Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:31:35 (184776): wrapper (7.7.26015): starting
09:31:35 (184776): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 09:31:35] Arguments: --nthreads 8
[2025-11-26 09:31:35] Threads: 8
[2025-11-26 09:31:35] Checking for CVMFS
[2025-11-26 09:31:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:31:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:31:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:31:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:31:35] 2.13.3.0 9393 30126 340740 153324 1 427 23272230 32935937 24236 16776704 0 111856460 99.531 133447114 39156 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 09:31:35] CVMFS is ok
[2025-11-26 09:31:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:31:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:31:35] Further information can be found at the LHC@home message board.
[2025-11-26 09:31:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:31:35] Checking for apptainer binary...
[2025-11-26 09:31:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:31:35] Running /usr/bin/apptainer --version
[2025-11-26 09:31:36] apptainer version 1.4.4-1.el9
[2025-11-26 09:31:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:31:36] c6-6-39-1.aglt2.org
[2025-11-26 09:31:36] apptainer works
[2025-11-26 09:31:36] Set ATHENA_PROC_NUMBER=8
[2025-11-26 09:31:36] Set ATHENA_CORE_NUMBER=8
[2025-11-26 09:31:36] Starting ATLAS job with PandaID=6896577836
[2025-11-26 09:31:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:56:17]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:56:17] 2025-11-27 08:29:21,100 | INFO     | monitor loop #4013: job 0:6896577836 is in state 'finished'
[2025-11-27 04:56:17] 2025-11-27 08:29:21,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:56:17] 2025-11-27 08:29:21,169 | INFO     | time since job start (64649s) is within the limit (172800.0s)
[2025-11-27 04:56:17] 2025-11-27 08:29:21,783 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 04:56:17] 2025-11-27 08:29:21,792 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2793.1698571428565
[2025-11-27 04:56:17] 2025-11-27 08:29:21,802 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6896577836/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:56:17] 2025-11-27 08:29:21,802 | INFO     | extracted standard info from prmon json
[2025-11-27 04:56:17] 2025-11-27 08:29:21,803 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:56:17] 2025-11-27 08:29:21,803 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:56:17] 2025-11-27 08:29:21,818 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:56:17] 2025-11-27 08:29:21,820 | INFO     | sum of square deviations: 368286288361.2656
[2025-11-27 04:56:17] 2025-11-27 08:29:21,840 | INFO     | sum of deviations: 2990374546481.712
[2025-11-27 04:56:17] 2025-11-27 08:29:21,840 | INFO     | mean x: 1764199829.6128423
[2025-11-27 04:56:17] 2025-11-27 08:29:21,841 | INFO     | mean y: 2914320.521246459
[2025-11-27 04:56:17] 2025-11-27 08:29:21,841 | INFO     | intersect: -14321860812.585442
[2025-11-27 04:56:17] 2025-11-27 08:29:21,842 | INFO     | chi2: 5.885803554018005
[2025-11-27 04:56:17] 2025-11-27 08:29:21,843 | INFO     | sum of square deviations: 363095111945.69684
[2025-11-27 04:56:17] 2025-11-27 08:29:21,863 | INFO     | sum of deviations: 3298019777453.842
[2025-11-27 04:56:17] 2025-11-27 08:29:21,864 | INFO     | mean x: 1764199677.1204934
[2025-11-27 04:56:17] 2025-11-27 08:29:21,864 | INFO     | mean y: 2923355.2296015183
[2025-11-27 04:56:17] 2025-11-27 08:29:21,864 | INFO     | intersect: -16021432894.962065
[2025-11-27 04:56:17] 2025-11-27 08:29:21,865 | INFO     | chi2: 3.459199224291163
[2025-11-27 04:56:17] 2025-11-27 08:29:21,865 | INFO     | current chi2=3.459199224291163 (change=41.22808903586827 %)
[2025-11-27 04:56:17] 2025-11-27 08:29:21,867 | INFO     | sum of square deviations: 357952895657.26117
[2025-11-27 04:56:17] 2025-11-27 08:29:21,889 | INFO     | sum of deviations: 3334941810663.269
[2025-11-27 04:56:17] 2025-11-27 08:29:21,890 | INFO     | mean x: 1764199524.627264
[2025-11-27 04:56:17] 2025-11-27 08:29:21,890 | INFO     | mean y: 2924444.466158246
[2025-11-27 04:56:17] 2025-11-27 08:29:21,890 | INFO     | intersect: -16433603457.420584
[2025-11-27 04:56:17] 2025-11-27 08:29:21,891 | INFO     | chi2: 3.2297023532243827
[2025-11-27 04:56:17] 2025-11-27 08:29:21,892 | INFO     | current chi2=3.2297023532243827 (change=6.634392996367742 %)
[2025-11-27 04:56:17] 2025-11-27 08:29:21,892 | INFO     | right removable region: 1048
[2025-11-27 04:56:17] 2025-11-27 08:29:21,893 | INFO     | sum of square deviations: 363094070065.697
[2025-11-27 04:56:17] 2025-11-27 08:29:21,915 | INFO     | sum of deviations: 2631896768901.8945
[2025-11-27 04:56:17] 2025-11-27 08:29:21,915 | INFO     | mean x: 1764199982.1204934
[2025-11-27 04:56:17] 2025-11-27 08:29:21,916 | INFO     | mean y: 2924843.819734345
[2025-11-27 04:56:17] 2025-11-27 08:29:21,916 | INFO     | intersect: -12784924409.12891
[2025-11-27 04:56:17] 2025-11-27 08:29:21,917 | INFO     | chi2: 2.983595147287167
[2025-11-27 04:56:17] 2025-11-27 08:29:21,918 | INFO     | current chi2=2.983595147287167 (change=49.308618272684534 %)
[2025-11-27 04:56:17] 2025-11-27 08:29:21,919 | INFO     | sum of square deviations: 357951068833.76544
[2025-11-27 04:56:17] 2025-11-27 08:29:21,949 | INFO     | sum of deviations: 2527471621234.116
[2025-11-27 04:56:17] 2025-11-27 08:29:21,950 | INFO     | mean x: 1764200134.6253574
[2025-11-27 04:56:17] 2025-11-27 08:29:21,950 | INFO     | mean y: 2927936.672068637
[2025-11-27 04:56:17] 2025-11-27 08:29:21,950 | INFO     | intersect: -12453986325.298656
[2025-11-27 04:56:17] 2025-11-27 08:29:21,951 | INFO     | chi2: 2.776759507097584
[2025-11-27 04:56:17] 2025-11-27 08:29:21,951 | INFO     | current chi2=2.776759507097584 (change=6.9324298364558015 %)
[2025-11-27 04:56:17] 2025-11-27 08:29:21,951 | INFO     | left removable region: 20
[2025-11-27 04:56:17] 2025-11-27 08:29:21,953 | INFO     | sum of square deviations: 336883307493.6608
[2025-11-27 04:56:17] 2025-11-27 08:29:21,970 | INFO     | sum of deviations: 2771130762657.415
[2025-11-27 04:56:17] 2025-11-27 08:29:21,971 | INFO     | mean x: 1764200104.1371596
[2025-11-27 04:56:17] 2025-11-27 08:29:21,971 | INFO     | mean y: 2940997.046692607
[2025-11-27 04:56:17] 2025-11-27 08:29:21,971 | INFO     | intersect: -14508995543.916803
[2025-11-27 04:56:17] 2025-11-27 08:29:21,972 | INFO     | chi2: 0.0936000195848308
[2025-11-27 04:56:17] 2025-11-27 08:29:21,972 | INFO     | current memory leak: 8.23 B/s (using 1028 data points, chi2=0.09)
[2025-11-27 04:56:17] 2025-11-27 08:29:21,973 | INFO     | could have reported an average CPU frequency of 2956 MHz (39 samples)
[2025-11-27 04:56:17] 2025-11-27 08:29:21,974 | INFO     | ..............................
[2025-11-27 04:56:17] 2025-11-27 08:29:21,974 | INFO     | . Timing measurements:
[2025-11-27 04:56:17] 2025-11-27 08:29:21,974 | INFO     | . get job = 0 s
[2025-11-27 04:56:17] 2025-11-27 08:29:21,974 | INFO     | . initial setup = 2 s
[2025-11-27 04:56:17] 2025-11-27 08:29:21,974 | INFO     | . payload setup = 12 s
[2025-11-27 04:56:17] 2025-11-27 08:29:21,974 | INFO     | . stage-in = 0 s
[2025-11-27 04:56:17] 2025-11-27 08:29:21,974 | INFO     | . payload execution = 64602 s
[2025-11-27 04:56:17] 2025-11-27 08:29:21,974 | INFO     | . stage-out = 3 s
[2025-11-27 04:56:17] 2025-11-27 08:29:21,974 | INFO     | . log creation = 0 s
[2025-11-27 04:56:17] 2025-11-27 08:29:21,974 | INFO     | ..............................
[2025-11-27 04:56:17] 2025-11-27 08:29:22,058 | INFO     | 
[2025-11-27 04:56:17] 2025-11-27 08:29:22,058 | INFO     | job summary report
[2025-11-27 04:56:17] 2025-11-27 08:29:22,058 | INFO     | --------------------------------------------------
[2025-11-27 04:56:17] 2025-11-27 08:29:22,058 | INFO     | PanDA job id: 6896577836
[2025-11-27 04:56:17] 2025-11-27 08:29:22,058 | INFO     | task id: 47556161
[2025-11-27 04:56:17] 2025-11-27 08:29:22,058 | INFO     | errors: (none)
[2025-11-27 04:56:17] 2025-11-27 08:29:22,058 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:56:17] 2025-11-27 08:29:22,058 | INFO     | pilot state: finished 
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | transexitcode: 0
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | exeerrorcode: 0
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | exeerrordiag: 
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | exitcode: 0
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | exitmsg: OK
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | cpuconsumptiontime: 243338 s
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | nevents: 1000
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | neventsw: 0
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | pid: 195538
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | pgrp: 195538
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | corecount: 8
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | event service: False
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | sizes: {0: 2283434, 1: 2284290, 9: 2284552, 12: 2284580, 64617: 2340052, 64621: 2349046, 64624: 2349258, 64630: 2349504}
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | --------------------------------------------------
[2025-11-27 04:56:17] 2025-11-27 08:29:22,059 | INFO     | 
[2025-11-27 04:56:17] 2025-11-27 08:29:22,060 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 04:56:17] 2025-11-27 08:29:22,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,081 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,081 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,081 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:56:17] 2025-11-27 08:29:22,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:56:17] 2025-11-27 08:29:22,083 | INFO     | job 6896577836 has completed (purged errors)
[2025-11-27 04:56:17] 2025-11-27 08:29:22,083 | INFO     | overall cleanup function is called
[2025-11-27 04:56:17] 2025-11-27 08:29:23,103 | INFO     | --- collectZombieJob: --- 10, [195538]
[2025-11-27 04:56:17] 2025-11-27 08:29:23,103 | INFO     | zombie collector waiting for pid 195538
[2025-11-27 04:56:17] 2025-11-27 08:29:23,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:56:17] 2025-11-27 08:29:23,103 | INFO     | collected zombie processes
[2025-11-27 04:56:17] 2025-11-27 08:29:23,103 | INFO     | will attempt to kill all subprocesses of pid=195538
[2025-11-27 04:56:17] 2025-11-27 08:29:23,506 | INFO     | process IDs to be killed: [195538] (in reverse order)
[2025-11-27 04:56:17] 2025-11-27 08:29:23,677 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:56:17] 2025-11-27 08:29:23,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:56:17] 2025-11-27 08:29:23,693 | INFO     | did not find any defunct processes belonging to 195538
[2025-11-27 04:56:17] 2025-11-27 08:29:23,709 | INFO     | did not find any defunct processes belonging to 195538
[2025-11-27 04:56:17] 2025-11-27 08:29:23,710 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:56:17] 2025-11-27 08:29:23,710 | INFO     | ready for new job
[2025-11-27 04:56:17] 2025-11-27 08:29:23,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:56:17] 2025-11-27 08:29:23,716 | INFO     | ***************************************
[2025-11-27 04:56:17] 2025-11-27 08:29:23,716 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:56:17] 2025-11-27 08:29:23,716 | INFO     | ***************************************
[2025-11-27 04:56:17] 2025-11-27 08:29:23,716 | INFO     | 
[2025-11-27 04:56:17] 2025-11-27 08:29:23,719 | INFO     | architecture information:
[2025-11-27 04:56:17] 2025-11-27 08:29:23,720 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:56:17] 2025-11-27 08:29:23,737 | INFO     | cat /etc/os-release:
[2025-11-27 04:56:17] NAME="CentOS Linux"
[2025-11-27 04:56:17] VERSION="7 (Core)"
[2025-11-27 04:56:17] ID="centos"
[2025-11-27 04:56:17] ID_LIKE="rhel fedora"
[2025-11-27 04:56:17] VERSION_ID="7"
[2025-11-27 04:56:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:56:17] ANSI_COLOR="0;31"
[2025-11-27 04:56:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:56:17] HOME_URL="https://www.centos.org/"
[2025-11-27 04:56:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:56:17] 
[2025-11-27 04:56:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:56:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:56:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:56:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:56:17] 
[2025-11-27 04:56:17] 2025-11-27 08:29:23,737 | INFO     | ***************************************
[2025-11-27 04:56:17] 2025-11-27 08:29:24,244 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 04:56:17] 2025-11-27 08:29:24,282 | INFO     | sufficient remaining disk space (70523027456 B)
[2025-11-27 04:56:17] 2025-11-27 08:29:24,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:56:17] 2025-11-27 08:29:24,283 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:56:17] 2025-11-27 08:29:24,283 | INFO     | update_server=False
[2025-11-27 04:56:17] 2025-11-27 08:29:24,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:56:17] 2025-11-27 08:29:24,283 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:56:17] 2025-11-27 08:29:24,350 | INFO     | all payload control threads have been joined
[2025-11-27 04:56:17] 2025-11-27 08:29:24,468 | INFO     | all job control threads have been joined
[2025-11-27 04:56:17] 2025-11-27 08:29:24,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:56:17] 2025-11-27 08:29:24,611 | INFO     | aborting loop
[2025-11-27 04:56:17] 2025-11-27 08:29:25,250 | INFO     | all data control threads have been joined
[2025-11-27 04:56:17] 2025-11-27 08:29:25,289 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:25,356 | INFO     | [payload] control thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:25,474 | INFO     | [job] control thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:25,625 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:25,686 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:26,101 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:26,103 | INFO     | [job] validate thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:26,256 | INFO     | [data] control thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:26,278 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:26,291 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:26,553 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:26,580 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:26,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:56:17] 2025-11-27 08:29:26,718 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:26,824 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:27,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:56:17] 2025-11-27 08:29:28,078 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:30,736 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:56:17] 2025-11-27 08:29:46,492 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:56:17] 2025-11-27 08:29:47,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600488576832)>', '<ExcThread(monitor, started 140599780964096)>']
[2025-11-27 04:56:17] 2025-11-27 08:29:52,156 | INFO     | all workflow threads have been joined
[2025-11-27 04:56:17] 2025-11-27 08:29:52,157 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:56:17] 2025-11-27 08:29:52,157 | INFO     | traces error code: 0
[2025-11-27 04:56:17] 2025-11-27 08:29:52,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:56:17] 2025-11-27 08:29:54,724 | INFO     | PID=188498 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 04:56:17] 2025-11-27 08:29:54,725 | INFO     | .. there are 33 such processes running
[2025-11-27 04:56:17] 2025-11-27 08:29:54,726 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:56:17] 2025-11-27 08:29:54,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:56:17] 2025-11-27 08:29:54,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:56:17] 2025-11-27 08:29:54,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:56:17] 2025-11-27 08:29:54,726 | INFO     | [monitor] control thread has ended
[2025-11-27 04:56:17] 2025-11-27 08:29:54,976 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:56:17] 2025-11-27 08:29:54,979 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:56:17] 2025-11-27 08:29:54,981 [wrapper] pilotpid: 188498
[2025-11-27 04:56:17] 2025-11-27 08:29:54,984 [wrapper] Pilot exit status: 0
[2025-11-27 04:56:17] 2025-11-27 08:29:55,003 [wrapper] pandaids: 6896577836
[2025-11-27 04:56:17] 2025-11-27 08:29:55,092 [wrapper] cleanup supervisor_pilot 3943133 188499
[2025-11-27 04:56:17] 2025-11-27 08:29:55,098 [wrapper] Test setup, not cleaning
[2025-11-27 04:56:17] 2025-11-27 08:29:55,102 [wrapper] apfmon messages muted
[2025-11-27 04:56:17] 2025-11-27 08:29:55,105 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:56:17] 2025-11-27 08:29:55,107 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:56:17]  *** Error codes and diagnostics ***
[2025-11-27 04:56:17]     "exeErrorCode": 0,
[2025-11-27 04:56:17]     "exeErrorDiag": "",
[2025-11-27 04:56:17]     "pilotErrorCode": 0,
[2025-11-27 04:56:17]     "pilotErrorDiag": "",
[2025-11-27 04:56:17]  *** Listing of results directory ***
[2025-11-27 04:56:17] total 1333056
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:25 queuedata.json
[2025-11-27 04:56:17] -rwx------. 1 boincer umatlas     36292 Nov 25 00:27 runpilot2-wrapper.sh
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas       100 Nov 26 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:56:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 09:31 run_atlas
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas       105 Nov 26 09:31 job.xml
[2025-11-27 04:56:17] -rw-r--r--. 2 boincer umatlas 410490042 Nov 26 09:31 EVNT.47483658._002103.pool.root.1
[2025-11-27 04:56:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:31 start_atlas.sh
[2025-11-27 04:56:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 09:31 shared
[2025-11-27 04:56:17] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 09:31 input.tar.gz
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas         0 Nov 26 09:31 boinc_lockfile
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 09:31 pandaJob.out
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas        57 Nov 26 09:31 setup.sh.local
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas    992360 Nov 26 09:31 agis_schedconf.cvmfs.json
[2025-11-27 04:56:17] drwx------. 5 boincer umatlas      4096 Nov 26 09:31 pilot3
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas       532 Nov 27 03:20 boinc_task_state.xml
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas 929580700 Nov 27 03:28 HITS.47556161._000866.pool.root.1
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas      1058 Nov 27 03:29 memory_monitor_summary.json
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:29 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas   2197329 Nov 27 03:29 log.47556161._000866.job.log.tgz.1
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas      8629 Nov 27 03:29 heartbeat.json
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas       822 Nov 27 03:29 pilotlog.txt
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas        95 Nov 27 03:29 pilot_heartbeat.json
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas   8331974 Nov 27 03:29 log.47556161._000866.job.log.1
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas       353 Nov 27 03:29 output.list
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:29 runtime_log
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas  10547200 Nov 27 03:29 result.tar.gz
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 03:29 runtime_log.err
[2025-11-27 04:56:17] -rw-------. 1 boincer umatlas       661 Nov 27 03:29 m46MDmfl0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlAMKDmpkCrNm.diag
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas      6845 Nov 27 04:56 init_data.xml
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 04:56 boinc_mmap_file
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas        29 Nov 27 04:56 wrapper_checkpoint.txt
[2025-11-27 04:56:17] -rw-r--r--. 1 boincer umatlas     21331 Nov 27 04:56 stderr.txt
[2025-11-27 04:56:18] HITS file was successfully produced:
[2025-11-27 04:56:18] -rw-------. 1 boincer umatlas 929580700 Nov 27 03:28 shared/HITS.pool.root.1
[2025-11-27 04:56:18]  *** Contents of shared directory: ***
[2025-11-27 04:56:18] total 1319572
[2025-11-27 04:56:18] -rw-r--r--. 2 boincer umatlas 410490042 Nov 26 09:31 ATLAS.root_0
[2025-11-27 04:56:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 09:31 start_atlas.sh
[2025-11-27 04:56:18] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 09:31 input.tar.gz
[2025-11-27 04:56:18] -rw-------. 1 boincer umatlas 929580700 Nov 27 03:28 HITS.pool.root.1
[2025-11-27 04:56:18] -rw-------. 1 boincer umatlas  10547200 Nov 27 03:29 result.tar.gz
04:56:19 (184776): run_atlas exited; CPU time 245068.475732
04:56:19 (184776): called boinc_finish(0)

</stderr_txt>
]]>

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