Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:48:55 (1029317): wrapper (7.7.26015): starting
08:48:55 (1029317): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 08:48:55] Arguments: --nthreads 8
[2025-11-26 08:48:55] Threads: 8
[2025-11-26 08:48:55] Checking for CVMFS
[2025-11-26 08:48:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:48:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:48:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:48:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:48:56] 2.13.2.0 7528 32991 164188 153323 1 348 34442358 40960001 20335 16776704 0 71082703 99.770 42882582 42153 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 08:48:56] CVMFS is ok
[2025-11-26 08:48:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:48:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:48:56] Further information can be found at the LHC@home message board.
[2025-11-26 08:48:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:48:56] Checking for apptainer binary...
[2025-11-26 08:48:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:48:56] Running /usr/bin/apptainer --version
[2025-11-26 08:48:56] apptainer version 1.4.4-1.el9
[2025-11-26 08:48:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:48:56] c-212-9.aglt2.org
[2025-11-26 08:48:56] apptainer works
[2025-11-26 08:48:56] Set ATHENA_PROC_NUMBER=8
[2025-11-26 08:48:56] Set ATHENA_CORE_NUMBER=8
[2025-11-26 08:48:56] Starting ATLAS job with PandaID=6895674330
[2025-11-26 08:48:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:28:32]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:28:32] 2025-11-27 08:27:50,546 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 03:28:32] 2025-11-27 08:27:50,552 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3043.9124375000006
[2025-11-27 03:28:32] 2025-11-27 08:27:50,568 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895674330/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,568 | INFO     | extracted standard info from prmon json
[2025-11-27 03:28:32] 2025-11-27 08:27:50,569 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:28:32] 2025-11-27 08:27:50,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:28:32] 2025-11-27 08:27:50,583 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:28:32] 2025-11-27 08:27:50,584 | INFO     | sum of square deviations: 410477170892.4547
[2025-11-27 03:28:32] 2025-11-27 08:27:50,604 | INFO     | sum of deviations: 2606059087356.1636
[2025-11-27 03:28:32] 2025-11-27 08:27:50,605 | INFO     | mean x: 1764198542.5063753
[2025-11-27 03:28:32] 2025-11-27 08:27:50,605 | INFO     | mean y: 2919777.6903460836
[2025-11-27 03:28:32] 2025-11-27 08:27:50,605 | INFO     | intersect: -11197716870.63574
[2025-11-27 03:28:32] 2025-11-27 08:27:50,606 | INFO     | chi2: 6.992341891978518
[2025-11-27 03:28:32] 2025-11-27 08:27:50,607 | INFO     | sum of square deviations: 404896110199.5568
[2025-11-27 03:28:32] 2025-11-27 08:27:50,626 | INFO     | sum of deviations: 2989122920548.699
[2025-11-27 03:28:32] 2025-11-27 08:27:50,626 | INFO     | mean x: 1764198390.020128
[2025-11-27 03:28:32] 2025-11-27 08:27:50,626 | INFO     | mean y: 2930245.013723696
[2025-11-27 03:28:32] 2025-11-27 08:27:50,626 | INFO     | intersect: -13021165840.78278
[2025-11-27 03:28:32] 2025-11-27 08:27:50,627 | INFO     | chi2: 3.733655874361665
[2025-11-27 03:28:32] 2025-11-27 08:27:50,627 | INFO     | current chi2=3.733655874361665 (change=46.60364249859058 %)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,628 | INFO     | sum of square deviations: 399365821244.80865
[2025-11-27 03:28:32] 2025-11-27 08:27:50,648 | INFO     | sum of deviations: 3031645411851.8735
[2025-11-27 03:28:32] 2025-11-27 08:27:50,649 | INFO     | mean x: 1764198237.5330882
[2025-11-27 03:28:32] 2025-11-27 08:27:50,649 | INFO     | mean y: 2931412.0036764704
[2025-11-27 03:28:32] 2025-11-27 08:27:50,649 | INFO     | intersect: -13389360085.910461
[2025-11-27 03:28:32] 2025-11-27 08:27:50,649 | INFO     | chi2: 3.485084278930658
[2025-11-27 03:28:32] 2025-11-27 08:27:50,650 | INFO     | current chi2=3.485084278930658 (change=6.6575925525944335 %)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,650 | INFO     | right removable region: 1087
[2025-11-27 03:28:32] 2025-11-27 08:27:50,651 | INFO     | sum of square deviations: 404894096589.5568
[2025-11-27 03:28:32] 2025-11-27 08:27:50,672 | INFO     | sum of deviations: 2220062103331.7866
[2025-11-27 03:28:32] 2025-11-27 08:27:50,672 | INFO     | mean x: 1764198695.020128
[2025-11-27 03:28:32] 2025-11-27 08:27:50,672 | INFO     | mean y: 2930316.373284538
[2025-11-27 03:28:32] 2025-11-27 08:27:50,672 | INFO     | intersect: -9670292135.007343
[2025-11-27 03:28:32] 2025-11-27 08:27:50,673 | INFO     | chi2: 3.836881092490268
[2025-11-27 03:28:32] 2025-11-27 08:27:50,673 | INFO     | current chi2=3.836881092490268 (change=45.127381472981675 %)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,674 | INFO     | sum of square deviations: 399362126914.9994
[2025-11-27 03:28:32] 2025-11-27 08:27:50,698 | INFO     | sum of deviations: 2134917288593.1582
[2025-11-27 03:28:32] 2025-11-27 08:27:50,699 | INFO     | mean x: 1764198847.530331
[2025-11-27 03:28:32] 2025-11-27 08:27:50,699 | INFO     | mean y: 2932663.252757353
[2025-11-27 03:28:32] 2025-11-27 08:27:50,699 | INFO     | intersect: -9428153477.046862
[2025-11-27 03:28:32] 2025-11-27 08:27:50,700 | INFO     | chi2: 3.771447890832685
[2025-11-27 03:28:32] 2025-11-27 08:27:50,700 | INFO     | current chi2=3.771447890832685 (change=1.7053747583069954 %)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,700 | INFO     | left removable region: 20
[2025-11-27 03:28:32] 2025-11-27 08:27:50,701 | INFO     | sum of square deviations: 376682056265.44324
[2025-11-27 03:28:32] 2025-11-27 08:27:50,725 | INFO     | sum of deviations: 2444509299322.3516
[2025-11-27 03:28:32] 2025-11-27 08:27:50,725 | INFO     | mean x: 1764198817.072165
[2025-11-27 03:28:32] 2025-11-27 08:27:50,725 | INFO     | mean y: 2947564.190253046
[2025-11-27 03:28:32] 2025-11-27 08:27:50,725 | INFO     | intersect: -11445966294.205387
[2025-11-27 03:28:32] 2025-11-27 08:27:50,726 | INFO     | chi2: 0.2101279432005528
[2025-11-27 03:28:32] 2025-11-27 08:27:50,726 | INFO     | current memory leak: 6.49 B/s (using 1067 data points, chi2=0.21)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,727 | INFO     | could have reported an average CPU frequency of 3018 MHz (40 samples)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,728 | INFO     | ..............................
[2025-11-27 03:28:32] 2025-11-27 08:27:50,728 | INFO     | . Timing measurements:
[2025-11-27 03:28:32] 2025-11-27 08:27:50,728 | INFO     | . get job = 0 s
[2025-11-27 03:28:32] 2025-11-27 08:27:50,728 | INFO     | . initial setup = 3 s
[2025-11-27 03:28:32] 2025-11-27 08:27:50,728 | INFO     | . payload setup = 45 s
[2025-11-27 03:28:32] 2025-11-27 08:27:50,728 | INFO     | . stage-in = 0 s
[2025-11-27 03:28:32] 2025-11-27 08:27:50,728 | INFO     | . payload execution = 66999 s
[2025-11-27 03:28:32] 2025-11-27 08:27:50,728 | INFO     | . stage-out = 3 s
[2025-11-27 03:28:32] 2025-11-27 08:27:50,728 | INFO     | . log creation = 0 s
[2025-11-27 03:28:32] 2025-11-27 08:27:50,728 | INFO     | ..............................
[2025-11-27 03:28:32] 2025-11-27 08:27:50,772 | INFO     | 
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | job summary report
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | --------------------------------------------------
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | PanDA job id: 6895674330
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | task id: 47556149
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | errors: (none)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | pilot state: finished 
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | transexitcode: 0
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | exeerrorcode: 0
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | exeerrordiag: 
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | exitcode: 0
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | exitmsg: OK
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | cpuconsumptiontime: 210542 s
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | nevents: 1000
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | neventsw: 0
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | pid: 1042788
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | pgrp: 1042788
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | corecount: 8
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | event service: False
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | sizes: {0: 2284264, 1: 2284264, 11: 2284292, 12: 2284582, 22: 2284610, 67048: 2341149, 67052: 2350199, 67058: 2350389}
[2025-11-27 03:28:32] 2025-11-27 08:27:50,773 | INFO     | --------------------------------------------------
[2025-11-27 03:28:32] 2025-11-27 08:27:50,774 | INFO     | 
[2025-11-27 03:28:32] 2025-11-27 08:27:50,774 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 03:28:32] 2025-11-27 08:27:50,786 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:28:32] 2025-11-27 08:27:50,788 | INFO     | job 6895674330 has completed (purged errors)
[2025-11-27 03:28:32] 2025-11-27 08:27:50,788 | INFO     | overall cleanup function is called
[2025-11-27 03:28:32] 2025-11-27 08:27:51,508 | INFO     | PID=1033352 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 03:28:32] 2025-11-27 08:27:51,508 | INFO     | .. there are 19 such processes running
[2025-11-27 03:28:32] 2025-11-27 08:27:51,800 | INFO     | --- collectZombieJob: --- 10, [1042788]
[2025-11-27 03:28:32] 2025-11-27 08:27:51,801 | INFO     | zombie collector waiting for pid 1042788
[2025-11-27 03:28:32] 2025-11-27 08:27:51,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:28:32] 2025-11-27 08:27:51,801 | INFO     | collected zombie processes
[2025-11-27 03:28:32] 2025-11-27 08:27:51,801 | INFO     | will attempt to kill all subprocesses of pid=1042788
[2025-11-27 03:28:32] 2025-11-27 08:27:52,212 | INFO     | process IDs to be killed: [1042788] (in reverse order)
[2025-11-27 03:28:32] 2025-11-27 08:27:52,368 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:28:32] 2025-11-27 08:27:52,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:28:32] 2025-11-27 08:27:52,387 | INFO     | did not find any defunct processes belonging to 1042788
[2025-11-27 03:28:32] 2025-11-27 08:27:52,405 | INFO     | did not find any defunct processes belonging to 1042788
[2025-11-27 03:28:32] 2025-11-27 08:27:52,407 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:28:32] 2025-11-27 08:27:52,407 | INFO     | ready for new job
[2025-11-27 03:28:32] 2025-11-27 08:27:52,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:28:32] 2025-11-27 08:27:52,413 | INFO     | ***************************************
[2025-11-27 03:28:32] 2025-11-27 08:27:52,413 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:28:32] 2025-11-27 08:27:52,413 | INFO     | ***************************************
[2025-11-27 03:28:32] 2025-11-27 08:27:52,413 | INFO     | 
[2025-11-27 03:28:32] 2025-11-27 08:27:52,419 | INFO     | architecture information:
[2025-11-27 03:28:32] 2025-11-27 08:27:52,420 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:28:32] 2025-11-27 08:27:52,441 | INFO     | cat /etc/os-release:
[2025-11-27 03:28:32] NAME="CentOS Linux"
[2025-11-27 03:28:32] VERSION="7 (Core)"
[2025-11-27 03:28:32] ID="centos"
[2025-11-27 03:28:32] ID_LIKE="rhel fedora"
[2025-11-27 03:28:32] VERSION_ID="7"
[2025-11-27 03:28:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:28:32] ANSI_COLOR="0;31"
[2025-11-27 03:28:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:28:32] HOME_URL="https://www.centos.org/"
[2025-11-27 03:28:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:28:32] 
[2025-11-27 03:28:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:28:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:28:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:28:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:28:32] 
[2025-11-27 03:28:32] 2025-11-27 08:27:52,441 | INFO     | ***************************************
[2025-11-27 03:28:32] 2025-11-27 08:27:52,944 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 03:28:32] 2025-11-27 08:27:52,978 | INFO     | sufficient remaining disk space (120522276864 B)
[2025-11-27 03:28:32] 2025-11-27 08:27:52,979 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:28:32] 2025-11-27 08:27:52,979 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:28:32] 2025-11-27 08:27:52,979 | INFO     | update_server=False
[2025-11-27 03:28:32] 2025-11-27 08:27:52,979 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:28:32] 2025-11-27 08:27:52,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:28:32] 2025-11-27 08:27:53,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:28:32] 2025-11-27 08:27:53,090 | INFO     | aborting loop
[2025-11-27 03:28:32] 2025-11-27 08:27:53,345 | INFO     | all data control threads have been joined
[2025-11-27 03:28:32] 2025-11-27 08:27:53,984 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:53,996 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:54,096 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:54,099 | INFO     | all payload control threads have been joined
[2025-11-27 03:28:32] 2025-11-27 08:27:54,351 | INFO     | [data] control thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:54,425 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:54,454 | INFO     | [job] validate thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:54,476 | INFO     | all job control threads have been joined
[2025-11-27 03:28:32] 2025-11-27 08:27:54,533 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:54,720 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:54,985 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:55,104 | INFO     | [payload] control thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:55,384 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:55,477 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:55,481 | INFO     | [job] control thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:55,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:28:32] 2025-11-27 08:27:55,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:28:32] 2025-11-27 08:27:56,795 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:27:59,549 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:03,758 | INFO     | job.realtimelogging is not enabled
[2025-11-27 03:28:32] 2025-11-27 08:28:04,771 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:28:32] 2025-11-27 08:28:24,078 | INFO     | PID=1033352 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:28:32] 2025-11-27 08:28:24,080 | INFO     | .. there are 19 such processes running
[2025-11-27 03:28:32] 2025-11-27 08:28:24,081 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:28:32] 2025-11-27 08:28:24,081 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:28:32] 2025-11-27 08:28:24,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:28:32] 2025-11-27 08:28:26,565 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:28:32] 2025-11-27 08:28:26,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695122458432)>', '<ExcThread(monitor, started 140694756759296)>']
[2025-11-27 03:28:32] 2025-11-27 08:28:27,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:28:32] 2025-11-27 08:28:27,098 | INFO     | [monitor] control thread has ended
[2025-11-27 03:28:32] 2025-11-27 08:28:31,741 | INFO     | all workflow threads have been joined
[2025-11-27 03:28:32] 2025-11-27 08:28:31,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:28:32] 2025-11-27 08:28:31,742 | INFO     | traces error code: 0
[2025-11-27 03:28:32] 2025-11-27 08:28:31,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:28:32] 2025-11-27 08:28:31,869 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:28:32] 2025-11-27 08:28:31,876 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:28:32] 2025-11-27 08:28:31,880 [wrapper] pilotpid: 1033352
[2025-11-27 03:28:32] 2025-11-27 08:28:31,882 [wrapper] Pilot exit status: 0
[2025-11-27 03:28:32] 2025-11-27 08:28:31,894 [wrapper] pandaids: 6895674330
[2025-11-27 03:28:32] 2025-11-27 08:28:31,988 [wrapper] cleanup supervisor_pilot 3693176 1033353
[2025-11-27 03:28:32] 2025-11-27 08:28:31,993 [wrapper] Test setup, not cleaning
[2025-11-27 03:28:32] 2025-11-27 08:28:31,998 [wrapper] apfmon messages muted
[2025-11-27 03:28:32] 2025-11-27 08:28:32,013 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:28:32] 2025-11-27 08:28:32,019 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:28:32]  *** Error codes and diagnostics ***
[2025-11-27 03:28:32]     "exeErrorCode": 0,
[2025-11-27 03:28:32]     "exeErrorDiag": "",
[2025-11-27 03:28:32]     "pilotErrorCode": 0,
[2025-11-27 03:28:32]     "pilotErrorDiag": "",
[2025-11-27 03:28:32]  *** Listing of results directory ***
[2025-11-27 03:28:32] total 1314092
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 08:08 pilot3.tar.gz
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 08:26 queuedata.json
[2025-11-27 03:28:32] -rwx------. 1 boincer umatlas     36292 Nov 24 08:28 runpilot2-wrapper.sh
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas       100 Nov 26 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:28:32] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 08:48 run_atlas
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas       105 Nov 26 08:48 job.xml
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas 409705712 Nov 26 08:48 EVNT.47483658._001352.pool.root.1
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:48 start_atlas.sh
[2025-11-27 03:28:32] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 08:48 shared
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 08:48 input.tar.gz
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas         0 Nov 26 08:48 boinc_lockfile
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 08:48 pandaJob.out
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas        57 Nov 26 08:48 setup.sh.local
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas    991830 Nov 26 08:49 agis_schedconf.cvmfs.json
[2025-11-27 03:28:32] drwx------. 5 boincer umatlas      4096 Nov 26 08:49 pilot3
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas       532 Nov 27 03:19 boinc_task_state.xml
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 03:20 init_data.xml
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas 909828953 Nov 27 03:27 HITS.47556149._003390.pool.root.1
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas      1051 Nov 27 03:27 memory_monitor_summary.json
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:27 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas   2218655 Nov 27 03:27 log.47556149._003390.job.log.tgz.1
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas      8588 Nov 27 03:27 heartbeat.json
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas        95 Nov 27 03:28 pilot_heartbeat.json
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:28 wrapper_checkpoint.txt
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:28 boinc_mmap_file
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas      4897 Nov 27 03:28 pilotlog.txt
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas   8866846 Nov 27 03:28 log.47556149._003390.job.log.1
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas       353 Nov 27 03:28 output.list
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:28 runtime_log
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas  11110400 Nov 27 03:28 result.tar.gz
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 03:28 runtime_log.err
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas       660 Nov 27 03:28 LbgKDm5mlh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0hLKDm3mzamm.diag
[2025-11-27 03:28:32] -rw-r--r--. 1 boincer umatlas     21372 Nov 27 03:28 stderr.txt
[2025-11-27 03:28:32] HITS file was successfully produced:
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas 909828953 Nov 27 03:27 shared/HITS.pool.root.1
[2025-11-27 03:28:32]  *** Contents of shared directory: ***
[2025-11-27 03:28:32] total 1300064
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas 409705712 Nov 26 08:48 ATLAS.root_0
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:48 start_atlas.sh
[2025-11-27 03:28:32] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 08:48 input.tar.gz
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas 909828953 Nov 27 03:27 HITS.pool.root.1
[2025-11-27 03:28:32] -rw-------. 1 boincer umatlas  11110400 Nov 27 03:28 result.tar.gz
03:28:33 (1029317): run_atlas exited; CPU time 211188.659558
03:28:33 (1029317): called boinc_finish(0)

</stderr_txt>
]]>

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