Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:56:08 (613840): wrapper (7.7.26015): starting
07:56:08 (613840): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 07:56:08] Arguments: --nthreads 8
[2025-11-26 07:56:08] Threads: 8
[2025-11-26 07:56:08] Checking for CVMFS
[2025-11-26 07:56:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 07:56:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 07:56:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 07:56:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 07:56:09] 2.13.3.0 11285 30032 343900 153322 0 543 28363989 32935936 48852 16776704 0 213602836 99.605 224725456 38158 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 07:56:09] CVMFS is ok
[2025-11-26 07:56:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 07:56:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 07:56:09] Further information can be found at the LHC@home message board.
[2025-11-26 07:56:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 07:56:09] Checking for apptainer binary...
[2025-11-26 07:56:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 07:56:09] Running /usr/bin/apptainer --version
[2025-11-26 07:56:09] apptainer version 1.4.4-1.el9
[2025-11-26 07:56:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 07:56:09] c7-3-29.aglt2.org
[2025-11-26 07:56:09] apptainer works
[2025-11-26 07:56:09] Set ATHENA_PROC_NUMBER=8
[2025-11-26 07:56:09] Set ATHENA_CORE_NUMBER=8
[2025-11-26 07:56:10] Starting ATLAS job with PandaID=6896255423
[2025-11-26 07:56:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:43:18]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:43:18] 2025-11-27 04:42:13,950 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:43:18] 2025-11-27 04:42:13,950 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:43:18] 2025-11-27 04:42:13,968 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:43:18] 2025-11-27 04:42:13,969 | INFO     | sum of square deviations: 248609100068.39175
[2025-11-26 23:43:18] 2025-11-27 04:42:13,986 | INFO     | sum of deviations: 1213690134076.0376
[2025-11-26 23:43:18] 2025-11-27 04:42:13,987 | INFO     | mean x: 1764190161.6533906
[2025-11-26 23:43:18] 2025-11-27 04:42:13,987 | INFO     | mean y: 2880325.5435952637
[2025-11-26 23:43:18] 2025-11-27 04:42:13,987 | INFO     | intersect: -8609757720.46396
[2025-11-26 23:43:18] 2025-11-27 04:42:13,988 | INFO     | chi2: 12.134777244740597
[2025-11-26 23:43:18] 2025-11-27 04:42:13,989 | INFO     | sum of square deviations: 244616633596.2454
[2025-11-26 23:43:18] 2025-11-27 04:42:14,005 | INFO     | sum of deviations: 1533085685150.002
[2025-11-26 23:43:18] 2025-11-27 04:42:14,006 | INFO     | mean x: 1764190009.1569264
[2025-11-26 23:43:18] 2025-11-27 04:42:14,006 | INFO     | mean y: 2892528.7034632033
[2025-11-26 23:43:18] 2025-11-27 04:42:14,006 | INFO     | intersect: -11053814487.334257
[2025-11-26 23:43:18] 2025-11-27 04:42:14,007 | INFO     | chi2: 8.781305366653706
[2025-11-26 23:43:18] 2025-11-27 04:42:14,007 | INFO     | current chi2=8.781305366653706 (change=27.63521579714484 %)
[2025-11-26 23:43:18] 2025-11-27 04:42:14,008 | INFO     | sum of square deviations: 240667144674.07632
[2025-11-26 23:43:18] 2025-11-27 04:42:14,025 | INFO     | sum of deviations: 1877018385500.7234
[2025-11-26 23:43:18] 2025-11-27 04:42:14,026 | INFO     | mean x: 1764189856.6605005
[2025-11-26 23:43:18] 2025-11-27 04:42:14,026 | INFO     | mean y: 2905807.7747551687
[2025-11-26 23:43:18] 2025-11-27 04:42:14,026 | INFO     | intersect: -13756416433.53132
[2025-11-26 23:43:18] 2025-11-27 04:42:14,027 | INFO     | chi2: 5.067388078289941
[2025-11-26 23:43:18] 2025-11-27 04:42:14,027 | INFO     | current chi2=5.067388078289941 (change=42.29345334541109 %)
[2025-11-26 23:43:18] 2025-11-27 04:42:14,028 | INFO     | sum of square deviations: 236760344802.70996
[2025-11-26 23:43:18] 2025-11-27 04:42:14,043 | INFO     | sum of deviations: 2005712596074.888
[2025-11-26 23:43:18] 2025-11-27 04:42:14,044 | INFO     | mean x: 1764189704.1630197
[2025-11-26 23:43:18] 2025-11-27 04:42:14,044 | INFO     | mean y: 2910825.967177243
[2025-11-26 23:43:18] 2025-11-27 04:42:14,044 | INFO     | intersect: -14942402395.526735
[2025-11-26 23:43:18] 2025-11-27 04:42:14,044 | INFO     | chi2: 4.352468102204156
[2025-11-26 23:43:18] 2025-11-27 04:42:14,045 | INFO     | current chi2=4.352468102204156 (change=14.108253898072165 %)
[2025-11-26 23:43:18] 2025-11-27 04:42:14,045 | INFO     | right removable region: 913
[2025-11-26 23:43:18] 2025-11-27 04:42:14,046 | INFO     | sum of square deviations: 244616263326.24567
[2025-11-26 23:43:18] 2025-11-27 04:42:14,063 | INFO     | sum of deviations: 864558712907.5093
[2025-11-26 23:43:18] 2025-11-27 04:42:14,064 | INFO     | mean x: 1764190314.1569264
[2025-11-26 23:43:18] 2025-11-27 04:42:14,064 | INFO     | mean y: 2893656.686147186
[2025-11-26 23:43:18] 2025-11-27 04:42:14,064 | INFO     | intersect: -6232366773.636019
[2025-11-26 23:43:18] 2025-11-27 04:42:14,065 | INFO     | chi2: 8.545762704174551
[2025-11-26 23:43:18] 2025-11-27 04:42:14,065 | INFO     | current chi2=8.545762704174551 (change=29.57627048425286 %)
[2025-11-26 23:43:18] 2025-11-27 04:42:14,066 | INFO     | sum of square deviations: 240666573227.02927
[2025-11-26 23:43:18] 2025-11-27 04:42:14,083 | INFO     | sum of deviations: 766342753906.691
[2025-11-26 23:43:18] 2025-11-27 04:42:14,083 | INFO     | mean x: 1764190466.657236
[2025-11-26 23:43:18] 2025-11-27 04:42:14,083 | INFO     | mean y: 2897443.2720348206
[2025-11-26 23:43:18] 2025-11-27 04:42:14,083 | INFO     | intersect: -5614727649.011435
[2025-11-26 23:43:18] 2025-11-27 04:42:14,084 | INFO     | chi2: 8.225290044196292
[2025-11-26 23:43:18] 2025-11-27 04:42:14,084 | INFO     | current chi2=8.225290044196292 (change=3.750076746475892 %)
[2025-11-26 23:43:18] 2025-11-27 04:42:14,086 | INFO     | left removable region: 20
[2025-11-26 23:43:18] 2025-11-27 04:42:14,087 | INFO     | sum of square deviations: 220812731438.8872
[2025-11-26 23:43:18] 2025-11-27 04:42:14,104 | INFO     | sum of deviations: 1479809685965.175
[2025-11-26 23:43:18] 2025-11-27 04:42:14,104 | INFO     | mean x: 1764190283.6651735
[2025-11-26 23:43:18] 2025-11-27 04:42:14,104 | INFO     | mean y: 2933051.6326987683
[2025-11-26 23:43:18] 2025-11-27 04:42:14,104 | INFO     | intersect: -11820053116.970127
[2025-11-26 23:43:18] 2025-11-27 04:42:14,105 | INFO     | chi2: 0.24940063836392545
[2025-11-26 23:43:18] 2025-11-27 04:42:14,105 | INFO     | current memory leak: 6.70 B/s (using 893 data points, chi2=0.25)
[2025-11-26 23:43:18] 2025-11-27 04:42:14,106 | INFO     | could have reported an average CPU frequency of 3206 MHz (35 samples)
[2025-11-26 23:43:18] 2025-11-27 04:42:14,106 | INFO     | ..............................
[2025-11-26 23:43:18] 2025-11-27 04:42:14,107 | INFO     | . Timing measurements:
[2025-11-26 23:43:18] 2025-11-27 04:42:14,107 | INFO     | . get job = 0 s
[2025-11-26 23:43:18] 2025-11-27 04:42:14,107 | INFO     | . initial setup = 2 s
[2025-11-26 23:43:18] 2025-11-27 04:42:14,107 | INFO     | . payload setup = 18 s
[2025-11-26 23:43:18] 2025-11-27 04:42:14,107 | INFO     | . stage-in = 0 s
[2025-11-26 23:43:18] 2025-11-27 04:42:14,107 | INFO     | . payload execution = 56670 s
[2025-11-26 23:43:18] 2025-11-27 04:42:14,107 | INFO     | . stage-out = 4 s
[2025-11-26 23:43:18] 2025-11-27 04:42:14,107 | INFO     | . log creation = 0 s
[2025-11-26 23:43:18] 2025-11-27 04:42:14,107 | INFO     | ..............................
[2025-11-26 23:43:18] 2025-11-27 04:42:14,327 | INFO     | 
[2025-11-26 23:43:18] 2025-11-27 04:42:14,328 | INFO     | job summary report
[2025-11-26 23:43:18] 2025-11-27 04:42:14,328 | INFO     | --------------------------------------------------
[2025-11-26 23:43:18] 2025-11-27 04:42:14,328 | INFO     | PanDA job id: 6896255423
[2025-11-26 23:43:18] 2025-11-27 04:42:14,328 | INFO     | task id: 47556161
[2025-11-26 23:43:18] 2025-11-27 04:42:14,328 | INFO     | errors: (none)
[2025-11-26 23:43:18] 2025-11-27 04:42:14,328 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:43:18] 2025-11-27 04:42:14,328 | INFO     | pilot state: finished 
[2025-11-26 23:43:18] 2025-11-27 04:42:14,328 | INFO     | transexitcode: 0
[2025-11-26 23:43:18] 2025-11-27 04:42:14,328 | INFO     | exeerrorcode: 0
[2025-11-26 23:43:18] 2025-11-27 04:42:14,328 | INFO     | exeerrordiag: 
[2025-11-26 23:43:18] 2025-11-27 04:42:14,342 | INFO     | exitcode: 0
[2025-11-26 23:43:18] 2025-11-27 04:42:14,342 | INFO     | exitmsg: OK
[2025-11-26 23:43:18] 2025-11-27 04:42:14,342 | INFO     | cpuconsumptiontime: 206775 s
[2025-11-26 23:43:18] 2025-11-27 04:42:14,342 | INFO     | nevents: 1000
[2025-11-26 23:43:18] 2025-11-27 04:42:14,342 | INFO     | neventsw: 0
[2025-11-26 23:43:18] 2025-11-27 04:42:14,342 | INFO     | pid: 624691
[2025-11-26 23:43:18] 2025-11-27 04:42:14,342 | INFO     | pgrp: 624691
[2025-11-26 23:43:18] 2025-11-27 04:42:14,343 | INFO     | corecount: 8
[2025-11-26 23:43:18] 2025-11-27 04:42:14,343 | INFO     | event service: False
[2025-11-26 23:43:18] 2025-11-27 04:42:14,343 | INFO     | sizes: {0: 2284313, 11: 2284313, 13: 2284603, 22: 2284659, 56689: 2337152, 56694: 2346330, 56707: 2346520}
[2025-11-26 23:43:18] 2025-11-27 04:42:14,343 | INFO     | --------------------------------------------------
[2025-11-26 23:43:18] 2025-11-27 04:42:14,343 | INFO     | 
[2025-11-26 23:43:18] 2025-11-27 04:42:14,343 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-26 23:43:18] 2025-11-27 04:42:14,402 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,402 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,402 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,403 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:43:18] 2025-11-27 04:42:14,404 | INFO     | job 6896255423 has completed (purged errors)
[2025-11-26 23:43:18] 2025-11-27 04:42:14,404 | INFO     | overall cleanup function is called
[2025-11-26 23:43:18] 2025-11-27 04:42:15,426 | INFO     | --- collectZombieJob: --- 10, [624691]
[2025-11-26 23:43:18] 2025-11-27 04:42:15,426 | INFO     | zombie collector waiting for pid 624691
[2025-11-26 23:43:18] 2025-11-27 04:42:15,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:43:18] 2025-11-27 04:42:15,426 | INFO     | collected zombie processes
[2025-11-26 23:43:18] 2025-11-27 04:42:15,426 | INFO     | will attempt to kill all subprocesses of pid=624691
[2025-11-26 23:43:18] 2025-11-27 04:42:16,263 | INFO     | process IDs to be killed: [624691] (in reverse order)
[2025-11-26 23:43:18] 2025-11-27 04:42:16,576 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:43:18] 2025-11-27 04:42:16,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:43:18] 2025-11-27 04:42:16,663 | INFO     | did not find any defunct processes belonging to 624691
[2025-11-26 23:43:18] 2025-11-27 04:42:16,694 | INFO     | did not find any defunct processes belonging to 624691
[2025-11-26 23:43:18] 2025-11-27 04:42:16,696 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:43:18] 2025-11-27 04:42:16,696 | INFO     | ready for new job
[2025-11-26 23:43:18] 2025-11-27 04:42:16,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:43:18] 2025-11-27 04:42:16,700 | INFO     | ***************************************
[2025-11-26 23:43:18] 2025-11-27 04:42:16,700 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:43:18] 2025-11-27 04:42:16,700 | INFO     | ***************************************
[2025-11-26 23:43:18] 2025-11-27 04:42:16,700 | INFO     | 
[2025-11-26 23:43:18] 2025-11-27 04:42:16,706 | INFO     | architecture information:
[2025-11-26 23:43:18] 2025-11-27 04:42:16,713 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:43:18] 2025-11-27 04:42:16,731 | INFO     | cat /etc/os-release:
[2025-11-26 23:43:18] NAME="CentOS Linux"
[2025-11-26 23:43:18] VERSION="7 (Core)"
[2025-11-26 23:43:18] ID="centos"
[2025-11-26 23:43:18] ID_LIKE="rhel fedora"
[2025-11-26 23:43:18] VERSION_ID="7"
[2025-11-26 23:43:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:43:18] ANSI_COLOR="0;31"
[2025-11-26 23:43:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:43:18] HOME_URL="https://www.centos.org/"
[2025-11-26 23:43:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:43:18] 
[2025-11-26 23:43:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:43:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:43:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:43:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:43:18] 
[2025-11-26 23:43:18] 2025-11-27 04:42:16,731 | INFO     | ***************************************
[2025-11-26 23:43:18] 2025-11-27 04:42:17,235 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-26 23:43:18] 2025-11-27 04:42:17,308 | INFO     | sufficient remaining disk space (62969085952 B)
[2025-11-26 23:43:18] 2025-11-27 04:42:17,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:43:18] 2025-11-27 04:42:17,308 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:43:18] 2025-11-27 04:42:17,308 | INFO     | update_server=False
[2025-11-26 23:43:18] 2025-11-27 04:42:17,308 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:43:18] 2025-11-27 04:42:17,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:43:18] 2025-11-27 04:42:17,309 | INFO     | aborting loop
[2025-11-26 23:43:18] 2025-11-27 04:42:17,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:43:18] 2025-11-27 04:42:17,675 | INFO     | all data control threads have been joined
[2025-11-26 23:43:18] 2025-11-27 04:42:18,075 | INFO     | all payload control threads have been joined
[2025-11-26 23:43:18] 2025-11-27 04:42:18,313 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:18,317 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:18,453 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:18,508 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:18,509 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:18,688 | INFO     | [data] control thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:18,718 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:18,943 | INFO     | all job control threads have been joined
[2025-11-26 23:43:18] 2025-11-27 04:42:19,016 | INFO     | [job] validate thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:19,080 | INFO     | [payload] control thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:19,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:43:18] 2025-11-27 04:42:19,318 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:19,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:19,566 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:19,655 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:19,949 | INFO     | [job] control thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:20,214 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:20,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:43:18] 2025-11-27 04:42:24,769 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:43:18] 2025-11-27 04:42:47,849 | INFO     | PID=617599 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 23:43:18] 2025-11-27 04:42:47,853 | INFO     | .. there are 77 such processes running
[2025-11-26 23:43:18] 2025-11-27 04:42:47,854 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:43:18] 2025-11-27 04:42:47,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:43:18] 2025-11-27 04:42:47,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:43:18] 2025-11-27 04:43:11,631 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:43:18] 2025-11-27 04:43:11,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895788287808)>', '<ExcThread(monitor, started 139895439865600)>']
[2025-11-26 23:43:18] 2025-11-27 04:43:12,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:43:18] 2025-11-27 04:43:12,006 | INFO     | [monitor] control thread has ended
[2025-11-26 23:43:18] 2025-11-27 04:43:16,996 | INFO     | all workflow threads have been joined
[2025-11-26 23:43:18] 2025-11-27 04:43:16,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:43:18] 2025-11-27 04:43:17,003 | INFO     | traces error code: 0
[2025-11-26 23:43:18] 2025-11-27 04:43:17,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:43:18] 2025-11-27 04:43:17,268 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:43:18] 2025-11-27 04:43:17,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:43:18] 2025-11-27 04:43:17,362 [wrapper] pilotpid: 617599
[2025-11-26 23:43:18] 2025-11-27 04:43:17,391 [wrapper] Pilot exit status: 0
[2025-11-26 23:43:18] 2025-11-27 04:43:17,459 [wrapper] pandaids: 6896255423
[2025-11-26 23:43:18] 2025-11-27 04:43:17,731 [wrapper] cleanup supervisor_pilot 3176682 617600
[2025-11-26 23:43:18] 2025-11-27 04:43:17,736 [wrapper] Test setup, not cleaning
[2025-11-26 23:43:18] 2025-11-27 04:43:17,751 [wrapper] apfmon messages muted
[2025-11-26 23:43:18] 2025-11-27 04:43:17,757 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:43:18] 2025-11-27 04:43:17,772 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:43:18]  *** Error codes and diagnostics ***
[2025-11-26 23:43:18]     "exeErrorCode": 0,
[2025-11-26 23:43:18]     "exeErrorDiag": "",
[2025-11-26 23:43:18]     "pilotErrorCode": 0,
[2025-11-26 23:43:18]     "pilotErrorDiag": "",
[2025-11-26 23:43:18]  *** Listing of results directory ***
[2025-11-26 23:43:18] total 1322328
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 17:04 pilot3.tar.gz
[2025-11-26 23:43:18] -rwx------. 1 boincer umatlas     36292 Nov 24 17:57 runpilot2-wrapper.sh
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 17:57 queuedata.json
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas       100 Nov 26 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:43:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 07:56 run_atlas
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas       105 Nov 26 07:56 job.xml
[2025-11-26 23:43:18] -rw-r--r--. 2 boincer umatlas 410081328 Nov 26 07:56 EVNT.47483658._002068.pool.root.1
[2025-11-26 23:43:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 07:56 start_atlas.sh
[2025-11-26 23:43:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 07:56 shared
[2025-11-26 23:43:18] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 07:56 input.tar.gz
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas         0 Nov 26 07:56 boinc_lockfile
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 07:56 pandaJob.out
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas        57 Nov 26 07:56 setup.sh.local
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas    991830 Nov 26 07:56 agis_schedconf.cvmfs.json
[2025-11-26 23:43:18] drwx------. 5 boincer umatlas      4096 Nov 26 07:56 pilot3
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas       533 Nov 26 23:21 boinc_task_state.xml
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas      6946 Nov 26 23:40 init_data.xml
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas 920826167 Nov 26 23:41 HITS.47556161._000515.pool.root.1
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas      1071 Nov 26 23:41 memory_monitor_summary.json
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas   1516240 Nov 26 23:41 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas   2117137 Nov 26 23:42 log.47556161._000515.job.log.tgz.1
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas      8629 Nov 26 23:42 heartbeat.json
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas        95 Nov 26 23:42 pilot_heartbeat.json
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas        29 Nov 26 23:43 wrapper_checkpoint.txt
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 23:43 boinc_mmap_file
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas      4823 Nov 26 23:43 pilotlog.txt
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas   7496296 Nov 26 23:43 log.47556161._000515.job.log.1
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas       353 Nov 26 23:43 output.list
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas       620 Nov 26 23:43 runtime_log
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas   9635840 Nov 26 23:43 result.tar.gz
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 23:43 runtime_log.err
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas       664 Nov 26 23:43 EMpMDmnfuh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9yLKDmD3TiEo.diag
[2025-11-26 23:43:18] -rw-r--r--. 1 boincer umatlas     21104 Nov 26 23:43 stderr.txt
[2025-11-26 23:43:18] HITS file was successfully produced:
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas 920826167 Nov 26 23:41 shared/HITS.pool.root.1
[2025-11-26 23:43:18]  *** Contents of shared directory: ***
[2025-11-26 23:43:18] total 1309736
[2025-11-26 23:43:18] -rw-r--r--. 2 boincer umatlas 410081328 Nov 26 07:56 ATLAS.root_0
[2025-11-26 23:43:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 07:56 start_atlas.sh
[2025-11-26 23:43:18] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 07:56 input.tar.gz
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas 920826167 Nov 26 23:41 HITS.pool.root.1
[2025-11-26 23:43:18] -rw-------. 1 boincer umatlas   9635840 Nov 26 23:43 result.tar.gz
23:43:19 (613840): run_atlas exited; CPU time 208412.600421
23:43:19 (613840): called boinc_finish(0)

</stderr_txt>
]]>

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