Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:21:49 (1661810): wrapper (7.7.26015): starting
08:21:49 (1661810): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 08:21:49] Arguments: --nthreads 8
[2025-11-26 08:21:49] Threads: 8
[2025-11-26 08:21:49] Checking for CVMFS
[2025-11-26 08:21:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:21:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:21:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:21:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:21:50] 2.13.3.0 12525 29968 223992 153323 1 273 29396542 40960001 46041 16776704 0 233658952 99.716 181975890 35562 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 08:21:50] CVMFS is ok
[2025-11-26 08:21:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:21:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:21:50] Further information can be found at the LHC@home message board.
[2025-11-26 08:21:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:21:50] Checking for apptainer binary...
[2025-11-26 08:21:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:21:50] Running /usr/bin/apptainer --version
[2025-11-26 08:21:50] apptainer version 1.4.4-1.el9
[2025-11-26 08:21:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:21:50] c7-4-30.aglt2.org
[2025-11-26 08:21:50] apptainer works
[2025-11-26 08:21:50] Set ATHENA_PROC_NUMBER=8
[2025-11-26 08:21:50] Set ATHENA_CORE_NUMBER=8
[2025-11-26 08:21:50] Starting ATLAS job with PandaID=6896450838
[2025-11-26 08:21:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:48:30]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:48:30] 2025-11-27 01:47:30,074 | INFO     | monitor loop #2713: job 0:6896450838 is in state 'finished'
[2025-11-26 20:48:30] 2025-11-27 01:47:30,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,112 | INFO     | time since job start (44724s) is within the limit (172800.0s)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,306 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 20:48:30] 2025-11-27 01:47:30,311 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3169.2533020833325
[2025-11-26 20:48:30] 2025-11-27 01:47:30,326 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6896450838/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,326 | INFO     | extracted standard info from prmon json
[2025-11-26 20:48:30] 2025-11-27 01:47:30,327 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 20:48:30] 2025-11-27 01:47:30,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 20:48:30] 2025-11-27 01:47:30,336 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:48:30] 2025-11-27 01:47:30,337 | INFO     | sum of square deviations: 122122301736.20187
[2025-11-26 20:48:30] 2025-11-27 01:47:30,347 | INFO     | sum of deviations: 995932771266.9414
[2025-11-26 20:48:30] 2025-11-27 01:47:30,347 | INFO     | mean x: 1764185686.6848567
[2025-11-26 20:48:30] 2025-11-27 01:47:30,347 | INFO     | mean y: 2853808.6793997274
[2025-11-26 20:48:30] 2025-11-27 01:47:30,347 | INFO     | intersect: -14384447404.860321
[2025-11-26 20:48:30] 2025-11-27 01:47:30,348 | INFO     | chi2: 5.132430447156821
[2025-11-26 20:48:30] 2025-11-27 01:47:30,348 | INFO     | sum of square deviations: 119640399003.84055
[2025-11-26 20:48:30] 2025-11-27 01:47:30,358 | INFO     | sum of deviations: 1213678924418.042
[2025-11-26 20:48:30] 2025-11-27 01:47:30,358 | INFO     | mean x: 1764185534.1895604
[2025-11-26 20:48:30] 2025-11-27 01:47:30,358 | INFO     | mean y: 2867176.8475274723
[2025-11-26 20:48:30] 2025-11-27 01:47:30,358 | INFO     | intersect: -17893719757.30606
[2025-11-26 20:48:30] 2025-11-27 01:47:30,359 | INFO     | chi2: 2.4929157406476046
[2025-11-26 20:48:30] 2025-11-27 01:47:30,359 | INFO     | current chi2=2.4929157406476046 (change=51.42816320036857 %)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,359 | INFO     | sum of square deviations: 117192313085.83429
[2025-11-26 20:48:30] 2025-11-27 01:47:30,368 | INFO     | sum of deviations: 1237167380984.3687
[2025-11-26 20:48:30] 2025-11-27 01:47:30,369 | INFO     | mean x: 1764185381.692946
[2025-11-26 20:48:30] 2025-11-27 01:47:30,369 | INFO     | mean y: 2868629.0331950206
[2025-11-26 20:48:30] 2025-11-27 01:47:30,369 | INFO     | intersect: -18621156708.203648
[2025-11-26 20:48:30] 2025-11-27 01:47:30,370 | INFO     | chi2: 2.2857231359957257
[2025-11-26 20:48:30] 2025-11-27 01:47:30,370 | INFO     | current chi2=2.2857231359957257 (change=8.31125582279226 %)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,370 | INFO     | right removable region: 722
[2025-11-26 20:48:30] 2025-11-27 01:47:30,370 | INFO     | sum of square deviations: 119640137253.2185
[2025-11-26 20:48:30] 2025-11-27 01:47:30,377 | INFO     | sum of deviations: 815574263478.8673
[2025-11-26 20:48:30] 2025-11-27 01:47:30,377 | INFO     | mean x: 1764185839.188187
[2025-11-26 20:48:30] 2025-11-27 01:47:30,377 | INFO     | mean y: 2864864.8914835164
[2025-11-26 20:48:30] 2025-11-27 01:47:30,377 | INFO     | intersect: -12023404909.360605
[2025-11-26 20:48:30] 2025-11-27 01:47:30,378 | INFO     | chi2: 3.0461792476877845
[2025-11-26 20:48:30] 2025-11-27 01:47:30,378 | INFO     | current chi2=3.0461792476877845 (change=40.64840665546171 %)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,378 | INFO     | sum of square deviations: 117191922808.97917
[2025-11-26 20:48:30] 2025-11-27 01:47:30,383 | INFO     | sum of deviations: 770636413218.9084
[2025-11-26 20:48:30] 2025-11-27 01:47:30,384 | INFO     | mean x: 1764185991.6887968
[2025-11-26 20:48:30] 2025-11-27 01:47:30,384 | INFO     | mean y: 2867662.9640387273
[2025-11-26 20:48:30] 2025-11-27 01:47:30,384 | INFO     | intersect: -11598153399.742937
[2025-11-26 20:48:30] 2025-11-27 01:47:30,384 | INFO     | chi2: 3.0077998169749742
[2025-11-26 20:48:30] 2025-11-27 01:47:30,384 | INFO     | current chi2=3.0077998169749742 (change=1.2599202998951005 %)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,384 | INFO     | left removable region: 20
[2025-11-26 20:48:30] 2025-11-27 01:47:30,384 | INFO     | sum of square deviations: 107274136387.87036
[2025-11-26 20:48:30] 2025-11-27 01:47:30,390 | INFO     | sum of deviations: 947682382756.3898
[2025-11-26 20:48:30] 2025-11-27 01:47:30,390 | INFO     | mean x: 1764185961.2037036
[2025-11-26 20:48:30] 2025-11-27 01:47:30,390 | INFO     | mean y: 2886694.158119658
[2025-11-26 20:48:30] 2025-11-27 01:47:30,390 | INFO     | intersect: -15582304775.422804
[2025-11-26 20:48:30] 2025-11-27 01:47:30,390 | INFO     | chi2: 0.13026508092341252
[2025-11-26 20:48:30] 2025-11-27 01:47:30,390 | INFO     | current memory leak: 8.83 B/s (using 702 data points, chi2=0.13)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,391 | INFO     | could have reported an average CPU frequency of 3089 MHz (28 samples)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,391 | INFO     | ..............................
[2025-11-26 20:48:30] 2025-11-27 01:47:30,391 | INFO     | . Timing measurements:
[2025-11-26 20:48:30] 2025-11-27 01:47:30,391 | INFO     | . get job = 0 s
[2025-11-26 20:48:30] 2025-11-27 01:47:30,391 | INFO     | . initial setup = 2 s
[2025-11-26 20:48:30] 2025-11-27 01:47:30,391 | INFO     | . payload setup = 8 s
[2025-11-26 20:48:30] 2025-11-27 01:47:30,391 | INFO     | . stage-in = 0 s
[2025-11-26 20:48:30] 2025-11-27 01:47:30,391 | INFO     | . payload execution = 44680 s
[2025-11-26 20:48:30] 2025-11-27 01:47:30,391 | INFO     | . stage-out = 3 s
[2025-11-26 20:48:30] 2025-11-27 01:47:30,391 | INFO     | . log creation = 0 s
[2025-11-26 20:48:30] 2025-11-27 01:47:30,391 | INFO     | ..............................
[2025-11-26 20:48:30] 2025-11-27 01:47:30,456 | INFO     | 
[2025-11-26 20:48:30] 2025-11-27 01:47:30,456 | INFO     | job summary report
[2025-11-26 20:48:30] 2025-11-27 01:47:30,456 | INFO     | --------------------------------------------------
[2025-11-26 20:48:30] 2025-11-27 01:47:30,456 | INFO     | PanDA job id: 6896450838
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | task id: 47556149
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | errors: (none)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | pilot state: finished 
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | transexitcode: 0
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | exeerrorcode: 0
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | exeerrordiag: 
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | exitcode: 0
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | exitmsg: OK
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | cpuconsumptiontime: 195970 s
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | nevents: 1000
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | neventsw: 0
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | pid: 1673655
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | pgrp: 1673655
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | corecount: 8
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | event service: False
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | sizes: {0: 2284144, 1: 2284343, 7: 2284605, 12: 2284633, 44693: 2330540, 44696: 2339534, 44699: 2339718, 44706: 2339964}
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | --------------------------------------------------
[2025-11-26 20:48:30] 2025-11-27 01:47:30,457 | INFO     | 
[2025-11-26 20:48:30] 2025-11-27 01:47:30,458 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 20:48:30] 2025-11-27 01:47:30,488 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:48:30] 2025-11-27 01:47:30,496 | INFO     | job 6896450838 has completed (purged errors)
[2025-11-26 20:48:30] 2025-11-27 01:47:30,497 | INFO     | overall cleanup function is called
[2025-11-26 20:48:30] 2025-11-27 01:47:31,526 | INFO     | --- collectZombieJob: --- 10, [1673655]
[2025-11-26 20:48:30] 2025-11-27 01:47:31,526 | INFO     | zombie collector waiting for pid 1673655
[2025-11-26 20:48:30] 2025-11-27 01:47:31,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:48:30] 2025-11-27 01:47:31,527 | INFO     | collected zombie processes
[2025-11-26 20:48:30] 2025-11-27 01:47:31,527 | INFO     | will attempt to kill all subprocesses of pid=1673655
[2025-11-26 20:48:30] 2025-11-27 01:47:32,152 | INFO     | process IDs to be killed: [1673655] (in reverse order)
[2025-11-26 20:48:30] 2025-11-27 01:47:32,397 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:48:30] 2025-11-27 01:47:32,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:48:30] 2025-11-27 01:47:32,443 | INFO     | did not find any defunct processes belonging to 1673655
[2025-11-26 20:48:30] 2025-11-27 01:47:32,468 | INFO     | did not find any defunct processes belonging to 1673655
[2025-11-26 20:48:30] 2025-11-27 01:47:32,469 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:48:30] 2025-11-27 01:47:32,469 | INFO     | ready for new job
[2025-11-26 20:48:30] 2025-11-27 01:47:32,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:48:30] 2025-11-27 01:47:32,472 | INFO     | ***************************************
[2025-11-26 20:48:30] 2025-11-27 01:47:32,473 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:48:30] 2025-11-27 01:47:32,473 | INFO     | ***************************************
[2025-11-26 20:48:30] 2025-11-27 01:47:32,473 | INFO     | 
[2025-11-26 20:48:30] 2025-11-27 01:47:32,478 | INFO     | architecture information:
[2025-11-26 20:48:30] 2025-11-27 01:47:32,478 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:48:30] 2025-11-27 01:47:32,493 | INFO     | cat /etc/os-release:
[2025-11-26 20:48:30] NAME="CentOS Linux"
[2025-11-26 20:48:30] VERSION="7 (Core)"
[2025-11-26 20:48:30] ID="centos"
[2025-11-26 20:48:30] ID_LIKE="rhel fedora"
[2025-11-26 20:48:30] VERSION_ID="7"
[2025-11-26 20:48:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:48:30] ANSI_COLOR="0;31"
[2025-11-26 20:48:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:48:30] HOME_URL="https://www.centos.org/"
[2025-11-26 20:48:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:48:30] 
[2025-11-26 20:48:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:48:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:48:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:48:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:48:30] 
[2025-11-26 20:48:30] 2025-11-27 01:47:32,494 | INFO     | ***************************************
[2025-11-26 20:48:30] 2025-11-27 01:47:32,997 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 20:48:30] 2025-11-27 01:47:33,023 | INFO     | sufficient remaining disk space (119110893568 B)
[2025-11-26 20:48:30] 2025-11-27 01:47:33,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:48:30] 2025-11-27 01:47:33,024 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:48:30] 2025-11-27 01:47:33,027 | INFO     | update_server=False
[2025-11-26 20:48:30] 2025-11-27 01:47:33,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:48:30] 2025-11-27 01:47:33,208 | INFO     | all data control threads have been joined
[2025-11-26 20:48:30] 2025-11-27 01:47:33,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:48:30] 2025-11-27 01:47:33,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:48:30] 2025-11-27 01:47:33,588 | INFO     | aborting loop
[2025-11-26 20:48:30] 2025-11-27 01:47:33,680 | INFO     | all payload control threads have been joined
[2025-11-26 20:48:30] 2025-11-27 01:47:33,873 | INFO     | all job control threads have been joined
[2025-11-26 20:48:30] 2025-11-27 01:47:34,032 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:34,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:48:30] 2025-11-27 01:47:34,213 | INFO     | [data] control thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:34,368 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:34,369 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:34,594 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:34,605 | INFO     | [job] validate thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:34,636 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:34,672 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:34,686 | INFO     | [payload] control thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:34,878 | INFO     | [job] control thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:35,312 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:35,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:48:30] 2025-11-27 01:47:35,522 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:35,531 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:35,574 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:36,479 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:47:38,107 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:48:30] 2025-11-27 01:48:03,981 | INFO     | PID=1665551 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:48:30] 2025-11-27 01:48:03,982 | INFO     | .. there are 55 such processes running
[2025-11-26 20:48:30] 2025-11-27 01:48:03,982 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:48:30] 2025-11-27 01:48:03,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:48:30] 2025-11-27 01:48:03,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:48:30] 2025-11-27 01:48:24,336 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:48:30] 2025-11-27 01:48:25,342 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139965249795904)>', '<ExcThread(monitor, started 139964318738176)>']
[2025-11-26 20:48:30] 2025-11-27 01:48:26,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:48:30] 2025-11-27 01:48:26,104 | INFO     | [monitor] control thread has ended
[2025-11-26 20:48:30] 2025-11-27 01:48:30,368 | INFO     | all workflow threads have been joined
[2025-11-26 20:48:30] 2025-11-27 01:48:30,368 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:48:30] 2025-11-27 01:48:30,369 | INFO     | traces error code: 0
[2025-11-26 20:48:30] 2025-11-27 01:48:30,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:48:30] 2025-11-27 01:48:30,581 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:48:30] 2025-11-27 01:48:30,583 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:48:30] 2025-11-27 01:48:30,585 [wrapper] pilotpid: 1665551
[2025-11-26 20:48:30] 2025-11-27 01:48:30,587 [wrapper] Pilot exit status: 0
[2025-11-26 20:48:30] 2025-11-27 01:48:30,594 [wrapper] pandaids: 6896450838
[2025-11-26 20:48:30] 2025-11-27 01:48:30,726 [wrapper] cleanup supervisor_pilot 1859609 1665552
[2025-11-26 20:48:30] 2025-11-27 01:48:30,730 [wrapper] Test setup, not cleaning
[2025-11-26 20:48:30] 2025-11-27 01:48:30,749 [wrapper] apfmon messages muted
[2025-11-26 20:48:30] 2025-11-27 01:48:30,771 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:48:30] 2025-11-27 01:48:30,775 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:48:30]  *** Error codes and diagnostics ***
[2025-11-26 20:48:30]     "exeErrorCode": 0,
[2025-11-26 20:48:30]     "exeErrorDiag": "",
[2025-11-26 20:48:30]     "pilotErrorCode": 0,
[2025-11-26 20:48:30]     "pilotErrorDiag": "",
[2025-11-26 20:48:30]  *** Listing of results directory ***
[2025-11-26 20:48:30] total 1314364
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 22:04 pilot3.tar.gz
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 23:02 queuedata.json
[2025-11-26 20:48:30] -rwx------. 1 boincer umatlas     36292 Nov 24 23:04 runpilot2-wrapper.sh
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas       100 Nov 26 08:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:48:30] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 08:21 run_atlas
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas       105 Nov 26 08:21 job.xml
[2025-11-26 20:48:30] -rw-r--r--. 2 boincer umatlas 408476508 Nov 26 08:21 EVNT.47483658._001500.pool.root.1
[2025-11-26 20:48:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:21 start_atlas.sh
[2025-11-26 20:48:30] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 08:21 shared
[2025-11-26 20:48:30] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 08:21 input.tar.gz
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas         0 Nov 26 08:21 boinc_lockfile
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 08:21 pandaJob.out
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas        57 Nov 26 08:21 setup.sh.local
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas    991830 Nov 26 08:22 agis_schedconf.cvmfs.json
[2025-11-26 20:48:30] drwx------. 5 boincer umatlas      4096 Nov 26 08:22 pilot3
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas       533 Nov 26 20:39 boinc_task_state.xml
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas 918230010 Nov 26 20:46 HITS.47556149._004864.pool.root.1
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas      1071 Nov 26 20:47 memory_monitor_summary.json
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:47 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas   1941910 Nov 26 20:47 log.47556149._004864.job.log.tgz.1
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas      8628 Nov 26 20:47 heartbeat.json
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas      6949 Nov 26 20:48 init_data.xml
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas        95 Nov 26 20:48 pilot_heartbeat.json
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 20:48 boinc_mmap_file
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas        29 Nov 26 20:48 wrapper_checkpoint.txt
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas      4825 Nov 26 20:48 pilotlog.txt
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas   5693446 Nov 26 20:48 log.47556149._004864.job.log.1
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas       353 Nov 26 20:48 output.list
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:48 runtime_log
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas   7659520 Nov 26 20:48 result.tar.gz
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 20:48 runtime_log.err
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas       664 Nov 26 20:48 bE6MDmYTzh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmS6LKDmfZ1DQm.diag
[2025-11-26 20:48:30] -rw-r--r--. 1 boincer umatlas     21351 Nov 26 20:48 stderr.txt
[2025-11-26 20:48:30] HITS file was successfully produced:
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas 918230010 Nov 26 20:46 shared/HITS.pool.root.1
[2025-11-26 20:48:30]  *** Contents of shared directory: ***
[2025-11-26 20:48:30] total 1303700
[2025-11-26 20:48:30] -rw-r--r--. 2 boincer umatlas 408476508 Nov 26 08:21 ATLAS.root_0
[2025-11-26 20:48:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:21 start_atlas.sh
[2025-11-26 20:48:30] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 08:21 input.tar.gz
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas 918230010 Nov 26 20:46 HITS.pool.root.1
[2025-11-26 20:48:30] -rw-------. 1 boincer umatlas   7659520 Nov 26 20:48 result.tar.gz
20:48:32 (1661810): run_atlas exited; CPU time 196801.497436
20:48:32 (1661810): called boinc_finish(0)

</stderr_txt>
]]>

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