Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:10:40 (1625101): wrapper (7.7.26015): starting
13:10:40 (1625101): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 13:10:40] Arguments: --nthreads 9
[2025-11-26 13:10:40] Threads: 9
[2025-11-26 13:10:40] Checking for CVMFS
[2025-11-26 13:10:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:10:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:10:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:10:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:10:41] 2.13.3.0 11048 30392 413748 153330 3 790 20056909 32935936 25044 16776704 0 84668787 99.430 123393822 37678 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 13:10:41] CVMFS is ok
[2025-11-26 13:10:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:10:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 13:10:41] Further information can be found at the LHC@home message board.
[2025-11-26 13:10:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:10:41] Checking for apptainer binary...
[2025-11-26 13:10:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:10:41] Running /usr/bin/apptainer --version
[2025-11-26 13:10:41] apptainer version 1.4.4-1.el9
[2025-11-26 13:10:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:10:41] c6-1-24-2.aglt2.org
[2025-11-26 13:10:41] apptainer works
[2025-11-26 13:10:42] Set ATHENA_PROC_NUMBER=9
[2025-11-26 13:10:42] Set ATHENA_CORE_NUMBER=9
[2025-11-26 13:10:42] Starting ATLAS job with PandaID=6891561635
[2025-11-26 13:10:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:06:15]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:06:15] 2025-11-27 10:05:33,948 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:06:15] 2025-11-27 10:05:35,634 | INFO     | time since job start (57258s) is within the limit (172800.0s)
[2025-11-27 05:06:15] 2025-11-27 10:05:36,470 | INFO     | monitor loop #3346: job 0:6891561635 is in state 'finished'
[2025-11-27 05:06:15] 2025-11-27 10:05:36,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:06:15] 2025-11-27 10:05:37,642 | INFO     | time since job start (57260s) is within the limit (172800.0s)
[2025-11-27 05:06:15] 2025-11-27 10:05:38,691 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 05:06:15] 2025-11-27 10:05:38,708 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3096.8436964285715
[2025-11-27 05:06:15] 2025-11-27 10:05:38,742 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6891561635/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:06:15] 2025-11-27 10:05:38,743 | INFO     | extracted standard info from prmon json
[2025-11-27 05:06:15] 2025-11-27 10:05:38,743 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:06:15] 2025-11-27 10:05:38,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:06:15] 2025-11-27 10:05:38,804 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:06:15] 2025-11-27 10:05:38,817 | INFO     | sum of square deviations: 255106393985.26376
[2025-11-27 05:06:15] 2025-11-27 10:05:38,885 | INFO     | sum of deviations: 2080153127902.4316
[2025-11-27 05:06:15] 2025-11-27 10:05:38,885 | INFO     | mean x: 1764209306.6264675
[2025-11-27 05:06:15] 2025-11-27 10:05:38,885 | INFO     | mean y: 3097491.9583778013
[2025-11-27 05:06:15] 2025-11-27 10:05:38,885 | INFO     | intersect: -14382373017.51703
[2025-11-27 05:06:15] 2025-11-27 10:05:38,887 | INFO     | chi2: 14.998020755049717
[2025-11-27 05:06:15] 2025-11-27 10:05:38,901 | INFO     | sum of square deviations: 251045187987.86725
[2025-11-27 05:06:15] 2025-11-27 10:05:38,963 | INFO     | sum of deviations: 2414371768019.7915
[2025-11-27 05:06:15] 2025-11-27 10:05:38,984 | INFO     | mean x: 1764209154.139485
[2025-11-27 05:06:15] 2025-11-27 10:05:38,984 | INFO     | mean y: 3110038.0708154505
[2025-11-27 05:06:15] 2025-11-27 10:05:38,984 | INFO     | intersect: -16963782690.589268
[2025-11-27 05:06:15] 2025-11-27 10:05:38,976 | INFO     | monitor loop #3347: job 0:6891561635 is in state 'finished'
[2025-11-27 05:06:15] 2025-11-27 10:05:38,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:06:15] 2025-11-27 10:05:38,986 | INFO     | chi2: 11.765442093319614
[2025-11-27 05:06:15] 2025-11-27 10:05:38,986 | INFO     | current chi2=11.765442093319614 (change=21.553368371234715 %)
[2025-11-27 05:06:15] 2025-11-27 10:05:38,986 | INFO     | right removable region: 931
[2025-11-27 05:06:15] 2025-11-27 10:05:38,988 | INFO     | sum of square deviations: 251043743930.58685
[2025-11-27 05:06:15] 2025-11-27 10:05:39,005 | INFO     | sum of deviations: 1690965343519.882
[2025-11-27 05:06:15] 2025-11-27 10:05:39,005 | INFO     | mean x: 1764209459.140558
[2025-11-27 05:06:15] 2025-11-27 10:05:39,005 | INFO     | mean y: 3112100.413090129
[2025-11-27 05:06:15] 2025-11-27 10:05:39,005 | INFO     | intersect: -11880143811.120373
[2025-11-27 05:06:15] 2025-11-27 10:05:39,006 | INFO     | chi2: 11.230094222865779
[2025-11-27 05:06:15] 2025-11-27 10:05:39,006 | INFO     | current chi2=11.230094222865779 (change=25.12282516288229 %)
[2025-11-27 05:06:15] 2025-11-27 10:05:39,007 | INFO     | sum of square deviations: 247024613356.45554
[2025-11-27 05:06:15] 2025-11-27 10:05:39,023 | INFO     | sum of deviations: 1448368605405.6458
[2025-11-27 05:06:15] 2025-11-27 10:05:39,023 | INFO     | mean x: 1764209611.6515641
[2025-11-27 05:06:15] 2025-11-27 10:05:39,023 | INFO     | mean y: 3121296.8317152103
[2025-11-27 05:06:15] 2025-11-27 10:05:39,023 | INFO     | intersect: -10340891715.27988
[2025-11-27 05:06:15] 2025-11-27 10:05:39,024 | INFO     | chi2: 9.751301239335039
[2025-11-27 05:06:15] 2025-11-27 10:05:39,025 | INFO     | current chi2=9.751301239335039 (change=13.168126234593341 %)
[2025-11-27 05:06:15] 2025-11-27 10:05:39,025 | INFO     | left removable region: 20
[2025-11-27 05:06:15] 2025-11-27 10:05:39,026 | INFO     | sum of square deviations: 234454826384.88574
[2025-11-27 05:06:15] 2025-11-27 10:05:39,050 | INFO     | sum of deviations: 1709805595247.5122
[2025-11-27 05:06:15] 2025-11-27 10:05:39,050 | INFO     | mean x: 1764209733.665203
[2025-11-27 05:06:15] 2025-11-27 10:05:39,050 | INFO     | mean y: 3141865.883644347
[2025-11-27 05:06:15] 2025-11-27 10:05:39,050 | INFO     | intersect: -12862687003.252169
[2025-11-27 05:06:15] 2025-11-27 10:05:39,051 | INFO     | chi2: 5.809929102280351
[2025-11-27 05:06:15] 2025-11-27 10:05:39,052 | INFO     | current memory leak: 7.29 B/s (using 911 data points, chi2=5.81)
[2025-11-27 05:06:15] 2025-11-27 10:05:39,053 | INFO     | could have reported an average CPU frequency of 3043 MHz (35 samples)
[2025-11-27 05:06:15] 2025-11-27 10:05:39,053 | INFO     | ..............................
[2025-11-27 05:06:15] 2025-11-27 10:05:39,053 | INFO     | . Timing measurements:
[2025-11-27 05:06:15] 2025-11-27 10:05:39,053 | INFO     | . get job = 0 s
[2025-11-27 05:06:15] 2025-11-27 10:05:39,053 | INFO     | . initial setup = 3 s
[2025-11-27 05:06:15] 2025-11-27 10:05:39,053 | INFO     | . payload setup = 25 s
[2025-11-27 05:06:15] 2025-11-27 10:05:39,057 | INFO     | . stage-in = 0 s
[2025-11-27 05:06:15] 2025-11-27 10:05:39,057 | INFO     | . payload execution = 57144 s
[2025-11-27 05:06:15] 2025-11-27 10:05:39,057 | INFO     | . stage-out = 8 s
[2025-11-27 05:06:15] 2025-11-27 10:05:39,057 | INFO     | . log creation = 2 s
[2025-11-27 05:06:15] 2025-11-27 10:05:39,058 | INFO     | ..............................
[2025-11-27 05:06:15] 2025-11-27 10:05:39,467 | INFO     | 
[2025-11-27 05:06:15] 2025-11-27 10:05:39,467 | INFO     | job summary report
[2025-11-27 05:06:15] 2025-11-27 10:05:39,468 | INFO     | --------------------------------------------------
[2025-11-27 05:06:15] 2025-11-27 10:05:39,468 | INFO     | PanDA job id: 6891561635
[2025-11-27 05:06:15] 2025-11-27 10:05:39,468 | INFO     | task id: 47493068
[2025-11-27 05:06:15] 2025-11-27 10:05:39,469 | INFO     | errors: (none)
[2025-11-27 05:06:15] 2025-11-27 10:05:39,469 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:06:15] 2025-11-27 10:05:39,469 | INFO     | pilot state: finished 
[2025-11-27 05:06:15] 2025-11-27 10:05:39,469 | INFO     | transexitcode: 0
[2025-11-27 05:06:15] 2025-11-27 10:05:39,469 | INFO     | exeerrorcode: 0
[2025-11-27 05:06:15] 2025-11-27 10:05:39,469 | INFO     | exeerrordiag: 
[2025-11-27 05:06:15] 2025-11-27 10:05:39,469 | INFO     | exitcode: 0
[2025-11-27 05:06:15] 2025-11-27 10:05:39,469 | INFO     | exitmsg: OK
[2025-11-27 05:06:15] 2025-11-27 10:05:39,469 | INFO     | cpuconsumptiontime: 234447 s
[2025-11-27 05:06:15] 2025-11-27 10:05:39,470 | INFO     | nevents: 1000
[2025-11-27 05:06:15] 2025-11-27 10:05:39,470 | INFO     | neventsw: 0
[2025-11-27 05:06:15] 2025-11-27 10:05:39,470 | INFO     | pid: 1643306
[2025-11-27 05:06:15] 2025-11-27 10:05:39,470 | INFO     | pgrp: 1643306
[2025-11-27 05:06:15] 2025-11-27 10:05:39,470 | INFO     | corecount: 9
[2025-11-27 05:06:15] 2025-11-27 10:05:39,470 | INFO     | event service: False
[2025-11-27 05:06:15] 2025-11-27 10:05:39,470 | INFO     | sizes: {0: 2284129, 1: 2284328, 12: 2284328, 17: 2284618, 23: 2284646, 57172: 2335824, 57173: 2335951, 57181: 2345029, 57185: 2345085, 57221: 2345331}
[2025-11-27 05:06:15] 2025-11-27 10:05:39,470 | INFO     | --------------------------------------------------
[2025-11-27 05:06:15] 2025-11-27 10:05:39,470 | INFO     | 
[2025-11-27 05:06:15] 2025-11-27 10:05:39,470 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 05:06:15] 2025-11-27 10:05:39,689 | INFO     | time since job start (57262s) is within the limit (172800.0s)
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,702 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,702 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:06:15] 2025-11-27 10:05:39,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,702 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:06:15] 2025-11-27 10:05:39,702 | INFO     | job 6891561635 has completed (purged errors)
[2025-11-27 05:06:15] 2025-11-27 10:05:39,702 | INFO     | overall cleanup function is called
[2025-11-27 05:06:15] 2025-11-27 10:05:40,811 | INFO     | --- collectZombieJob: --- 10, [1643306]
[2025-11-27 05:06:15] 2025-11-27 10:05:40,811 | INFO     | zombie collector waiting for pid 1643306
[2025-11-27 05:06:15] 2025-11-27 10:05:40,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:06:15] 2025-11-27 10:05:40,812 | INFO     | collected zombie processes
[2025-11-27 05:06:15] 2025-11-27 10:05:40,812 | INFO     | will attempt to kill all subprocesses of pid=1643306
[2025-11-27 05:06:15] 2025-11-27 10:05:41,933 | INFO     | process IDs to be killed: [1643306] (in reverse order)
[2025-11-27 05:06:15] 2025-11-27 10:05:42,818 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:06:15] 2025-11-27 10:05:42,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:06:15] 2025-11-27 10:05:42,922 | INFO     | did not find any defunct processes belonging to 1643306
[2025-11-27 05:06:15] 2025-11-27 10:05:42,988 | INFO     | did not find any defunct processes belonging to 1643306
[2025-11-27 05:06:15] 2025-11-27 10:05:43,020 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:06:15] 2025-11-27 10:05:43,021 | INFO     | ready for new job
[2025-11-27 05:06:15] 2025-11-27 10:05:43,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:06:15] 2025-11-27 10:05:43,045 | INFO     | ***************************************
[2025-11-27 05:06:15] 2025-11-27 10:05:43,045 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:06:15] 2025-11-27 10:05:43,045 | INFO     | ***************************************
[2025-11-27 05:06:15] 2025-11-27 10:05:43,045 | INFO     | 
[2025-11-27 05:06:15] 2025-11-27 10:05:43,059 | INFO     | architecture information:
[2025-11-27 05:06:15] 2025-11-27 10:05:43,068 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:06:15] 2025-11-27 10:05:43,100 | INFO     | cat /etc/os-release:
[2025-11-27 05:06:15] NAME="CentOS Linux"
[2025-11-27 05:06:15] VERSION="7 (Core)"
[2025-11-27 05:06:15] ID="centos"
[2025-11-27 05:06:15] ID_LIKE="rhel fedora"
[2025-11-27 05:06:15] VERSION_ID="7"
[2025-11-27 05:06:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:06:15] ANSI_COLOR="0;31"
[2025-11-27 05:06:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:06:15] HOME_URL="https://www.centos.org/"
[2025-11-27 05:06:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:06:15] 
[2025-11-27 05:06:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:06:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:06:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:06:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:06:15] 
[2025-11-27 05:06:15] 2025-11-27 10:05:43,101 | INFO     | ***************************************
[2025-11-27 05:06:15] 2025-11-27 10:05:43,603 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 05:06:15] 2025-11-27 10:05:43,668 | INFO     | sufficient remaining disk space (69385322496 B)
[2025-11-27 05:06:15] 2025-11-27 10:05:43,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:06:15] 2025-11-27 10:05:43,668 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:06:15] 2025-11-27 10:05:43,668 | INFO     | update_server=False
[2025-11-27 05:06:15] 2025-11-27 10:05:43,668 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:06:15] 2025-11-27 10:05:43,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:06:15] 2025-11-27 10:05:44,014 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 05:06:15] 2025-11-27 10:05:44,014 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 05:06:15] 2025-11-27 10:05:44,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:06:15] 2025-11-27 10:05:44,015 | INFO     | will abort loop
[2025-11-27 05:06:15] 2025-11-27 10:05:44,037 | INFO     | all job control threads have been joined
[2025-11-27 05:06:15] 2025-11-27 10:05:44,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:06:15] 2025-11-27 10:05:44,674 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:44,745 | INFO     | all data control threads have been joined
[2025-11-27 05:06:15] 2025-11-27 10:05:44,986 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:45,018 | INFO     | all payload control threads have been joined
[2025-11-27 05:06:15] 2025-11-27 10:05:45,020 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:45,042 | INFO     | [job] control thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:45,472 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:45,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:06:15] 2025-11-27 10:05:45,645 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:45,675 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:45,753 | INFO     | [data] control thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:45,871 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:46,025 | INFO     | [payload] control thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:46,107 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:46,108 | INFO     | [job] validate thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:46,108 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:46,108 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:46,109 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:05:49,491 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:06:15] 2025-11-27 10:06:02,076 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:06:15] 2025-11-27 10:06:04,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494982022976)>', '<ExcThread(monitor, started 140494168364800)>']
[2025-11-27 05:06:15] 2025-11-27 10:06:09,031 | INFO     | all workflow threads have been joined
[2025-11-27 05:06:15] 2025-11-27 10:06:09,031 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:06:15] 2025-11-27 10:06:09,032 | INFO     | traces error code: 0
[2025-11-27 05:06:15] 2025-11-27 10:06:09,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:06:15] 2025-11-27 10:06:14,009 | INFO     | PID=1632964 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 05:06:15] 2025-11-27 10:06:14,031 | INFO     | .. there are 48 such processes running
[2025-11-27 05:06:15] 2025-11-27 10:06:14,055 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:06:15] 2025-11-27 10:06:14,055 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:06:15] 2025-11-27 10:06:14,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:06:15] 2025-11-27 10:06:14,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:06:15] 2025-11-27 10:06:14,056 | INFO     | [monitor] control thread has ended
[2025-11-27 05:06:15] 2025-11-27 10:06:14,271 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:06:15] 2025-11-27 10:06:14,289 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:06:15] 2025-11-27 10:06:14,302 [wrapper] pilotpid: 1632964
[2025-11-27 05:06:15] 2025-11-27 10:06:14,317 [wrapper] Pilot exit status: 0
[2025-11-27 05:06:15] 2025-11-27 10:06:14,403 [wrapper] pandaids: 6891561635
[2025-11-27 05:06:15] 2025-11-27 10:06:14,711 [wrapper] cleanup supervisor_pilot 2302488 1632965
[2025-11-27 05:06:15] 2025-11-27 10:06:14,742 [wrapper] Test setup, not cleaning
[2025-11-27 05:06:15] 2025-11-27 10:06:14,761 [wrapper] apfmon messages muted
[2025-11-27 05:06:15] 2025-11-27 10:06:14,780 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:06:15] 2025-11-27 10:06:14,803 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:06:15]  *** Error codes and diagnostics ***
[2025-11-27 05:06:15]     "exeErrorCode": 0,
[2025-11-27 05:06:15]     "exeErrorDiag": "",
[2025-11-27 05:06:15]     "pilotErrorCode": 0,
[2025-11-27 05:06:15]     "pilotErrorDiag": "",
[2025-11-27 05:06:15]  *** Listing of results directory ***
[2025-11-27 05:06:15] total 1331360
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-27 05:06:15] -rwx------. 1 boincer umatlas     36292 Nov 18 10:27 runpilot2-wrapper.sh
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:27 queuedata.json
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas       100 Nov 26 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:06:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 13:10 run_atlas
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas       105 Nov 26 13:10 job.xml
[2025-11-27 05:06:15] -rw-r--r--. 2 boincer umatlas 410738817 Nov 26 13:10 EVNT.47493065._000091.pool.root.1
[2025-11-27 05:06:15] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 13:10 start_atlas.sh
[2025-11-27 05:06:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 13:10 shared
[2025-11-27 05:06:15] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 13:10 input.tar.gz
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas         0 Nov 26 13:10 boinc_lockfile
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas      2771 Nov 26 13:10 pandaJob.out
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas    991530 Nov 26 13:11 agis_schedconf.cvmfs.json
[2025-11-27 05:06:15] drwx------. 5 boincer umatlas      4096 Nov 26 13:11 pilot3
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas       533 Nov 27 04:42 boinc_task_state.xml
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas      6845 Nov 27 05:02 init_data.xml
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas 930056972 Nov 27 05:03 HITS.47493068._000905.pool.root.1
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas      1058 Nov 27 05:04 memory_monitor_summary.json
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas   1516240 Nov 27 05:04 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas   2192684 Nov 27 05:04 log.47493068._000905.job.log.tgz.1
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas      8632 Nov 27 05:05 heartbeat.json
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas        95 Nov 27 05:06 pilot_heartbeat.json
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas       823 Nov 27 05:06 pilotlog.txt
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas        29 Nov 27 05:06 wrapper_checkpoint.txt
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 05:06 boinc_mmap_file
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas   7110043 Nov 27 05:06 log.47493068._000905.job.log.1
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas       353 Nov 27 05:06 output.list
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas       620 Nov 27 05:06 runtime_log
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas   9318400 Nov 27 05:06 result.tar.gz
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas       661 Nov 27 05:06 uNfNDmRncf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaPFKDma7Whpn.diag
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas      8709 Nov 27 05:06 runtime_log.err
[2025-11-27 05:06:15] -rw-r--r--. 1 boincer umatlas     21585 Nov 27 05:06 stderr.txt
[2025-11-27 05:06:15] HITS file was successfully produced:
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas 930056972 Nov 27 05:03 shared/HITS.pool.root.1
[2025-11-27 05:06:15]  *** Contents of shared directory: ***
[2025-11-27 05:06:15] total 1319080
[2025-11-27 05:06:15] -rw-r--r--. 2 boincer umatlas 410738817 Nov 26 13:10 ATLAS.root_0
[2025-11-27 05:06:15] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 13:10 start_atlas.sh
[2025-11-27 05:06:15] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 13:10 input.tar.gz
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas 930056972 Nov 27 05:03 HITS.pool.root.1
[2025-11-27 05:06:15] -rw-------. 1 boincer umatlas   9318400 Nov 27 05:06 result.tar.gz
05:06:17 (1625101): run_atlas exited; CPU time 235978.885571
05:06:17 (1625101): called boinc_finish(0)

</stderr_txt>
]]>

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