Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
08:20:33 (800495): wrapper (7.7.26015): starting
08:20:33 (800495): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 08:20:33] Arguments: --nthreads 4
[2025-11-26 08:20:33] Threads: 4
[2025-11-26 08:20:33] Checking for CVMFS
[2025-11-26 08:20:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:20:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:20:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:20:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:20:34] 2.13.2.0 774864 4360 59060 153325 1 81 3068478 4096001 5100 130560 0 12778748 99.953 570191 1322 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 08:20:34] CVMFS is ok
[2025-11-26 08:20:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:20:34] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 08:20:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 08:20:34] Further information can be found at the LHC@home message board.
[2025-11-26 08:20:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:20:34] Checking for apptainer binary...
[2025-11-26 08:20:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:20:34] Running /usr/bin/apptainer --version
[2025-11-26 08:20:34] apptainer version 1.4.3
[2025-11-26 08:20:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:20:34] msi670e
[2025-11-26 08:20:34] apptainer works
[2025-11-26 08:20:34] Set ATHENA_PROC_NUMBER=4
[2025-11-26 08:20:34] Set ATHENA_CORE_NUMBER=4
[2025-11-26 08:20:34] Starting ATLAS job with PandaID=6896450842
[2025-11-26 08:20:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 14:55:41]  *** The last 200 lines of the pilot log: ***
[2025-11-26 14:55:41] 2025-11-26 21:55:08,311 | INFO     | time since job start (23668s) is within the limit (172800.0s)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,594 | INFO     | monitor loop #1795: job 0:6896450842 is in state 'finished'
[2025-11-26 14:55:41] 2025-11-26 21:55:08,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,760 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 14:55:41] 2025-11-26 21:55:08,763 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4833.247437500001
[2025-11-26 14:55:41] 2025-11-26 21:55:08,765 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6896450842/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,766 | INFO     | extracted standard info from prmon json
[2025-11-26 14:55:41] 2025-11-26 21:55:08,766 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 14:55:41] 2025-11-26 21:55:08,766 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 14:55:41] 2025-11-26 21:55:08,768 | INFO     | fitting pss+swap vs Time
[2025-11-26 14:55:41] 2025-11-26 21:55:08,769 | INFO     | sum of square deviations: 18112179597.0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,770 | INFO     | sum of deviations: 98655780771.50002
[2025-11-26 14:55:41] 2025-11-26 21:55:08,770 | INFO     | mean x: 1764182262.5
[2025-11-26 14:55:41] 2025-11-26 21:55:08,770 | INFO     | mean y: 2258173.399484536
[2025-11-26 14:55:41] 2025-11-26 21:55:08,770 | INFO     | intersect: -9607119737.086618
[2025-11-26 14:55:41] 2025-11-26 21:55:08,771 | INFO     | chi2: 2.5188560638231507
[2025-11-26 14:55:41] 2025-11-26 21:55:08,771 | INFO     | sum of square deviations: 17420948032.0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,772 | INFO     | sum of deviations: 138077026898.0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,772 | INFO     | mean x: 1764182110.0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,772 | INFO     | mean y: 2266810.276762402
[2025-11-26 14:55:41] 2025-11-26 21:55:08,772 | INFO     | intersect: -13980498089.084164
[2025-11-26 14:55:41] 2025-11-26 21:55:08,773 | INFO     | chi2: 1.580869365165786
[2025-11-26 14:55:41] 2025-11-26 21:55:08,773 | INFO     | current chi2=1.580869365165786 (change=37.23859858961838 %)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,773 | INFO     | sum of square deviations: 16747530754.5
[2025-11-26 14:55:41] 2025-11-26 21:55:08,774 | INFO     | sum of deviations: 134733625102.50003
[2025-11-26 14:55:41] 2025-11-26 21:55:08,774 | INFO     | mean x: 1764181957.5
[2025-11-26 14:55:41] 2025-11-26 21:55:08,774 | INFO     | mean y: 2266053.261904762
[2025-11-26 14:55:41] 2025-11-26 21:55:08,774 | INFO     | intersect: -14190550425.70064
[2025-11-26 14:55:41] 2025-11-26 21:55:08,775 | INFO     | chi2: 1.580898948532862
[2025-11-26 14:55:41] 2025-11-26 21:55:08,775 | INFO     | current chi2=1.580898948532862 (change=-0.0018713353378780615 %)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,775 | INFO     | right removable region: 377
[2025-11-26 14:55:41] 2025-11-26 21:55:08,775 | INFO     | sum of square deviations: 17420948032.0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,776 | INFO     | sum of deviations: 39444155621.99996
[2025-11-26 14:55:41] 2025-11-26 21:55:08,776 | INFO     | mean x: 1764182415.0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,776 | INFO     | mean y: 2271166.18537859
[2025-11-26 14:55:41] 2025-11-26 21:55:08,776 | INFO     | intersect: -3992154716.6675
[2025-11-26 14:55:41] 2025-11-26 21:55:08,777 | INFO     | chi2: 0.9712703873851702
[2025-11-26 14:55:41] 2025-11-26 21:55:08,777 | INFO     | current chi2=0.9712703873851702 (change=61.44002028004078 %)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,777 | INFO     | sum of square deviations: 16747530754.5
[2025-11-26 14:55:41] 2025-11-26 21:55:08,778 | INFO     | sum of deviations: 33055402270.49998
[2025-11-26 14:55:41] 2025-11-26 21:55:08,778 | INFO     | mean x: 1764182567.5
[2025-11-26 14:55:41] 2025-11-26 21:55:08,778 | INFO     | mean y: 2272611.3306878307
[2025-11-26 14:55:41] 2025-11-26 21:55:08,779 | INFO     | intersect: -3479778880.4479885
[2025-11-26 14:55:41] 2025-11-26 21:55:08,779 | INFO     | chi2: 0.9655506943737906
[2025-11-26 14:55:41] 2025-11-26 21:55:08,779 | INFO     | current chi2=0.9655506943737906 (change=0.588887820082527 %)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,779 | INFO     | left removable region: 20
[2025-11-26 14:55:41] 2025-11-26 21:55:08,779 | INFO     | sum of square deviations: 14108461738.0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,780 | INFO     | sum of deviations: 61393827223.99999
[2025-11-26 14:55:41] 2025-11-26 21:55:08,780 | INFO     | mean x: 1764182537.0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,780 | INFO     | mean y: 2282986.098039216
[2025-11-26 14:55:41] 2025-11-26 21:55:08,780 | INFO     | intersect: -7674664357.952373
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | chi2: 0.016918940505588856
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | current memory leak: 4.35 B/s (using 357 data points, chi2=0.02)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | could have reported an average CPU frequency of 4946 MHz (17 samples)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | ..............................
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | . Timing measurements:
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | . get job = 0 s
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | . initial setup = 2 s
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | . payload setup = 2 s
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | . stage-in = 0 s
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | . payload execution = 23636 s
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | . stage-out = 6 s
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | . log creation = 0 s
[2025-11-26 14:55:41] 2025-11-26 21:55:08,781 | INFO     | ..............................
[2025-11-26 14:55:41] 2025-11-26 21:55:08,820 | INFO     | 
[2025-11-26 14:55:41] 2025-11-26 21:55:08,820 | INFO     | job summary report
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | --------------------------------------------------
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | PanDA job id: 6896450842
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | task id: 47556149
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | errors: (none)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | pilot state: finished 
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | transexitcode: 0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | exeerrorcode: 0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | exeerrordiag: 
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | exitcode: 0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | exitmsg: OK
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | cpuconsumptiontime: 93682 s
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | nevents: 1000
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | neventsw: 0
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | pid: 811018
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | pgrp: 811018
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | corecount: 4
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | event service: False
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | sizes: {0: 2284322, 3: 2284584, 11: 2284612, 23643: 2320766, 23651: 2329830, 23655: 2330084}
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | --------------------------------------------------
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | 
[2025-11-26 14:55:41] 2025-11-26 21:55:08,821 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-26 14:55:41] 2025-11-26 21:55:08,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | job 6896450842 has completed (purged errors)
[2025-11-26 14:55:41] 2025-11-26 21:55:08,834 | INFO     | overall cleanup function is called
[2025-11-26 14:55:41] 2025-11-26 21:55:09,844 | INFO     | --- collectZombieJob: --- 10, [811018]
[2025-11-26 14:55:41] 2025-11-26 21:55:09,844 | INFO     | zombie collector waiting for pid 811018
[2025-11-26 14:55:41] 2025-11-26 21:55:09,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 14:55:41] 2025-11-26 21:55:09,844 | INFO     | collected zombie processes
[2025-11-26 14:55:41] 2025-11-26 21:55:09,844 | INFO     | will attempt to kill all subprocesses of pid=811018
[2025-11-26 14:55:41] 2025-11-26 21:55:09,931 | INFO     | process IDs to be killed: [811018] (in reverse order)
[2025-11-26 14:55:41] 2025-11-26 21:55:09,970 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 14:55:41] 2025-11-26 21:55:09,970 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 14:55:41] 2025-11-26 21:55:09,973 | INFO     | did not find any defunct processes belonging to 811018
[2025-11-26 14:55:41] 2025-11-26 21:55:09,976 | INFO     | did not find any defunct processes belonging to 811018
[2025-11-26 14:55:41] 2025-11-26 21:55:09,976 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 14:55:41] 2025-11-26 21:55:09,976 | INFO     | ready for new job
[2025-11-26 14:55:41] 2025-11-26 21:55:09,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 14:55:41] 2025-11-26 21:55:09,978 | INFO     | ***************************************
[2025-11-26 14:55:41] 2025-11-26 21:55:09,978 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 14:55:41] 2025-11-26 21:55:09,978 | INFO     | ***************************************
[2025-11-26 14:55:41] 2025-11-26 21:55:09,978 | INFO     | 
[2025-11-26 14:55:41] 2025-11-26 21:55:09,979 | INFO     | architecture information:
[2025-11-26 14:55:41] 2025-11-26 21:55:09,979 | INFO     | executing command: cat /etc/os-release
[2025-11-26 14:55:41] 2025-11-26 21:55:09,988 | INFO     | cat /etc/os-release:
[2025-11-26 14:55:41] NAME="CentOS Linux"
[2025-11-26 14:55:41] VERSION="7 (Core)"
[2025-11-26 14:55:41] ID="centos"
[2025-11-26 14:55:41] ID_LIKE="rhel fedora"
[2025-11-26 14:55:41] VERSION_ID="7"
[2025-11-26 14:55:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 14:55:41] ANSI_COLOR="0;31"
[2025-11-26 14:55:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 14:55:41] HOME_URL="https://www.centos.org/"
[2025-11-26 14:55:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 14:55:41] 
[2025-11-26 14:55:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 14:55:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 14:55:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 14:55:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 14:55:41] 
[2025-11-26 14:55:41] 2025-11-26 21:55:09,988 | INFO     | ***************************************
[2025-11-26 14:55:41] 2025-11-26 21:55:10,491 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-26 14:55:41] 2025-11-26 21:55:10,502 | INFO     | sufficient remaining disk space (437618999296 B)
[2025-11-26 14:55:41] 2025-11-26 21:55:10,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 14:55:41] 2025-11-26 21:55:10,502 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 14:55:41] 2025-11-26 21:55:10,502 | INFO     | update_server=False
[2025-11-26 14:55:41] 2025-11-26 21:55:10,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 14:55:41] 2025-11-26 21:55:10,502 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:55:41] 2025-11-26 21:55:10,503 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 14:55:41] 2025-11-26 21:55:10,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:55:41] 2025-11-26 21:55:10,503 | INFO     | aborting loop
[2025-11-26 14:55:41] 2025-11-26 21:55:10,919 | INFO     | all data control threads have been joined
[2025-11-26 14:55:41] 2025-11-26 21:55:10,989 | INFO     | all payload control threads have been joined
[2025-11-26 14:55:41] 2025-11-26 21:55:11,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 14:55:41] 2025-11-26 21:55:11,507 | INFO     | [job] retrieve thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:11,507 | INFO     | [job] queue monitor thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:11,508 | INFO     | [job] job monitor thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:11,852 | INFO     | [payload] validate_post thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:11,924 | INFO     | [data] control thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:11,978 | INFO     | [payload] failed_post thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:11,994 | INFO     | [payload] control thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:12,069 | INFO     | all job control threads have been joined
[2025-11-26 14:55:41] 2025-11-26 21:55:12,115 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:12,156 | INFO     | [job] validate thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:12,267 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:12,400 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:12,508 | INFO     | [data] copytool_out thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:12,523 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:12,968 | INFO     | [data] copytool_in thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:13,074 | INFO     | [job] control thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:15,211 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 14:55:41] 2025-11-26 21:55:19,013 | INFO     | [monitor] cgroup control has ended
[2025-11-26 14:55:41] 2025-11-26 21:55:19,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124552274761536)>', '<ExcThread(monitor, started 124551568553728)>']
[2025-11-26 14:55:41] 2025-11-26 21:55:24,784 | INFO     | all workflow threads have been joined
[2025-11-26 14:55:41] 2025-11-26 21:55:24,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 14:55:41] 2025-11-26 21:55:24,784 | INFO     | traces error code: 0
[2025-11-26 14:55:41] 2025-11-26 21:55:24,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 14:55:41] 2025-11-26 21:55:41,464 | INFO     | PID=804351 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 14:55:41] 2025-11-26 21:55:41,464 | INFO     | .. there are 7 such processes running
[2025-11-26 14:55:41] 2025-11-26 21:55:41,465 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 14:55:41] 2025-11-26 21:55:41,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 14:55:41] 2025-11-26 21:55:41,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 14:55:41] 2025-11-26 21:55:41,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 14:55:41] 2025-11-26 21:55:41,465 | INFO     | [monitor] control thread has ended
[2025-11-26 14:55:41] 2025-11-26 21:55:41,521 [wrapper] ==== pilot stdout END ====
[2025-11-26 14:55:41] 2025-11-26 21:55:41,522 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 14:55:41] 2025-11-26 21:55:41,524 [wrapper] pilotpid: 804351
[2025-11-26 14:55:41] 2025-11-26 21:55:41,525 [wrapper] Pilot exit status: 0
[2025-11-26 14:55:41] 2025-11-26 21:55:41,531 [wrapper] pandaids: 6896450842
[2025-11-26 14:55:41] 2025-11-26 21:55:41,555 [wrapper] cleanup supervisor_pilot 1169568 804352
[2025-11-26 14:55:41] 2025-11-26 21:55:41,556 [wrapper] Test setup, not cleaning
[2025-11-26 14:55:41] 2025-11-26 21:55:41,558 [wrapper] apfmon messages muted
[2025-11-26 14:55:41] 2025-11-26 21:55:41,559 [wrapper] ==== wrapper stdout END ====
[2025-11-26 14:55:41] 2025-11-26 21:55:41,561 [wrapper] ==== wrapper stderr END ====
[2025-11-26 14:55:41]  *** Error codes and diagnostics ***
[2025-11-26 14:55:41]     "exeErrorCode": 0,
[2025-11-26 14:55:41]     "exeErrorDiag": "",
[2025-11-26 14:55:41]     "pilotErrorCode": 0,
[2025-11-26 14:55:41]     "pilotErrorDiag": "",
[2025-11-26 14:55:41]  *** Listing of results directory ***
[2025-11-26 14:55:41] total 1302748
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc    576529 Nov 24 20:04 pilot3.tar.gz
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc      5112 Nov 24 21:02 queuedata.json
[2025-11-26 14:55:41] -rwx------ 1 boinc boinc     36292 Nov 24 21:04 runpilot2-wrapper.sh
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc       100 Nov 26 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 14:55:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 08:20 run_atlas
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc       105 Nov 26 08:20 job.xml
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc      9948 Nov 26 08:20 init_data.xml
[2025-11-26 14:55:41] -rw-r--r-- 2 boinc boinc 408476508 Nov 26 08:20 EVNT.47483658._001500.pool.root.1
[2025-11-26 14:55:41] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:20 start_atlas.sh
[2025-11-26 14:55:41] drwxrwx--x 2 boinc boinc      4096 Nov 26 08:20 shared
[2025-11-26 14:55:41] -rw-r--r-- 2 boinc boinc    590105 Nov 26 08:20 input.tar.gz
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc         0 Nov 26 08:20 boinc_lockfile
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc      2786 Nov 26 08:20 pandaJob.out
[2025-11-26 14:55:41] -rw------- 1 boinc boinc    992360 Nov 26 08:20 agis_schedconf.cvmfs.json
[2025-11-26 14:55:41] drwx------ 5 boinc boinc      4096 Nov 26 08:20 pilot3
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc       531 Nov 26 14:51 boinc_task_state.xml
[2025-11-26 14:55:41] -rw------- 1 boinc boinc 912294364 Nov 26 14:54 HITS.47556149._004868.pool.root.1
[2025-11-26 14:55:41] -rw------- 1 boinc boinc      1031 Nov 26 14:54 memory_monitor_summary.json
[2025-11-26 14:55:41] -rw------- 1 boinc boinc   1516240 Nov 26 14:55 agis_ddmendpoints.agis.ALL.json
[2025-11-26 14:55:41] -rw------- 1 boinc boinc   1231149 Nov 26 14:55 log.47556149._004868.job.log.tgz.1
[2025-11-26 14:55:41] -rw------- 1 boinc boinc      8550 Nov 26 14:55 heartbeat.json
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc        28 Nov 26 14:55 wrapper_checkpoint.txt
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc      8192 Nov 26 14:55 boinc_mmap_file
[2025-11-26 14:55:41] -rw------- 1 boinc boinc       821 Nov 26 14:55 pilotlog.txt
[2025-11-26 14:55:41] -rw------- 1 boinc boinc        95 Nov 26 14:55 pilot_heartbeat.json
[2025-11-26 14:55:41] -rw------- 1 boinc boinc   3431768 Nov 26 14:55 log.47556149._004868.job.log.1
[2025-11-26 14:55:41] -rw------- 1 boinc boinc       353 Nov 26 14:55 output.list
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc       620 Nov 26 14:55 runtime_log
[2025-11-26 14:55:41] -rw------- 1 boinc boinc   4679680 Nov 26 14:55 result.tar.gz
[2025-11-26 14:55:41] -rw------- 1 boinc boinc       660 Nov 26 14:55 y9BNDmYTzh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmW6LKDm1YSsym.diag
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc      8920 Nov 26 14:55 runtime_log.err
[2025-11-26 14:55:41] -rw-r--r-- 1 boinc boinc     21308 Nov 26 14:55 stderr.txt
[2025-11-26 14:55:41] HITS file was successfully produced:
[2025-11-26 14:55:41] -rw------- 1 boinc boinc 912294364 Nov 26 14:54 shared/HITS.pool.root.1
[2025-11-26 14:55:41]  *** Contents of shared directory: ***
[2025-11-26 14:55:41] total 1294996
[2025-11-26 14:55:41] -rw-r--r-- 2 boinc boinc 408476508 Nov 26 08:20 ATLAS.root_0
[2025-11-26 14:55:41] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:20 start_atlas.sh
[2025-11-26 14:55:41] -rw-r--r-- 2 boinc boinc    590105 Nov 26 08:20 input.tar.gz
[2025-11-26 14:55:41] -rw------- 1 boinc boinc 912294364 Nov 26 14:54 HITS.pool.root.1
[2025-11-26 14:55:41] -rw------- 1 boinc boinc   4679680 Nov 26 14:55 result.tar.gz
14:55:42 (800495): run_atlas exited; CPU time 93645.800747
14:55:42 (800495): called boinc_finish(0)

</stderr_txt>
]]>

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