Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:45:44 (1489555): wrapper (7.7.26015): starting
21:45:44 (1489555): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 21:45:44] Arguments: --nthreads 8
[2025-11-26 21:45:44] Threads: 8
[2025-11-26 21:45:44] Checking for CVMFS
[2025-11-26 21:45:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:45:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:45:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:45:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:45:47] 2.13.2.0 5795 33768 187020 153343 3 361 25191526 39288833 9477 16776704 0 25345800 99.601 22757511 36305 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 21:45:47] CVMFS is ok
[2025-11-26 21:45:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:45:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:45:47] Further information can be found at the LHC@home message board.
[2025-11-26 21:45:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:45:47] Checking for apptainer binary...
[2025-11-26 21:45:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:45:47] Running /usr/bin/apptainer --version
[2025-11-26 21:45:47] apptainer version 1.4.4-1.el9
[2025-11-26 21:45:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:45:48] c-210-14.aglt2.org
[2025-11-26 21:45:48] apptainer works
[2025-11-26 21:45:48] Set ATHENA_PROC_NUMBER=8
[2025-11-26 21:45:48] Set ATHENA_CORE_NUMBER=8
[2025-11-26 21:45:48] Starting ATLAS job with PandaID=6895674852
[2025-11-26 21:45:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:43:43]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:43:43] 2025-11-28 02:42:35,945 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:43:43] 2025-11-28 02:42:35,954 | INFO     | sum of square deviations: 867388137908.7662
[2025-11-27 21:43:43] 2025-11-28 02:42:36,036 | INFO     | sum of deviations: 5920997986559.18
[2025-11-27 21:43:43] 2025-11-28 02:42:36,037 | INFO     | mean x: 1764254747.874379
[2025-11-27 21:43:43] 2025-11-28 02:42:36,037 | INFO     | mean y: 2934631.351312988
[2025-11-27 21:43:43] 2025-11-28 02:42:36,037 | INFO     | intersect: -12040288411.94147
[2025-11-27 21:43:43] 2025-11-28 02:42:36,039 | INFO     | chi2: 12.355885781373
[2025-11-27 21:43:43] 2025-11-28 02:42:36,041 | INFO     | sum of square deviations: 858187635991.1361
[2025-11-27 21:43:43] 2025-11-28 02:42:36,090 | INFO     | sum of deviations: 6409471933493.639
[2025-11-27 21:43:43] 2025-11-28 02:42:36,090 | INFO     | mean x: 1764254595.3810542
[2025-11-27 21:43:43] 2025-11-28 02:42:36,090 | INFO     | mean y: 2942728.8212250713
[2025-11-27 21:43:43] 2025-11-28 02:42:36,090 | INFO     | intersect: -13173593308.74625
[2025-11-27 21:43:43] 2025-11-28 02:42:36,092 | INFO     | chi2: 9.154690626468112
[2025-11-27 21:43:43] 2025-11-28 02:42:36,093 | INFO     | current chi2=9.154690626468112 (change=25.908261144100415 %)
[2025-11-27 21:43:43] 2025-11-28 02:42:36,095 | INFO     | sum of square deviations: 849052266826.9286
[2025-11-27 21:43:43] 2025-11-28 02:42:36,196 | INFO     | sum of deviations: 6513368824039.74
[2025-11-27 21:43:43] 2025-11-28 02:42:36,197 | INFO     | mean x: 1764254442.8863473
[2025-11-27 21:43:43] 2025-11-28 02:42:36,197 | INFO     | mean y: 2944460.5518227303
[2025-11-27 21:43:43] 2025-11-28 02:42:36,197 | INFO     | intersect: -13531251648.380913
[2025-11-27 21:43:43] 2025-11-28 02:42:36,199 | INFO     | chi2: 8.79685512566148
[2025-11-27 21:43:43] 2025-11-28 02:42:36,199 | INFO     | current chi2=8.79685512566148 (change=3.908766723061669 %)
[2025-11-27 21:43:43] 2025-11-28 02:42:36,199 | INFO     | right removable region: 1398
[2025-11-27 21:43:43] 2025-11-28 02:42:36,201 | INFO     | sum of square deviations: 858186024981.1362
[2025-11-27 21:43:43] 2025-11-28 02:42:36,246 | INFO     | sum of deviations: 5339530170385.574
[2025-11-27 21:43:43] 2025-11-28 02:42:36,246 | INFO     | mean x: 1764254900.3810542
[2025-11-27 21:43:43] 2025-11-28 02:42:36,246 | INFO     | mean y: 2944266.638176638
[2025-11-27 21:43:43] 2025-11-28 02:42:36,246 | INFO     | intersect: -10974037407.052328
[2025-11-27 21:43:43] 2025-11-28 02:42:36,248 | INFO     | chi2: 8.089258261606105
[2025-11-27 21:43:43] 2025-11-28 02:42:36,248 | INFO     | current chi2=8.089258261606105 (change=34.53113435379121 %)
[2025-11-27 21:43:43] 2025-11-28 02:42:36,250 | INFO     | sum of square deviations: 849049215603.3812
[2025-11-27 21:43:43] 2025-11-28 02:42:36,297 | INFO     | sum of deviations: 4854243177022.009
[2025-11-27 21:43:43] 2025-11-28 02:42:36,298 | INFO     | mean x: 1764255052.887777
[2025-11-27 21:43:43] 2025-11-28 02:42:36,298 | INFO     | mean y: 2952365.6497498215
[2025-11-27 21:43:43] 2025-11-28 02:42:36,298 | INFO     | intersect: -10083769223.181772
[2025-11-27 21:43:43] 2025-11-28 02:42:36,300 | INFO     | chi2: 5.25946776785879
[2025-11-27 21:43:43] 2025-11-28 02:42:36,300 | INFO     | current chi2=5.25946776785879 (change=34.98207625757601 %)
[2025-11-27 21:43:43] 2025-11-28 02:42:36,302 | INFO     | sum of square deviations: 839977988153.7076
[2025-11-27 21:43:43] 2025-11-28 02:42:36,351 | INFO     | sum of deviations: 4610932435781.836
[2025-11-27 21:43:43] 2025-11-28 02:42:36,351 | INFO     | mean x: 1764255205.390244
[2025-11-27 21:43:43] 2025-11-28 02:42:36,352 | INFO     | mean y: 2956452.855093257
[2025-11-27 21:43:43] 2025-11-28 02:42:36,352 | INFO     | intersect: -9681656318.262217
[2025-11-27 21:43:43] 2025-11-28 02:42:36,354 | INFO     | chi2: 4.566963831234933
[2025-11-27 21:43:43] 2025-11-28 02:42:36,354 | INFO     | current chi2=4.566963831234933 (change=13.166806361203085 %)
[2025-11-27 21:43:43] 2025-11-28 02:42:36,354 | INFO     | left removable region: 30
[2025-11-27 21:43:43] 2025-11-28 02:42:36,356 | INFO     | sum of square deviations: 793850808454.678
[2025-11-27 21:43:43] 2025-11-28 02:42:36,422 | INFO     | sum of deviations: 4846568600274.8545
[2025-11-27 21:43:43] 2025-11-28 02:42:36,423 | INFO     | mean x: 1764255327.4013157
[2025-11-27 21:43:43] 2025-11-28 02:42:36,423 | INFO     | mean y: 2972525.8545321636
[2025-11-27 21:43:43] 2025-11-28 02:42:36,423 | INFO     | intersect: -10768049411.246655
[2025-11-27 21:43:43] 2025-11-28 02:42:36,429 | INFO     | chi2: 0.7760241054506454
[2025-11-27 21:43:43] 2025-11-28 02:42:36,429 | INFO     | current memory leak: 6.11 B/s (using 1368 data points, chi2=0.78)
[2025-11-27 21:43:43] 2025-11-28 02:42:36,435 | INFO     | could have reported an average CPU frequency of 2597 MHz (50 samples)
[2025-11-27 21:43:43] 2025-11-28 02:42:36,435 | INFO     | ..............................
[2025-11-27 21:43:43] 2025-11-28 02:42:36,435 | INFO     | . Timing measurements:
[2025-11-27 21:43:43] 2025-11-28 02:42:36,436 | INFO     | . get job = 0 s
[2025-11-27 21:43:43] 2025-11-28 02:42:36,436 | INFO     | . initial setup = 7 s
[2025-11-27 21:43:43] 2025-11-28 02:42:36,436 | INFO     | . payload setup = 57 s
[2025-11-27 21:43:43] 2025-11-28 02:42:36,436 | INFO     | . stage-in = 0 s
[2025-11-27 21:43:43] 2025-11-28 02:42:36,436 | INFO     | . payload execution = 85969 s
[2025-11-27 21:43:43] 2025-11-28 02:42:36,436 | INFO     | . stage-out = 4 s
[2025-11-27 21:43:43] 2025-11-28 02:42:36,436 | INFO     | . log creation = 1 s
[2025-11-27 21:43:43] 2025-11-28 02:42:36,436 | INFO     | ..............................
[2025-11-27 21:43:43] 2025-11-28 02:42:36,592 | INFO     | 
[2025-11-27 21:43:43] 2025-11-28 02:42:36,592 | INFO     | job summary report
[2025-11-27 21:43:43] 2025-11-28 02:42:36,592 | INFO     | --------------------------------------------------
[2025-11-27 21:43:43] 2025-11-28 02:42:36,592 | INFO     | PanDA job id: 6895674852
[2025-11-27 21:43:43] 2025-11-28 02:42:36,592 | INFO     | task id: 47556149
[2025-11-27 21:43:43] 2025-11-28 02:42:36,592 | INFO     | errors: (none)
[2025-11-27 21:43:43] 2025-11-28 02:42:36,592 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:43:43] 2025-11-28 02:42:36,593 | INFO     | pilot state: finished 
[2025-11-27 21:43:43] 2025-11-28 02:42:36,593 | INFO     | transexitcode: 0
[2025-11-27 21:43:43] 2025-11-28 02:42:36,593 | INFO     | exeerrorcode: 0
[2025-11-27 21:43:43] 2025-11-28 02:42:36,593 | INFO     | exeerrordiag: 
[2025-11-27 21:43:43] 2025-11-28 02:42:36,593 | INFO     | exitcode: 0
[2025-11-27 21:43:43] 2025-11-28 02:42:36,593 | INFO     | exitmsg: OK
[2025-11-27 21:43:43] 2025-11-28 02:42:36,593 | INFO     | cpuconsumptiontime: 306361 s
[2025-11-27 21:43:43] 2025-11-28 02:42:36,593 | INFO     | nevents: 1000
[2025-11-27 21:43:43] 2025-11-28 02:42:36,593 | INFO     | neventsw: 0
[2025-11-27 21:43:43] 2025-11-28 02:42:36,593 | INFO     | pid: 1502744
[2025-11-27 21:43:43] 2025-11-28 02:42:36,593 | INFO     | pgrp: 1502744
[2025-11-27 21:43:43] 2025-11-28 02:42:36,594 | INFO     | corecount: 8
[2025-11-27 21:43:43] 2025-11-28 02:42:36,594 | INFO     | event service: False
[2025-11-27 21:43:43] 2025-11-28 02:42:36,594 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 23: 2284371, 34: 2284399, 42: 2284689, 45: 2284873, 86029: 2350020, 86030: 2350019, 86034: 2359069, 86036: 2359125, 86
[2025-11-27 21:43:43] 2025-11-28 02:42:36,594 | INFO     | --------------------------------------------------
[2025-11-27 21:43:43] 2025-11-28 02:42:36,594 | INFO     | 
[2025-11-27 21:43:43] 2025-11-28 02:42:36,594 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 21:43:43] 2025-11-28 02:42:36,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,629 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,631 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:43:43] 2025-11-28 02:42:36,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,631 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:43:43] 2025-11-28 02:42:36,631 | INFO     | job 6895674852 has completed (purged errors)
[2025-11-27 21:43:43] 2025-11-28 02:42:36,631 | INFO     | overall cleanup function is called
[2025-11-27 21:43:43] 2025-11-28 02:42:37,665 | INFO     | --- collectZombieJob: --- 10, [1502744]
[2025-11-27 21:43:43] 2025-11-28 02:42:37,666 | INFO     | zombie collector waiting for pid 1502744
[2025-11-27 21:43:43] 2025-11-28 02:42:37,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:43:43] 2025-11-28 02:42:37,666 | INFO     | collected zombie processes
[2025-11-27 21:43:43] 2025-11-28 02:42:37,666 | INFO     | will attempt to kill all subprocesses of pid=1502744
[2025-11-27 21:43:43] 2025-11-28 02:42:38,047 | INFO     | process IDs to be killed: [1502744] (in reverse order)
[2025-11-27 21:43:43] 2025-11-28 02:42:38,186 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:43:43] 2025-11-28 02:42:38,187 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:43:43] 2025-11-28 02:42:38,209 | INFO     | did not find any defunct processes belonging to 1502744
[2025-11-27 21:43:43] 2025-11-28 02:42:38,220 | INFO     | did not find any defunct processes belonging to 1502744
[2025-11-27 21:43:43] 2025-11-28 02:42:38,229 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:43:43] 2025-11-28 02:42:38,229 | INFO     | ready for new job
[2025-11-27 21:43:43] 2025-11-28 02:42:38,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:43:43] 2025-11-28 02:42:38,238 | INFO     | ***************************************
[2025-11-27 21:43:43] 2025-11-28 02:42:38,239 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:43:43] 2025-11-28 02:42:38,239 | INFO     | ***************************************
[2025-11-27 21:43:43] 2025-11-28 02:42:38,239 | INFO     | 
[2025-11-27 21:43:43] 2025-11-28 02:42:38,241 | INFO     | architecture information:
[2025-11-27 21:43:43] 2025-11-28 02:42:38,241 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:43:43] 2025-11-28 02:42:38,284 | INFO     | cat /etc/os-release:
[2025-11-27 21:43:43] NAME="CentOS Linux"
[2025-11-27 21:43:43] VERSION="7 (Core)"
[2025-11-27 21:43:43] ID="centos"
[2025-11-27 21:43:43] ID_LIKE="rhel fedora"
[2025-11-27 21:43:43] VERSION_ID="7"
[2025-11-27 21:43:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:43:43] ANSI_COLOR="0;31"
[2025-11-27 21:43:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:43:43] HOME_URL="https://www.centos.org/"
[2025-11-27 21:43:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:43:43] 
[2025-11-27 21:43:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:43:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:43:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:43:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:43:43] 
[2025-11-27 21:43:43] 2025-11-28 02:42:38,284 | INFO     | ***************************************
[2025-11-27 21:43:43] 2025-11-28 02:42:38,787 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 21:43:43] 2025-11-28 02:42:38,816 | INFO     | sufficient remaining disk space (50417631232 B)
[2025-11-27 21:43:43] 2025-11-28 02:42:38,817 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:43:43] 2025-11-28 02:42:38,817 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:43:43] 2025-11-28 02:42:38,817 | INFO     | update_server=False
[2025-11-27 21:43:43] 2025-11-28 02:42:38,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:43:43] 2025-11-28 02:42:38,929 | INFO     | all data control threads have been joined
[2025-11-27 21:43:43] 2025-11-28 02:42:39,121 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 21:43:43] 2025-11-28 02:42:39,121 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 21:43:43] 2025-11-28 02:42:39,121 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:43:43] 2025-11-28 02:42:39,122 | INFO     | will abort loop
[2025-11-27 21:43:43] 2025-11-28 02:42:39,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:43:43] 2025-11-28 02:42:39,222 | INFO     | all job control threads have been joined
[2025-11-27 21:43:43] 2025-11-28 02:42:39,386 | INFO     | all payload control threads have been joined
[2025-11-27 21:43:43] 2025-11-28 02:42:39,826 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:39,935 | INFO     | [data] control thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:40,112 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:43:43] 2025-11-28 02:42:40,129 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:40,227 | INFO     | [job] control thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:40,392 | INFO     | [payload] control thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:40,399 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:40,421 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:40,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:40,600 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:40,657 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:40,692 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:40,824 | INFO     | [job] validate thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:41,011 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:41,138 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:41,606 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:43:43] 2025-11-28 02:42:42,612 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:42:44,121 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:43:43] 2025-11-28 02:43:08,435 | INFO     | PID=1494788 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:43:43] 2025-11-28 02:43:08,436 | INFO     | .. there are 8 such processes running
[2025-11-27 21:43:43] 2025-11-28 02:43:08,437 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:43:43] 2025-11-28 02:43:08,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:43:43] 2025-11-28 02:43:08,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:43:43] 2025-11-28 02:43:35,822 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:43:43] 2025-11-28 02:43:37,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082695817024)>', '<ExcThread(monitor, started 140082212226816)>']
[2025-11-27 21:43:43] 2025-11-28 02:43:38,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:43:43] 2025-11-28 02:43:38,662 | INFO     | [monitor] control thread has ended
[2025-11-27 21:43:43] 2025-11-28 02:43:42,913 | INFO     | all workflow threads have been joined
[2025-11-27 21:43:43] 2025-11-28 02:43:42,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:43:43] 2025-11-28 02:43:42,913 | INFO     | traces error code: 0
[2025-11-27 21:43:43] 2025-11-28 02:43:42,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:43:43] 2025-11-28 02:43:43,123 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:43:43] 2025-11-28 02:43:43,126 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:43:43] 2025-11-28 02:43:43,149 [wrapper] pilotpid: 1494788
[2025-11-27 21:43:43] 2025-11-28 02:43:43,154 [wrapper] Pilot exit status: 0
[2025-11-27 21:43:43] 2025-11-28 02:43:43,331 [wrapper] pandaids: 6895674852
[2025-11-27 21:43:43] 2025-11-28 02:43:43,407 [wrapper] cleanup supervisor_pilot 3597372 1494789
[2025-11-27 21:43:43] 2025-11-28 02:43:43,424 [wrapper] Test setup, not cleaning
[2025-11-27 21:43:43] 2025-11-28 02:43:43,445 [wrapper] apfmon messages muted
[2025-11-27 21:43:43] 2025-11-28 02:43:43,454 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:43:43] 2025-11-28 02:43:43,481 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:43:43]  *** Error codes and diagnostics ***
[2025-11-27 21:43:43]     "exeErrorCode": 0,
[2025-11-27 21:43:43]     "exeErrorDiag": "",
[2025-11-27 21:43:43]     "pilotErrorCode": 0,
[2025-11-27 21:43:43]     "pilotErrorDiag": "",
[2025-11-27 21:43:43]  *** Listing of results directory ***
[2025-11-27 21:43:43] total 1332704
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 10:13 pilot3.tar.gz
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 10:25 queuedata.json
[2025-11-27 21:43:43] -rwx------. 1 boincer umatlas     36292 Nov 24 10:26 runpilot2-wrapper.sh
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas       100 Nov 26 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:43:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 21:45 run_atlas
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas       105 Nov 26 21:45 job.xml
[2025-11-27 21:43:43] -rw-r--r--. 2 boincer umatlas 408116843 Nov 26 21:45 EVNT.47483658._001366.pool.root.1
[2025-11-27 21:43:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 21:45 start_atlas.sh
[2025-11-27 21:43:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 21:45 shared
[2025-11-27 21:43:43] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 21:45 input.tar.gz
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas         0 Nov 26 21:45 boinc_lockfile
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 21:45 pandaJob.out
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas        57 Nov 26 21:45 setup.sh.local
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas    991554 Nov 26 21:46 agis_schedconf.cvmfs.json
[2025-11-27 21:43:43] drwx------. 5 boincer umatlas      4096 Nov 26 21:47 pilot3
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas       533 Nov 27 21:31 boinc_task_state.xml
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas      6662 Nov 27 21:36 init_data.xml
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas 925081803 Nov 27 21:41 HITS.47556149._003527.pool.root.1
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas      1057 Nov 27 21:42 memory_monitor_summary.json
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas   1516240 Nov 27 21:42 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas   2479615 Nov 27 21:42 log.47556149._003527.job.log.tgz.1
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas      8618 Nov 27 21:42 heartbeat.json
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas        95 Nov 27 21:43 pilot_heartbeat.json
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas        29 Nov 27 21:43 wrapper_checkpoint.txt
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 21:43 boinc_mmap_file
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas      5009 Nov 27 21:43 pilotlog.txt
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas  11307949 Nov 27 21:43 log.47556149._003527.job.log.1
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas       353 Nov 27 21:43 output.list
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas       620 Nov 27 21:43 runtime_log
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas  13803520 Nov 27 21:43 result.tar.gz
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 21:43 runtime_log.err
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas       660 Nov 27 21:43 02qKDmwdnh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWjLKDmL1Nwin.diag
[2025-11-27 21:43:43] -rw-r--r--. 1 boincer umatlas     21178 Nov 27 21:43 stderr.txt
[2025-11-27 21:43:43] HITS file was successfully produced:
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas 925081803 Nov 27 21:41 shared/HITS.pool.root.1
[2025-11-27 21:43:43]  *** Contents of shared directory: ***
[2025-11-27 21:43:43] total 1316036
[2025-11-27 21:43:43] -rw-r--r--. 2 boincer umatlas 408116843 Nov 26 21:45 ATLAS.root_0
[2025-11-27 21:43:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 21:45 start_atlas.sh
[2025-11-27 21:43:43] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 21:45 input.tar.gz
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas 925081803 Nov 27 21:41 HITS.pool.root.1
[2025-11-27 21:43:43] -rw-------. 1 boincer umatlas  13803520 Nov 27 21:43 result.tar.gz
21:43:45 (1489555): run_atlas exited; CPU time 307998.889801
21:43:45 (1489555): called boinc_finish(0)

</stderr_txt>
]]>

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