Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:04:30 (4048365): wrapper (7.7.26015): starting
16:04:30 (4048365): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 16:04:30] Arguments: --nthreads 4
[2025-11-27 16:04:30] Threads: 4
[2025-11-27 16:04:30] Checking for CVMFS
[2025-11-27 16:04:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 16:04:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 16:04:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 16:04:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 16:04:31] 2.13.3.0 3983 4197 45856 153384 2 90 3595300 4096000 5950 130560 0 12980833 99.996 162438 3167 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 16:04:31] CVMFS is ok
[2025-11-27 16:04:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 16:04:31] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 16:04:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 16:04:31] Further information can be found at the LHC@home message board.
[2025-11-27 16:04:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 16:04:31] Checking for apptainer binary...
[2025-11-27 16:04:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 16:04:31] Running /usr/bin/apptainer --version
[2025-11-27 16:04:31] apptainer version 1.4.1
[2025-11-27 16:04:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 16:04:31] linux-7950X
[2025-11-27 16:04:31] apptainer works
[2025-11-27 16:04:31] Set ATHENA_PROC_NUMBER=4
[2025-11-27 16:04:31] Set ATHENA_CORE_NUMBER=4
[2025-11-27 16:04:31] Starting ATLAS job with PandaID=6896577550
[2025-11-27 16:04:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:57:31]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:57:31] 2025-11-28 04:57:03,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:57:31] 2025-11-28 04:57:04,896 | INFO     | time since job start (28347s) is within the limit (172800.0s)
[2025-11-27 23:57:31] 2025-11-28 04:57:04,967 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 23:57:31] 2025-11-28 04:57:04,971 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4620.15325
[2025-11-27 23:57:31] 2025-11-28 04:57:04,974 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6896577550/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:57:31] 2025-11-28 04:57:04,974 | INFO     | extracted standard info from prmon json
[2025-11-27 23:57:31] 2025-11-28 04:57:04,974 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:57:31] 2025-11-28 04:57:04,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:57:31] 2025-11-28 04:57:04,978 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:57:31] 2025-11-28 04:57:04,979 | INFO     | sum of square deviations: 31177068280.0
[2025-11-27 23:57:31] 2025-11-28 04:57:04,981 | INFO     | sum of deviations: 180728224030.99997
[2025-11-27 23:57:31] 2025-11-28 04:57:04,981 | INFO     | mean x: 1764291649.0
[2025-11-27 23:57:31] 2025-11-28 04:57:04,981 | INFO     | mean y: 2251022.146236559
[2025-11-27 23:57:31] 2025-11-28 04:57:04,981 | INFO     | intersect: -10225051094.03896
[2025-11-27 23:57:31] 2025-11-28 04:57:04,982 | INFO     | chi2: 2.6314988791975567
[2025-11-27 23:57:31] 2025-11-28 04:57:04,982 | INFO     | sum of square deviations: 30182128695.0
[2025-11-27 23:57:31] 2025-11-28 04:57:04,985 | INFO     | sum of deviations: 238695751313.5
[2025-11-27 23:57:31] 2025-11-28 04:57:04,985 | INFO     | mean x: 1764291496.5
[2025-11-27 23:57:31] 2025-11-28 04:57:04,985 | INFO     | mean y: 2259857.145652174
[2025-11-27 23:57:31] 2025-11-28 04:57:04,985 | INFO     | intersect: -13950662037.420763
[2025-11-27 23:57:31] 2025-11-28 04:57:04,985 | INFO     | chi2: 1.2862013355283695
[2025-11-27 23:57:31] 2025-11-28 04:57:04,985 | INFO     | current chi2=1.2862013355283695 (change=51.12286211877161 %)
[2025-11-27 23:57:31] 2025-11-28 04:57:04,986 | INFO     | sum of square deviations: 29208584860.0
[2025-11-27 23:57:31] 2025-11-28 04:57:04,988 | INFO     | sum of deviations: 233887140864.0
[2025-11-27 23:57:31] 2025-11-28 04:57:04,988 | INFO     | mean x: 1764291344.0
[2025-11-27 23:57:31] 2025-11-28 04:57:04,988 | INFO     | mean y: 2259103.9098901097
[2025-11-27 23:57:31] 2025-11-28 04:57:04,988 | INFO     | intersect: -14125267446.14783
[2025-11-27 23:57:31] 2025-11-28 04:57:04,988 | INFO     | chi2: 1.2853730533264645
[2025-11-27 23:57:31] 2025-11-28 04:57:04,988 | INFO     | current chi2=1.2853730533264645 (change=0.06439755417955224 %)
[2025-11-27 23:57:31] 2025-11-28 04:57:04,988 | INFO     | right removable region: 454
[2025-11-27 23:57:31] 2025-11-28 04:57:04,989 | INFO     | sum of square deviations: 30182128695.0
[2025-11-27 23:57:31] 2025-11-28 04:57:04,991 | INFO     | sum of deviations: 123419670415.5
[2025-11-27 23:57:31] 2025-11-28 04:57:04,992 | INFO     | mean x: 1764291801.5
[2025-11-27 23:57:31] 2025-11-28 04:57:04,992 | INFO     | mean y: 2259759.710869565
[2025-11-27 23:57:31] 2025-11-28 04:57:04,992 | INFO     | intersect: -7212218544.928099
[2025-11-27 23:57:31] 2025-11-28 04:57:04,992 | INFO     | chi2: 1.4031158547056966
[2025-11-27 23:57:31] 2025-11-28 04:57:04,992 | INFO     | current chi2=1.4031158547056966 (change=46.67997521117852 %)
[2025-11-27 23:57:31] 2025-11-28 04:57:04,992 | INFO     | sum of square deviations: 29208584860.0
[2025-11-27 23:57:31] 2025-11-28 04:57:04,995 | INFO     | sum of deviations: 113865572957.0
[2025-11-27 23:57:31] 2025-11-28 04:57:04,995 | INFO     | mean x: 1764291954.0
[2025-11-27 23:57:31] 2025-11-28 04:57:04,995 | INFO     | mean y: 2261255.6065934068
[2025-11-27 23:57:31] 2025-11-28 04:57:04,995 | INFO     | intersect: -6875583568.73301
[2025-11-27 23:57:31] 2025-11-28 04:57:04,995 | INFO     | chi2: 1.3983715901264424
[2025-11-27 23:57:31] 2025-11-28 04:57:04,995 | INFO     | current chi2=1.3983715901264424 (change=0.33812351013945685 %)
[2025-11-27 23:57:31] 2025-11-28 04:57:04,995 | INFO     | left removable region: 20
[2025-11-27 23:57:31] 2025-11-28 04:57:04,996 | INFO     | sum of square deviations: 25348093872.5
[2025-11-27 23:57:31] 2025-11-28 04:57:04,998 | INFO     | sum of deviations: 146994773332.5
[2025-11-27 23:57:31] 2025-11-28 04:57:04,998 | INFO     | mean x: 1764291923.5
[2025-11-27 23:57:31] 2025-11-28 04:57:04,998 | INFO     | mean y: 2272942.0023041475
[2025-11-27 23:57:31] 2025-11-28 04:57:04,998 | INFO     | intersect: -10228937842.197971
[2025-11-27 23:57:31] 2025-11-28 04:57:04,998 | INFO     | chi2: 0.03296660853655701
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | current memory leak: 5.80 B/s (using 434 data points, chi2=0.03)
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | could have reported an average CPU frequency of 4629 MHz (19 samples)
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | ..............................
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | . Timing measurements:
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | . get job = 0 s
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | . initial setup = 2 s
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | . payload setup = 3 s
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | . stage-in = 0 s
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | . payload execution = 28319 s
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | . stage-out = 2 s
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | . log creation = 0 s
[2025-11-27 23:57:31] 2025-11-28 04:57:04,999 | INFO     | ..............................
[2025-11-27 23:57:31] 2025-11-28 04:57:05,045 | INFO     | 
[2025-11-27 23:57:31] 2025-11-28 04:57:05,045 | INFO     | job summary report
[2025-11-27 23:57:31] 2025-11-28 04:57:05,045 | INFO     | --------------------------------------------------
[2025-11-27 23:57:31] 2025-11-28 04:57:05,045 | INFO     | PanDA job id: 6896577550
[2025-11-27 23:57:31] 2025-11-28 04:57:05,045 | INFO     | task id: 47556161
[2025-11-27 23:57:31] 2025-11-28 04:57:05,045 | INFO     | errors: (none)
[2025-11-27 23:57:31] 2025-11-28 04:57:05,045 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | pilot state: finished 
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | transexitcode: 0
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | exeerrorcode: 0
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | exeerrordiag: 
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | exitcode: 0
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | exitmsg: OK
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | cpuconsumptiontime: 111516 s
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | nevents: 1000
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | neventsw: 0
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | pid: 4059756
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | pgrp: 4059756
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | corecount: 4
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | event service: False
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | sizes: {0: 2284212, 3: 2284474, 11: 2284502, 28326: 2323074, 28327: 2323073, 28329: 2332321, 28335: 2332511}
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | --------------------------------------------------
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | 
[2025-11-27 23:57:31] 2025-11-28 04:57:05,046 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-11-27 23:57:31] 2025-11-28 04:57:05,059 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,059 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | job 6896577550 has completed (purged errors)
[2025-11-27 23:57:31] 2025-11-28 04:57:05,060 | INFO     | overall cleanup function is called
[2025-11-27 23:57:31] 2025-11-28 04:57:06,011 | INFO     | PID=4052219 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 23:57:31] 2025-11-28 04:57:06,011 | INFO     | .. there are 8 such processes running
[2025-11-27 23:57:31] 2025-11-28 04:57:06,068 | INFO     | --- collectZombieJob: --- 10, [4059756]
[2025-11-27 23:57:31] 2025-11-28 04:57:06,068 | INFO     | zombie collector waiting for pid 4059756
[2025-11-27 23:57:31] 2025-11-28 04:57:06,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:57:31] 2025-11-28 04:57:06,068 | INFO     | collected zombie processes
[2025-11-27 23:57:31] 2025-11-28 04:57:06,068 | INFO     | will attempt to kill all subprocesses of pid=4059756
[2025-11-27 23:57:31] 2025-11-28 04:57:06,158 | INFO     | process IDs to be killed: [4059756] (in reverse order)
[2025-11-27 23:57:31] 2025-11-28 04:57:06,200 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:57:31] 2025-11-28 04:57:06,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:57:31] 2025-11-28 04:57:06,203 | INFO     | did not find any defunct processes belonging to 4059756
[2025-11-27 23:57:31] 2025-11-28 04:57:06,206 | INFO     | did not find any defunct processes belonging to 4059756
[2025-11-27 23:57:31] 2025-11-28 04:57:06,207 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:57:31] 2025-11-28 04:57:06,207 | INFO     | ready for new job
[2025-11-27 23:57:31] 2025-11-28 04:57:06,207 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:57:31] 2025-11-28 04:57:06,209 | INFO     | ***************************************
[2025-11-27 23:57:31] 2025-11-28 04:57:06,209 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:57:31] 2025-11-28 04:57:06,209 | INFO     | ***************************************
[2025-11-27 23:57:31] 2025-11-28 04:57:06,209 | INFO     | 
[2025-11-27 23:57:31] 2025-11-28 04:57:06,210 | INFO     | architecture information:
[2025-11-27 23:57:31] 2025-11-28 04:57:06,210 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:57:31] 2025-11-28 04:57:06,222 | INFO     | cat /etc/os-release:
[2025-11-27 23:57:31] NAME="CentOS Linux"
[2025-11-27 23:57:31] VERSION="7 (Core)"
[2025-11-27 23:57:31] ID="centos"
[2025-11-27 23:57:31] ID_LIKE="rhel fedora"
[2025-11-27 23:57:31] VERSION_ID="7"
[2025-11-27 23:57:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:57:31] ANSI_COLOR="0;31"
[2025-11-27 23:57:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:57:31] HOME_URL="https://www.centos.org/"
[2025-11-27 23:57:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:57:31] 
[2025-11-27 23:57:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:57:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:57:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:57:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:57:31] 
[2025-11-27 23:57:31] 2025-11-28 04:57:06,222 | INFO     | ***************************************
[2025-11-27 23:57:31] 2025-11-28 04:57:06,725 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-11-27 23:57:31] 2025-11-28 04:57:06,740 | INFO     | sufficient remaining disk space (873954541568 B)
[2025-11-27 23:57:31] 2025-11-28 04:57:06,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:57:31] 2025-11-28 04:57:06,740 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:57:31] 2025-11-28 04:57:06,740 | INFO     | update_server=False
[2025-11-27 23:57:31] 2025-11-28 04:57:06,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:57:31] 2025-11-28 04:57:06,740 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 23:57:31] 2025-11-28 04:57:06,740 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:57:31] 2025-11-28 04:57:06,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:57:31] 2025-11-28 04:57:06,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:57:31] 2025-11-28 04:57:06,741 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:57:31] 2025-11-28 04:57:06,953 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:57:31] 2025-11-28 04:57:06,953 | INFO     | aborting loop
[2025-11-27 23:57:31] 2025-11-28 04:57:06,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:57:31] 2025-11-28 04:57:07,076 | INFO     | all job control threads have been joined
[2025-11-27 23:57:31] 2025-11-28 04:57:07,250 | INFO     | all data control threads have been joined
[2025-11-27 23:57:31] 2025-11-28 04:57:07,380 | INFO     | all payload control threads have been joined
[2025-11-27 23:57:31] 2025-11-28 04:57:07,745 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:07,746 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:07,923 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:07,955 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:07,956 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:08,080 | INFO     | [job] control thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:08,177 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:08,255 | INFO     | [data] control thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:08,386 | INFO     | [payload] control thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:08,491 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:08,766 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:08,971 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:08,973 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:09,058 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:09,181 | INFO     | [job] validate thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:09,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:57:31] 2025-11-28 04:57:13,525 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:57:31] 2025-11-28 04:57:24,033 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:57:31] 2025-11-28 04:57:26,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137999763642176)>', '<ExcThread(monitor, started 137999278913280)>']
[2025-11-27 23:57:31] 2025-11-28 04:57:26,833 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:57:31] 2025-11-28 04:57:26,833 | INFO     | [monitor] control thread has ended
[2025-11-27 23:57:31] 2025-11-28 04:57:31,060 | INFO     | all workflow threads have been joined
[2025-11-27 23:57:31] 2025-11-28 04:57:31,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:57:31] 2025-11-28 04:57:31,061 | INFO     | traces error code: 0
[2025-11-27 23:57:31] 2025-11-28 04:57:31,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:57:31] 2025-11-28 04:57:31,126 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:57:31] 2025-11-28 04:57:31,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:57:31] 2025-11-28 04:57:31,129 [wrapper] pilotpid: 4052219
[2025-11-27 23:57:31] 2025-11-28 04:57:31,131 [wrapper] Pilot exit status: 0
[2025-11-27 23:57:31] 2025-11-28 04:57:31,136 [wrapper] pandaids: 6896577550
[2025-11-27 23:57:31] 2025-11-28 04:57:31,164 [wrapper] cleanup supervisor_pilot  300997 4052220
[2025-11-27 23:57:31] 2025-11-28 04:57:31,165 [wrapper] Test setup, not cleaning
[2025-11-27 23:57:31] 2025-11-28 04:57:31,167 [wrapper] apfmon messages muted
[2025-11-27 23:57:31] 2025-11-28 04:57:31,169 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:57:31] 2025-11-28 04:57:31,170 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:57:31]  *** Error codes and diagnostics ***
[2025-11-27 23:57:31]     "exeErrorCode": 0,
[2025-11-27 23:57:31]     "exeErrorDiag": "",
[2025-11-27 23:57:31]     "pilotErrorCode": 0,
[2025-11-27 23:57:31]     "pilotErrorDiag": "",
[2025-11-27 23:57:31]  *** Listing of results directory ***
[2025-11-27 23:57:31] total 1326800
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc      5112 Nov 25 00:11 queuedata.json
[2025-11-27 23:57:31] -rwx------ 1 boinc boinc     36292 Nov 25 00:12 runpilot2-wrapper.sh
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc       100 Nov 27 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:57:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 16:04 run_atlas
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc       105 Nov 27 16:04 job.xml
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc      9846 Nov 27 16:04 init_data.xml
[2025-11-27 23:57:31] -rw-r--r-- 2 boinc boinc 409281486 Nov 27 16:04 EVNT.47483658._002095.pool.root.1
[2025-11-27 23:57:31] -rw-r--r-- 2 boinc boinc     15847 Nov 27 16:04 start_atlas.sh
[2025-11-27 23:57:31] drwxrwx--x 2 boinc boinc      4096 Nov 27 16:04 shared
[2025-11-27 23:57:31] -rw-r--r-- 2 boinc boinc    590101 Nov 27 16:04 input.tar.gz
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc         0 Nov 27 16:04 boinc_lockfile
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc      2780 Nov 27 16:04 pandaJob.out
[2025-11-27 23:57:31] -rw------- 1 boinc boinc    991500 Nov 27 16:04 agis_schedconf.cvmfs.json
[2025-11-27 23:57:31] drwx------ 5 boinc boinc      4096 Nov 27 16:04 pilot3
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc       532 Nov 27 23:53 boinc_task_state.xml
[2025-11-27 23:57:31] -rw------- 1 boinc boinc 934727040 Nov 27 23:56 HITS.47556161._000781.pool.root.1
[2025-11-27 23:57:31] -rw------- 1 boinc boinc      1031 Nov 27 23:56 memory_monitor_summary.json
[2025-11-27 23:57:31] -rw------- 1 boinc boinc        95 Nov 27 23:56 pilot_heartbeat.json
[2025-11-27 23:57:31] -rw------- 1 boinc boinc   1516240 Nov 27 23:56 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:57:31] -rw------- 1 boinc boinc   1284829 Nov 27 23:56 log.47556161._000781.job.log.tgz.1
[2025-11-27 23:57:31] -rw------- 1 boinc boinc      8548 Nov 27 23:57 heartbeat.json
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc      8192 Nov 27 23:57 boinc_mmap_file
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc        29 Nov 27 23:57 wrapper_checkpoint.txt
[2025-11-27 23:57:31] -rw------- 1 boinc boinc      4560 Nov 27 23:57 pilotlog.txt
[2025-11-27 23:57:31] -rw------- 1 boinc boinc   4069837 Nov 27 23:57 log.47556161._000781.job.log.1
[2025-11-27 23:57:31] -rw------- 1 boinc boinc       353 Nov 27 23:57 output.list
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc       620 Nov 27 23:57 runtime_log
[2025-11-27 23:57:31] -rw------- 1 boinc boinc   5376000 Nov 27 23:57 result.tar.gz
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc      8898 Nov 27 23:57 runtime_log.err
[2025-11-27 23:57:31] -rw------- 1 boinc boinc       651 Nov 27 23:57 GVCMDmhW0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmp8LKDmXdHcyn.diag
[2025-11-27 23:57:31] -rw-r--r-- 1 boinc boinc     21346 Nov 27 23:57 stderr.txt
[2025-11-27 23:57:31] HITS file was successfully produced:
[2025-11-27 23:57:31] -rw------- 1 boinc boinc 934727040 Nov 27 23:56 shared/HITS.pool.root.1
[2025-11-27 23:57:31]  *** Contents of shared directory: ***
[2025-11-27 23:57:31] total 1318368
[2025-11-27 23:57:31] -rw-r--r-- 2 boinc boinc 409281486 Nov 27 16:04 ATLAS.root_0
[2025-11-27 23:57:31] -rw-r--r-- 2 boinc boinc     15847 Nov 27 16:04 start_atlas.sh
[2025-11-27 23:57:31] -rw-r--r-- 2 boinc boinc    590101 Nov 27 16:04 input.tar.gz
[2025-11-27 23:57:31] -rw------- 1 boinc boinc 934727040 Nov 27 23:56 HITS.pool.root.1
[2025-11-27 23:57:31] -rw------- 1 boinc boinc   5376000 Nov 27 23:57 result.tar.gz
23:57:32 (4048365): run_atlas exited; CPU time 111496.337897
23:57:32 (4048365): called boinc_finish(0)

</stderr_txt>
]]>

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