Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:30:24 (24779): wrapper (7.7.26015): starting
08:30:24 (24779): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 08:30:24] Arguments: --nthreads 8
[2025-11-26 08:30:24] Threads: 8
[2025-11-26 08:30:24] Checking for CVMFS
[2025-11-26 08:30:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:30:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:30:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:30:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:30:24] 2.11.2.0 16446 117726 136764 153323 0 82 16476993 18432001 1885 130560 0 84659002 99.974 4883104 30234 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 08:30:24] CVMFS is ok
[2025-11-26 08:30:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:30:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:30:24] Further information can be found at the LHC@home message board.
[2025-11-26 08:30:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:30:24] Checking for apptainer binary...
[2025-11-26 08:30:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:30:24] Running /usr/bin/apptainer --version
[2025-11-26 08:30:24] apptainer version 1.3.2-1.el7
[2025-11-26 08:30:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:30:25] c-206-26.aglt2.org
[2025-11-26 08:30:25] apptainer works
[2025-11-26 08:30:25] Set ATHENA_PROC_NUMBER=8
[2025-11-26 08:30:25] Set ATHENA_CORE_NUMBER=8
[2025-11-26 08:30:25] Starting ATLAS job with PandaID=6896577517
[2025-11-26 08:30:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:15:41]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:15:41] 2025-11-27 09:14:52,010 | INFO     | monitor loop #5070: job 0:6896577517 is in state 'finished'
[2025-11-27 04:15:41] 2025-11-27 09:14:52,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,067 | INFO     | time since job start (71056s) is within the limit (172800.0s)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,223 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 04:15:41] 2025-11-27 09:14:53,229 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2561.125
[2025-11-27 04:15:41] 2025-11-27 09:14:53,233 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896577517/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,234 | INFO     | extracted standard info from prmon json
[2025-11-27 04:15:41] 2025-11-27 09:14:53,234 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:15:41] 2025-11-27 09:14:53,234 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:15:41] 2025-11-27 09:14:53,265 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:15:41] 2025-11-27 09:14:53,267 | INFO     | sum of square deviations: 490291348161.48975
[2025-11-27 04:15:41] 2025-11-27 09:14:53,310 | INFO     | sum of deviations: 2199853443366.935
[2025-11-27 04:15:41] 2025-11-27 09:14:53,310 | INFO     | mean x: 1764199366.616309
[2025-11-27 04:15:41] 2025-11-27 09:14:53,310 | INFO     | mean y: 2871420.845493562
[2025-11-27 04:15:41] 2025-11-27 09:14:53,311 | INFO     | intersect: -7912789473.416003
[2025-11-27 04:15:41] 2025-11-27 09:14:53,312 | INFO     | chi2: 5.563488437267354
[2025-11-27 04:15:41] 2025-11-27 09:14:53,314 | INFO     | sum of square deviations: 484005830689.583
[2025-11-27 04:15:41] 2025-11-27 09:14:53,344 | INFO     | sum of deviations: 2563759063332.2
[2025-11-27 04:15:41] 2025-11-27 09:14:53,345 | INFO     | mean x: 1764199214.1189656
[2025-11-27 04:15:41] 2025-11-27 09:14:53,345 | INFO     | mean y: 2880245.831896552
[2025-11-27 04:15:41] 2025-11-27 09:14:53,345 | INFO     | intersect: -9342010740.86751
[2025-11-27 04:15:41] 2025-11-27 09:14:53,346 | INFO     | chi2: 2.717731773216865
[2025-11-27 04:15:41] 2025-11-27 09:14:53,346 | INFO     | current chi2=2.717731773216865 (change=51.15058108125149 %)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,347 | INFO     | sum of square deviations: 477774267717.6586
[2025-11-27 04:15:41] 2025-11-27 09:14:53,371 | INFO     | sum of deviations: 2680678050949.971
[2025-11-27 04:15:41] 2025-11-27 09:14:53,371 | INFO     | mean x: 1764199061.621645
[2025-11-27 04:15:41] 2025-11-27 09:14:53,371 | INFO     | mean y: 2883103.185281385
[2025-11-27 04:15:41] 2025-11-27 09:14:53,371 | INFO     | intersect: -9895619226.350883
[2025-11-27 04:15:41] 2025-11-27 09:14:53,372 | INFO     | chi2: 2.2566439919811563
[2025-11-27 04:15:41] 2025-11-27 09:14:53,372 | INFO     | current chi2=2.2566439919811563 (change=16.965904648122738 %)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,373 | INFO     | right removable region: 1154
[2025-11-27 04:15:41] 2025-11-27 09:14:53,374 | INFO     | sum of square deviations: 484005463530.81976
[2025-11-27 04:15:41] 2025-11-27 09:14:53,403 | INFO     | sum of deviations: 1899367363581.0254
[2025-11-27 04:15:41] 2025-11-27 09:14:53,403 | INFO     | mean x: 1764199519.1181035
[2025-11-27 04:15:41] 2025-11-27 09:14:53,404 | INFO     | mean y: 2878702.722413793
[2025-11-27 04:15:41] 2025-11-27 09:14:53,404 | INFO     | intersect: -6920313785.671663
[2025-11-27 04:15:41] 2025-11-27 09:14:53,405 | INFO     | chi2: 3.5498198470403626
[2025-11-27 04:15:41] 2025-11-27 09:14:53,406 | INFO     | current chi2=3.5498198470403626 (change=36.19435203169138 %)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,407 | INFO     | sum of square deviations: 477773675286.61755
[2025-11-27 04:15:41] 2025-11-27 09:14:53,442 | INFO     | sum of deviations: 1824745276150.129
[2025-11-27 04:15:41] 2025-11-27 09:14:53,442 | INFO     | mean x: 1764199671.6181817
[2025-11-27 04:15:41] 2025-11-27 09:14:53,442 | INFO     | mean y: 2880528.3653679653
[2025-11-27 04:15:41] 2025-11-27 09:14:53,442 | INFO     | intersect: -6735069223.762919
[2025-11-27 04:15:41] 2025-11-27 09:14:53,444 | INFO     | chi2: 3.5005144667323327
[2025-11-27 04:15:41] 2025-11-27 09:14:53,444 | INFO     | current chi2=3.5005144667323327 (change=1.3889544380438885 %)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,444 | INFO     | left removable region: 20
[2025-11-27 04:15:41] 2025-11-27 09:14:53,446 | INFO     | sum of square deviations: 452184727665.962
[2025-11-27 04:15:41] 2025-11-27 09:14:53,481 | INFO     | sum of deviations: 2222764240863.982
[2025-11-27 04:15:41] 2025-11-27 09:14:53,481 | INFO     | mean x: 1764199641.122575
[2025-11-27 04:15:41] 2025-11-27 09:14:53,482 | INFO     | mean y: 2894872.4029982365
[2025-11-27 04:15:41] 2025-11-27 09:14:53,482 | INFO     | intersect: -8669224365.841482
[2025-11-27 04:15:41] 2025-11-27 09:14:53,483 | INFO     | chi2: 0.15169097197327816
[2025-11-27 04:15:41] 2025-11-27 09:14:53,484 | INFO     | current memory leak: 4.92 B/s (using 1134 data points, chi2=0.15)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,485 | INFO     | could have reported an average CPU frequency of 2623 MHz (42 samples)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,485 | INFO     | ..............................
[2025-11-27 04:15:41] 2025-11-27 09:14:53,485 | INFO     | . Timing measurements:
[2025-11-27 04:15:41] 2025-11-27 09:14:53,485 | INFO     | . get job = 0 s
[2025-11-27 04:15:41] 2025-11-27 09:14:53,486 | INFO     | . initial setup = 2 s
[2025-11-27 04:15:41] 2025-11-27 09:14:53,486 | INFO     | . payload setup = 5 s
[2025-11-27 04:15:41] 2025-11-27 09:14:53,486 | INFO     | . stage-in = 0 s
[2025-11-27 04:15:41] 2025-11-27 09:14:53,486 | INFO     | . payload execution = 71021 s
[2025-11-27 04:15:41] 2025-11-27 09:14:53,486 | INFO     | . stage-out = 4 s
[2025-11-27 04:15:41] 2025-11-27 09:14:53,487 | INFO     | . log creation = 0 s
[2025-11-27 04:15:41] 2025-11-27 09:14:53,487 | INFO     | ..............................
[2025-11-27 04:15:41] 2025-11-27 09:14:53,566 | INFO     | 
[2025-11-27 04:15:41] 2025-11-27 09:14:53,566 | INFO     | job summary report
[2025-11-27 04:15:41] 2025-11-27 09:14:53,566 | INFO     | --------------------------------------------------
[2025-11-27 04:15:41] 2025-11-27 09:14:53,566 | INFO     | PanDA job id: 6896577517
[2025-11-27 04:15:41] 2025-11-27 09:14:53,566 | INFO     | task id: 47556173
[2025-11-27 04:15:41] 2025-11-27 09:14:53,566 | INFO     | errors: (none)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,567 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:15:41] 2025-11-27 09:14:53,567 | INFO     | pilot state: finished 
[2025-11-27 04:15:41] 2025-11-27 09:14:53,567 | INFO     | transexitcode: 0
[2025-11-27 04:15:41] 2025-11-27 09:14:53,567 | INFO     | exeerrorcode: 0
[2025-11-27 04:15:41] 2025-11-27 09:14:53,567 | INFO     | exeerrordiag: 
[2025-11-27 04:15:41] 2025-11-27 09:14:53,567 | INFO     | exitcode: 0
[2025-11-27 04:15:41] 2025-11-27 09:14:53,567 | INFO     | exitmsg: OK
[2025-11-27 04:15:41] 2025-11-27 09:14:53,567 | INFO     | cpuconsumptiontime: 550150 s
[2025-11-27 04:15:41] 2025-11-27 09:14:53,567 | INFO     | nevents: 1000
[2025-11-27 04:15:41] 2025-11-27 09:14:53,567 | INFO     | neventsw: 0
[2025-11-27 04:15:41] 2025-11-27 09:14:53,568 | INFO     | pid: 3448
[2025-11-27 04:15:41] 2025-11-27 09:14:53,568 | INFO     | pgrp: 3448
[2025-11-27 04:15:41] 2025-11-27 09:14:53,568 | INFO     | corecount: 8
[2025-11-27 04:15:41] 2025-11-27 09:14:53,568 | INFO     | event service: False
[2025-11-27 04:15:41] 2025-11-27 09:14:53,568 | INFO     | sizes: {0: 2284142, 1: 2284341, 5: 2284603, 12: 2284659, 71030: 2341567, 71035: 2350561, 71037: 2350745, 71042: 2350991}
[2025-11-27 04:15:41] 2025-11-27 09:14:53,568 | INFO     | --------------------------------------------------
[2025-11-27 04:15:41] 2025-11-27 09:14:53,568 | INFO     | 
[2025-11-27 04:15:41] 2025-11-27 09:14:53,568 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 04:15:41] 2025-11-27 09:14:53,585 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,586 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,586 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,586 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,586 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,586 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,589 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,589 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:15:41] 2025-11-27 09:14:53,589 | INFO     | job 6896577517 has completed (purged errors)
[2025-11-27 04:15:41] 2025-11-27 09:14:53,589 | INFO     | overall cleanup function is called
[2025-11-27 04:15:41] 2025-11-27 09:14:54,605 | INFO     | --- collectZombieJob: --- 10, [3448]
[2025-11-27 04:15:41] 2025-11-27 09:14:54,614 | INFO     | zombie collector waiting for pid 3448
[2025-11-27 04:15:41] 2025-11-27 09:14:54,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:15:41] 2025-11-27 09:14:54,615 | INFO     | collected zombie processes
[2025-11-27 04:15:41] 2025-11-27 09:14:54,615 | INFO     | will attempt to kill all subprocesses of pid=3448
[2025-11-27 04:15:41] 2025-11-27 09:14:54,758 | INFO     | process IDs to be killed: [3448] (in reverse order)
[2025-11-27 04:15:41] 2025-11-27 09:14:54,801 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:15:41] 2025-11-27 09:14:54,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:15:41] 2025-11-27 09:14:54,804 | INFO     | did not find any defunct processes belonging to 3448
[2025-11-27 04:15:41] 2025-11-27 09:14:54,806 | INFO     | did not find any defunct processes belonging to 3448
[2025-11-27 04:15:41] 2025-11-27 09:14:54,807 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:15:41] 2025-11-27 09:14:54,808 | INFO     | ready for new job
[2025-11-27 04:15:41] 2025-11-27 09:14:54,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:15:41] 2025-11-27 09:14:54,811 | INFO     | ***************************************
[2025-11-27 04:15:41] 2025-11-27 09:14:54,812 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:15:41] 2025-11-27 09:14:54,812 | INFO     | ***************************************
[2025-11-27 04:15:41] 2025-11-27 09:14:54,812 | INFO     | 
[2025-11-27 04:15:41] 2025-11-27 09:14:54,813 | INFO     | architecture information:
[2025-11-27 04:15:41] 2025-11-27 09:14:54,813 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:15:41] 2025-11-27 09:14:54,824 | INFO     | cat /etc/os-release:
[2025-11-27 04:15:41] NAME="CentOS Linux"
[2025-11-27 04:15:41] VERSION="7 (Core)"
[2025-11-27 04:15:41] ID="centos"
[2025-11-27 04:15:41] ID_LIKE="rhel fedora"
[2025-11-27 04:15:41] VERSION_ID="7"
[2025-11-27 04:15:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:15:41] ANSI_COLOR="0;31"
[2025-11-27 04:15:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:15:41] HOME_URL="https://www.centos.org/"
[2025-11-27 04:15:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:15:41] 
[2025-11-27 04:15:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:15:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:15:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:15:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:15:41] 
[2025-11-27 04:15:41] 2025-11-27 09:14:54,824 | INFO     | ***************************************
[2025-11-27 04:15:41] 2025-11-27 09:14:55,327 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 04:15:41] 2025-11-27 09:14:55,344 | INFO     | sufficient remaining disk space (25879904256 B)
[2025-11-27 04:15:41] 2025-11-27 09:14:55,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:15:41] 2025-11-27 09:14:55,345 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:15:41] 2025-11-27 09:14:55,345 | INFO     | update_server=False
[2025-11-27 04:15:41] 2025-11-27 09:14:55,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:15:41] 2025-11-27 09:14:55,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:15:41] 2025-11-27 09:14:55,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:15:41] 2025-11-27 09:14:55,346 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:15:41] 2025-11-27 09:14:55,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:15:41] 2025-11-27 09:14:55,518 | INFO     | aborting loop
[2025-11-27 04:15:41] 2025-11-27 09:14:56,036 | INFO     | all payload control threads have been joined
[2025-11-27 04:15:41] 2025-11-27 09:14:56,188 | INFO     | all data control threads have been joined
[2025-11-27 04:15:41] 2025-11-27 09:14:56,228 | INFO     | all job control threads have been joined
[2025-11-27 04:15:41] 2025-11-27 09:14:56,351 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:56,351 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:56,503 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:56,523 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:56,882 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:56,925 | INFO     | [job] validate thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:57,024 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:57,043 | INFO     | [payload] control thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:57,146 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:57,193 | INFO     | [data] control thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:57,234 | INFO     | [job] control thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:57,352 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:57,586 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:57,653 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:57,919 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:14:59,353 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:15:41] 2025-11-27 09:15:26,293 | INFO     | PID=28485 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 04:15:41] 2025-11-27 09:15:26,293 | INFO     | .. there are 3 such processes running
[2025-11-27 04:15:41] 2025-11-27 09:15:26,294 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:15:41] 2025-11-27 09:15:26,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:15:41] 2025-11-27 09:15:26,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:15:41] 2025-11-27 09:15:33,922 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:15:41] 2025-11-27 09:15:35,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140032525600576)>', '<ExcThread(monitor, started 140032073512704)>']
[2025-11-27 04:15:41] 2025-11-27 09:15:36,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:15:41] 2025-11-27 09:15:36,347 | INFO     | [monitor] control thread has ended
[2025-11-27 04:15:41] 2025-11-27 09:15:40,703 | INFO     | all workflow threads have been joined
[2025-11-27 04:15:41] 2025-11-27 09:15:40,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:15:41] 2025-11-27 09:15:40,709 | INFO     | traces error code: 0
[2025-11-27 04:15:41] 2025-11-27 09:15:40,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:15:41] 2025-11-27 09:15:40,823 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:15:41] 2025-11-27 09:15:40,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:15:41] 2025-11-27 09:15:40,828 [wrapper] pilotpid: 28485
[2025-11-27 04:15:41] 2025-11-27 09:15:40,830 [wrapper] Pilot exit status: 0
[2025-11-27 04:15:41] 2025-11-27 09:15:40,837 [wrapper] pandaids: 6896577517
[2025-11-27 04:15:41] 2025-11-27 09:15:40,867 [wrapper] cleanup supervisor_pilot  9308 28486
[2025-11-27 04:15:41] 2025-11-27 09:15:40,869 [wrapper] Test setup, not cleaning
[2025-11-27 04:15:41] 2025-11-27 09:15:40,871 [wrapper] apfmon messages muted
[2025-11-27 04:15:41] 2025-11-27 09:15:40,873 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:15:41] 2025-11-27 09:15:40,875 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:15:41]  *** Error codes and diagnostics ***
[2025-11-27 04:15:41]     "exeErrorCode": 0,
[2025-11-27 04:15:41]     "exeErrorDiag": "",
[2025-11-27 04:15:41]     "pilotErrorCode": 0,
[2025-11-27 04:15:41]     "pilotErrorDiag": "",
[2025-11-27 04:15:41]  *** Listing of results directory ***
[2025-11-27 04:15:41] total 1334576
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 00:11 queuedata.json
[2025-11-27 04:15:41] -rwx------ 1 boincer umatlas     36292 Nov 25 00:12 runpilot2-wrapper.sh
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas       100 Nov 26 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:15:41] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 08:30 run_atlas
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas       105 Nov 26 08:30 job.xml
[2025-11-27 04:15:41] -rw-r--r-- 2 boincer umatlas 410291824 Nov 26 08:30 EVNT.47483658._003064.pool.root.1
[2025-11-27 04:15:41] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 08:30 start_atlas.sh
[2025-11-27 04:15:41] drwxrwx--x 2 boincer umatlas      4096 Nov 26 08:30 shared
[2025-11-27 04:15:41] -rw-r--r-- 2 boincer umatlas    590099 Nov 26 08:30 input.tar.gz
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas         0 Nov 26 08:30 boinc_lockfile
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 08:30 pandaJob.out
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas        57 Nov 26 08:30 setup.sh.local
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas    991830 Nov 26 08:30 agis_schedconf.cvmfs.json
[2025-11-27 04:15:41] drwx------ 5 boincer umatlas      4096 Nov 26 08:30 pilot3
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas       533 Nov 27 04:02 boinc_task_state.xml
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas      5954 Nov 27 04:09 init_data.xml
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas 928109190 Nov 27 04:14 HITS.47556173._000464.pool.root.1
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas      1069 Nov 27 04:14 memory_monitor_summary.json
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas   1516240 Nov 27 04:14 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas   2329981 Nov 27 04:14 log.47556173._000464.job.log.tgz.1
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas      8677 Nov 27 04:14 heartbeat.json
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas        95 Nov 27 04:15 pilot_heartbeat.json
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 04:15 boinc_mmap_file
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas        29 Nov 27 04:15 wrapper_checkpoint.txt
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas      4821 Nov 27 04:15 pilotlog.txt
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas   9811211 Nov 27 04:15 log.47556173._000464.job.log.1
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas       353 Nov 27 04:15 output.list
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas       620 Nov 27 04:15 runtime_log
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas  12165120 Nov 27 04:15 result.tar.gz
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas       668 Nov 27 04:15 MeJMDmhW0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmu8LKDmQxXjWm.diag
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 04:15 runtime_log.err
[2025-11-27 04:15:41] -rw-r--r-- 1 boincer umatlas     21285 Nov 27 04:15 stderr.txt
[2025-11-27 04:15:41] HITS file was successfully produced:
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas 928109190 Nov 27 04:14 shared/HITS.pool.root.1
[2025-11-27 04:15:41]  *** Contents of shared directory: ***
[2025-11-27 04:15:41] total 1319516
[2025-11-27 04:15:41] -rw-r--r-- 2 boincer umatlas 410291824 Nov 26 08:30 ATLAS.root_0
[2025-11-27 04:15:41] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 08:30 start_atlas.sh
[2025-11-27 04:15:41] -rw-r--r-- 2 boincer umatlas    590099 Nov 26 08:30 input.tar.gz
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas 928109190 Nov 27 04:14 HITS.pool.root.1
[2025-11-27 04:15:41] -rw------- 1 boincer umatlas  12165120 Nov 27 04:15 result.tar.gz
04:15:42 (24779): run_atlas exited; CPU time 549020.738175
04:15:42 (24779): called boinc_finish(0)

</stderr_txt>
]]>

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