Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
06:05:13 (699120): wrapper (7.7.26015): starting
06:05:13 (699120): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 06:05:13] Arguments: --nthreads 4
[2025-11-26 06:05:13] Threads: 4
[2025-11-26 06:05:13] Checking for CVMFS
[2025-11-26 06:05:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 06:05:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 06:05:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 06:05:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 06:05:13] 2.13.2.0 774864 4225 60480 153322 0 90 3035419 4096000 5100 130560 0 12475280 99.952 566292 1337 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 06:05:13] CVMFS is ok
[2025-11-26 06:05:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 06:05:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 06:05:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 06:05:13] Further information can be found at the LHC@home message board.
[2025-11-26 06:05:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 06:05:13] Checking for apptainer binary...
[2025-11-26 06:05:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 06:05:13] Running /usr/bin/apptainer --version
[2025-11-26 06:05:13] apptainer version 1.4.3
[2025-11-26 06:05:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 06:05:13] msi670e
[2025-11-26 06:05:13] apptainer works
[2025-11-26 06:05:13] Set ATHENA_PROC_NUMBER=4
[2025-11-26 06:05:13] Set ATHENA_CORE_NUMBER=4
[2025-11-26 06:05:13] Starting ATLAS job with PandaID=6896420944
[2025-11-26 06:05:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 12:56:07]  *** The last 200 lines of the pilot log: ***
[2025-11-26 12:56:07] 2025-11-26 19:55:19,532 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-26 12:56:07] 2025-11-26 19:55:21,290 | INFO     | time since job start (24600s) is within the limit (172800.0s)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,309 | INFO     | monitor loop #1863: job 0:6896420944 is in state 'finished'
[2025-11-26 12:56:07] 2025-11-26 19:55:21,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,393 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 12:56:07] 2025-11-26 19:55:21,395 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4972.901812499999
[2025-11-26 12:56:07] 2025-11-26 19:55:21,398 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6896420944/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,399 | INFO     | extracted standard info from prmon json
[2025-11-26 12:56:07] 2025-11-26 19:55:21,399 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 12:56:07] 2025-11-26 19:55:21,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 12:56:07] 2025-11-26 19:55:21,402 | INFO     | fitting pss+swap vs Time
[2025-11-26 12:56:07] 2025-11-26 19:55:21,402 | INFO     | sum of square deviations: 20295085642.0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,404 | INFO     | sum of deviations: 146622782187.0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,404 | INFO     | mean x: 1764174600.0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,404 | INFO     | mean y: 2247507.4789081886
[2025-11-26 12:56:07] 2025-11-26 19:55:21,404 | INFO     | intersect: -12743113250.217659
[2025-11-26 12:56:07] 2025-11-26 19:55:21,404 | INFO     | chi2: 2.7644664641645664
[2025-11-26 12:56:07] 2025-11-26 19:55:21,404 | INFO     | sum of square deviations: 19549015839.5
[2025-11-26 12:56:07] 2025-11-26 19:55:21,406 | INFO     | sum of deviations: 192568856012.0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,406 | INFO     | mean x: 1764174447.5
[2025-11-26 12:56:07] 2025-11-26 19:55:21,406 | INFO     | mean y: 2256840.9949748744
[2025-11-26 12:56:07] 2025-11-26 19:55:21,406 | INFO     | intersect: -17375858658.51992
[2025-11-26 12:56:07] 2025-11-26 19:55:21,406 | INFO     | chi2: 1.6453842004088368
[2025-11-26 12:56:07] 2025-11-26 19:55:21,406 | INFO     | current chi2=1.6453842004088368 (change=40.480949154647135 %)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,406 | INFO     | sum of square deviations: 18821458012.0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,408 | INFO     | sum of deviations: 188428495651.99997
[2025-11-26 12:56:07] 2025-11-26 19:55:21,408 | INFO     | mean x: 1764174295.0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,408 | INFO     | mean y: 2255973.1297709923
[2025-11-26 12:56:07] 2025-11-26 19:55:21,408 | INFO     | intersect: -17659537723.343483
[2025-11-26 12:56:07] 2025-11-26 19:55:21,408 | INFO     | chi2: 1.6444696538808294
[2025-11-26 12:56:07] 2025-11-26 19:55:21,408 | INFO     | current chi2=1.6444696538808294 (change=0.05558255195231206 %)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,408 | INFO     | right removable region: 392
[2025-11-26 12:56:07] 2025-11-26 19:55:21,409 | INFO     | sum of square deviations: 19549015839.5
[2025-11-26 12:56:07] 2025-11-26 19:55:21,410 | INFO     | sum of deviations: 83012132185.99998
[2025-11-26 12:56:07] 2025-11-26 19:55:21,410 | INFO     | mean x: 1764174752.5
[2025-11-26 12:56:07] 2025-11-26 19:55:21,410 | INFO     | mean y: 2260444.904522613
[2025-11-26 12:56:07] 2025-11-26 19:55:21,410 | INFO     | intersect: -7489058246.332441
[2025-11-26 12:56:07] 2025-11-26 19:55:21,411 | INFO     | chi2: 1.168354705967816
[2025-11-26 12:56:07] 2025-11-26 19:55:21,411 | INFO     | current chi2=1.168354705967816 (change=57.73670177905746 %)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,411 | INFO     | sum of square deviations: 18821458012.0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,413 | INFO     | sum of deviations: 74395273223.0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,413 | INFO     | mean x: 1764174905.0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,413 | INFO     | mean y: 2262249.493638677
[2025-11-26 12:56:07] 2025-11-26 19:55:21,413 | INFO     | intersect: -6970963415.965241
[2025-11-26 12:56:07] 2025-11-26 19:55:21,413 | INFO     | chi2: 1.1614872062676627
[2025-11-26 12:56:07] 2025-11-26 19:55:21,413 | INFO     | current chi2=1.1614872062676627 (change=0.5877923600662596 %)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,413 | INFO     | left removable region: 20
[2025-11-26 12:56:07] 2025-11-26 19:55:21,413 | INFO     | sum of square deviations: 15962617433.0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | sum of deviations: 100029319662.50002
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | mean x: 1764174874.5
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | mean y: 2274962.7123655914
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | intersect: -11052880196.058228
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | chi2: 0.022098034975164556
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | current memory leak: 6.27 B/s (using 372 data points, chi2=0.02)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | could have reported an average CPU frequency of 4963 MHz (17 samples)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | ..............................
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | . Timing measurements:
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | . get job = 0 s
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | . initial setup = 3 s
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | . payload setup = 2 s
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | . stage-in = 0 s
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | . payload execution = 24570 s
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | . stage-out = 2 s
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | . log creation = 0 s
[2025-11-26 12:56:07] 2025-11-26 19:55:21,415 | INFO     | ..............................
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | 
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | job summary report
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | --------------------------------------------------
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | PanDA job id: 6896420944
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | task id: 47556149
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | errors: (none)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | pilot state: finished 
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | transexitcode: 0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | exeerrorcode: 0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | exeerrordiag: 
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | exitcode: 0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | exitmsg: OK
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | cpuconsumptiontime: 97364 s
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | nevents: 1000
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | neventsw: 0
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | pid: 709647
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | pgrp: 709647
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | corecount: 4
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | event service: False
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | sizes: {0: 2284100, 1: 2284299, 3: 2284561, 11: 2284589, 24576: 2321432, 24577: 2321431, 24580: 2330623, 24584: 2330679, 24588: 2330989}
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | --------------------------------------------------
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | 
[2025-11-26 12:56:07] 2025-11-26 19:55:21,455 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,466 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 12:56:07] 2025-11-26 19:55:21,467 | INFO     | job 6896420944 has completed (purged errors)
[2025-11-26 12:56:07] 2025-11-26 19:55:21,467 | INFO     | overall cleanup function is called
[2025-11-26 12:56:07] 2025-11-26 19:55:22,476 | INFO     | --- collectZombieJob: --- 10, [709647]
[2025-11-26 12:56:07] 2025-11-26 19:55:22,476 | INFO     | zombie collector waiting for pid 709647
[2025-11-26 12:56:07] 2025-11-26 19:55:22,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 12:56:07] 2025-11-26 19:55:22,476 | INFO     | collected zombie processes
[2025-11-26 12:56:07] 2025-11-26 19:55:22,476 | INFO     | will attempt to kill all subprocesses of pid=709647
[2025-11-26 12:56:07] 2025-11-26 19:55:22,556 | INFO     | process IDs to be killed: [709647] (in reverse order)
[2025-11-26 12:56:07] 2025-11-26 19:55:22,595 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 12:56:07] 2025-11-26 19:55:22,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 12:56:07] 2025-11-26 19:55:22,598 | INFO     | did not find any defunct processes belonging to 709647
[2025-11-26 12:56:07] 2025-11-26 19:55:22,601 | INFO     | did not find any defunct processes belonging to 709647
[2025-11-26 12:56:07] 2025-11-26 19:55:22,601 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 12:56:07] 2025-11-26 19:55:22,602 | INFO     | ready for new job
[2025-11-26 12:56:07] 2025-11-26 19:55:22,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 12:56:07] 2025-11-26 19:55:22,603 | INFO     | ***************************************
[2025-11-26 12:56:07] 2025-11-26 19:55:22,603 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 12:56:07] 2025-11-26 19:55:22,603 | INFO     | ***************************************
[2025-11-26 12:56:07] 2025-11-26 19:55:22,603 | INFO     | 
[2025-11-26 12:56:07] 2025-11-26 19:55:22,604 | INFO     | architecture information:
[2025-11-26 12:56:07] 2025-11-26 19:55:22,604 | INFO     | executing command: cat /etc/os-release
[2025-11-26 12:56:07] 2025-11-26 19:55:22,613 | INFO     | cat /etc/os-release:
[2025-11-26 12:56:07] NAME="CentOS Linux"
[2025-11-26 12:56:07] VERSION="7 (Core)"
[2025-11-26 12:56:07] ID="centos"
[2025-11-26 12:56:07] ID_LIKE="rhel fedora"
[2025-11-26 12:56:07] VERSION_ID="7"
[2025-11-26 12:56:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 12:56:07] ANSI_COLOR="0;31"
[2025-11-26 12:56:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 12:56:07] HOME_URL="https://www.centos.org/"
[2025-11-26 12:56:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 12:56:07] 
[2025-11-26 12:56:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 12:56:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 12:56:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 12:56:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 12:56:07] 
[2025-11-26 12:56:07] 2025-11-26 19:55:22,613 | INFO     | ***************************************
[2025-11-26 12:56:07] 2025-11-26 19:55:23,116 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-11-26 12:56:07] 2025-11-26 19:55:23,124 | INFO     | sufficient remaining disk space (438998925312 B)
[2025-11-26 12:56:07] 2025-11-26 19:55:23,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 12:56:07] 2025-11-26 19:55:23,124 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 12:56:07] 2025-11-26 19:55:23,124 | INFO     | update_server=False
[2025-11-26 12:56:07] 2025-11-26 19:55:23,124 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 12:56:07] 2025-11-26 19:55:23,124 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 12:56:07] 2025-11-26 19:55:23,125 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 12:56:07] 2025-11-26 19:55:23,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 12:56:07] 2025-11-26 19:55:23,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 12:56:07] 2025-11-26 19:55:23,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:56:07] 2025-11-26 19:55:23,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 12:56:07] 2025-11-26 19:55:23,125 | INFO     | aborting loop
[2025-11-26 12:56:07] 2025-11-26 19:55:23,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 12:56:07] 2025-11-26 19:55:23,751 | INFO     | all job control threads have been joined
[2025-11-26 12:56:07] 2025-11-26 19:55:24,129 | INFO     | [job] retrieve thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:24,130 | INFO     | [job] queue monitor thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:24,130 | INFO     | [job] job monitor thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:24,160 | INFO     | all data control threads have been joined
[2025-11-26 12:56:07] 2025-11-26 19:55:24,179 | INFO     | [payload] validate_post thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:24,239 | INFO     | [data] copytool_in thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:24,258 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:24,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 12:56:07] 2025-11-26 19:55:24,490 | INFO     | all payload control threads have been joined
[2025-11-26 12:56:07] 2025-11-26 19:55:24,756 | INFO     | [job] control thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:25,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:25,165 | INFO     | [data] control thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:25,195 | INFO     | [job] validate thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:25,218 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:25,247 | INFO     | [payload] failed_post thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:25,408 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:25,495 | INFO     | [payload] control thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:26,405 | INFO     | [data] copytool_out thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:55:27,435 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 12:56:07] 2025-11-26 19:56:01,061 | INFO     | [monitor] cgroup control has ended
[2025-11-26 12:56:07] 2025-11-26 19:56:02,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128854513338176)>', '<ExcThread(monitor, started 128854010078976)>']
[2025-11-26 12:56:07] 2025-11-26 19:56:02,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 12:56:07] 2025-11-26 19:56:02,312 | INFO     | [monitor] control thread has ended
[2025-11-26 12:56:07] 2025-11-26 19:56:07,061 | INFO     | all workflow threads have been joined
[2025-11-26 12:56:07] 2025-11-26 19:56:07,061 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 12:56:07] 2025-11-26 19:56:07,061 | INFO     | traces error code: 0
[2025-11-26 12:56:07] 2025-11-26 19:56:07,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 12:56:07] 2025-11-26 19:56:07,115 [wrapper] ==== pilot stdout END ====
[2025-11-26 12:56:07] 2025-11-26 19:56:07,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 12:56:07] 2025-11-26 19:56:07,118 [wrapper] pilotpid: 702974
[2025-11-26 12:56:07] 2025-11-26 19:56:07,119 [wrapper] Pilot exit status: 0
[2025-11-26 12:56:07] 2025-11-26 19:56:07,123 [wrapper] pandaids: 6896420944
[2025-11-26 12:56:07] 2025-11-26 19:56:07,146 [wrapper] cleanup supervisor_pilot 1080555 702975
[2025-11-26 12:56:07] 2025-11-26 19:56:07,148 [wrapper] Test setup, not cleaning
[2025-11-26 12:56:07] 2025-11-26 19:56:07,149 [wrapper] apfmon messages muted
[2025-11-26 12:56:07] 2025-11-26 19:56:07,150 [wrapper] ==== wrapper stdout END ====
[2025-11-26 12:56:07] 2025-11-26 19:56:07,151 [wrapper] ==== wrapper stderr END ====
[2025-11-26 12:56:07]  *** Error codes and diagnostics ***
[2025-11-26 12:56:07]     "exeErrorCode": 0,
[2025-11-26 12:56:07]     "exeErrorDiag": "",
[2025-11-26 12:56:07]     "pilotErrorCode": 0,
[2025-11-26 12:56:07]     "pilotErrorDiag": "",
[2025-11-26 12:56:07]  *** Listing of results directory ***
[2025-11-26 12:56:07] total 1332840
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc    576529 Nov 24 20:04 pilot3.tar.gz
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc      5112 Nov 24 20:11 queuedata.json
[2025-11-26 12:56:07] -rwx------ 1 boinc boinc     36292 Nov 24 20:14 runpilot2-wrapper.sh
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc       100 Nov 26 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 12:56:07] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 06:05 run_atlas
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc       105 Nov 26 06:05 job.xml
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc      9948 Nov 26 06:05 init_data.xml
[2025-11-26 12:56:07] -rw-r--r-- 2 boinc boinc 412567362 Nov 26 06:05 EVNT.47483658._001484.pool.root.1
[2025-11-26 12:56:07] -rw-r--r-- 2 boinc boinc     15847 Nov 26 06:05 start_atlas.sh
[2025-11-26 12:56:07] drwxrwx--x 2 boinc boinc      4096 Nov 26 06:05 shared
[2025-11-26 12:56:07] -rw-r--r-- 2 boinc boinc    590104 Nov 26 06:05 input.tar.gz
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc         0 Nov 26 06:05 boinc_lockfile
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc      2785 Nov 26 06:05 pandaJob.out
[2025-11-26 12:56:07] -rw------- 1 boinc boinc    991830 Nov 26 06:05 agis_schedconf.cvmfs.json
[2025-11-26 12:56:07] drwx------ 5 boinc boinc      4096 Nov 26 06:05 pilot3
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc       531 Nov 26 12:51 boinc_task_state.xml
[2025-11-26 12:56:07] -rw------- 1 boinc boinc 938732893 Nov 26 12:54 HITS.47556149._004706.pool.root.1
[2025-11-26 12:56:07] -rw------- 1 boinc boinc      1031 Nov 26 12:55 memory_monitor_summary.json
[2025-11-26 12:56:07] -rw------- 1 boinc boinc   1516240 Nov 26 12:55 agis_ddmendpoints.agis.ALL.json
[2025-11-26 12:56:07] -rw------- 1 boinc boinc   1237425 Nov 26 12:55 log.47556149._004706.job.log.tgz.1
[2025-11-26 12:56:07] -rw------- 1 boinc boinc        95 Nov 26 12:55 pilot_heartbeat.json
[2025-11-26 12:56:07] -rw------- 1 boinc boinc      8542 Nov 26 12:55 heartbeat.json
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc      8192 Nov 26 12:56 boinc_mmap_file
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc        28 Nov 26 12:56 wrapper_checkpoint.txt
[2025-11-26 12:56:07] -rw------- 1 boinc boinc      4560 Nov 26 12:56 pilotlog.txt
[2025-11-26 12:56:07] -rw------- 1 boinc boinc   3561198 Nov 26 12:56 log.47556149._004706.job.log.1
[2025-11-26 12:56:07] -rw------- 1 boinc boinc       353 Nov 26 12:56 output.list
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc       620 Nov 26 12:56 runtime_log
[2025-11-26 12:56:07] -rw------- 1 boinc boinc   4823040 Nov 26 12:56 result.tar.gz
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc      8920 Nov 26 12:56 runtime_log.err
[2025-11-26 12:56:07] -rw------- 1 boinc boinc       660 Nov 26 12:56 n1UKDm9gyh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb4LKDm1zhpvn.diag
[2025-11-26 12:56:07] -rw-r--r-- 1 boinc boinc     21402 Nov 26 12:56 stderr.txt
[2025-11-26 12:56:07] HITS file was successfully produced:
[2025-11-26 12:56:07] -rw------- 1 boinc boinc 938732893 Nov 26 12:54 shared/HITS.pool.root.1
[2025-11-26 12:56:07]  *** Contents of shared directory: ***
[2025-11-26 12:56:07] total 1324948
[2025-11-26 12:56:07] -rw-r--r-- 2 boinc boinc 412567362 Nov 26 06:05 ATLAS.root_0
[2025-11-26 12:56:07] -rw-r--r-- 2 boinc boinc     15847 Nov 26 06:05 start_atlas.sh
[2025-11-26 12:56:07] -rw-r--r-- 2 boinc boinc    590104 Nov 26 06:05 input.tar.gz
[2025-11-26 12:56:07] -rw------- 1 boinc boinc 938732893 Nov 26 12:54 HITS.pool.root.1
[2025-11-26 12:56:07] -rw------- 1 boinc boinc   4823040 Nov 26 12:56 result.tar.gz
12:56:08 (699120): run_atlas exited; CPU time 97327.272314
12:56:08 (699120): called boinc_finish(0)

</stderr_txt>
]]>

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