit (172800.0s)
[2025-11-26 17:16:54] 2025-11-26 22:16:15,601 | INFO     | monitor loop #1812: job 0:6895347396 is in state 'finished'
[2025-11-26 17:16:54] 2025-11-26 22:16:15,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:16:54] 2025-11-26 22:16:15,702 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 17:16:54] 2025-11-26 22:16:15,729 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3793.7796015625013
[2025-11-26 17:16:54] 2025-11-26 22:16:15,795 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895347396/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:16:54] 2025-11-26 22:16:15,795 | INFO     | extracted standard info from prmon json
[2025-11-26 17:16:54] 2025-11-26 22:16:15,795 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:16:54] 2025-11-26 22:16:15,795 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:16:54] 2025-11-26 22:16:15,809 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:16:54] 2025-11-26 22:16:15,810 | INFO     | sum of square deviations: 41860680319.57894
[2025-11-26 17:16:54] 2025-11-26 22:16:15,813 | INFO     | sum of deviations: -1233607701355.1753
[2025-11-26 17:16:54] 2025-11-26 22:16:15,813 | INFO     | mean x: 1764179647.2807016
[2025-11-26 17:16:54] 2025-11-26 22:16:15,813 | INFO     | mean y: 2859938.1539961016
[2025-11-26 17:16:54] 2025-11-26 22:16:15,813 | INFO     | intersect: 51992115316.8258
[2025-11-26 17:16:54] 2025-11-26 22:16:15,820 | INFO     | chi2: 73.96615026285481
[2025-11-26 17:16:54] 2025-11-26 22:16:15,825 | INFO     | sum of square deviations: 40648709131.2972
[2025-11-26 17:16:54] 2025-11-26 22:16:15,833 | INFO     | sum of deviations: -1079273271797.7426
[2025-11-26 17:16:54] 2025-11-26 22:16:15,833 | INFO     | mean x: 1764179494.793307
[2025-11-26 17:16:54] 2025-11-26 22:16:15,833 | INFO     | mean y: 2879356.840551181
[2025-11-26 17:16:54] 2025-11-26 22:16:15,833 | INFO     | intersect: 46844016900.32197
[2025-11-26 17:16:54] 2025-11-26 22:16:15,833 | INFO     | chi2: 69.90778310767257
[2025-11-26 17:16:54] 2025-11-26 22:16:15,833 | INFO     | current chi2=69.90778310767257 (change=5.486789755529994 %)
[2025-11-26 17:16:54] 2025-11-26 22:16:15,833 | INFO     | right removable region: 507
[2025-11-26 17:16:54] 2025-11-26 22:16:15,833 | INFO     | sum of square deviations: 40648339411.881996
[2025-11-26 17:16:54] 2025-11-26 22:16:15,841 | INFO     | sum of deviations: -1371082407662.3274
[2025-11-26 17:16:54] 2025-11-26 22:16:15,841 | INFO     | mean x: 1764179799.7913387
[2025-11-26 17:16:54] 2025-11-26 22:16:15,841 | INFO     | mean y: 2877188.7893700786
[2025-11-26 17:16:54] 2025-11-26 22:16:15,841 | INFO     | intersect: 59509265947.68899
[2025-11-26 17:16:54] 2025-11-26 22:16:15,841 | INFO     | chi2: 72.04509981125523
[2025-11-26 17:16:54] 2025-11-26 22:16:15,841 | INFO     | current chi2=72.04509981125523 (change=2.5972021590588574 %)
[2025-11-26 17:16:54] 2025-11-26 22:16:15,841 | INFO     | left removable region: 10
[2025-11-26 17:16:54] 2025-11-26 22:16:15,842 | INFO     | sum of square deviations: 38064844009.11067
[2025-11-26 17:16:54] 2025-11-26 22:16:15,846 | INFO     | sum of deviations: -1208390361534.4146
[2025-11-26 17:16:54] 2025-11-26 22:16:15,846 | INFO     | mean x: 1764179769.2937627
[2025-11-26 17:16:54] 2025-11-26 22:16:15,846 | INFO     | mean y: 2903918.3179074447
[2025-11-26 17:16:54] 2025-11-26 22:16:15,846 | INFO     | intersect: 56007805152.5998
[2025-11-26 17:16:54] 2025-11-26 22:16:15,847 | INFO     | chi2: 67.21792637899848
[2025-11-26 17:16:54] 2025-11-26 22:16:15,847 | INFO     | current memory leak: -31.75 B/s (using 497 data points, chi2=67.22)
[2025-11-26 17:16:54] 2025-11-26 22:16:15,847 | INFO     | could have reported an average CPU frequency of 3791 MHz (20 samples)
[2025-11-26 17:16:54] 2025-11-26 22:16:15,847 | INFO     | ..............................
[2025-11-26 17:16:54] 2025-11-26 22:16:15,847 | INFO     | . Timing measurements:
[2025-11-26 17:16:54] 2025-11-26 22:16:15,847 | INFO     | . get job = 0 s
[2025-11-26 17:16:54] 2025-11-26 22:16:15,847 | INFO     | . initial setup = 3 s
[2025-11-26 17:16:54] 2025-11-26 22:16:15,848 | INFO     | . payload setup = 23 s
[2025-11-26 17:16:54] 2025-11-26 22:16:15,848 | INFO     | . stage-in = 0 s
[2025-11-26 17:16:54] 2025-11-26 22:16:15,848 | INFO     | . payload execution = 31286 s
[2025-11-26 17:16:54] 2025-11-26 22:16:15,848 | INFO     | . stage-out = 10 s
[2025-11-26 17:16:54] 2025-11-26 22:16:15,848 | INFO     | . log creation = 1 s
[2025-11-26 17:16:54] 2025-11-26 22:16:15,848 | INFO     | ..............................
[2025-11-26 17:16:54] 2025-11-26 22:16:15,995 | INFO     | 
[2025-11-26 17:16:54] 2025-11-26 22:16:15,999 | INFO     | job summary report
[2025-11-26 17:16:54] 2025-11-26 22:16:15,999 | INFO     | --------------------------------------------------
[2025-11-26 17:16:54] 2025-11-26 22:16:15,999 | INFO     | PanDA job id: 6895347396
[2025-11-26 17:16:54] 2025-11-26 22:16:15,999 | INFO     | task id: 47556137
[2025-11-26 17:16:54] 2025-11-26 22:16:15,999 | INFO     | errors: (none)
[2025-11-26 17:16:54] 2025-11-26 22:16:15,999 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:16:54] 2025-11-26 22:16:15,999 | INFO     | pilot state: finished 
[2025-11-26 17:16:54] 2025-11-26 22:16:15,999 | INFO     | transexitcode: 0
[2025-11-26 17:16:54] 2025-11-26 22:16:15,999 | INFO     | exeerrorcode: 0
[2025-11-26 17:16:54] 2025-11-26 22:16:16,000 | INFO     | exeerrordiag: 
[2025-11-26 17:16:54] 2025-11-26 22:16:16,000 | INFO     | exitcode: 0
[2025-11-26 17:16:54] 2025-11-26 22:16:16,000 | INFO     | exitmsg: OK
[2025-11-26 17:16:54] 2025-11-26 22:16:16,002 | INFO     | cpuconsumptiontime: 137347 s
[2025-11-26 17:16:54] 2025-11-26 22:16:16,002 | INFO     | nevents: 1000
[2025-11-26 17:16:54] 2025-11-26 22:16:16,002 | INFO     | neventsw: 0
[2025-11-26 17:16:54] 2025-11-26 22:16:16,002 | INFO     | pid: 3772114
[2025-11-26 17:16:54] 2025-11-26 22:16:16,002 | INFO     | pgrp: 3772114
[2025-11-26 17:16:54] 2025-11-26 22:16:16,002 | INFO     | corecount: 8
[2025-11-26 17:16:54] 2025-11-26 22:16:16,002 | INFO     | event service: False
[2025-11-26 17:16:54] 2025-11-26 22:16:16,002 | INFO     | sizes: {0: 2284264, 11: 2284264, 18: 2284554, 22: 2284582, 31313: 2323820, 31323: 2332998, 31383: 2333188}
[2025-11-26 17:16:54] 2025-11-26 22:16:16,002 | INFO     | --------------------------------------------------
[2025-11-26 17:16:54] 2025-11-26 22:16:16,002 | INFO     | 
[2025-11-26 17:16:54] 2025-11-26 22:16:16,002 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 17:16:54] 2025-11-26 22:16:16,229 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,229 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | job 6895347396 has completed (purged errors)
[2025-11-26 17:16:54] 2025-11-26 22:16:16,230 | INFO     | overall cleanup function is called
[2025-11-26 17:16:54] 2025-11-26 22:16:17,292 | INFO     | --- collectZombieJob: --- 10, [3772114]
[2025-11-26 17:16:54] 2025-11-26 22:16:17,293 | INFO     | zombie collector waiting for pid 3772114
[2025-11-26 17:16:54] 2025-11-26 22:16:17,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:16:54] 2025-11-26 22:16:17,293 | INFO     | collected zombie processes
[2025-11-26 17:16:54] 2025-11-26 22:16:17,293 | INFO     | will attempt to kill all subprocesses of pid=3772114
[2025-11-26 17:16:54] 2025-11-26 22:16:20,662 | INFO     | process IDs to be killed: [3772114] (in reverse order)
[2025-11-26 17:16:54] 2025-11-26 22:16:21,552 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:16:54] 2025-11-26 22:16:21,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:16:54] 2025-11-26 22:16:21,584 | INFO     | did not find any defunct processes belonging to 3772114
[2025-11-26 17:16:54] 2025-11-26 22:16:21,641 | INFO     | did not find any defunct processes belonging to 3772114
[2025-11-26 17:16:54] 2025-11-26 22:16:21,686 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:16:54] 2025-11-26 22:16:21,687 | INFO     | ready for new job
[2025-11-26 17:16:54] 2025-11-26 22:16:21,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:16:54] 2025-11-26 22:16:21,688 | INFO     | ***************************************
[2025-11-26 17:16:54] 2025-11-26 22:16:21,689 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:16:54] 2025-11-26 22:16:21,689 | INFO     | ***************************************
[2025-11-26 17:16:54] 2025-11-26 22:16:21,689 | INFO     | 
[2025-11-26 17:16:54] 2025-11-26 22:16:21,724 | INFO     | architecture information:
[2025-11-26 17:16:54] 2025-11-26 22:16:21,740 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:16:54] 2025-11-26 22:16:21,895 | INFO     | cat /etc/os-release:
[2025-11-26 17:16:54] NAME="CentOS Linux"
[2025-11-26 17:16:54] VERSION="7 (Core)"
[2025-11-26 17:16:54] ID="centos"
[2025-11-26 17:16:54] ID_LIKE="rhel fedora"
[2025-11-26 17:16:54] VERSION_ID="7"
[2025-11-26 17:16:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:16:54] ANSI_COLOR="0;31"
[2025-11-26 17:16:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:16:54] HOME_URL="https://www.centos.org/"
[2025-11-26 17:16:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:16:54] 
[2025-11-26 17:16:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:16:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:16:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:16:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:16:54] 
[2025-11-26 17:16:54] 2025-11-26 22:16:21,896 | INFO     | ***************************************
[2025-11-26 17:16:54] 2025-11-26 22:16:22,399 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 17:16:54] 2025-11-26 22:16:22,454 | INFO     | sufficient remaining disk space (157749870592 B)
[2025-11-26 17:16:54] 2025-11-26 22:16:22,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:16:54] 2025-11-26 22:16:22,454 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:16:54] 2025-11-26 22:16:22,454 | INFO     | update_server=False
[2025-11-26 17:16:54] 2025-11-26 22:16:22,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:16:54] 2025-11-26 22:16:22,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:16:54] 2025-11-26 22:16:22,455 | INFO     | aborting loop
[2025-11-26 17:16:54] 2025-11-26 22:16:22,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:16:54] 2025-11-26 22:16:22,989 | INFO     | all job control threads have been joined
[2025-11-26 17:16:54] 2025-11-26 22:16:23,376 | INFO     | all data control threads have been joined
[2025-11-26 17:16:54] 2025-11-26 22:16:23,460 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:23,483 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:23,509 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:23,930 | INFO     | all payload control threads have been joined
[2025-11-26 17:16:54] 2025-11-26 22:16:24,007 | INFO     | [job] control thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:24,255 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:24,382 | INFO     | [data] control thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:24,462 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:24,651 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:24,764 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:24,764 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:24,765 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:24,777 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:24,864 | INFO     | [job] validate thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:24,951 | INFO     | [payload] control thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:25,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:16:54] 2025-11-26 22:16:25,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:16:54] 2025-11-26 22:16:26,159 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:29,615 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:16:54] 2025-11-26 22:16:33,047 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:16:54] 2025-11-26 22:16:34,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140479010133824)>', '<ExcThread(monitor, started 140478381029120)>']
[2025-11-26 17:16:54] 2025-11-26 22:16:39,090 | INFO     | all workflow threads have been joined
[2025-11-26 17:16:54] 2025-11-26 22:16:39,090 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:16:54] 2025-11-26 22:16:39,090 | INFO     | traces error code: 0
[2025-11-26 17:16:54] 2025-11-26 22:16:39,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:16:54] 2025-11-26 22:16:50,177 | INFO     | PID=3758448 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:16:54] 2025-11-26 22:16:50,177 | INFO     | .. there are 66 such processes running
[2025-11-26 17:16:54] 2025-11-26 22:16:50,178 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:16:54] 2025-11-26 22:16:50,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:16:54] 2025-11-26 22:16:50,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:16:54] 2025-11-26 22:16:50,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:16:54] 2025-11-26 22:16:50,178 | INFO     | [monitor] control thread has ended
[2025-11-26 17:16:54] 2025-11-26 22:16:51,851 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:16:54] 2025-11-26 22:16:51,902 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:16:54] 2025-11-26 22:16:51,937 [wrapper] pilotpid: 3758448
[2025-11-26 17:16:54] 2025-11-26 22:16:51,979 [wrapper] Pilot exit status: 0
[2025-11-26 17:16:54] 2025-11-26 22:16:52,174 [wrapper] pandaids: 6895347396
[2025-11-26 17:16:54] 2025-11-26 22:16:52,816 [wrapper] cleanup supervisor_pilot 3810777 3758449
[2025-11-26 17:16:54] 2025-11-26 22:16:52,859 [wrapper] Test setup, not cleaning
[2025-11-26 17:16:54] 2025-11-26 22:16:52,910 [wrapper] apfmon messages muted
[2025-11-26 17:16:54] 2025-11-26 22:16:52,922 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:16:54] 2025-11-26 22:16:52,948 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:16:54]  *** Error codes and diagnostics ***
[2025-11-26 17:16:54]     "exeErrorCode": 0,
[2025-11-26 17:16:54]     "exeErrorDiag": "",
[2025-11-26 17:16:54]     "pilotErrorCode": 0,
[2025-11-26 17:16:54]     "pilotErrorDiag": "",
[2025-11-26 17:16:54]  *** Listing of results directory ***
[2025-11-26 17:16:54] total 1297724
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 14:13 pilot3.tar.gz
[2025-11-26 17:16:54] -rwx------. 1 boincer umatlas     36292 Nov 22 14:23 runpilot2-wrapper.sh
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 14:23 queuedata.json
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas       100 Nov 26 08:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:16:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 08:31 run_atlas
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas       105 Nov 26 08:31 job.xml
[2025-11-26 17:16:54] -rw-r--r--. 2 boincer umatlas 408700905 Nov 26 08:31 EVNT.47483658._000467.pool.root.1
[2025-11-26 17:16:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:31 start_atlas.sh
[2025-11-26 17:16:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 08:31 shared
[2025-11-26 17:16:54] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 08:31 input.tar.gz
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas         0 Nov 26 08:31 boinc_lockfile
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 08:31 pandaJob.out
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas        57 Nov 26 08:31 setup.sh.local
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas    991830 Nov 26 08:32 agis_schedconf.cvmfs.json
[2025-11-26 17:16:54] drwx------. 5 boincer umatlas      4096 Nov 26 08:32 pilot3
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas       533 Nov 26 16:04 boinc_task_state.xml
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas      7174 Nov 26 17:12 init_data.xml
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas 904999547 Nov 26 17:14 HITS.47556137._004628.pool.root.1
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas      1077 Nov 26 17:15 memory_monitor_summary.json
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas   1516240 Nov 26 17:15 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas   1762319 Nov 26 17:15 log.47556137._004628.job.log.tgz.1
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas      8646 Nov 26 17:16 heartbeat.json
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:16 wrapper_checkpoint.txt
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas       823 Nov 26 17:16 pilotlog.txt
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas        95 Nov 26 17:16 pilot_heartbeat.json
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas   3871248 Nov 26 17:16 log.47556137._004628.job.log.1
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas       353 Nov 26 17:16 output.list
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:16 runtime_log
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas   5652480 Nov 26 17:16 result.tar.gz
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 17:16 runtime_log.err
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas       665 Nov 26 17:16 rQgKDmaN8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcEIKDmqI0L8m.diag
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:16 boinc_mmap_file
[2025-11-26 17:16:54] -rw-r--r--. 1 boincer umatlas      2143 Nov 26 17:16 stderr.txt
[2025-11-26 17:16:54] HITS file was successfully produced:
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas 904999547 Nov 26 17:14 shared/HITS.pool.root.1
[2025-11-26 17:16:54]  *** Contents of shared directory: ***
[2025-11-26 17:16:54] total 1289040
[2025-11-26 17:16:54] -rw-r--r--. 2 boincer umatlas 408700905 Nov 26 08:31 ATLAS.root_0
[2025-11-26 17:16:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:31 start_atlas.sh
[2025-11-26 17:16:54] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 08:31 input.tar.gz
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas 904999547 Nov 26 17:14 HITS.pool.root.1
[2025-11-26 17:16:54] -rw-------. 1 boincer umatlas   5652480 Nov 26 17:16 result.tar.gz
17:16:55 (3754082): run_atlas exited; CPU time 137835.402284
17:16:55 (3754082): called boinc_finish(0)

</stderr_txt>
]]>

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