Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:00:09 (2923883): wrapper (7.7.26015): starting
09:00:09 (2923883): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 09:00:09] Arguments: --nthreads 9
[2025-11-26 09:00:09] Threads: 9
[2025-11-26 09:00:09] Checking for CVMFS
[2025-11-26 09:00:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:00:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:00:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:00:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:00:09] 2.13.3.0 3025293 9044 103244 153323 3 90 17996452 37030913 1932 16776704 0 9955056 99.940 785368 17878 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 09:00:09] CVMFS is ok
[2025-11-26 09:00:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:00:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:00:09] Further information can be found at the LHC@home message board.
[2025-11-26 09:00:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:00:09] Checking for apptainer binary...
[2025-11-26 09:00:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:00:09] Running /usr/bin/apptainer --version
[2025-11-26 09:00:09] apptainer version 1.4.4-1.el9
[2025-11-26 09:00:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:00:09] c-205-37.aglt2.org
[2025-11-26 09:00:09] apptainer works
[2025-11-26 09:00:09] Set ATHENA_PROC_NUMBER=9
[2025-11-26 09:00:09] Set ATHENA_CORE_NUMBER=9
[2025-11-26 09:00:09] Starting ATLAS job with PandaID=6895336436
[2025-11-26 09:00:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:46:16]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:46:16] 2025-11-26 22:45:33,479 | INFO     | monitor loop #2340: job 0:6895336436 is in state 'finished'
[2025-11-26 17:46:16] 2025-11-26 22:45:33,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:46:16] 2025-11-26 22:45:34,205 | INFO     | time since job start (31515s) is within the limit (172800.0s)
[2025-11-26 17:46:16] 2025-11-26 22:45:35,252 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 17:46:16] 2025-11-26 22:45:35,258 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2675.11059375
[2025-11-26 17:46:16] 2025-11-26 22:45:35,265 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895336436/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:46:16] 2025-11-26 22:45:35,265 | INFO     | extracted standard info from prmon json
[2025-11-26 17:46:16] 2025-11-26 22:45:35,265 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:46:16] 2025-11-26 22:45:35,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:46:16] 2025-11-26 22:45:35,276 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:46:16] 2025-11-26 22:45:35,277 | INFO     | sum of square deviations: 42849313929.87611
[2025-11-26 17:46:16] 2025-11-26 22:45:35,284 | INFO     | sum of deviations: 636408172981.0636
[2025-11-26 17:46:16] 2025-11-26 22:45:35,284 | INFO     | mean x: 1764181381.197292
[2025-11-26 17:46:16] 2025-11-26 22:45:35,284 | INFO     | mean y: 3077910.6170212766
[2025-11-26 17:46:16] 2025-11-26 22:45:35,285 | INFO     | intersect: -26198962370.64319
[2025-11-26 17:46:16] 2025-11-26 22:45:35,285 | INFO     | chi2: 5.519828524192236
[2025-11-26 17:46:16] 2025-11-26 22:45:35,286 | INFO     | sum of square deviations: 41618103349.67969
[2025-11-26 17:46:16] 2025-11-26 22:45:35,293 | INFO     | sum of deviations: 820074917778.21
[2025-11-26 17:46:16] 2025-11-26 22:45:35,294 | INFO     | mean x: 1764181228.6992188
[2025-11-26 17:46:16] 2025-11-26 22:45:35,294 | INFO     | mean y: 3100640.248046875
[2025-11-26 17:46:16] 2025-11-26 22:45:35,294 | INFO     | intersect: -34759674681.7203
[2025-11-26 17:46:16] 2025-11-26 22:45:35,295 | INFO     | chi2: 2.298378179897079
[2025-11-26 17:46:16] 2025-11-26 22:45:35,295 | INFO     | current chi2=2.298378179897079 (change=58.36142065240295 %)
[2025-11-26 17:46:16] 2025-11-26 22:45:35,296 | INFO     | sum of square deviations: 40410707169.47893
[2025-11-26 17:46:16] 2025-11-26 22:45:35,303 | INFO     | sum of deviations: 815876318170.5315
[2025-11-26 17:46:16] 2025-11-26 22:45:35,303 | INFO     | mean x: 1764181076.2011833
[2025-11-26 17:46:16] 2025-11-26 22:45:35,303 | INFO     | mean y: 3100099.779092702
[2025-11-26 17:46:16] 2025-11-26 22:45:35,303 | INFO     | intersect: -35615023458.43101
[2025-11-26 17:46:16] 2025-11-26 22:45:35,304 | INFO     | chi2: 2.253088391821575
[2025-11-26 17:46:16] 2025-11-26 22:45:35,304 | INFO     | current chi2=2.253088391821575 (change=1.9705107049672717 %)
[2025-11-26 17:46:16] 2025-11-26 22:45:35,304 | INFO     | right removable region: 506
[2025-11-26 17:46:16] 2025-11-26 22:45:35,305 | INFO     | sum of square deviations: 41618041129.67969
[2025-11-26 17:46:16] 2025-11-26 22:45:35,312 | INFO     | sum of deviations: 485955225935.23096
[2025-11-26 17:46:16] 2025-11-26 22:45:35,313 | INFO     | mean x: 1764181533.6992188
[2025-11-26 17:46:16] 2025-11-26 22:45:35,313 | INFO     | mean y: 3096503.56640625
[2025-11-26 17:46:16] 2025-11-26 22:45:35,313 | INFO     | intersect: -20596461104.832844
[2025-11-26 17:46:16] 2025-11-26 22:45:35,314 | INFO     | chi2: 3.4075222069727698
[2025-11-26 17:46:16] 2025-11-26 22:45:35,314 | INFO     | current chi2=3.4075222069727698 (change=38.26760755269255 %)
[2025-11-26 17:46:16] 2025-11-26 22:45:35,314 | INFO     | sum of square deviations: 40410614204.87944
[2025-11-26 17:46:16] 2025-11-26 22:45:35,322 | INFO     | sum of deviations: 449555387956.919
[2025-11-26 17:46:16] 2025-11-26 22:45:35,322 | INFO     | mean x: 1764181686.1992111
[2025-11-26 17:46:16] 2025-11-26 22:45:35,322 | INFO     | mean y: 3101096.297830375
[2025-11-26 17:46:16] 2025-11-26 22:45:35,322 | INFO     | intersect: -19622865941.590305
[2025-11-26 17:46:16] 2025-11-26 22:45:35,323 | INFO     | chi2: 3.366293796868626
[2025-11-26 17:46:16] 2025-11-26 22:45:35,323 | INFO     | current chi2=3.366293796868626 (change=1.2099234458334158 %)
[2025-11-26 17:46:16] 2025-11-26 22:45:35,323 | INFO     | left removable region: 20
[2025-11-26 17:46:16] 2025-11-26 22:45:35,324 | INFO     | sum of square deviations: 35594321229.73879
[2025-11-26 17:46:16] 2025-11-26 22:45:35,330 | INFO     | sum of deviations: 577069881768.6317
[2025-11-26 17:46:16] 2025-11-26 22:45:35,330 | INFO     | mean x: 1764181655.701646
[2025-11-26 17:46:16] 2025-11-26 22:45:35,331 | INFO     | mean y: 3130542.3353909464
[2025-11-26 17:46:16] 2025-11-26 22:45:35,331 | INFO     | intersect: -28598513323.921555
[2025-11-26 17:46:16] 2025-11-26 22:45:35,331 | INFO     | chi2: 0.05632192722175004
[2025-11-26 17:46:16] 2025-11-26 22:45:35,332 | INFO     | current memory leak: 16.21 B/s (using 486 data points, chi2=0.06)
[2025-11-26 17:46:16] 2025-11-26 22:45:35,332 | INFO     | could have reported an average CPU frequency of 2615 MHz (21 samples)
[2025-11-26 17:46:16] 2025-11-26 22:45:35,333 | INFO     | ..............................
[2025-11-26 17:46:16] 2025-11-26 22:45:35,333 | INFO     | . Timing measurements:
[2025-11-26 17:46:16] 2025-11-26 22:45:35,333 | INFO     | . get job = 0 s
[2025-11-26 17:46:16] 2025-11-26 22:45:35,333 | INFO     | . initial setup = 2 s
[2025-11-26 17:46:16] 2025-11-26 22:45:35,333 | INFO     | . payload setup = 4 s
[2025-11-26 17:46:16] 2025-11-26 22:45:35,333 | INFO     | . stage-in = 0 s
[2025-11-26 17:46:16] 2025-11-26 22:45:35,333 | INFO     | . payload execution = 31480 s
[2025-11-26 17:46:16] 2025-11-26 22:45:35,334 | INFO     | . stage-out = 3 s
[2025-11-26 17:46:16] 2025-11-26 22:45:35,334 | INFO     | . log creation = 0 s
[2025-11-26 17:46:16] 2025-11-26 22:45:35,334 | INFO     | ..............................
[2025-11-26 17:46:16] 2025-11-26 22:45:35,438 | INFO     | 
[2025-11-26 17:46:16] 2025-11-26 22:45:35,439 | INFO     | job summary report
[2025-11-26 17:46:16] 2025-11-26 22:45:35,439 | INFO     | --------------------------------------------------
[2025-11-26 17:46:16] 2025-11-26 22:45:35,439 | INFO     | PanDA job id: 6895336436
[2025-11-26 17:46:16] 2025-11-26 22:45:35,439 | INFO     | task id: 47556137
[2025-11-26 17:46:16] 2025-11-26 22:45:35,439 | INFO     | errors: (none)
[2025-11-26 17:46:16] 2025-11-26 22:45:35,439 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:46:16] 2025-11-26 22:45:35,439 | INFO     | pilot state: finished 
[2025-11-26 17:46:16] 2025-11-26 22:45:35,439 | INFO     | transexitcode: 0
[2025-11-26 17:46:16] 2025-11-26 22:45:35,440 | INFO     | exeerrorcode: 0
[2025-11-26 17:46:16] 2025-11-26 22:45:35,440 | INFO     | exeerrordiag: 
[2025-11-26 17:46:16] 2025-11-26 22:45:35,440 | INFO     | exitcode: 0
[2025-11-26 17:46:16] 2025-11-26 22:45:35,440 | INFO     | exitmsg: OK
[2025-11-26 17:46:16] 2025-11-26 22:45:35,440 | INFO     | cpuconsumptiontime: 278923 s
[2025-11-26 17:46:16] 2025-11-26 22:45:35,440 | INFO     | nevents: 1000
[2025-11-26 17:46:16] 2025-11-26 22:45:35,440 | INFO     | neventsw: 0
[2025-11-26 17:46:16] 2025-11-26 22:45:35,440 | INFO     | pid: 2934127
[2025-11-26 17:46:16] 2025-11-26 22:45:35,440 | INFO     | pgrp: 2934127
[2025-11-26 17:46:16] 2025-11-26 22:45:35,441 | INFO     | corecount: 9
[2025-11-26 17:46:16] 2025-11-26 22:45:35,441 | INFO     | event service: False
[2025-11-26 17:46:16] 2025-11-26 22:45:35,441 | INFO     | sizes: {0: 2284082, 1: 2284337, 5: 2284599, 12: 2284655, 31489: 2324070, 31494: 2333064, 31497: 2333248, 31501: 2333494}
[2025-11-26 17:46:16] 2025-11-26 22:45:35,441 | INFO     | --------------------------------------------------
[2025-11-26 17:46:16] 2025-11-26 22:45:35,441 | INFO     | 
[2025-11-26 17:46:16] 2025-11-26 22:45:35,441 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 17:46:16] 2025-11-26 22:45:35,457 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,457 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,458 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,458 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,458 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,458 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,458 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,458 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,458 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,460 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:46:16] 2025-11-26 22:45:35,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,460 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:46:16] 2025-11-26 22:45:35,460 | INFO     | job 6895336436 has completed (purged errors)
[2025-11-26 17:46:16] 2025-11-26 22:45:35,460 | INFO     | overall cleanup function is called
[2025-11-26 17:46:16] 2025-11-26 22:45:36,477 | INFO     | --- collectZombieJob: --- 10, [2934127]
[2025-11-26 17:46:16] 2025-11-26 22:45:36,478 | INFO     | zombie collector waiting for pid 2934127
[2025-11-26 17:46:16] 2025-11-26 22:45:36,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:46:16] 2025-11-26 22:45:36,478 | INFO     | collected zombie processes
[2025-11-26 17:46:16] 2025-11-26 22:45:36,478 | INFO     | will attempt to kill all subprocesses of pid=2934127
[2025-11-26 17:46:16] 2025-11-26 22:45:36,682 | INFO     | process IDs to be killed: [2934127] (in reverse order)
[2025-11-26 17:46:16] 2025-11-26 22:45:36,738 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:46:16] 2025-11-26 22:45:36,738 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:46:16] 2025-11-26 22:45:36,744 | INFO     | did not find any defunct processes belonging to 2934127
[2025-11-26 17:46:16] 2025-11-26 22:45:36,749 | INFO     | did not find any defunct processes belonging to 2934127
[2025-11-26 17:46:16] 2025-11-26 22:45:36,750 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:46:16] 2025-11-26 22:45:36,750 | INFO     | ready for new job
[2025-11-26 17:46:16] 2025-11-26 22:45:36,751 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:46:16] 2025-11-26 22:45:36,753 | INFO     | ***************************************
[2025-11-26 17:46:16] 2025-11-26 22:45:36,754 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:46:16] 2025-11-26 22:45:36,754 | INFO     | ***************************************
[2025-11-26 17:46:16] 2025-11-26 22:45:36,754 | INFO     | 
[2025-11-26 17:46:16] 2025-11-26 22:45:36,756 | INFO     | architecture information:
[2025-11-26 17:46:16] 2025-11-26 22:45:36,756 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:46:16] 2025-11-26 22:45:36,767 | INFO     | cat /etc/os-release:
[2025-11-26 17:46:16] NAME="CentOS Linux"
[2025-11-26 17:46:16] VERSION="7 (Core)"
[2025-11-26 17:46:16] ID="centos"
[2025-11-26 17:46:16] ID_LIKE="rhel fedora"
[2025-11-26 17:46:16] VERSION_ID="7"
[2025-11-26 17:46:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:46:16] ANSI_COLOR="0;31"
[2025-11-26 17:46:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:46:16] HOME_URL="https://www.centos.org/"
[2025-11-26 17:46:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:46:16] 
[2025-11-26 17:46:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:46:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:46:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:46:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:46:16] 
[2025-11-26 17:46:16] 2025-11-26 22:45:36,767 | INFO     | ***************************************
[2025-11-26 17:46:16] 2025-11-26 22:45:37,270 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 17:46:16] 2025-11-26 22:45:37,283 | INFO     | sufficient remaining disk space (38851837952 B)
[2025-11-26 17:46:16] 2025-11-26 22:45:37,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:46:16] 2025-11-26 22:45:37,284 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:46:16] 2025-11-26 22:45:37,284 | INFO     | update_server=False
[2025-11-26 17:46:16] 2025-11-26 22:45:37,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:46:16] 2025-11-26 22:45:37,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:46:16] 2025-11-26 22:45:37,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:46:16] 2025-11-26 22:45:37,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:46:16] 2025-11-26 22:45:37,285 | INFO     | aborting loop
[2025-11-26 17:46:16] 2025-11-26 22:45:37,363 | INFO     | all payload control threads have been joined
[2025-11-26 17:46:16] 2025-11-26 22:45:37,855 | INFO     | all data control threads have been joined
[2025-11-26 17:46:16] 2025-11-26 22:45:37,892 | INFO     | all job control threads have been joined
[2025-11-26 17:46:16] 2025-11-26 22:45:38,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:46:16] 2025-11-26 22:45:38,289 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:38,290 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:38,290 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:38,368 | INFO     | [payload] control thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:38,581 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:38,641 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:38,794 | INFO     | [job] validate thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:38,861 | INFO     | [data] control thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:38,897 | INFO     | [job] control thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:38,954 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:38,994 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:39,239 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:39,285 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:39,449 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:40,234 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:45:41,291 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:46:16] 2025-11-26 22:46:07,537 | INFO     | PID=2927643 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:46:16] 2025-11-26 22:46:07,537 | INFO     | .. there are 3 such processes running
[2025-11-26 17:46:16] 2025-11-26 22:46:07,538 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:46:16] 2025-11-26 22:46:07,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:46:16] 2025-11-26 22:46:07,538 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:46:16] 2025-11-26 22:46:09,377 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:46:16] 2025-11-26 22:46:11,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140111230523200)>', '<ExcThread(monitor, started 140110725101312)>']
[2025-11-26 17:46:16] 2025-11-26 22:46:11,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:46:16] 2025-11-26 22:46:11,558 | INFO     | [monitor] control thread has ended
[2025-11-26 17:46:16] 2025-11-26 22:46:16,433 | INFO     | all workflow threads have been joined
[2025-11-26 17:46:16] 2025-11-26 22:46:16,434 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:46:16] 2025-11-26 22:46:16,434 | INFO     | traces error code: 0
[2025-11-26 17:46:16] 2025-11-26 22:46:16,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:46:16] 2025-11-26 22:46:16,534 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:46:16] 2025-11-26 22:46:16,537 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:46:16] 2025-11-26 22:46:16,539 [wrapper] pilotpid: 2927643
[2025-11-26 17:46:16] 2025-11-26 22:46:16,542 [wrapper] Pilot exit status: 0
[2025-11-26 17:46:16] 2025-11-26 22:46:16,550 [wrapper] pandaids: 6895336436
[2025-11-26 17:46:16] 2025-11-26 22:46:16,589 [wrapper] cleanup supervisor_pilot 3396537 2927644
[2025-11-26 17:46:16] 2025-11-26 22:46:16,591 [wrapper] Test setup, not cleaning
[2025-11-26 17:46:16] 2025-11-26 22:46:16,594 [wrapper] apfmon messages muted
[2025-11-26 17:46:16] 2025-11-26 22:46:16,596 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:46:16] 2025-11-26 22:46:16,599 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:46:16]  *** Error codes and diagnostics ***
[2025-11-26 17:46:16]     "exeErrorCode": 0,
[2025-11-26 17:46:16]     "exeErrorDiag": "",
[2025-11-26 17:46:16]     "pilotErrorCode": 0,
[2025-11-26 17:46:16]     "pilotErrorDiag": "",
[2025-11-26 17:46:16]  *** Listing of results directory ***
[2025-11-26 17:46:16] total 1312900
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 00:12 pilot3.tar.gz
[2025-11-26 17:46:16] -rwx------. 1 boincer umatlas     36292 Nov 22 00:33 runpilot2-wrapper.sh
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 00:33 queuedata.json
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas       100 Nov 26 09:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:46:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 09:00 run_atlas
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas       105 Nov 26 09:00 job.xml
[2025-11-26 17:46:16] -rw-r--r--. 2 boincer umatlas 412594984 Nov 26 09:00 EVNT.47483658._000281.pool.root.1
[2025-11-26 17:46:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:00 start_atlas.sh
[2025-11-26 17:46:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 09:00 shared
[2025-11-26 17:46:16] -rw-r--r--. 2 boincer umatlas    590094 Nov 26 09:00 input.tar.gz
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas         0 Nov 26 09:00 boinc_lockfile
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas      2783 Nov 26 09:00 pandaJob.out
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas    991830 Nov 26 09:00 agis_schedconf.cvmfs.json
[2025-11-26 17:46:16] drwx------. 5 boincer umatlas      4096 Nov 26 09:00 pilot3
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas      6532 Nov 26 17:37 init_data.xml
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas       533 Nov 26 17:38 boinc_task_state.xml
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas 915057424 Nov 26 17:44 HITS.47556137._002771.pool.root.1
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas      1045 Nov 26 17:45 memory_monitor_summary.json
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas   1516240 Nov 26 17:45 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas   1923223 Nov 26 17:45 log.47556137._002771.job.log.tgz.1
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas        95 Nov 26 17:45 pilot_heartbeat.json
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas      8616 Nov 26 17:45 heartbeat.json
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:46 wrapper_checkpoint.txt
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas      4823 Nov 26 17:46 pilotlog.txt
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:46 boinc_mmap_file
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas   4494093 Nov 26 17:46 log.47556137._002771.job.log.1
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas       353 Nov 26 17:46 output.list
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:46 runtime_log
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas   6440960 Nov 26 17:46 result.tar.gz
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas       659 Nov 26 17:46 x42LDmYQvg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9yHKDmdbENem.diag
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas      8818 Nov 26 17:46 runtime_log.err
[2025-11-26 17:46:16] -rw-r--r--. 1 boincer umatlas     21320 Nov 26 17:46 stderr.txt
[2025-11-26 17:46:16] HITS file was successfully produced:
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas 915057424 Nov 26 17:44 shared/HITS.pool.root.1
[2025-11-26 17:46:16]  *** Contents of shared directory: ***
[2025-11-26 17:46:16] total 1303432
[2025-11-26 17:46:16] -rw-r--r--. 2 boincer umatlas 412594984 Nov 26 09:00 ATLAS.root_0
[2025-11-26 17:46:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:00 start_atlas.sh
[2025-11-26 17:46:16] -rw-r--r--. 2 boincer umatlas    590094 Nov 26 09:00 input.tar.gz
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas 915057424 Nov 26 17:44 HITS.pool.root.1
[2025-11-26 17:46:16] -rw-------. 1 boincer umatlas   6440960 Nov 26 17:46 result.tar.gz
17:46:17 (2923883): run_atlas exited; CPU time 279237.522046
17:46:17 (2923883): called boinc_finish(0)

</stderr_txt>
]]>

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