Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:34:17 (14119): wrapper (7.7.26015): starting
07:34:17 (14119): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 07:34:17] Arguments: --nthreads 12
[2025-11-26 07:34:17] Threads: 12
[2025-11-26 07:34:17] Checking for CVMFS
[2025-11-26 07:34:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 07:34:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 07:34:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 07:34:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 07:34:18] 2.11.2.0 6893 117601 89436 153322 3 81 11619348 20275201 1 130560 0 50347585 99.933 6025494 31236 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 07:34:18] CVMFS is ok
[2025-11-26 07:34:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 07:34:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 07:34:18] Further information can be found at the LHC@home message board.
[2025-11-26 07:34:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 07:34:18] Checking for apptainer binary...
[2025-11-26 07:34:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 07:34:18] Running /usr/bin/apptainer --version
[2025-11-26 07:34:18] apptainer version 1.3.2-1.el7
[2025-11-26 07:34:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 07:34:19] c-205-3.aglt2.org
[2025-11-26 07:34:19] apptainer works
[2025-11-26 07:34:19] Set ATHENA_PROC_NUMBER=12
[2025-11-26 07:34:19] Set ATHENA_CORE_NUMBER=12
[2025-11-26 07:34:19] Starting ATLAS job with PandaID=6896450990
[2025-11-26 07:34:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 14:43:24]  *** The last 200 lines of the pilot log: ***
[2025-11-26 14:43:24] 2025-11-26 19:42:16,547 | INFO     | time since job start (25661s) is within the limit (172800.0s)
[2025-11-26 14:43:24] 2025-11-26 19:42:17,028 | INFO     | monitor loop #1924: job 0:6896450990 is in state 'finished'
[2025-11-26 14:43:24] 2025-11-26 19:42:17,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:43:24] 2025-11-26 19:42:18,552 | INFO     | time since job start (25663s) is within the limit (172800.0s)
[2025-11-26 14:43:24] 2025-11-26 19:42:18,647 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 14:43:24] 2025-11-26 19:42:18,651 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-26 14:43:24] 2025-11-26 19:42:18,654 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896450990/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 14:43:24] 2025-11-26 19:42:18,654 | INFO     | extracted standard info from prmon json
[2025-11-26 14:43:24] 2025-11-26 19:42:18,654 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 14:43:24] 2025-11-26 19:42:18,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 14:43:24] 2025-11-26 19:42:18,662 | INFO     | fitting pss+swap vs Time
[2025-11-26 14:43:24] 2025-11-26 19:42:18,663 | INFO     | sum of square deviations: 22973281757.133373
[2025-11-26 14:43:24] 2025-11-26 19:42:18,666 | INFO     | sum of deviations: 391154051271.2667
[2025-11-26 14:43:24] 2025-11-26 19:42:18,667 | INFO     | mean x: 1764173284.7666667
[2025-11-26 14:43:24] 2025-11-26 19:42:18,667 | INFO     | mean y: 3433975.961904762
[2025-11-26 14:43:24] 2025-11-26 19:42:18,667 | INFO     | intersect: -30034221713.641514
[2025-11-26 14:43:24] 2025-11-26 19:42:18,667 | INFO     | chi2: 4.681535940690232
[2025-11-26 14:43:24] 2025-11-26 19:42:18,668 | INFO     | sum of square deviations: 22162565831.7736
[2025-11-26 14:43:24] 2025-11-26 19:42:18,671 | INFO     | sum of deviations: 528637031155.61456
[2025-11-26 14:43:24] 2025-11-26 19:42:18,672 | INFO     | mean x: 1764173132.2698796
[2025-11-26 14:43:24] 2025-11-26 19:42:18,672 | INFO     | mean y: 3459791.2891566264
[2025-11-26 14:43:24] 2025-11-26 19:42:18,672 | INFO     | intersect: -42076832453.1498
[2025-11-26 14:43:24] 2025-11-26 19:42:18,672 | INFO     | chi2: 2.346965114763221
[2025-11-26 14:43:24] 2025-11-26 19:42:18,672 | INFO     | current chi2=2.346965114763221 (change=49.867625828432885 %)
[2025-11-26 14:43:24] 2025-11-26 19:42:18,673 | INFO     | sum of square deviations: 21371152593.904835
[2025-11-26 14:43:24] 2025-11-26 19:42:18,677 | INFO     | sum of deviations: 531007598354.2025
[2025-11-26 14:43:24] 2025-11-26 19:42:18,677 | INFO     | mean x: 1764172979.7731707
[2025-11-26 14:43:24] 2025-11-26 19:42:18,677 | INFO     | mean y: 3460221.636585366
[2025-11-26 14:43:24] 2025-11-26 19:42:18,677 | INFO     | intersect: -43830827749.23802
[2025-11-26 14:43:24] 2025-11-26 19:42:18,677 | INFO     | chi2: 2.254271664895077
[2025-11-26 14:43:24] 2025-11-26 19:42:18,677 | INFO     | current chi2=2.254271664895077 (change=3.9495026698552267 %)
[2025-11-26 14:43:24] 2025-11-26 19:42:18,678 | INFO     | right removable region: 409
[2025-11-26 14:43:24] 2025-11-26 19:42:18,678 | INFO     | sum of square deviations: 22162497511.77357
[2025-11-26 14:43:24] 2025-11-26 19:42:18,682 | INFO     | sum of deviations: 263094224080.81195
[2025-11-26 14:43:24] 2025-11-26 19:42:18,682 | INFO     | mean x: 1764173437.2698796
[2025-11-26 14:43:24] 2025-11-26 19:42:18,682 | INFO     | mean y: 3457975.8409638554
[2025-11-26 14:43:24] 2025-11-26 19:42:18,682 | INFO     | intersect: -20939300906.632767
[2025-11-26 14:43:24] 2025-11-26 19:42:18,683 | INFO     | chi2: 2.55074941581786
[2025-11-26 14:43:24] 2025-11-26 19:42:18,683 | INFO     | current chi2=2.55074941581786 (change=45.514689022300125 %)
[2025-11-26 14:43:24] 2025-11-26 19:42:18,683 | INFO     | sum of square deviations: 21371041268.448765
[2025-11-26 14:43:24] 2025-11-26 19:42:18,687 | INFO     | sum of deviations: 230790173151.49258
[2025-11-26 14:43:24] 2025-11-26 19:42:18,687 | INFO     | mean x: 1764173589.7707317
[2025-11-26 14:43:24] 2025-11-26 19:42:18,687 | INFO     | mean y: 3464193.8243902437
[2025-11-26 14:43:24] 2025-11-26 19:42:18,687 | INFO     | intersect: -19048201241.569298
[2025-11-26 14:43:24] 2025-11-26 19:42:18,688 | INFO     | chi2: 2.498352058030581
[2025-11-26 14:43:24] 2025-11-26 19:42:18,688 | INFO     | current chi2=2.498352058030581 (change=2.0541946403025446 %)
[2025-11-26 14:43:24] 2025-11-26 19:42:18,688 | INFO     | left removable region: 20
[2025-11-26 14:43:24] 2025-11-26 19:42:18,688 | INFO     | sum of square deviations: 18252555010.457764
[2025-11-26 14:43:24] 2025-11-26 19:42:18,692 | INFO     | sum of deviations: 328887255017.1236
[2025-11-26 14:43:24] 2025-11-26 19:42:18,692 | INFO     | mean x: 1764173559.2802057
[2025-11-26 14:43:24] 2025-11-26 19:42:18,692 | INFO     | mean y: 3499872.4575835476
[2025-11-26 14:43:24] 2025-11-26 19:42:18,692 | INFO     | intersect: -31784608639.09179
[2025-11-26 14:43:24] 2025-11-26 19:42:18,692 | INFO     | chi2: 0.029484481168368642
[2025-11-26 14:43:24] 2025-11-26 19:42:18,693 | INFO     | current memory leak: 18.02 B/s (using 389 data points, chi2=0.03)
[2025-11-26 14:43:24] 2025-11-26 19:42:18,693 | INFO     | could have reported an average CPU frequency of 2376 MHz (18 samples)
[2025-11-26 14:43:24] 2025-11-26 19:42:18,693 | INFO     | ..............................
[2025-11-26 14:43:24] 2025-11-26 19:42:18,693 | INFO     | . Timing measurements:
[2025-11-26 14:43:24] 2025-11-26 19:42:18,693 | INFO     | . get job = 0 s
[2025-11-26 14:43:24] 2025-11-26 19:42:18,693 | INFO     | . initial setup = 2 s
[2025-11-26 14:43:24] 2025-11-26 19:42:18,694 | INFO     | . payload setup = 7 s
[2025-11-26 14:43:24] 2025-11-26 19:42:18,694 | INFO     | . stage-in = 0 s
[2025-11-26 14:43:24] 2025-11-26 19:42:18,694 | INFO     | . payload execution = 25624 s
[2025-11-26 14:43:24] 2025-11-26 19:42:18,694 | INFO     | . stage-out = 3 s
[2025-11-26 14:43:24] 2025-11-26 19:42:18,694 | INFO     | . log creation = 0 s
[2025-11-26 14:43:24] 2025-11-26 19:42:18,694 | INFO     | ..............................
[2025-11-26 14:43:24] 2025-11-26 19:42:18,937 | INFO     | 
[2025-11-26 14:43:24] 2025-11-26 19:42:18,938 | INFO     | job summary report
[2025-11-26 14:43:24] 2025-11-26 19:42:18,938 | INFO     | --------------------------------------------------
[2025-11-26 14:43:24] 2025-11-26 19:42:18,938 | INFO     | PanDA job id: 6896450990
[2025-11-26 14:43:24] 2025-11-26 19:42:18,938 | INFO     | task id: 47556149
[2025-11-26 14:43:24] 2025-11-26 19:42:18,938 | INFO     | errors: (none)
[2025-11-26 14:43:24] 2025-11-26 19:42:18,938 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 14:43:24] 2025-11-26 19:42:18,939 | INFO     | pilot state: finished 
[2025-11-26 14:43:24] 2025-11-26 19:42:18,939 | INFO     | transexitcode: 0
[2025-11-26 14:43:24] 2025-11-26 19:42:18,939 | INFO     | exeerrorcode: 0
[2025-11-26 14:43:24] 2025-11-26 19:42:18,939 | INFO     | exeerrordiag: 
[2025-11-26 14:43:24] 2025-11-26 19:42:18,939 | INFO     | exitcode: 0
[2025-11-26 14:43:24] 2025-11-26 19:42:18,939 | INFO     | exitmsg: OK
[2025-11-26 14:43:24] 2025-11-26 19:42:18,940 | INFO     | cpuconsumptiontime: 295247 s
[2025-11-26 14:43:24] 2025-11-26 19:42:18,940 | INFO     | nevents: 1000
[2025-11-26 14:43:24] 2025-11-26 19:42:18,940 | INFO     | neventsw: 0
[2025-11-26 14:43:24] 2025-11-26 19:42:18,940 | INFO     | pid: 24214
[2025-11-26 14:43:24] 2025-11-26 19:42:18,940 | INFO     | pgrp: 24214
[2025-11-26 14:43:24] 2025-11-26 19:42:18,941 | INFO     | corecount: 12
[2025-11-26 14:43:24] 2025-11-26 19:42:18,941 | INFO     | event service: False
[2025-11-26 14:43:24] 2025-11-26 19:42:18,941 | INFO     | sizes: {0: 2284264, 5: 2284526, 11: 2284582, 25635: 2321762, 25639: 2330756, 25642: 2330812, 25647: 2331186}
[2025-11-26 14:43:24] 2025-11-26 19:42:18,941 | INFO     | --------------------------------------------------
[2025-11-26 14:43:24] 2025-11-26 19:42:18,941 | INFO     | 
[2025-11-26 14:43:24] 2025-11-26 19:42:18,941 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 14:43:24] 2025-11-26 19:42:19,095 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,096 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,096 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,096 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,096 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,098 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 14:43:24] 2025-11-26 19:42:19,098 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,098 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 14:43:24] 2025-11-26 19:42:19,099 | INFO     | job 6896450990 has completed (purged errors)
[2025-11-26 14:43:24] 2025-11-26 19:42:19,099 | INFO     | overall cleanup function is called
[2025-11-26 14:43:24] 2025-11-26 19:42:20,114 | INFO     | --- collectZombieJob: --- 10, [24214]
[2025-11-26 14:43:24] 2025-11-26 19:42:20,114 | INFO     | zombie collector waiting for pid 24214
[2025-11-26 14:43:24] 2025-11-26 19:42:20,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 14:43:24] 2025-11-26 19:42:20,115 | INFO     | collected zombie processes
[2025-11-26 14:43:24] 2025-11-26 19:42:20,115 | INFO     | will attempt to kill all subprocesses of pid=24214
[2025-11-26 14:43:24] 2025-11-26 19:42:20,204 | INFO     | process IDs to be killed: [24214] (in reverse order)
[2025-11-26 14:43:24] 2025-11-26 19:42:20,258 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 14:43:24] 2025-11-26 19:42:20,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 14:43:24] 2025-11-26 19:42:20,261 | INFO     | did not find any defunct processes belonging to 24214
[2025-11-26 14:43:24] 2025-11-26 19:42:20,263 | INFO     | did not find any defunct processes belonging to 24214
[2025-11-26 14:43:24] 2025-11-26 19:42:20,265 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 14:43:24] 2025-11-26 19:42:20,265 | INFO     | ready for new job
[2025-11-26 14:43:24] 2025-11-26 19:42:20,265 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 14:43:24] 2025-11-26 19:42:20,267 | INFO     | ***************************************
[2025-11-26 14:43:24] 2025-11-26 19:42:20,268 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 14:43:24] 2025-11-26 19:42:20,268 | INFO     | ***************************************
[2025-11-26 14:43:24] 2025-11-26 19:42:20,268 | INFO     | 
[2025-11-26 14:43:24] 2025-11-26 19:42:20,268 | INFO     | architecture information:
[2025-11-26 14:43:24] 2025-11-26 19:42:20,269 | INFO     | executing command: cat /etc/os-release
[2025-11-26 14:43:24] 2025-11-26 19:42:20,283 | INFO     | cat /etc/os-release:
[2025-11-26 14:43:24] NAME="CentOS Linux"
[2025-11-26 14:43:24] VERSION="7 (Core)"
[2025-11-26 14:43:24] ID="centos"
[2025-11-26 14:43:24] ID_LIKE="rhel fedora"
[2025-11-26 14:43:24] VERSION_ID="7"
[2025-11-26 14:43:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 14:43:24] ANSI_COLOR="0;31"
[2025-11-26 14:43:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 14:43:24] HOME_URL="https://www.centos.org/"
[2025-11-26 14:43:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 14:43:24] 
[2025-11-26 14:43:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 14:43:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 14:43:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 14:43:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 14:43:24] 
[2025-11-26 14:43:24] 2025-11-26 19:42:20,284 | INFO     | ***************************************
[2025-11-26 14:43:24] 2025-11-26 19:42:20,787 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 14:43:24] 2025-11-26 19:42:20,806 | INFO     | sufficient remaining disk space (28389146624 B)
[2025-11-26 14:43:24] 2025-11-26 19:42:20,806 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 14:43:24] 2025-11-26 19:42:20,806 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 14:43:24] 2025-11-26 19:42:20,806 | INFO     | update_server=False
[2025-11-26 14:43:24] 2025-11-26 19:42:20,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 14:43:24] 2025-11-26 19:42:20,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:43:24] 2025-11-26 19:42:20,807 | INFO     | aborting loop
[2025-11-26 14:43:24] 2025-11-26 19:42:21,090 | INFO     | all job control threads have been joined
[2025-11-26 14:43:24] 2025-11-26 19:42:21,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 14:43:24] 2025-11-26 19:42:21,501 | INFO     | all data control threads have been joined
[2025-11-26 14:43:24] 2025-11-26 19:42:21,812 | INFO     | [job] retrieve thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:21,812 | INFO     | all payload control threads have been joined
[2025-11-26 14:43:24] 2025-11-26 19:42:21,813 | INFO     | [job] job monitor thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:22,012 | INFO     | [data] copytool_in thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:22,083 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:22,095 | INFO     | [job] control thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:22,161 | INFO     | [payload] failed_post thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:22,393 | INFO     | [job] validate thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:22,443 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:22,506 | INFO     | [data] control thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:22,741 | INFO     | [payload] validate_post thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:22,816 | INFO     | [payload] control thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:22,908 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:22,949 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:23,261 | INFO     | [data] copytool_out thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:23,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:43:24] 2025-11-26 19:42:23,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 14:43:24] 2025-11-26 19:42:24,788 | INFO     | [job] queue monitor thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:27,951 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 14:43:24] 2025-11-26 19:42:51,748 | INFO     | PID=17818 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 14:43:24] 2025-11-26 19:42:51,749 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 14:43:24] 2025-11-26 19:42:51,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 14:43:24] 2025-11-26 19:42:51,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 14:43:24] 2025-11-26 19:43:17,411 | INFO     | [monitor] cgroup control has ended
[2025-11-26 14:43:24] 2025-11-26 19:43:19,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140284490585920)>', '<ExcThread(monitor, started 140283689821952)>']
[2025-11-26 14:43:24] 2025-11-26 19:43:19,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 14:43:24] 2025-11-26 19:43:19,885 | INFO     | [monitor] control thread has ended
[2025-11-26 14:43:24] 2025-11-26 19:43:24,149 | INFO     | all workflow threads have been joined
[2025-11-26 14:43:24] 2025-11-26 19:43:24,149 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 14:43:24] 2025-11-26 19:43:24,149 | INFO     | traces error code: 0
[2025-11-26 14:43:24] 2025-11-26 19:43:24,150 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 14:43:24] 2025-11-26 19:43:24,247 [wrapper] ==== pilot stdout END ====
[2025-11-26 14:43:24] 2025-11-26 19:43:24,251 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 14:43:24] 2025-11-26 19:43:24,255 [wrapper] pilotpid: 17818
[2025-11-26 14:43:24] 2025-11-26 19:43:24,259 [wrapper] Pilot exit status: 0
[2025-11-26 14:43:24] 2025-11-26 19:43:24,274 [wrapper] pandaids: 6896450990
[2025-11-26 14:43:24] 2025-11-26 19:43:24,318 [wrapper] cleanup supervisor_pilot 26521 17819
[2025-11-26 14:43:24] 2025-11-26 19:43:24,322 [wrapper] Test setup, not cleaning
[2025-11-26 14:43:24] 2025-11-26 19:43:24,326 [wrapper] apfmon messages muted
[2025-11-26 14:43:24] 2025-11-26 19:43:24,330 [wrapper] ==== wrapper stdout END ====
[2025-11-26 14:43:24] 2025-11-26 19:43:24,334 [wrapper] ==== wrapper stderr END ====
[2025-11-26 14:43:24]  *** Error codes and diagnostics ***
[2025-11-26 14:43:24]     "exeErrorCode": 0,
[2025-11-26 14:43:24]     "exeErrorDiag": "",
[2025-11-26 14:43:24]     "pilotErrorCode": 0,
[2025-11-26 14:43:24]     "pilotErrorDiag": "",
[2025-11-26 14:43:24]  *** Listing of results directory ***
[2025-11-26 14:43:24] total 1296720
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 23:21 queuedata.json
[2025-11-26 14:43:24] -rwx------ 1 boincer umatlas     36292 Nov 24 23:23 runpilot2-wrapper.sh
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas       100 Nov 26 07:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 14:43:24] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 07:34 run_atlas
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas       105 Nov 26 07:34 job.xml
[2025-11-26 14:43:24] -rw-r--r-- 2 boincer umatlas 408446284 Nov 26 07:34 EVNT.47483658._001506.pool.root.1
[2025-11-26 14:43:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 07:34 start_atlas.sh
[2025-11-26 14:43:24] drwxrwx--x 2 boincer umatlas      4096 Nov 26 07:34 shared
[2025-11-26 14:43:24] -rw-r--r-- 2 boincer umatlas    590109 Nov 26 07:34 input.tar.gz
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas         0 Nov 26 07:34 boinc_lockfile
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 07:34 pandaJob.out
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas        57 Nov 26 07:34 setup.sh.local
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas    991830 Nov 26 07:34 agis_schedconf.cvmfs.json
[2025-11-26 14:43:24] drwx------ 5 boincer umatlas      4096 Nov 26 07:34 pilot3
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas       532 Nov 26 14:34 boinc_task_state.xml
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas      5955 Nov 26 14:39 init_data.xml
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas 903922178 Nov 26 14:41 HITS.47556149._004930.pool.root.1
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas      1061 Nov 26 14:42 memory_monitor_summary.json
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas   1516240 Nov 26 14:42 agis_ddmendpoints.agis.ALL.json
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas   2181184 Nov 26 14:42 log.47556149._004930.job.log.tgz.1
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas      8662 Nov 26 14:42 heartbeat.json
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas        95 Nov 26 14:42 pilot_heartbeat.json
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas        29 Nov 26 14:42 wrapper_checkpoint.txt
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas      4746 Nov 26 14:43 pilotlog.txt
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 14:43 boinc_mmap_file
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas   3594769 Nov 26 14:43 log.47556149._004930.job.log.1
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas       353 Nov 26 14:43 output.list
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas       620 Nov 26 14:43 runtime_log
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas   5795840 Nov 26 14:43 result.tar.gz
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas      9340 Nov 26 14:43 runtime_log.err
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas       669 Nov 26 14:43 FDgNDmWlzh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm96LKDmm8GaFo.diag
[2025-11-26 14:43:24] -rw-r--r-- 1 boincer umatlas     21310 Nov 26 14:43 stderr.txt
[2025-11-26 14:43:24] HITS file was successfully produced:
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas 903922178 Nov 26 14:41 shared/HITS.pool.root.1
[2025-11-26 14:43:24]  *** Contents of shared directory: ***
[2025-11-26 14:43:24] total 1287876
[2025-11-26 14:43:24] -rw-r--r-- 2 boincer umatlas 408446284 Nov 26 07:34 ATLAS.root_0
[2025-11-26 14:43:24] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 07:34 start_atlas.sh
[2025-11-26 14:43:24] -rw-r--r-- 2 boincer umatlas    590109 Nov 26 07:34 input.tar.gz
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas 903922178 Nov 26 14:41 HITS.pool.root.1
[2025-11-26 14:43:24] -rw------- 1 boincer umatlas   5795840 Nov 26 14:43 result.tar.gz
14:43:25 (14119): run_atlas exited; CPU time 288694.615649
14:43:25 (14119): called boinc_finish(0)

</stderr_txt>
]]>

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