Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:41:08 (2122859): wrapper (7.7.26015): starting
08:41:08 (2122859): wrapper: running run_atlas (--nthreads 11)
[2025-11-26 08:41:08] Arguments: --nthreads 11
[2025-11-26 08:41:08] Threads: 11
[2025-11-26 08:41:08] Checking for CVMFS
[2025-11-26 08:41:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:41:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:41:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:41:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:41:08] 2.13.3.0 1933508 27325 335244 153323 3 600 24158959 32503808 47178 16776704 0 163185465 99.530 191397278 38033 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 08:41:08] CVMFS is ok
[2025-11-26 08:41:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:41:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 08:41:08] Further information can be found at the LHC@home message board.
[2025-11-26 08:41:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:41:08] Checking for apptainer binary...
[2025-11-26 08:41:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:41:08] Running /usr/bin/apptainer --version
[2025-11-26 08:41:08] apptainer version 1.4.4-1.el9
[2025-11-26 08:41:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:41:09] c7-3-16.aglt2.org
[2025-11-26 08:41:09] apptainer works
[2025-11-26 08:41:09] Set ATHENA_PROC_NUMBER=11
[2025-11-26 08:41:09] Set ATHENA_CORE_NUMBER=11
[2025-11-26 08:41:09] Starting ATLAS job with PandaID=6895651779
[2025-11-26 08:41:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:40:12 (2122859): BOINC client no longer exists - exiting
16:40:12 (2122859): timer handler: client dead, exiting
16:49:06 (3068077): wrapper (7.7.26015): starting
16:49:06 (3068077): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 16:49:06] Arguments: --nthreads 10
[2025-11-26 16:49:06] Threads: 10
[2025-11-26 16:49:06] This job has been restarted, cleaning up previous attempt
[2025-11-26 16:49:06] Checking for CVMFS
[2025-11-26 16:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:49:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:49:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:49:07] 2.13.3.0 1933508 27813 341072 153335 0 686 31997761 32503808 53696 16776704 0 172343988 99.540 197399577 37666 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:49:07] CVMFS is ok
[2025-11-26 16:49:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:49:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:49:07] Further information can be found at the LHC@home message board.
[2025-11-26 16:49:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:49:07] Checking for apptainer binary...
[2025-11-26 16:49:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:49:07] Running /usr/bin/apptainer --version
[2025-11-26 16:49:07] apptainer version 1.4.4-1.el9
[2025-11-26 16:49:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:49:07] c7-3-16.aglt2.org
[2025-11-26 16:49:07] apptainer works
[2025-11-26 16:49:07] Set ATHENA_PROC_NUMBER=10
[2025-11-26 16:49:07] Set ATHENA_CORE_NUMBER=10
[2025-11-26 16:49:07] Starting ATLAS job with PandaID=6895651779
[2025-11-26 16:49:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:20:20 (3068077): BOINC client no longer exists - exiting
18:20:20 (3068077): timer handler: client dead, exiting
18:29:53 (66949): wrapper (7.7.26015): starting
18:29:53 (66949): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 18:29:53] Arguments: --nthreads 10
[2025-11-26 18:29:53] Threads: 10
[2025-11-26 18:29:53] This job has been restarted, cleaning up previous attempt
[2025-11-26 18:29:53] Checking for CVMFS
[2025-11-26 18:29:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:29:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:29:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:29:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:29:53] 2.13.3.0 1933508 27913 319320 153340 0 165 31198774 32503808 54069 16776704 0 175435890 99.537 202278147 37380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:29:53] CVMFS is ok
[2025-11-26 18:29:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:29:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:29:53] Further information can be found at the LHC@home message board.
[2025-11-26 18:29:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:29:53] Checking for apptainer binary...
[2025-11-26 18:29:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:29:53] Running /usr/bin/apptainer --version
[2025-11-26 18:29:53] apptainer version 1.4.4-1.el9
[2025-11-26 18:29:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:29:53] c7-3-16.aglt2.org
[2025-11-26 18:29:53] apptainer works
[2025-11-26 18:29:53] Set ATHENA_PROC_NUMBER=10
[2025-11-26 18:29:53] Set ATHENA_CORE_NUMBER=10
[2025-11-26 18:29:53] Starting ATLAS job with PandaID=6895651779
[2025-11-26 18:29:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:18:05]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:18:05] 2025-11-27 17:17:01,028 | INFO     | job 6895651779 has state=finished
[2025-11-27 12:18:05] 2025-11-27 17:17:01,029 | INFO     | preparing for final server update for job 6895651779 in state='finished'
[2025-11-27 12:18:05] 2025-11-27 17:17:01,029 | INFO     | this job has now completed (state=finished)
[2025-11-27 12:18:05] 2025-11-27 17:17:01,029 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-27 12:18:05] 2025-11-27 17:17:01,029 | INFO     | log transfer has been attempted: DONE
[2025-11-27 12:18:05] 2025-11-27 17:17:01,029 | INFO     | job 6895651779 has finished - writing final server update
[2025-11-27 12:18:05] 2025-11-27 17:17:01,029 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 12:18:05] 2025-11-27 17:17:01,041 | INFO     | executing command: lscpu
[2025-11-27 12:18:05] 2025-11-27 17:17:01,152 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 12:18:05] 2025-11-27 17:17:01,239 | INFO     | time since job start (64018s) is within the limit (172800.0s)
[2025-11-27 12:18:05] 2025-11-27 17:17:03,246 | INFO     | time since job start (64020s) is within the limit (172800.0s)
[2025-11-27 12:18:05] 2025-11-27 17:17:03,543 | INFO     | monitor loop #3853: job 0:6895651779 is in state 'finished'
[2025-11-27 12:18:05] 2025-11-27 17:17:03,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:18:05] 2025-11-27 17:17:05,254 | INFO     | time since job start (64022s) is within the limit (172800.0s)
[2025-11-27 12:18:05] 2025-11-27 17:17:06,060 | INFO     | monitor loop #3854: job 0:6895651779 is in state 'finished'
[2025-11-27 12:18:05] 2025-11-27 17:17:06,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:18:05] 2025-11-27 17:17:06,950 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 12:18:05] 2025-11-27 17:17:06,959 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3297.7212187500004
[2025-11-27 12:18:05] 2025-11-27 17:17:06,972 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895651779/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 12:18:05] 2025-11-27 17:17:06,973 | INFO     | extracted standard info from prmon json
[2025-11-27 12:18:05] 2025-11-27 17:17:06,973 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:18:05] 2025-11-27 17:17:06,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:18:05] 2025-11-27 17:17:06,986 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:18:05] 2025-11-27 17:17:06,987 | INFO     | sum of square deviations: 357930147760.6177
[2025-11-27 12:18:05] 2025-11-27 17:17:07,005 | INFO     | sum of deviations: 4106052690882.076
[2025-11-27 12:18:05] 2025-11-27 17:17:07,006 | INFO     | mean x: 1764231794.9161105
[2025-11-27 12:18:05] 2025-11-27 17:17:07,006 | INFO     | mean y: 5124275.000953289
[2025-11-27 12:18:05] 2025-11-27 17:17:07,006 | INFO     | intersect: -20233541716.60976
[2025-11-27 12:18:05] 2025-11-27 17:17:07,007 | INFO     | chi2: 12.066191383716912
[2025-11-27 12:18:05] 2025-11-27 17:17:07,008 | INFO     | sum of square deviations: 352836559306.4012
[2025-11-27 12:18:05] 2025-11-27 17:17:07,031 | INFO     | sum of deviations: 4702957337731.16
[2025-11-27 12:18:05] 2025-11-27 17:17:07,031 | INFO     | mean x: 1764231642.4204981
[2025-11-27 12:18:05] 2025-11-27 17:17:07,031 | INFO     | mean y: 5142136.544061303
[2025-11-27 12:18:05] 2025-11-27 17:17:07,032 | INFO     | intersect: -23510295618.79869
[2025-11-27 12:18:05] 2025-11-27 17:17:07,032 | INFO     | chi2: 9.126249092784942
[2025-11-27 12:18:05] 2025-11-27 17:17:07,032 | INFO     | current chi2=9.126249092784942 (change=24.365122327658124 %)
[2025-11-27 12:18:05] 2025-11-27 17:17:07,033 | INFO     | right removable region: 1043
[2025-11-27 12:18:05] 2025-11-27 17:17:07,033 | INFO     | sum of square deviations: 352836228565.75037
[2025-11-27 12:18:05] 2025-11-27 17:17:07,052 | INFO     | sum of deviations: 3546261426760.5054
[2025-11-27 12:18:05] 2025-11-27 17:17:07,052 | INFO     | mean x: 1764231947.4166667
[2025-11-27 12:18:05] 2025-11-27 17:17:07,053 | INFO     | mean y: 5141022.086206896
[2025-11-27 12:18:05] 2025-11-27 17:17:07,053 | INFO     | intersect: -17726676734.877544
[2025-11-27 12:18:05] 2025-11-27 17:17:07,053 | INFO     | chi2: 9.581613202475003
[2025-11-27 12:18:05] 2025-11-27 17:17:07,054 | INFO     | current chi2=9.581613202475003 (change=20.591237965898657 %)
[2025-11-27 12:18:05] 2025-11-27 17:17:07,054 | INFO     | left removable region: 10
[2025-11-27 12:18:05] 2025-11-27 17:17:07,054 | INFO     | sum of square deviations: 341800664514.64886
[2025-11-27 12:18:05] 2025-11-27 17:17:07,073 | INFO     | sum of deviations: 3802208579555.765
[2025-11-27 12:18:05] 2025-11-27 17:17:07,074 | INFO     | mean x: 1764231916.9215877
[2025-11-27 12:18:05] 2025-11-27 17:17:07,074 | INFO     | mean y: 5173304.44143272
[2025-11-27 12:18:05] 2025-11-27 17:17:07,074 | INFO     | intersect: -19620235383.31109
[2025-11-27 12:18:05] 2025-11-27 17:17:07,075 | INFO     | chi2: 5.349734582921625
[2025-11-27 12:18:05] 2025-11-27 17:17:07,075 | INFO     | current memory leak: 11.12 B/s (using 1033 data points, chi2=5.35)
[2025-11-27 12:18:05] 2025-11-27 17:17:07,076 | INFO     | could have reported an average CPU frequency of 3307 MHz (39 samples)
[2025-11-27 12:18:05] 2025-11-27 17:17:07,077 | INFO     | ..............................
[2025-11-27 12:18:05] 2025-11-27 17:17:07,077 | INFO     | . Timing measurements:
[2025-11-27 12:18:05] 2025-11-27 17:17:07,077 | INFO     | . get job = 0 s
[2025-11-27 12:18:05] 2025-11-27 17:17:07,077 | INFO     | . initial setup = 0 s
[2025-11-27 12:18:05] 2025-11-27 17:17:07,077 | INFO     | . payload setup = 6 s
[2025-11-27 12:18:05] 2025-11-27 17:17:07,077 | INFO     | . stage-in = 0 s
[2025-11-27 12:18:05] 2025-11-27 17:17:07,077 | INFO     | . payload execution = 63985 s
[2025-11-27 12:18:05] 2025-11-27 17:17:07,077 | INFO     | . stage-out = 5 s
[2025-11-27 12:18:05] 2025-11-27 17:17:07,077 | INFO     | . log creation = 1 s
[2025-11-27 12:18:05] 2025-11-27 17:17:07,077 | INFO     | ..............................
[2025-11-27 12:18:05] 2025-11-27 17:17:07,147 | INFO     | 
[2025-11-27 12:18:05] 2025-11-27 17:17:07,148 | INFO     | job summary report
[2025-11-27 12:18:05] 2025-11-27 17:17:07,152 | INFO     | --------------------------------------------------
[2025-11-27 12:18:05] 2025-11-27 17:17:07,152 | INFO     | PanDA job id: 6895651779
[2025-11-27 12:18:05] 2025-11-27 17:17:07,152 | INFO     | task id: 47556149
[2025-11-27 12:18:05] 2025-11-27 17:17:07,152 | INFO     | errors: (none)
[2025-11-27 12:18:05] 2025-11-27 17:17:07,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | pilot state: finished 
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | transexitcode: 0
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | exeerrorcode: 0
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | exeerrordiag: 
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | exitcode: 0
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | exitmsg: OK
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | cpuconsumptiontime: 193814 s
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | nevents: 1000
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | neventsw: 0
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | pid: 141675
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | pgrp: 141675
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | corecount: 10
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | event service: False
[2025-11-27 12:18:05] 2025-11-27 17:17:07,153 | INFO     | sizes: {0: 2284314, 5: 2284576, 11: 2284632, 63996: 2339620, 64002: 2348614, 64003: 2348670, 64009: 2349044}
[2025-11-27 12:18:05] 2025-11-27 17:17:07,154 | INFO     | --------------------------------------------------
[2025-11-27 12:18:05] 2025-11-27 17:17:07,154 | INFO     | 
[2025-11-27 12:18:05] 2025-11-27 17:17:07,154 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 12:18:05] 2025-11-27 17:17:07,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,179 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,179 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,179 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,179 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,180 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,180 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,180 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,180 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,180 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:18:05] 2025-11-27 17:17:07,180 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,180 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:18:05] 2025-11-27 17:17:07,180 | INFO     | job 6895651779 has completed (purged errors)
[2025-11-27 12:18:05] 2025-11-27 17:17:07,181 | INFO     | overall cleanup function is called
[2025-11-27 12:18:05] 2025-11-27 17:17:08,199 | INFO     | --- collectZombieJob: --- 10, [141675]
[2025-11-27 12:18:05] 2025-11-27 17:17:08,200 | INFO     | zombie collector waiting for pid 141675
[2025-11-27 12:18:05] 2025-11-27 17:17:08,200 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:18:05] 2025-11-27 17:17:08,200 | INFO     | collected zombie processes
[2025-11-27 12:18:05] 2025-11-27 17:17:08,200 | INFO     | will attempt to kill all subprocesses of pid=141675
[2025-11-27 12:18:05] 2025-11-27 17:17:10,360 | INFO     | process IDs to be killed: [141675] (in reverse order)
[2025-11-27 12:18:05] 2025-11-27 17:17:10,609 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:18:05] 2025-11-27 17:17:10,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:18:05] 2025-11-27 17:17:10,652 | INFO     | did not find any defunct processes belonging to 141675
[2025-11-27 12:18:05] 2025-11-27 17:17:10,699 | INFO     | did not find any defunct processes belonging to 141675
[2025-11-27 12:18:05] 2025-11-27 17:17:10,703 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:18:05] 2025-11-27 17:17:10,703 | INFO     | ready for new job
[2025-11-27 12:18:05] 2025-11-27 17:17:10,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:18:05] 2025-11-27 17:17:10,720 | INFO     | ***************************************
[2025-11-27 12:18:05] 2025-11-27 17:17:10,721 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:18:05] 2025-11-27 17:17:10,721 | INFO     | ***************************************
[2025-11-27 12:18:05] 2025-11-27 17:17:10,721 | INFO     | 
[2025-11-27 12:18:05] 2025-11-27 17:17:10,734 | INFO     | architecture information:
[2025-11-27 12:18:05] 2025-11-27 17:17:10,747 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:18:05] 2025-11-27 17:17:10,771 | INFO     | cat /etc/os-release:
[2025-11-27 12:18:05] NAME="CentOS Linux"
[2025-11-27 12:18:05] VERSION="7 (Core)"
[2025-11-27 12:18:05] ID="centos"
[2025-11-27 12:18:05] ID_LIKE="rhel fedora"
[2025-11-27 12:18:05] VERSION_ID="7"
[2025-11-27 12:18:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:18:05] ANSI_COLOR="0;31"
[2025-11-27 12:18:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:18:05] HOME_URL="https://www.centos.org/"
[2025-11-27 12:18:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:18:05] 
[2025-11-27 12:18:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:18:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:18:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:18:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:18:05] 
[2025-11-27 12:18:05] 2025-11-27 17:17:10,772 | INFO     | ***************************************
[2025-11-27 12:18:05] 2025-11-27 17:17:11,275 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 12:18:05] 2025-11-27 17:17:11,300 | INFO     | sufficient remaining disk space (87390420992 B)
[2025-11-27 12:18:05] 2025-11-27 17:17:11,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:18:05] 2025-11-27 17:17:11,301 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:18:05] 2025-11-27 17:17:11,301 | INFO     | update_server=False
[2025-11-27 12:18:05] 2025-11-27 17:17:11,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:18:05] 2025-11-27 17:17:11,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:18:05] 2025-11-27 17:17:11,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:18:05] 2025-11-27 17:17:11,672 | INFO     | all payload control threads have been joined
[2025-11-27 12:18:05] 2025-11-27 17:17:11,772 | INFO     | all job control threads have been joined
[2025-11-27 12:18:05] 2025-11-27 17:17:11,949 | INFO     | all data control threads have been joined
[2025-11-27 12:18:05] 2025-11-27 17:17:12,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:18:05] 2025-11-27 17:17:12,096 | INFO     | aborting loop
[2025-11-27 12:18:05] 2025-11-27 17:17:12,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:18:05] 2025-11-27 17:17:12,309 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:12,391 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:12,632 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:12,638 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:12,678 | INFO     | [payload] control thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:12,730 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:12,732 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:12,778 | INFO     | [job] control thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:12,927 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:12,955 | INFO     | [data] control thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:13,101 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:13,174 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:13,310 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:13,434 | INFO     | [job] validate thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:13,615 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:15,316 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:18:05] 2025-11-27 17:17:37,290 | INFO     | 64025s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 12:18:05] 2025-11-27 17:17:39,823 | INFO     | PID=93373 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 12:18:05] 2025-11-27 17:17:39,823 | INFO     | .. there are 95 such processes running
[2025-11-27 12:18:05] 2025-11-27 17:17:39,823 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:18:05] 2025-11-27 17:17:39,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:18:05] 2025-11-27 17:17:39,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:18:05] 2025-11-27 17:17:58,025 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:18:05] 2025-11-27 17:17:59,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139864171026240)>', '<ExcThread(monitor, started 139863814805248)>']
[2025-11-27 12:18:05] 2025-11-27 17:17:59,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:18:05] 2025-11-27 17:17:59,940 | INFO     | [monitor] control thread has ended
[2025-11-27 12:18:05] 2025-11-27 17:18:04,172 | INFO     | all workflow threads have been joined
[2025-11-27 12:18:05] 2025-11-27 17:18:04,173 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:18:05] 2025-11-27 17:18:04,173 | INFO     | traces error code: 0
[2025-11-27 12:18:05] 2025-11-27 17:18:04,173 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:18:05] 2025-11-27 17:18:04,709 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:18:05] 2025-11-27 17:18:04,712 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:18:05] 2025-11-27 17:18:04,714 [wrapper] pilotpid: 93373
[2025-11-27 12:18:05] 2025-11-27 17:18:04,716 [wrapper] Pilot exit status: 0
[2025-11-27 12:18:05] 2025-11-27 17:18:04,724 [wrapper] pandaids: 6895651779 6895651779 6895651779
[2025-11-27 12:18:05] 2025-11-27 17:18:04,891 [wrapper] cleanup supervisor_pilot  528076 93374
[2025-11-27 12:18:05] 2025-11-27 17:18:04,894 [wrapper] Test setup, not cleaning
[2025-11-27 12:18:05] 2025-11-27 17:18:04,896 [wrapper] apfmon messages muted
[2025-11-27 12:18:05] 2025-11-27 17:18:04,898 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:18:05] 2025-11-27 17:18:04,910 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:18:05]  *** Error codes and diagnostics ***
[2025-11-27 12:18:05]     "exeErrorCode": 0,
[2025-11-27 12:18:05]     "exeErrorDiag": "",
[2025-11-27 12:18:05]     "pilotErrorCode": 0,
[2025-11-27 12:18:05]     "pilotErrorDiag": "",
[2025-11-27 12:18:05]  *** Listing of results directory ***
[2025-11-27 12:18:05] total 1719848
[2025-11-27 12:18:05] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 07:18 pilot3.tar.gz
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 07:41 queuedata.json
[2025-11-27 12:18:05] -rwx------. 1 boincer umatlas     36292 Nov 24 07:44 runpilot2-wrapper.sh
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas       100 Nov 26 08:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:18:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 08:41 run_atlas
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas       105 Nov 26 08:41 job.xml
[2025-11-27 12:18:05] -rw-r--r--. 3 boincer umatlas 408835570 Nov 26 08:41 EVNT.47483658._001339.pool.root.1
[2025-11-27 12:18:05] -rw-r--r--. 3 boincer umatlas 408835570 Nov 26 08:41 ATLAS.root_0
[2025-11-27 12:18:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:41 start_atlas.sh
[2025-11-27 12:18:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 08:41 shared
[2025-11-27 12:18:05] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 08:41 input.tar.gz
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas         0 Nov 26 08:41 boinc_lockfile
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 18:29 pandaJob.out
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas        57 Nov 26 18:29 setup.sh.local
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas    991538 Nov 26 18:30 agis_schedconf.cvmfs.json
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas       533 Nov 27 12:09 boinc_task_state.xml
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 12:13 init_data.xml
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas 918604866 Nov 27 12:16 HITS.47556149._003253.pool.root.1
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas      1075 Nov 27 12:16 memory_monitor_summary.json
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas   1516240 Nov 27 12:16 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas   2386456 Nov 27 12:16 log.47556149._003253.job.log.tgz.1
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas        96 Nov 27 12:17 pilot_heartbeat.json
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas      8636 Nov 27 12:17 heartbeat.json
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas        29 Nov 27 12:18 wrapper_checkpoint.txt
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas      4938 Nov 27 12:18 pilotlog.txt
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas   8070408 Nov 27 12:18 log.47556149._003253.job.log.1
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas       353 Nov 27 12:18 output.list
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:18 boinc_mmap_file
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas       620 Nov 27 12:18 runtime_log
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas  10475520 Nov 27 12:18 result.tar.gz
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas      9425 Nov 27 12:18 runtime_log.err
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas       916 Nov 27 12:18 b6HODmO6kh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLgLKDmmPuWJn.diag
[2025-11-27 12:18:05] -rw-r--r--. 1 boincer umatlas     26298 Nov 27 12:18 stderr.txt
[2025-11-27 12:18:05] HITS file was successfully produced:
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas 918604866 Nov 27 12:16 shared/HITS.pool.root.1
[2025-11-27 12:18:05]  *** Contents of shared directory: ***
[2025-11-27 12:18:05] total 1307168
[2025-11-27 12:18:05] -rw-r--r--. 3 boincer umatlas 408835570 Nov 26 08:41 ATLAS.root_0
[2025-11-27 12:18:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 08:41 start_atlas.sh
[2025-11-27 12:18:05] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 08:41 input.tar.gz
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas 918604866 Nov 27 12:16 HITS.pool.root.1
[2025-11-27 12:18:05] -rw-------. 1 boincer umatlas  10475520 Nov 27 12:18 result.tar.gz
12:18:06 (66949): run_atlas exited; CPU time 196122.014819
12:18:06 (66949): called boinc_finish(0)

</stderr_txt>
]]>

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