Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:49:25 (3285662): wrapper (7.7.26015): starting
08:49:25 (3285662): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 08:49:25] Arguments: --nthreads 8
[2025-11-26 08:49:25] Threads: 8
[2025-11-26 08:49:25] Checking for CVMFS
[2025-11-26 08:49:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:49:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:49:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:49:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:49:26] 2.13.3.0 12548 30129 377568 153323 1 681 38575022 40960001 34173 16776704 34 145937199 99.615 140125469 35630 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 08:49:26] CVMFS is ok
[2025-11-26 08:49:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:49:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:49:26] Further information can be found at the LHC@home message board.
[2025-11-26 08:49:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:49:26] Checking for apptainer binary...
[2025-11-26 08:49:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:49:26] Running /usr/bin/apptainer --version
[2025-11-26 08:49:26] apptainer version 1.4.4-1.el9
[2025-11-26 08:49:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:49:26] c7-11-12.aglt2.org
[2025-11-26 08:49:26] apptainer works
[2025-11-26 08:49:26] Set ATHENA_PROC_NUMBER=8
[2025-11-26 08:49:26] Set ATHENA_CORE_NUMBER=8
[2025-11-26 08:49:26] Starting ATLAS job with PandaID=6891555880
[2025-11-26 08:49:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:51:09]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:51:09] 2025-11-27 01:50:34,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,608 | INFO     | time since job start (43249s) is within the limit (172800.0s)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,627 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 20:51:09] 2025-11-27 01:50:34,632 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3258.6554843750005
[2025-11-26 20:51:09] 2025-11-27 01:50:34,646 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6891555880/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,652 | INFO     | extracted standard info from prmon json
[2025-11-26 20:51:09] 2025-11-27 01:50:34,652 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 20:51:09] 2025-11-27 01:50:34,652 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 20:51:09] 2025-11-27 01:50:34,662 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:51:09] 2025-11-27 01:50:34,662 | INFO     | sum of square deviations: 110512332928.33896
[2025-11-26 20:51:09] 2025-11-27 01:50:34,671 | INFO     | sum of deviations: 722564757914.9867
[2025-11-26 20:51:09] 2025-11-27 01:50:34,671 | INFO     | mean x: 1764186618.6544428
[2025-11-26 20:51:09] 2025-11-27 01:50:34,671 | INFO     | mean y: 2884425.30606488
[2025-11-26 20:51:09] 2025-11-27 01:50:34,672 | INFO     | intersect: -11531928416.365671
[2025-11-26 20:51:09] 2025-11-27 01:50:34,672 | INFO     | chi2: 6.398139049965138
[2025-11-26 20:51:09] 2025-11-27 01:50:34,673 | INFO     | sum of square deviations: 108190830916.18155
[2025-11-26 20:51:09] 2025-11-27 01:50:34,683 | INFO     | sum of deviations: 977133088144.9087
[2025-11-26 20:51:09] 2025-11-27 01:50:34,683 | INFO     | mean x: 1764186466.159091
[2025-11-26 20:51:09] 2025-11-27 01:50:34,683 | INFO     | mean y: 2901148.6079545454
[2025-11-26 20:51:09] 2025-11-27 01:50:34,683 | INFO     | intersect: -15930472827.20518
[2025-11-26 20:51:09] 2025-11-27 01:50:34,684 | INFO     | chi2: 2.8740005942074247
[2025-11-26 20:51:09] 2025-11-27 01:50:34,684 | INFO     | current chi2=2.8740005942074247 (change=55.080679369994556 %)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,685 | INFO     | sum of square deviations: 105902031004.32056
[2025-11-26 20:51:09] 2025-11-27 01:50:34,694 | INFO     | sum of deviations: 1017016169240.3279
[2025-11-26 20:51:09] 2025-11-27 01:50:34,694 | INFO     | mean x: 1764186313.6623747
[2025-11-26 20:51:09] 2025-11-27 01:50:34,694 | INFO     | mean y: 2903794.886981402
[2025-11-26 20:51:09] 2025-11-27 01:50:34,694 | INFO     | intersect: -16939226488.46825
[2025-11-26 20:51:09] 2025-11-27 01:50:34,695 | INFO     | chi2: 2.6178337853686062
[2025-11-26 20:51:09] 2025-11-27 01:50:34,695 | INFO     | current chi2=2.6178337853686062 (change=8.91324829073192 %)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,695 | INFO     | right removable region: 698
[2025-11-26 20:51:09] 2025-11-27 01:50:34,696 | INFO     | sum of square deviations: 108190547876.18158
[2025-11-26 20:51:09] 2025-11-27 01:50:34,706 | INFO     | sum of deviations: 523977741715.9319
[2025-11-26 20:51:09] 2025-11-27 01:50:34,706 | INFO     | mean x: 1764186771.159091
[2025-11-26 20:51:09] 2025-11-27 01:50:34,706 | INFO     | mean y: 2897446.205965909
[2025-11-26 20:51:09] 2025-11-27 01:50:34,706 | INFO     | intersect: -8541237124.357289
[2025-11-26 20:51:09] 2025-11-27 01:50:34,707 | INFO     | chi2: 4.03994347919796
[2025-11-26 20:51:09] 2025-11-27 01:50:34,707 | INFO     | current chi2=4.03994347919796 (change=36.85752298209317 %)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,708 | INFO     | sum of square deviations: 105901593634.64388
[2025-11-26 20:51:09] 2025-11-27 01:50:34,717 | INFO     | sum of deviations: 473179681223.4068
[2025-11-26 20:51:09] 2025-11-27 01:50:34,717 | INFO     | mean x: 1764186923.6609442
[2025-11-26 20:51:09] 2025-11-27 01:50:34,717 | INFO     | mean y: 2900829.3519313303
[2025-11-26 20:51:09] 2025-11-27 01:50:34,718 | INFO     | intersect: -7879675603.221273
[2025-11-26 20:51:09] 2025-11-27 01:50:34,718 | INFO     | chi2: 3.9625206875271775
[2025-11-26 20:51:09] 2025-11-27 01:50:34,718 | INFO     | current chi2=3.9625206875271775 (change=1.9164325458868228 %)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,718 | INFO     | left removable region: 20
[2025-11-26 20:51:09] 2025-11-27 01:50:34,719 | INFO     | sum of square deviations: 96640739516.80927
[2025-11-26 20:51:09] 2025-11-27 01:50:34,728 | INFO     | sum of deviations: 698310277460.518
[2025-11-26 20:51:09] 2025-11-27 01:50:34,728 | INFO     | mean x: 1764186893.1725664
[2025-11-26 20:51:09] 2025-11-27 01:50:34,728 | INFO     | mean y: 2925201.9955752213
[2025-11-26 20:51:09] 2025-11-27 01:50:34,728 | INFO     | intersect: -12744802568.1263
[2025-11-26 20:51:09] 2025-11-27 01:50:34,729 | INFO     | chi2: 0.11374603717470433
[2025-11-26 20:51:09] 2025-11-27 01:50:34,729 | INFO     | current memory leak: 7.23 B/s (using 678 data points, chi2=0.11)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,730 | INFO     | could have reported an average CPU frequency of 3282 MHz (27 samples)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,730 | INFO     | ..............................
[2025-11-26 20:51:09] 2025-11-27 01:50:34,730 | INFO     | . Timing measurements:
[2025-11-26 20:51:09] 2025-11-27 01:50:34,730 | INFO     | . get job = 0 s
[2025-11-26 20:51:09] 2025-11-27 01:50:34,730 | INFO     | . initial setup = 3 s
[2025-11-26 20:51:09] 2025-11-27 01:50:34,730 | INFO     | . payload setup = 11 s
[2025-11-26 20:51:09] 2025-11-27 01:50:34,730 | INFO     | . stage-in = 0 s
[2025-11-26 20:51:09] 2025-11-27 01:50:34,731 | INFO     | . payload execution = 43200 s
[2025-11-26 20:51:09] 2025-11-27 01:50:34,731 | INFO     | . stage-out = 4 s
[2025-11-26 20:51:09] 2025-11-27 01:50:34,731 | INFO     | . log creation = 0 s
[2025-11-26 20:51:09] 2025-11-27 01:50:34,731 | INFO     | ..............................
[2025-11-26 20:51:09] 2025-11-27 01:50:34,879 | INFO     | 
[2025-11-26 20:51:09] 2025-11-27 01:50:34,880 | INFO     | job summary report
[2025-11-26 20:51:09] 2025-11-27 01:50:34,880 | INFO     | --------------------------------------------------
[2025-11-26 20:51:09] 2025-11-27 01:50:34,880 | INFO     | PanDA job id: 6891555880
[2025-11-26 20:51:09] 2025-11-27 01:50:34,880 | INFO     | task id: 47493068
[2025-11-26 20:51:09] 2025-11-27 01:50:34,880 | INFO     | errors: (none)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,880 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:51:09] 2025-11-27 01:50:34,880 | INFO     | pilot state: finished 
[2025-11-26 20:51:09] 2025-11-27 01:50:34,880 | INFO     | transexitcode: 0
[2025-11-26 20:51:09] 2025-11-27 01:50:34,880 | INFO     | exeerrorcode: 0
[2025-11-26 20:51:09] 2025-11-27 01:50:34,880 | INFO     | exeerrordiag: 
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | exitcode: 0
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | exitmsg: OK
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | cpuconsumptiontime: 198011 s
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | nevents: 1000
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | neventsw: 0
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | pid: 3297686
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | pgrp: 3297686
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | corecount: 8
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | event service: False
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | sizes: {0: 2284129, 1: 2284328, 7: 2284590, 11: 2284618, 43215: 2330876, 43220: 2339870, 43222: 2340054, 43231: 2340300}
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | --------------------------------------------------
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | 
[2025-11-26 20:51:09] 2025-11-27 01:50:34,881 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 20:51:09] 2025-11-27 01:50:34,907 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,907 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,907 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,907 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,907 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,907 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | job 6891555880 has completed (purged errors)
[2025-11-26 20:51:09] 2025-11-27 01:50:34,908 | INFO     | overall cleanup function is called
[2025-11-26 20:51:09] 2025-11-27 01:50:35,926 | INFO     | --- collectZombieJob: --- 10, [3297686]
[2025-11-26 20:51:09] 2025-11-27 01:50:35,926 | INFO     | zombie collector waiting for pid 3297686
[2025-11-26 20:51:09] 2025-11-27 01:50:35,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:51:09] 2025-11-27 01:50:35,926 | INFO     | collected zombie processes
[2025-11-26 20:51:09] 2025-11-27 01:50:35,926 | INFO     | will attempt to kill all subprocesses of pid=3297686
[2025-11-26 20:51:09] 2025-11-27 01:50:36,466 | INFO     | process IDs to be killed: [3297686] (in reverse order)
[2025-11-26 20:51:09] 2025-11-27 01:50:36,640 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:51:09] 2025-11-27 01:50:36,640 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:51:09] 2025-11-27 01:50:36,662 | INFO     | did not find any defunct processes belonging to 3297686
[2025-11-26 20:51:09] 2025-11-27 01:50:36,692 | INFO     | did not find any defunct processes belonging to 3297686
[2025-11-26 20:51:09] 2025-11-27 01:50:36,696 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:51:09] 2025-11-27 01:50:36,697 | INFO     | ready for new job
[2025-11-26 20:51:09] 2025-11-27 01:50:36,697 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:51:09] 2025-11-27 01:50:36,702 | INFO     | ***************************************
[2025-11-26 20:51:09] 2025-11-27 01:50:36,702 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:51:09] 2025-11-27 01:50:36,702 | INFO     | ***************************************
[2025-11-26 20:51:09] 2025-11-27 01:50:36,702 | INFO     | 
[2025-11-26 20:51:09] 2025-11-27 01:50:36,706 | INFO     | architecture information:
[2025-11-26 20:51:09] 2025-11-27 01:50:36,711 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:51:09] 2025-11-27 01:50:36,730 | INFO     | cat /etc/os-release:
[2025-11-26 20:51:09] NAME="CentOS Linux"
[2025-11-26 20:51:09] VERSION="7 (Core)"
[2025-11-26 20:51:09] ID="centos"
[2025-11-26 20:51:09] ID_LIKE="rhel fedora"
[2025-11-26 20:51:09] VERSION_ID="7"
[2025-11-26 20:51:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:51:09] ANSI_COLOR="0;31"
[2025-11-26 20:51:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:51:09] HOME_URL="https://www.centos.org/"
[2025-11-26 20:51:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:51:09] 
[2025-11-26 20:51:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:51:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:51:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:51:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:51:09] 
[2025-11-26 20:51:09] 2025-11-27 01:50:36,730 | INFO     | ***************************************
[2025-11-26 20:51:09] 2025-11-27 01:50:37,237 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 20:51:09] 2025-11-27 01:50:37,289 | INFO     | sufficient remaining disk space (78648442880 B)
[2025-11-26 20:51:09] 2025-11-27 01:50:37,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:51:09] 2025-11-27 01:50:37,290 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:51:09] 2025-11-27 01:50:37,290 | INFO     | update_server=False
[2025-11-26 20:51:09] 2025-11-27 01:50:37,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:51:09] 2025-11-27 01:50:37,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:51:09] 2025-11-27 01:50:37,290 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:51:09] 2025-11-27 01:50:37,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:51:09] 2025-11-27 01:50:37,786 | INFO     | aborting loop
[2025-11-26 20:51:09] 2025-11-27 01:50:38,002 | INFO     | all data control threads have been joined
[2025-11-26 20:51:09] 2025-11-27 01:50:38,164 | INFO     | all job control threads have been joined
[2025-11-26 20:51:09] 2025-11-27 01:50:38,193 | INFO     | all payload control threads have been joined
[2025-11-26 20:51:09] 2025-11-27 01:50:38,296 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:38,461 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:38,747 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:38,758 | INFO     | [job] validate thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:38,799 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:38,859 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:39,009 | INFO     | [data] control thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:39,170 | INFO     | [job] control thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:39,181 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:39,203 | INFO     | [payload] control thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:39,295 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:39,296 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:39,409 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:39,841 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:51:09] 2025-11-27 01:50:40,848 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:41,298 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:48,029 | INFO     | job.realtimelogging is not enabled
[2025-11-26 20:51:09] 2025-11-27 01:50:49,036 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:51:09] 2025-11-27 01:50:58,785 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:51:09] 2025-11-27 01:51:00,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140411605706560)>', '<ExcThread(monitor, started 140410953373440)>']
[2025-11-26 20:51:09] 2025-11-27 01:51:05,832 | INFO     | all workflow threads have been joined
[2025-11-26 20:51:09] 2025-11-27 01:51:05,832 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:51:09] 2025-11-27 01:51:05,832 | INFO     | traces error code: 0
[2025-11-26 20:51:09] 2025-11-27 01:51:05,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:51:09] 2025-11-27 01:51:08,307 | INFO     | PID=3289832 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:51:09] 2025-11-27 01:51:08,308 | INFO     | .. there are 47 such processes running
[2025-11-26 20:51:09] 2025-11-27 01:51:08,308 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:51:09] 2025-11-27 01:51:08,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:51:09] 2025-11-27 01:51:08,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:51:09] 2025-11-27 01:51:08,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:51:09] 2025-11-27 01:51:08,308 | INFO     | [monitor] control thread has ended
[2025-11-26 20:51:09] 2025-11-27 01:51:08,491 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:51:09] 2025-11-27 01:51:08,517 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:51:09] 2025-11-27 01:51:08,543 [wrapper] pilotpid: 3289832
[2025-11-26 20:51:09] 2025-11-27 01:51:08,585 [wrapper] Pilot exit status: 0
[2025-11-26 20:51:09] 2025-11-27 01:51:08,751 [wrapper] pandaids: 6891555880
[2025-11-26 20:51:09] 2025-11-27 01:51:08,876 [wrapper] cleanup supervisor_pilot 2918215 3289833
[2025-11-26 20:51:09] 2025-11-27 01:51:08,879 [wrapper] Test setup, not cleaning
[2025-11-26 20:51:09] 2025-11-27 01:51:08,882 [wrapper] apfmon messages muted
[2025-11-26 20:51:09] 2025-11-27 01:51:08,884 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:51:09] 2025-11-27 01:51:08,888 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:51:09]  *** Error codes and diagnostics ***
[2025-11-26 20:51:09]     "exeErrorCode": 0,
[2025-11-26 20:51:09]     "exeErrorDiag": "",
[2025-11-26 20:51:09]     "pilotErrorCode": 0,
[2025-11-26 20:51:09]     "pilotErrorDiag": "",
[2025-11-26 20:51:09]  *** Listing of results directory ***
[2025-11-26 20:51:09] total 1323104
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:20 queuedata.json
[2025-11-26 20:51:09] -rwx------. 1 boincer umatlas     36292 Nov 18 10:21 runpilot2-wrapper.sh
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas       100 Nov 26 08:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:51:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 08:49 run_atlas
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas       105 Nov 26 08:49 job.xml
[2025-11-26 20:51:09] -rw-r--r--. 2 boincer umatlas 409690096 Nov 26 08:49 EVNT.47493065._000043.pool.root.1
[2025-11-26 20:51:09] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 08:49 start_atlas.sh
[2025-11-26 20:51:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 08:49 shared
[2025-11-26 20:51:09] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 08:49 input.tar.gz
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas         0 Nov 26 08:49 boinc_lockfile
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas      2771 Nov 26 08:49 pandaJob.out
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas    991830 Nov 26 08:49 agis_schedconf.cvmfs.json
[2025-11-26 20:51:09] drwx------. 5 boincer umatlas      4096 Nov 26 08:49 pilot3
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas       532 Nov 26 20:41 boinc_task_state.xml
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas      6903 Nov 26 20:48 init_data.xml
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas 925652221 Nov 26 20:49 HITS.47493068._000423.pool.root.1
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas      1057 Nov 26 20:50 memory_monitor_summary.json
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:50 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas        95 Nov 26 20:50 pilot_heartbeat.json
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas   1944653 Nov 26 20:50 log.47493068._000423.job.log.tgz.1
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas      8603 Nov 26 20:50 heartbeat.json
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas       823 Nov 26 20:51 pilotlog.txt
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas        29 Nov 26 20:51 wrapper_checkpoint.txt
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas   5855187 Nov 26 20:51 log.47493068._000423.job.log.1
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 20:51 boinc_mmap_file
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas       353 Nov 26 20:51 output.list
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:51 runtime_log
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas   7823360 Nov 26 20:51 result.tar.gz
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas      8704 Nov 26 20:51 runtime_log.err
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas       663 Nov 26 20:51 6P3MDmMhcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdIFKDm9CpGVm.diag
[2025-11-26 20:51:09] -rw-r--r--. 1 boincer umatlas     21316 Nov 26 20:51 stderr.txt
[2025-11-26 20:51:09] HITS file was successfully produced:
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas 925652221 Nov 26 20:49 shared/HITS.pool.root.1
[2025-11-26 20:51:09]  *** Contents of shared directory: ***
[2025-11-26 20:51:09] total 1312292
[2025-11-26 20:51:09] -rw-r--r--. 2 boincer umatlas 409690096 Nov 26 08:49 ATLAS.root_0
[2025-11-26 20:51:09] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 08:49 start_atlas.sh
[2025-11-26 20:51:09] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 08:49 input.tar.gz
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas 925652221 Nov 26 20:49 HITS.pool.root.1
[2025-11-26 20:51:09] -rw-------. 1 boincer umatlas   7823360 Nov 26 20:51 result.tar.gz
20:51:31 (3285662): run_atlas exited; CPU time 198068.249173
20:51:31 (3285662): called boinc_finish(0)

</stderr_txt>
]]>

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