Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:47:23 (24644): wrapper (7.7.26015): starting
07:47:23 (24644): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 07:47:23] Arguments: --nthreads 8
[2025-11-26 07:47:23] Threads: 8
[2025-11-26 07:47:23] Checking for CVMFS
[2025-11-26 07:47:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 07:47:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 07:47:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 07:47:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 07:47:24] 2.11.2.0 31887 6407 70900 153322 3 81 11818585 20275201 1 130560 0 2186935 99.979 232234 38341 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 07:47:24] CVMFS is ok
[2025-11-26 07:47:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 07:47:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 07:47:24] Further information can be found at the LHC@home message board.
[2025-11-26 07:47:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 07:47:24] Checking for apptainer binary...
[2025-11-26 07:47:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 07:47:24] Running /usr/bin/apptainer --version
[2025-11-26 07:47:24] apptainer version 1.3.2-1.el7
[2025-11-26 07:47:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 07:47:26] c-204-12.aglt2.org
[2025-11-26 07:47:26] apptainer works
[2025-11-26 07:47:26] Set ATHENA_PROC_NUMBER=8
[2025-11-26 07:47:26] Set ATHENA_CORE_NUMBER=8
[2025-11-26 07:47:26] Starting ATLAS job with PandaID=6896450050
[2025-11-26 07:47:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:30:07]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:30:07] 2025-11-27 01:29:22,272 | INFO     | monitor loop #3370: job 0:6896450050 is in state 'finished'
[2025-11-26 20:30:07] 2025-11-27 01:29:22,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:30:07] 2025-11-27 01:29:22,421 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 20:30:07] 2025-11-27 01:29:22,425 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-26 20:30:07] 2025-11-27 01:29:22,428 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896450050/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 20:30:07] 2025-11-27 01:29:22,428 | INFO     | extracted standard info from prmon json
[2025-11-26 20:30:07] 2025-11-27 01:29:22,429 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 20:30:07] 2025-11-27 01:29:22,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 20:30:07] 2025-11-27 01:29:22,443 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:30:07] 2025-11-27 01:29:22,444 | INFO     | sum of square deviations: 130293736595.13782
[2025-11-26 20:30:07] 2025-11-27 01:29:22,455 | INFO     | sum of deviations: 736300267625.909
[2025-11-26 20:30:07] 2025-11-27 01:29:22,455 | INFO     | mean x: 1764184113.5740988
[2025-11-26 20:30:07] 2025-11-27 01:29:22,456 | INFO     | mean y: 2862457.974632844
[2025-11-26 20:30:07] 2025-11-27 01:29:22,456 | INFO     | intersect: -9966682271.579618
[2025-11-26 20:30:07] 2025-11-27 01:29:22,457 | INFO     | chi2: 6.861525621456534
[2025-11-26 20:30:07] 2025-11-27 01:29:22,457 | INFO     | sum of square deviations: 127701893563.47836
[2025-11-26 20:30:07] 2025-11-27 01:29:22,469 | INFO     | sum of deviations: 1008042520161.547
[2025-11-26 20:30:07] 2025-11-27 01:29:22,469 | INFO     | mean x: 1764183961.077957
[2025-11-26 20:30:07] 2025-11-27 01:29:22,469 | INFO     | mean y: 2878448.8870967743
[2025-11-26 20:30:07] 2025-11-27 01:29:22,469 | INFO     | intersect: -13923089260.194733
[2025-11-26 20:30:07] 2025-11-27 01:29:22,470 | INFO     | chi2: 3.182752117119132
[2025-11-26 20:30:07] 2025-11-27 01:29:22,470 | INFO     | current chi2=3.182752117119132 (change=53.61451238823018 %)
[2025-11-26 20:30:07] 2025-11-27 01:29:22,471 | INFO     | sum of square deviations: 125144655831.7972
[2025-11-26 20:30:07] 2025-11-27 01:29:22,483 | INFO     | sum of deviations: 1123327054648.0598
[2025-11-26 20:30:07] 2025-11-27 01:29:22,483 | INFO     | mean x: 1764183808.5818675
[2025-11-26 20:30:07] 2025-11-27 01:29:22,483 | INFO     | mean y: 2885321.8254397833
[2025-11-26 20:30:07] 2025-11-27 01:29:22,483 | INFO     | intersect: -15832832059.631727
[2025-11-26 20:30:07] 2025-11-27 01:29:22,484 | INFO     | chi2: 2.406364844026224
[2025-11-26 20:30:07] 2025-11-27 01:29:22,484 | INFO     | current chi2=2.406364844026224 (change=24.393582802661207 %)
[2025-11-26 20:30:07] 2025-11-27 01:29:22,484 | INFO     | right removable region: 738
[2025-11-26 20:30:07] 2025-11-27 01:29:22,485 | INFO     | sum of square deviations: 127701631263.4784
[2025-11-26 20:30:07] 2025-11-27 01:29:22,497 | INFO     | sum of deviations: 537475841979.1155
[2025-11-26 20:30:07] 2025-11-27 01:29:22,497 | INFO     | mean x: 1764184266.077957
[2025-11-26 20:30:07] 2025-11-27 01:29:22,497 | INFO     | mean y: 2874136.549731183
[2025-11-26 20:30:07] 2025-11-27 01:29:22,497 | INFO     | intersect: -7422296665.381418
[2025-11-26 20:30:07] 2025-11-27 01:29:22,498 | INFO     | chi2: 4.751782494585023
[2025-11-26 20:30:07] 2025-11-27 01:29:22,498 | INFO     | current chi2=4.751782494585023 (change=30.747434947618306 %)
[2025-11-26 20:30:07] 2025-11-27 01:29:22,499 | INFO     | sum of square deviations: 125144222244.11919
[2025-11-26 20:30:07] 2025-11-27 01:29:22,511 | INFO     | sum of deviations: 496375452603.84827
[2025-11-26 20:30:07] 2025-11-27 01:29:22,512 | INFO     | mean x: 1764184418.579161
[2025-11-26 20:30:07] 2025-11-27 01:29:22,512 | INFO     | mean y: 2876585.951285521
[2025-11-26 20:30:07] 2025-11-27 01:29:22,512 | INFO     | intersect: -6994632556.265937
[2025-11-26 20:30:07] 2025-11-27 01:29:22,513 | INFO     | chi2: 4.713781641883124
[2025-11-26 20:30:07] 2025-11-27 01:29:22,513 | INFO     | current chi2=4.713781641883124 (change=0.7997178478855718 %)
[2025-11-26 20:30:07] 2025-11-27 01:29:22,513 | INFO     | left removable region: 20
[2025-11-26 20:30:07] 2025-11-27 01:29:22,514 | INFO     | sum of square deviations: 114776251616.64612
[2025-11-26 20:30:07] 2025-11-27 01:29:22,525 | INFO     | sum of deviations: 849685581355.1189
[2025-11-26 20:30:07] 2025-11-27 01:29:22,525 | INFO     | mean x: 1764184388.086351
[2025-11-26 20:30:07] 2025-11-27 01:29:22,525 | INFO     | mean y: 2904112.675487465
[2025-11-26 20:30:07] 2025-11-27 01:29:22,525 | INFO     | intersect: -13057306656.495283
[2025-11-26 20:30:07] 2025-11-27 01:29:22,526 | INFO     | chi2: 0.12727694954563123
[2025-11-26 20:30:07] 2025-11-27 01:29:22,526 | INFO     | current memory leak: 7.40 B/s (using 718 data points, chi2=0.13)
[2025-11-26 20:30:07] 2025-11-27 01:29:22,527 | INFO     | could have reported an average CPU frequency of 2158 MHz (29 samples)
[2025-11-26 20:30:07] 2025-11-27 01:29:22,527 | INFO     | ..............................
[2025-11-26 20:30:07] 2025-11-27 01:29:22,527 | INFO     | . Timing measurements:
[2025-11-26 20:30:07] 2025-11-27 01:29:22,527 | INFO     | . get job = 0 s
[2025-11-26 20:30:07] 2025-11-27 01:29:22,527 | INFO     | . initial setup = 2 s
[2025-11-26 20:30:07] 2025-11-27 01:29:22,528 | INFO     | . payload setup = 9 s
[2025-11-26 20:30:07] 2025-11-27 01:29:22,528 | INFO     | . stage-in = 0 s
[2025-11-26 20:30:07] 2025-11-27 01:29:22,528 | INFO     | . payload execution = 45650 s
[2025-11-26 20:30:07] 2025-11-27 01:29:22,528 | INFO     | . stage-out = 3 s
[2025-11-26 20:30:07] 2025-11-27 01:29:22,528 | INFO     | . log creation = 0 s
[2025-11-26 20:30:07] 2025-11-27 01:29:22,528 | INFO     | ..............................
[2025-11-26 20:30:07] 2025-11-27 01:29:22,629 | INFO     | 
[2025-11-26 20:30:07] 2025-11-27 01:29:22,629 | INFO     | job summary report
[2025-11-26 20:30:07] 2025-11-27 01:29:22,630 | INFO     | --------------------------------------------------
[2025-11-26 20:30:07] 2025-11-27 01:29:22,630 | INFO     | PanDA job id: 6896450050
[2025-11-26 20:30:07] 2025-11-27 01:29:22,630 | INFO     | task id: 47556149
[2025-11-26 20:30:07] 2025-11-27 01:29:22,630 | INFO     | errors: (none)
[2025-11-26 20:30:07] 2025-11-27 01:29:22,630 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:30:07] 2025-11-27 01:29:22,631 | INFO     | pilot state: finished 
[2025-11-26 20:30:07] 2025-11-27 01:29:22,631 | INFO     | transexitcode: 0
[2025-11-26 20:30:07] 2025-11-27 01:29:22,631 | INFO     | exeerrorcode: 0
[2025-11-26 20:30:07] 2025-11-27 01:29:22,631 | INFO     | exeerrordiag: 
[2025-11-26 20:30:07] 2025-11-27 01:29:22,631 | INFO     | exitcode: 0
[2025-11-26 20:30:07] 2025-11-27 01:29:22,631 | INFO     | exitmsg: OK
[2025-11-26 20:30:07] 2025-11-27 01:29:22,632 | INFO     | cpuconsumptiontime: 352426 s
[2025-11-26 20:30:07] 2025-11-27 01:29:22,632 | INFO     | nevents: 1000
[2025-11-26 20:30:07] 2025-11-27 01:29:22,632 | INFO     | neventsw: 0
[2025-11-26 20:30:07] 2025-11-27 01:29:22,632 | INFO     | pid: 2814
[2025-11-26 20:30:07] 2025-11-27 01:29:22,632 | INFO     | pgrp: 2814
[2025-11-26 20:30:07] 2025-11-27 01:29:22,632 | INFO     | corecount: 8
[2025-11-26 20:30:07] 2025-11-27 01:29:22,633 | INFO     | event service: False
[2025-11-26 20:30:07] 2025-11-27 01:29:22,633 | INFO     | sizes: {0: 2284143, 1: 2284342, 7: 2284604, 12: 2284632, 45664: 2330861, 45668: 2339855, 45671: 2340039, 45680: 2340285}
[2025-11-26 20:30:07] 2025-11-27 01:29:22,633 | INFO     | --------------------------------------------------
[2025-11-26 20:30:07] 2025-11-27 01:29:22,633 | INFO     | 
[2025-11-26 20:30:07] 2025-11-27 01:29:22,633 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 20:30:07] 2025-11-27 01:29:22,660 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,661 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,661 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,661 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,661 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,662 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:30:07] 2025-11-27 01:29:22,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:30:07] 2025-11-27 01:29:22,665 | INFO     | job 6896450050 has completed (purged errors)
[2025-11-26 20:30:07] 2025-11-27 01:29:22,665 | INFO     | overall cleanup function is called
[2025-11-26 20:30:07] 2025-11-27 01:29:23,679 | INFO     | --- collectZombieJob: --- 10, [2814]
[2025-11-26 20:30:07] 2025-11-27 01:29:23,680 | INFO     | zombie collector waiting for pid 2814
[2025-11-26 20:30:07] 2025-11-27 01:29:23,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:30:07] 2025-11-27 01:29:23,680 | INFO     | collected zombie processes
[2025-11-26 20:30:07] 2025-11-27 01:29:23,680 | INFO     | will attempt to kill all subprocesses of pid=2814
[2025-11-26 20:30:07] 2025-11-27 01:29:23,771 | INFO     | process IDs to be killed: [2814] (in reverse order)
[2025-11-26 20:30:07] 2025-11-27 01:29:23,829 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:30:07] 2025-11-27 01:29:23,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:30:07] 2025-11-27 01:29:23,834 | INFO     | did not find any defunct processes belonging to 2814
[2025-11-26 20:30:07] 2025-11-27 01:29:23,838 | INFO     | did not find any defunct processes belonging to 2814
[2025-11-26 20:30:07] 2025-11-27 01:29:23,840 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:30:07] 2025-11-27 01:29:23,841 | INFO     | ready for new job
[2025-11-26 20:30:07] 2025-11-27 01:29:23,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:30:07] 2025-11-27 01:29:23,844 | INFO     | ***************************************
[2025-11-26 20:30:07] 2025-11-27 01:29:23,844 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:30:07] 2025-11-27 01:29:23,844 | INFO     | ***************************************
[2025-11-26 20:30:07] 2025-11-27 01:29:23,844 | INFO     | 
[2025-11-26 20:30:07] 2025-11-27 01:29:23,845 | INFO     | architecture information:
[2025-11-26 20:30:07] 2025-11-27 01:29:23,846 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:30:07] 2025-11-27 01:29:23,867 | INFO     | cat /etc/os-release:
[2025-11-26 20:30:07] NAME="CentOS Linux"
[2025-11-26 20:30:07] VERSION="7 (Core)"
[2025-11-26 20:30:07] ID="centos"
[2025-11-26 20:30:07] ID_LIKE="rhel fedora"
[2025-11-26 20:30:07] VERSION_ID="7"
[2025-11-26 20:30:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:30:07] ANSI_COLOR="0;31"
[2025-11-26 20:30:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:30:07] HOME_URL="https://www.centos.org/"
[2025-11-26 20:30:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:30:07] 
[2025-11-26 20:30:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:30:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:30:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:30:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:30:07] 
[2025-11-26 20:30:07] 2025-11-27 01:29:23,868 | INFO     | ***************************************
[2025-11-26 20:30:07] 2025-11-27 01:29:24,371 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 20:30:07] 2025-11-27 01:29:24,393 | INFO     | sufficient remaining disk space (17467179008 B)
[2025-11-26 20:30:07] 2025-11-27 01:29:24,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:30:07] 2025-11-27 01:29:24,394 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:30:07] 2025-11-27 01:29:24,394 | INFO     | update_server=False
[2025-11-26 20:30:07] 2025-11-27 01:29:24,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:30:07] 2025-11-27 01:29:24,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:30:07] 2025-11-27 01:29:24,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:30:07] 2025-11-27 01:29:24,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:30:07] 2025-11-27 01:29:24,592 | INFO     | all data control threads have been joined
[2025-11-26 20:30:07] 2025-11-27 01:29:24,776 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 20:30:07] 2025-11-27 01:29:24,776 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 20:30:07] 2025-11-27 01:29:24,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:30:07] 2025-11-27 01:29:24,777 | INFO     | will abort loop
[2025-11-26 20:30:07] 2025-11-27 01:29:24,927 | INFO     | all job control threads have been joined
[2025-11-26 20:30:07] 2025-11-27 01:29:25,396 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:25,400 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:25,507 | INFO     | all payload control threads have been joined
[2025-11-26 20:30:07] 2025-11-27 01:29:25,537 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:25,598 | INFO     | [data] control thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:25,599 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:25,782 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:25,933 | INFO     | [job] control thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:26,101 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:26,256 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:26,306 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:26,309 | INFO     | [job] validate thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:26,400 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:26,510 | INFO     | [payload] control thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:26,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:26,942 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:28,419 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:30:07] 2025-11-27 01:29:54,041 | INFO     | PID=28685 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 20:30:07] 2025-11-27 01:29:54,041 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:30:07] 2025-11-27 01:29:54,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:30:07] 2025-11-27 01:29:54,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:30:07] 2025-11-27 01:30:01,564 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:30:07] 2025-11-27 01:30:02,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183189509952)>', '<ExcThread(monitor, started 140182615480064)>']
[2025-11-26 20:30:07] 2025-11-27 01:30:03,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:30:07] 2025-11-27 01:30:03,078 | INFO     | [monitor] control thread has ended
[2025-11-26 20:30:07] 2025-11-27 01:30:07,172 | INFO     | all workflow threads have been joined
[2025-11-26 20:30:07] 2025-11-27 01:30:07,173 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:30:07] 2025-11-27 01:30:07,175 | INFO     | traces error code: 0
[2025-11-26 20:30:07] 2025-11-27 01:30:07,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:30:07] 2025-11-27 01:30:07,289 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:30:07] 2025-11-27 01:30:07,295 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:30:07] 2025-11-27 01:30:07,300 [wrapper] pilotpid: 28685
[2025-11-26 20:30:07] 2025-11-27 01:30:07,304 [wrapper] Pilot exit status: 0
[2025-11-26 20:30:07] 2025-11-27 01:30:07,322 [wrapper] pandaids: 6896450050
[2025-11-26 20:30:07] 2025-11-27 01:30:07,375 [wrapper] cleanup supervisor_pilot  8785 28686
[2025-11-26 20:30:07] 2025-11-27 01:30:07,381 [wrapper] Test setup, not cleaning
[2025-11-26 20:30:07] 2025-11-27 01:30:07,386 [wrapper] apfmon messages muted
[2025-11-26 20:30:07] 2025-11-27 01:30:07,392 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:30:07] 2025-11-27 01:30:07,397 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:30:07]  *** Error codes and diagnostics ***
[2025-11-26 20:30:07]     "exeErrorCode": 0,
[2025-11-26 20:30:07]     "exeErrorDiag": "",
[2025-11-26 20:30:07]     "pilotErrorCode": 0,
[2025-11-26 20:30:07]     "pilotErrorDiag": "",
[2025-11-26 20:30:07]  *** Listing of results directory ***
[2025-11-26 20:30:07] total 1318296
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 22:04 pilot3.tar.gz
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 22:30 queuedata.json
[2025-11-26 20:30:07] -rwx------ 1 boincer umatlas     36292 Nov 24 22:35 runpilot2-wrapper.sh
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas       100 Nov 26 07:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:30:07] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 07:47 run_atlas
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas       105 Nov 26 07:47 job.xml
[2025-11-26 20:30:07] -rw-r--r-- 2 boincer umatlas 411324147 Nov 26 07:47 EVNT.47483658._001493.pool.root.1
[2025-11-26 20:30:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 07:47 start_atlas.sh
[2025-11-26 20:30:07] drwxrwx--x 2 boincer umatlas      4096 Nov 26 07:47 shared
[2025-11-26 20:30:07] -rw-r--r-- 2 boincer umatlas    590112 Nov 26 07:47 input.tar.gz
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas         0 Nov 26 07:47 boinc_lockfile
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 07:47 pandaJob.out
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas        57 Nov 26 07:47 setup.sh.local
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas    991830 Nov 26 07:47 agis_schedconf.cvmfs.json
[2025-11-26 20:30:07] drwx------ 5 boincer umatlas      4096 Nov 26 07:47 pilot3
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas       533 Nov 26 20:16 boinc_task_state.xml
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas 918105022 Nov 26 20:28 HITS.47556149._004795.pool.root.1
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas        95 Nov 26 20:28 pilot_heartbeat.json
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas      1062 Nov 26 20:29 memory_monitor_summary.json
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas   1516240 Nov 26 20:29 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas   1995852 Nov 26 20:29 log.47556149._004795.job.log.tgz.1
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas      8657 Nov 26 20:29 heartbeat.json
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas      5913 Nov 26 20:29 init_data.xml
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 20:30 boinc_mmap_file
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas        29 Nov 26 20:30 wrapper_checkpoint.txt
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas      4932 Nov 26 20:30 pilotlog.txt
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas   6295012 Nov 26 20:30 log.47556149._004795.job.log.1
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas       353 Nov 26 20:30 output.list
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas       620 Nov 26 20:30 runtime_log
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas   8314880 Nov 26 20:30 result.tar.gz
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas      9343 Nov 26 20:30 runtime_log.err
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas       668 Nov 26 20:30 61qKDmx0yh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnIJKDmEmaFBo.diag
[2025-11-26 20:30:07] -rw-r--r-- 1 boincer umatlas     21287 Nov 26 20:30 stderr.txt
[2025-11-26 20:30:07] HITS file was successfully produced:
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas 918105022 Nov 26 20:28 shared/HITS.pool.root.1
[2025-11-26 20:30:07]  *** Contents of shared directory: ***
[2025-11-26 20:30:07] total 1306996
[2025-11-26 20:30:07] -rw-r--r-- 2 boincer umatlas 411324147 Nov 26 07:47 ATLAS.root_0
[2025-11-26 20:30:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 07:47 start_atlas.sh
[2025-11-26 20:30:07] -rw-r--r-- 2 boincer umatlas    590112 Nov 26 07:47 input.tar.gz
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas 918105022 Nov 26 20:28 HITS.pool.root.1
[2025-11-26 20:30:07] -rw------- 1 boincer umatlas   8314880 Nov 26 20:30 result.tar.gz
20:30:08 (24644): run_atlas exited; CPU time 348418.385046
20:30:08 (24644): called boinc_finish(0)

</stderr_txt>
]]>

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