Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:00:20 (27772): wrapper (7.7.26015): starting
08:00:20 (27772): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 08:00:20] Arguments: --nthreads 8
[2025-11-26 08:00:20] Threads: 8
[2025-11-26 08:00:20] Checking for CVMFS
[2025-11-26 08:00:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:00:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:00:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:00:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:00:20] 2.13.3.0 12763 30036 158740 153322 3 536 39333254 40960001 46658 16776704 0 254170312 99.741 157369866 35816 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 08:00:20] CVMFS is ok
[2025-11-26 08:00:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:00:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:00:20] Further information can be found at the LHC@home message board.
[2025-11-26 08:00:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:00:20] Checking for apptainer binary...
[2025-11-26 08:00:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:00:20] Running /usr/bin/apptainer --version
[2025-11-26 08:00:20] apptainer version 1.4.4-1.el9
[2025-11-26 08:00:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:00:21] c7-2-17.aglt2.org
[2025-11-26 08:00:21] apptainer works
[2025-11-26 08:00:21] Set ATHENA_PROC_NUMBER=8
[2025-11-26 08:00:21] Set ATHENA_CORE_NUMBER=8
[2025-11-26 08:00:21] Starting ATLAS job with PandaID=6896450863
[2025-11-26 08:00:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:01:01]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:01:01] 2025-11-27 03:59:56,737 | INFO     | time since job start (53955s) is within the limit (172800.0s)
[2025-11-26 23:01:01] 2025-11-27 03:59:58,214 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 23:01:01] 2025-11-27 03:59:58,227 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3270.072093750001
[2025-11-26 23:01:01] 2025-11-27 03:59:58,312 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6896450863/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:01:01] 2025-11-27 03:59:58,313 | INFO     | extracted standard info from prmon json
[2025-11-26 23:01:01] 2025-11-27 03:59:58,313 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:01:01] 2025-11-27 03:59:58,313 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:01:01] 2025-11-27 03:59:58,336 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:01:01] 2025-11-27 03:59:58,337 | INFO     | sum of square deviations: 214203532137.70114
[2025-11-26 23:01:01] 2025-11-27 03:59:58,352 | INFO     | sum of deviations: 1001363762514.625
[2025-11-26 23:01:01] 2025-11-27 03:59:58,352 | INFO     | mean x: 1764189011.561086
[2025-11-26 23:01:01] 2025-11-27 03:59:58,352 | INFO     | mean y: 2890629.0995475114
[2025-11-26 23:01:01] 2025-11-27 03:59:58,352 | INFO     | intersect: -8244382087.524507
[2025-11-26 23:01:01] 2025-11-27 03:59:58,353 | INFO     | chi2: 8.290175601153535
[2025-11-26 23:01:01] 2025-11-27 03:59:58,354 | INFO     | sum of square deviations: 210589592317.04
[2025-11-26 23:01:01] 2025-11-27 03:59:58,372 | INFO     | sum of deviations: 1299954256832.1743
[2025-11-26 23:01:01] 2025-11-27 03:59:58,373 | INFO     | mean x: 1764188859.0671217
[2025-11-26 23:01:01] 2025-11-27 03:59:58,373 | INFO     | mean y: 2903231.2343572243
[2025-11-26 23:01:01] 2025-11-27 03:59:58,373 | INFO     | intersect: -10887306450.864126
[2025-11-26 23:01:01] 2025-11-27 03:59:58,374 | INFO     | chi2: 5.098307942933648
[2025-11-26 23:01:01] 2025-11-27 03:59:58,374 | INFO     | current chi2=5.098307942933648 (change=38.501809995143596 %)
[2025-11-26 23:01:01] 2025-11-27 03:59:58,375 | INFO     | sum of square deviations: 207016536983.8139
[2025-11-26 23:01:01] 2025-11-27 03:59:58,398 | INFO     | sum of deviations: 1578268235927.9536
[2025-11-26 23:01:01] 2025-11-27 03:59:58,398 | INFO     | mean x: 1764188706.5732265
[2025-11-26 23:01:01] 2025-11-27 03:59:58,402 | INFO     | mean y: 2915104.938215103
[2025-11-26 23:01:01] 2025-11-27 03:59:58,402 | INFO     | intersect: -13447039368.916433
[2025-11-26 23:01:01] 2025-11-27 03:59:58,403 | INFO     | chi2: 2.195826324057707
[2025-11-26 23:01:01] 2025-11-27 03:59:58,403 | INFO     | current chi2=2.195826324057707 (change=56.93029239041623 %)
[2025-11-26 23:01:01] 2025-11-27 03:59:58,404 | INFO     | sum of square deviations: 203483707060.71774
[2025-11-26 23:01:01] 2025-11-27 03:59:58,434 | INFO     | sum of deviations: 1584642748880.6714
[2025-11-26 23:01:01] 2025-11-27 03:59:58,434 | INFO     | mean x: 1764188554.0701957
[2025-11-26 23:01:01] 2025-11-27 03:59:58,435 | INFO     | mean y: 2915375.8250863063
[2025-11-26 23:01:01] 2025-11-27 03:59:58,435 | INFO     | intersect: -13735818993.85802
[2025-11-26 23:01:01] 2025-11-27 03:59:58,435 | INFO     | chi2: 2.1231380555383086
[2025-11-26 23:01:01] 2025-11-27 03:59:58,436 | INFO     | current chi2=2.1231380555383086 (change=3.31029224502039 %)
[2025-11-26 23:01:01] 2025-11-27 03:59:58,436 | INFO     | right removable region: 868
[2025-11-26 23:01:01] 2025-11-27 03:59:58,436 | INFO     | sum of square deviations: 210589020137.0399
[2025-11-26 23:01:01] 2025-11-27 03:59:58,465 | INFO     | sum of deviations: 786056836872.8799
[2025-11-26 23:01:01] 2025-11-27 03:59:58,465 | INFO     | mean x: 1764189164.0671217
[2025-11-26 23:01:01] 2025-11-27 03:59:58,465 | INFO     | mean y: 2899697.7986348122
[2025-11-26 23:01:01] 2025-11-27 03:59:58,465 | INFO     | intersect: -6582215485.555124
[2025-11-26 23:01:01] 2025-11-27 03:59:58,466 | INFO     | chi2: 6.406784189920038
[2025-11-26 23:01:01] 2025-11-27 03:59:58,466 | INFO     | current chi2=6.406784189920038 (change=22.718353649486424 %)
[2025-11-26 23:01:01] 2025-11-27 03:59:58,466 | INFO     | left removable region: 10
[2025-11-26 23:01:01] 2025-11-27 03:59:58,467 | INFO     | sum of square deviations: 195853386359.26807
[2025-11-26 23:01:01] 2025-11-27 03:59:58,502 | INFO     | sum of deviations: 1308688159935.9414
[2025-11-26 23:01:01] 2025-11-27 03:59:58,503 | INFO     | mean x: 1764188828.5780885
[2025-11-26 23:01:01] 2025-11-27 03:59:58,503 | INFO     | mean y: 2927157.6351981354
[2025-11-26 23:01:01] 2025-11-27 03:59:58,503 | INFO     | intersect: -11785345053.376017
[2025-11-26 23:01:01] 2025-11-27 03:59:58,504 | INFO     | chi2: 0.15431992065118655
[2025-11-26 23:01:01] 2025-11-27 03:59:58,504 | INFO     | current memory leak: 6.68 B/s (using 858 data points, chi2=0.15)
[2025-11-26 23:01:01] 2025-11-27 03:59:58,509 | INFO     | could have reported an average CPU frequency of 3346 MHz (33 samples)
[2025-11-26 23:01:01] 2025-11-27 03:59:58,510 | INFO     | ..............................
[2025-11-26 23:01:01] 2025-11-27 03:59:58,510 | INFO     | . Timing measurements:
[2025-11-26 23:01:01] 2025-11-27 03:59:58,510 | INFO     | . get job = 0 s
[2025-11-26 23:01:01] 2025-11-27 03:59:58,510 | INFO     | . initial setup = 3 s
[2025-11-26 23:01:01] 2025-11-27 03:59:58,510 | INFO     | . payload setup = 9 s
[2025-11-26 23:01:01] 2025-11-27 03:59:58,510 | INFO     | . stage-in = 0 s
[2025-11-26 23:01:01] 2025-11-27 03:59:58,510 | INFO     | . payload execution = 53910 s
[2025-11-26 23:01:01] 2025-11-27 03:59:58,510 | INFO     | . stage-out = 3 s
[2025-11-26 23:01:01] 2025-11-27 03:59:58,510 | INFO     | . log creation = 0 s
[2025-11-26 23:01:01] 2025-11-27 03:59:58,510 | INFO     | ..............................
[2025-11-26 23:01:01] 2025-11-27 03:59:58,744 | INFO     | time since job start (53957s) is within the limit (172800.0s)
[2025-11-26 23:01:01] 2025-11-27 03:59:59,073 | INFO     | 
[2025-11-26 23:01:01] 2025-11-27 03:59:59,073 | INFO     | job summary report
[2025-11-26 23:01:01] 2025-11-27 03:59:59,073 | INFO     | --------------------------------------------------
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | PanDA job id: 6896450863
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | task id: 47556149
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | errors: (none)
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | pilot state: finished 
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | transexitcode: 0
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | exeerrorcode: 0
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | exeerrordiag: 
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | exitcode: 0
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | exitmsg: OK
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | cpuconsumptiontime: 192750 s
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | nevents: 1000
[2025-11-26 23:01:01] 2025-11-27 03:59:59,074 | INFO     | neventsw: 0
[2025-11-26 23:01:01] 2025-11-27 03:59:59,075 | INFO     | pid: 43444
[2025-11-26 23:01:01] 2025-11-27 03:59:59,075 | INFO     | pgrp: 43444
[2025-11-26 23:01:01] 2025-11-27 03:59:59,075 | INFO     | corecount: 8
[2025-11-26 23:01:01] 2025-11-27 03:59:59,075 | INFO     | event service: False
[2025-11-26 23:01:01] 2025-11-27 03:59:59,075 | INFO     | sizes: {0: 2284315, 1: 2284315, 9: 2284605, 11: 2284633, 53924: 2334099, 53925: 2334098, 53930: 2343332, 53939: 2343586}
[2025-11-26 23:01:01] 2025-11-27 03:59:59,075 | INFO     | --------------------------------------------------
[2025-11-26 23:01:01] 2025-11-27 03:59:59,075 | INFO     | 
[2025-11-26 23:01:01] 2025-11-27 03:59:59,075 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-26 23:01:01] 2025-11-27 03:59:59,105 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,105 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,105 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,105 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,105 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,106 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:01:01] 2025-11-27 03:59:59,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,107 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:01:01] 2025-11-27 03:59:59,107 | INFO     | job 6896450863 has completed (purged errors)
[2025-11-26 23:01:01] 2025-11-27 03:59:59,107 | INFO     | overall cleanup function is called
[2025-11-26 23:01:01] 2025-11-27 04:00:00,172 | INFO     | --- collectZombieJob: --- 10, [43444]
[2025-11-26 23:01:01] 2025-11-27 04:00:00,172 | INFO     | zombie collector waiting for pid 43444
[2025-11-26 23:01:01] 2025-11-27 04:00:00,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:01:01] 2025-11-27 04:00:00,173 | INFO     | collected zombie processes
[2025-11-26 23:01:01] 2025-11-27 04:00:00,173 | INFO     | will attempt to kill all subprocesses of pid=43444
[2025-11-26 23:01:01] 2025-11-27 04:00:01,438 | INFO     | process IDs to be killed: [43444] (in reverse order)
[2025-11-26 23:01:01] 2025-11-27 04:00:01,712 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:01:01] 2025-11-27 04:00:01,712 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:01:01] 2025-11-27 04:00:01,820 | INFO     | did not find any defunct processes belonging to 43444
[2025-11-26 23:01:01] 2025-11-27 04:00:01,890 | INFO     | did not find any defunct processes belonging to 43444
[2025-11-26 23:01:01] 2025-11-27 04:00:01,915 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:01:01] 2025-11-27 04:00:01,919 | INFO     | ready for new job
[2025-11-26 23:01:01] 2025-11-27 04:00:01,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:01:01] 2025-11-27 04:00:01,928 | INFO     | ***************************************
[2025-11-26 23:01:01] 2025-11-27 04:00:01,928 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:01:01] 2025-11-27 04:00:01,928 | INFO     | ***************************************
[2025-11-26 23:01:01] 2025-11-27 04:00:01,928 | INFO     | 
[2025-11-26 23:01:01] 2025-11-27 04:00:02,003 | INFO     | architecture information:
[2025-11-26 23:01:01] 2025-11-27 04:00:02,044 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:01:01] 2025-11-27 04:00:02,096 | INFO     | cat /etc/os-release:
[2025-11-26 23:01:01] NAME="CentOS Linux"
[2025-11-26 23:01:01] VERSION="7 (Core)"
[2025-11-26 23:01:01] ID="centos"
[2025-11-26 23:01:01] ID_LIKE="rhel fedora"
[2025-11-26 23:01:01] VERSION_ID="7"
[2025-11-26 23:01:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:01:01] ANSI_COLOR="0;31"
[2025-11-26 23:01:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:01:01] HOME_URL="https://www.centos.org/"
[2025-11-26 23:01:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:01:01] 
[2025-11-26 23:01:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:01:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:01:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:01:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:01:01] 
[2025-11-26 23:01:01] 2025-11-27 04:00:02,096 | INFO     | ***************************************
[2025-11-26 23:01:01] 2025-11-27 04:00:02,600 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-26 23:01:01] 2025-11-27 04:00:02,693 | INFO     | sufficient remaining disk space (117569486848 B)
[2025-11-26 23:01:01] 2025-11-27 04:00:02,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:01:01] 2025-11-27 04:00:02,693 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:01:01] 2025-11-27 04:00:02,693 | INFO     | update_server=False
[2025-11-26 23:01:01] 2025-11-27 04:00:02,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:01:01] 2025-11-27 04:00:02,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:01:01] 2025-11-27 04:00:02,694 | INFO     | aborting loop
[2025-11-26 23:01:01] 2025-11-27 04:00:02,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:01:01] 2025-11-27 04:00:03,302 | INFO     | all payload control threads have been joined
[2025-11-26 23:01:01] 2025-11-27 04:00:03,302 | INFO     | all job control threads have been joined
[2025-11-26 23:01:01] 2025-11-27 04:00:03,557 | INFO     | all data control threads have been joined
[2025-11-26 23:01:01] 2025-11-27 04:00:03,699 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:03,700 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:03,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:01:01] 2025-11-27 04:00:03,851 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:03,893 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:03,894 | INFO     | [job] validate thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:04,009 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:04,309 | INFO     | [payload] control thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:04,310 | INFO     | [job] control thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:04,405 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:04,563 | INFO     | [data] control thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:04,702 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:04,743 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:04,884 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:01:01] 2025-11-27 04:00:05,157 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:05,275 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:08,895 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:12,874 | INFO     | job.realtimelogging is not enabled
[2025-11-26 23:01:01] 2025-11-27 04:00:13,880 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:01:01] 2025-11-27 04:00:17,035 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:01:01] 2025-11-27 04:00:18,041 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139659884943168)>', '<ExcThread(monitor, started 139659543815936)>']
[2025-11-26 23:01:01] 2025-11-27 04:00:23,067 | INFO     | all workflow threads have been joined
[2025-11-26 23:01:01] 2025-11-27 04:00:23,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:01:01] 2025-11-27 04:00:23,068 | INFO     | traces error code: 0
[2025-11-26 23:01:01] 2025-11-27 04:00:23,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:01:01] 2025-11-27 04:00:32,893 | INFO     | PID=33492 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 23:01:01] 2025-11-27 04:00:32,893 | INFO     | .. there are 70 such processes running
[2025-11-26 23:01:01] 2025-11-27 04:00:32,894 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:01:01] 2025-11-27 04:00:32,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:01:01] 2025-11-27 04:00:32,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:01:01] 2025-11-27 04:00:32,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:01:01] 2025-11-27 04:00:32,895 | INFO     | [monitor] control thread has ended
[2025-11-26 23:01:01] 2025-11-27 04:00:33,055 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:01:01] 2025-11-27 04:00:33,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:01:01] 2025-11-27 04:00:33,062 [wrapper] pilotpid: 33492
[2025-11-26 23:01:01] 2025-11-27 04:00:33,064 [wrapper] Pilot exit status: 0
[2025-11-26 23:01:01] 2025-11-27 04:00:33,079 [wrapper] pandaids: 6896450863
[2025-11-26 23:01:01] 2025-11-27 04:00:33,233 [wrapper] cleanup supervisor_pilot 3830242 33493
[2025-11-26 23:01:01] 2025-11-27 04:00:33,238 [wrapper] Test setup, not cleaning
[2025-11-26 23:01:01] 2025-11-27 04:00:33,241 [wrapper] apfmon messages muted
[2025-11-26 23:01:01] 2025-11-27 04:00:33,245 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:01:01] 2025-11-27 04:00:33,247 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:01:01]  *** Error codes and diagnostics ***
[2025-11-26 23:01:01]     "exeErrorCode": 0,
[2025-11-26 23:01:01]     "exeErrorDiag": "",
[2025-11-26 23:01:01]     "pilotErrorCode": 0,
[2025-11-26 23:01:01]     "pilotErrorDiag": "",
[2025-11-26 23:01:01]  *** Listing of results directory ***
[2025-11-26 23:01:01] total 1309608
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-26 23:01:01] -rwx------. 1 boincer umatlas     36292 Nov 24 23:10 runpilot2-wrapper.sh
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 23:10 queuedata.json
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas       100 Nov 26 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:01:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 08:00 run_atlas
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas       105 Nov 26 08:00 job.xml
[2025-11-26 23:01:01] -rw-r--r--. 2 boincer umatlas 410396140 Nov 26 08:00 EVNT.47483658._001502.pool.root.1
[2025-11-26 23:01:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:00 start_atlas.sh
[2025-11-26 23:01:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 08:00 shared
[2025-11-26 23:01:01] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 08:00 input.tar.gz
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas         0 Nov 26 08:00 boinc_lockfile
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 08:00 pandaJob.out
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas        57 Nov 26 08:00 setup.sh.local
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas    991830 Nov 26 08:00 agis_schedconf.cvmfs.json
[2025-11-26 23:01:01] drwx------. 5 boincer umatlas      4096 Nov 26 08:00 pilot3
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas       532 Nov 26 22:47 boinc_task_state.xml
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas 909821210 Nov 26 22:58 HITS.47556149._004889.pool.root.1
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas      1072 Nov 26 22:59 memory_monitor_summary.json
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas   1516240 Nov 26 22:59 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas   2012080 Nov 26 22:59 log.47556149._004889.job.log.tgz.1
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas      8643 Nov 26 22:59 heartbeat.json
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas       821 Nov 26 23:00 pilotlog.txt
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas        95 Nov 26 23:00 pilot_heartbeat.json
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas   6436262 Nov 26 23:00 log.47556149._004889.job.log.1
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas       353 Nov 26 23:00 output.list
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas       620 Nov 26 23:00 runtime_log
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas   8468480 Nov 26 23:00 result.tar.gz
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 23:00 runtime_log.err
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas       663 Nov 26 23:00 pL6KDmMZzh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXJJKDmuUTb9m.diag
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas      6945 Nov 26 23:00 init_data.xml
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas        29 Nov 26 23:00 wrapper_checkpoint.txt
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 23:01 boinc_mmap_file
[2025-11-26 23:01:01] -rw-r--r--. 1 boincer umatlas     21276 Nov 26 23:01 stderr.txt
[2025-11-26 23:01:01] HITS file was successfully produced:
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas 909821210 Nov 26 22:58 shared/HITS.pool.root.1
[2025-11-26 23:01:01]  *** Contents of shared directory: ***
[2025-11-26 23:01:01] total 1298156
[2025-11-26 23:01:01] -rw-r--r--. 2 boincer umatlas 410396140 Nov 26 08:00 ATLAS.root_0
[2025-11-26 23:01:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:00 start_atlas.sh
[2025-11-26 23:01:01] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 08:00 input.tar.gz
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas 909821210 Nov 26 22:58 HITS.pool.root.1
[2025-11-26 23:01:01] -rw-------. 1 boincer umatlas   8468480 Nov 26 23:00 result.tar.gz
23:01:02 (27772): run_atlas exited; CPU time 194591.065541
23:01:02 (27772): called boinc_finish(0)

</stderr_txt>
]]>

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