Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:56:24 (15569): wrapper (7.7.26015): starting
06:56:24 (15569): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 06:56:24] Arguments: --nthreads 8
[2025-11-26 06:56:24] Threads: 8
[2025-11-26 06:56:24] Checking for CVMFS
[2025-11-26 06:56:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 06:56:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 06:56:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 06:56:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 06:56:25] 2.11.2.0 6956 117625 138424 153320 3 90 13135914 18432000 976 130560 0 86492136 99.973 5016272 30963 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 06:56:25] CVMFS is ok
[2025-11-26 06:56:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 06:56:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 06:56:25] Further information can be found at the LHC@home message board.
[2025-11-26 06:56:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 06:56:25] Checking for apptainer binary...
[2025-11-26 06:56:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 06:56:25] Running /usr/bin/apptainer --version
[2025-11-26 06:56:25] apptainer version 1.3.2-1.el7
[2025-11-26 06:56:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 06:56:25] c-206-16.aglt2.org
[2025-11-26 06:56:25] apptainer works
[2025-11-26 06:56:25] Set ATHENA_PROC_NUMBER=8
[2025-11-26 06:56:25] Set ATHENA_CORE_NUMBER=8
[2025-11-26 06:56:25] Starting ATLAS job with PandaID=6895673713
[2025-11-26 06:56:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:19:37]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:19:37] 2025-11-27 07:18:40,045 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 02:19:37] 2025-11-27 07:18:40,050 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1795.6666666666667
[2025-11-27 02:19:37] 2025-11-27 07:18:40,053 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895673713/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:19:37] 2025-11-27 07:18:40,054 | INFO     | extracted standard info from prmon json
[2025-11-27 02:19:37] 2025-11-27 07:18:40,054 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:19:37] 2025-11-27 07:18:40,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:19:37] 2025-11-27 07:18:40,069 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:19:37] 2025-11-27 07:18:40,070 | INFO     | sum of square deviations: 463038407777.5187
[2025-11-27 02:19:37] 2025-11-27 07:18:40,093 | INFO     | sum of deviations: 2385453877064.4014
[2025-11-27 02:19:37] 2025-11-27 07:18:40,093 | INFO     | mean x: 1764193052.6780403
[2025-11-27 02:19:37] 2025-11-27 07:18:40,093 | INFO     | mean y: 2895623.0717410324
[2025-11-27 02:19:37] 2025-11-27 07:18:40,093 | INFO     | intersect: -9085769780.73418
[2025-11-27 02:19:37] 2025-11-27 07:18:40,094 | INFO     | chi2: 5.667917624720782
[2025-11-27 02:19:37] 2025-11-27 07:18:40,095 | INFO     | sum of square deviations: 456988567922.70984
[2025-11-27 02:19:37] 2025-11-27 07:18:40,118 | INFO     | sum of deviations: 2768156125188.2153
[2025-11-27 02:19:37] 2025-11-27 07:18:40,118 | INFO     | mean x: 1764192900.1810193
[2025-11-27 02:19:37] 2025-11-27 07:18:40,118 | INFO     | mean y: 2905265.73198594
[2025-11-27 02:19:37] 2025-11-27 07:18:40,118 | INFO     | intersect: -10683491999.84601
[2025-11-27 02:19:37] 2025-11-27 07:18:40,120 | INFO     | chi2: 2.465628069902144
[2025-11-27 02:19:37] 2025-11-27 07:18:40,120 | INFO     | current chi2=2.465628069902144 (change=56.4985196829919 %)
[2025-11-27 02:19:37] 2025-11-27 07:18:40,121 | INFO     | sum of square deviations: 450991659292.8833
[2025-11-27 02:19:37] 2025-11-27 07:18:40,144 | INFO     | sum of deviations: 2820813904012.668
[2025-11-27 02:19:37] 2025-11-27 07:18:40,144 | INFO     | mean x: 1764192747.6840248
[2025-11-27 02:19:37] 2025-11-27 07:18:40,144 | INFO     | mean y: 2906599.915269197
[2025-11-27 02:19:37] 2025-11-27 07:18:40,144 | INFO     | intersect: -11031575589.462858
[2025-11-27 02:19:37] 2025-11-27 07:18:40,145 | INFO     | chi2: 2.2125214996866838
[2025-11-27 02:19:37] 2025-11-27 07:18:40,145 | INFO     | current chi2=2.2125214996866838 (change=10.265399445485116 %)
[2025-11-27 02:19:37] 2025-11-27 07:18:40,145 | INFO     | right removable region: 1132
[2025-11-27 02:19:37] 2025-11-27 07:18:40,147 | INFO     | sum of square deviations: 456988095172.70966
[2025-11-27 02:19:37] 2025-11-27 07:18:40,172 | INFO     | sum of deviations: 2110623710669.2432
[2025-11-27 02:19:37] 2025-11-27 07:18:40,172 | INFO     | mean x: 1764193205.1810193
[2025-11-27 02:19:37] 2025-11-27 07:18:40,172 | INFO     | mean y: 2902541.1687170477
[2025-11-27 02:19:37] 2025-11-27 07:18:40,173 | INFO     | intersect: -8145117173.982477
[2025-11-27 02:19:37] 2025-11-27 07:18:40,174 | INFO     | chi2: 3.844000901643681
[2025-11-27 02:19:37] 2025-11-27 07:18:40,174 | INFO     | current chi2=3.844000901643681 (change=32.17966180598739 %)
[2025-11-27 02:19:37] 2025-11-27 07:18:40,175 | INFO     | sum of square deviations: 450990852385.6131
[2025-11-27 02:19:37] 2025-11-27 07:18:40,198 | INFO     | sum of deviations: 2019842224495.3965
[2025-11-27 02:19:37] 2025-11-27 07:18:40,198 | INFO     | mean x: 1764193357.6822596
[2025-11-27 02:19:37] 2025-11-27 07:18:40,198 | INFO     | mean y: 2904849.203883495
[2025-11-27 02:19:37] 2025-11-27 07:18:40,198 | INFO     | intersect: -7898346843.977051
[2025-11-27 02:19:37] 2025-11-27 07:18:40,199 | INFO     | chi2: 3.7625691196445143
[2025-11-27 02:19:37] 2025-11-27 07:18:40,199 | INFO     | current chi2=3.7625691196445143 (change=2.1184121461664236 %)
[2025-11-27 02:19:37] 2025-11-27 07:18:40,199 | INFO     | left removable region: 20
[2025-11-27 02:19:37] 2025-11-27 07:18:40,201 | INFO     | sum of square deviations: 426376130060.3417
[2025-11-27 02:19:37] 2025-11-27 07:18:40,222 | INFO     | sum of deviations: 2311052648749.97
[2025-11-27 02:19:37] 2025-11-27 07:18:40,223 | INFO     | mean x: 1764193327.188849
[2025-11-27 02:19:37] 2025-11-27 07:18:40,223 | INFO     | mean y: 2919553.271582734
[2025-11-27 02:19:37] 2025-11-27 07:18:40,223 | INFO     | intersect: -9559397317.35109
[2025-11-27 02:19:37] 2025-11-27 07:18:40,224 | INFO     | chi2: 0.22961270201171693
[2025-11-27 02:19:37] 2025-11-27 07:18:40,224 | INFO     | current memory leak: 5.42 B/s (using 1112 data points, chi2=0.23)
[2025-11-27 02:19:37] 2025-11-27 07:18:40,225 | INFO     | could have reported an average CPU frequency of 2588 MHz (41 samples)
[2025-11-27 02:19:37] 2025-11-27 07:18:40,226 | INFO     | ..............................
[2025-11-27 02:19:37] 2025-11-27 07:18:40,226 | INFO     | . Timing measurements:
[2025-11-27 02:19:37] 2025-11-27 07:18:40,226 | INFO     | . get job = 0 s
[2025-11-27 02:19:37] 2025-11-27 07:18:40,226 | INFO     | . initial setup = 2 s
[2025-11-27 02:19:37] 2025-11-27 07:18:40,226 | INFO     | . payload setup = 5 s
[2025-11-27 02:19:37] 2025-11-27 07:18:40,226 | INFO     | . stage-in = 0 s
[2025-11-27 02:19:37] 2025-11-27 07:18:40,226 | INFO     | . payload execution = 69690 s
[2025-11-27 02:19:37] 2025-11-27 07:18:40,226 | INFO     | . stage-out = 3 s
[2025-11-27 02:19:37] 2025-11-27 07:18:40,227 | INFO     | . log creation = 0 s
[2025-11-27 02:19:37] 2025-11-27 07:18:40,227 | INFO     | ..............................
[2025-11-27 02:19:37] 2025-11-27 07:18:40,309 | INFO     | 
[2025-11-27 02:19:37] 2025-11-27 07:18:40,310 | INFO     | job summary report
[2025-11-27 02:19:37] 2025-11-27 07:18:40,310 | INFO     | --------------------------------------------------
[2025-11-27 02:19:37] 2025-11-27 07:18:40,310 | INFO     | PanDA job id: 6895673713
[2025-11-27 02:19:37] 2025-11-27 07:18:40,310 | INFO     | task id: 47556161
[2025-11-27 02:19:37] 2025-11-27 07:18:40,310 | INFO     | errors: (none)
[2025-11-27 02:19:37] 2025-11-27 07:18:40,310 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:19:37] 2025-11-27 07:18:40,310 | INFO     | pilot state: finished 
[2025-11-27 02:19:37] 2025-11-27 07:18:40,310 | INFO     | transexitcode: 0
[2025-11-27 02:19:37] 2025-11-27 07:18:40,311 | INFO     | exeerrorcode: 0
[2025-11-27 02:19:37] 2025-11-27 07:18:40,311 | INFO     | exeerrordiag: 
[2025-11-27 02:19:37] 2025-11-27 07:18:40,311 | INFO     | exitcode: 0
[2025-11-27 02:19:37] 2025-11-27 07:18:40,311 | INFO     | exitmsg: OK
[2025-11-27 02:19:37] 2025-11-27 07:18:40,311 | INFO     | cpuconsumptiontime: 537243 s
[2025-11-27 02:19:37] 2025-11-27 07:18:40,311 | INFO     | nevents: 1000
[2025-11-27 02:19:37] 2025-11-27 07:18:40,311 | INFO     | neventsw: 0
[2025-11-27 02:19:37] 2025-11-27 07:18:40,312 | INFO     | pid: 6176
[2025-11-27 02:19:37] 2025-11-27 07:18:40,312 | INFO     | pgrp: 6176
[2025-11-27 02:19:37] 2025-11-27 07:18:40,312 | INFO     | corecount: 8
[2025-11-27 02:19:37] 2025-11-27 07:18:40,312 | INFO     | event service: False
[2025-11-27 02:19:37] 2025-11-27 07:18:40,312 | INFO     | sizes: {0: 2284312, 4: 2284574, 11: 2284602, 69699: 2340910, 69703: 2349904, 69705: 2349960, 69709: 2350430}
[2025-11-27 02:19:37] 2025-11-27 07:18:40,312 | INFO     | --------------------------------------------------
[2025-11-27 02:19:37] 2025-11-27 07:18:40,312 | INFO     | 
[2025-11-27 02:19:37] 2025-11-27 07:18:40,313 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 02:19:37] 2025-11-27 07:18:40,332 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,332 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,332 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,332 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,332 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,332 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,333 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,333 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,333 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,333 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,333 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,333 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,335 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:19:37] 2025-11-27 07:18:40,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:19:37] 2025-11-27 07:18:40,335 | INFO     | job 6895673713 has completed (purged errors)
[2025-11-27 02:19:37] 2025-11-27 07:18:40,335 | INFO     | overall cleanup function is called
[2025-11-27 02:19:37] 2025-11-27 07:18:40,446 | INFO     | PID=21743 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 02:19:37] 2025-11-27 07:18:40,446 | INFO     | .. there are 2 such processes running
[2025-11-27 02:19:37] 2025-11-27 07:18:41,352 | INFO     | --- collectZombieJob: --- 10, [6176]
[2025-11-27 02:19:37] 2025-11-27 07:18:41,353 | INFO     | zombie collector waiting for pid 6176
[2025-11-27 02:19:37] 2025-11-27 07:18:41,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:19:37] 2025-11-27 07:18:41,353 | INFO     | collected zombie processes
[2025-11-27 02:19:37] 2025-11-27 07:18:41,353 | INFO     | will attempt to kill all subprocesses of pid=6176
[2025-11-27 02:19:37] 2025-11-27 07:18:41,450 | INFO     | process IDs to be killed: [6176] (in reverse order)
[2025-11-27 02:19:37] 2025-11-27 07:18:41,496 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:19:37] 2025-11-27 07:18:41,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:19:37] 2025-11-27 07:18:41,499 | INFO     | did not find any defunct processes belonging to 6176
[2025-11-27 02:19:37] 2025-11-27 07:18:41,501 | INFO     | did not find any defunct processes belonging to 6176
[2025-11-27 02:19:37] 2025-11-27 07:18:41,503 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:19:37] 2025-11-27 07:18:41,503 | INFO     | ready for new job
[2025-11-27 02:19:37] 2025-11-27 07:18:41,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:19:37] 2025-11-27 07:18:41,573 | INFO     | ***************************************
[2025-11-27 02:19:37] 2025-11-27 07:18:41,573 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:19:37] 2025-11-27 07:18:41,573 | INFO     | ***************************************
[2025-11-27 02:19:37] 2025-11-27 07:18:41,573 | INFO     | 
[2025-11-27 02:19:37] 2025-11-27 07:18:41,574 | INFO     | architecture information:
[2025-11-27 02:19:37] 2025-11-27 07:18:41,575 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:19:37] 2025-11-27 07:18:41,589 | INFO     | cat /etc/os-release:
[2025-11-27 02:19:37] NAME="CentOS Linux"
[2025-11-27 02:19:37] VERSION="7 (Core)"
[2025-11-27 02:19:37] ID="centos"
[2025-11-27 02:19:37] ID_LIKE="rhel fedora"
[2025-11-27 02:19:37] VERSION_ID="7"
[2025-11-27 02:19:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:19:37] ANSI_COLOR="0;31"
[2025-11-27 02:19:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:19:37] HOME_URL="https://www.centos.org/"
[2025-11-27 02:19:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:19:37] 
[2025-11-27 02:19:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:19:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:19:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:19:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:19:37] 
[2025-11-27 02:19:37] 2025-11-27 07:18:41,589 | INFO     | ***************************************
[2025-11-27 02:19:37] 2025-11-27 07:18:42,091 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 02:19:37] 2025-11-27 07:18:42,106 | INFO     | sufficient remaining disk space (24309137408 B)
[2025-11-27 02:19:37] 2025-11-27 07:18:42,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:19:37] 2025-11-27 07:18:42,107 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:19:37] 2025-11-27 07:18:42,107 | INFO     | update_server=False
[2025-11-27 02:19:37] 2025-11-27 07:18:42,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:19:37] 2025-11-27 07:18:42,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:19:37] 2025-11-27 07:18:42,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:19:37] 2025-11-27 07:18:42,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:19:37] 2025-11-27 07:18:42,697 | INFO     | all data control threads have been joined
[2025-11-27 02:19:37] 2025-11-27 07:18:43,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:19:37] 2025-11-27 07:18:43,026 | INFO     | aborting loop
[2025-11-27 02:19:37] 2025-11-27 07:18:43,062 | INFO     | all job control threads have been joined
[2025-11-27 02:19:37] 2025-11-27 07:18:43,113 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:43,113 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:43,449 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:43,459 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:43,490 | INFO     | [job] validate thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:43,596 | INFO     | all payload control threads have been joined
[2025-11-27 02:19:37] 2025-11-27 07:18:43,703 | INFO     | [data] control thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:43,919 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:43,959 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:44,020 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:44,031 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:44,068 | INFO     | [job] control thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:44,113 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:44,349 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:44,601 | INFO     | [payload] control thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:46,291 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:18:52,402 | INFO     | job.realtimelogging is not enabled
[2025-11-27 02:19:37] 2025-11-27 07:18:53,407 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:19:37] 2025-11-27 07:19:12,655 | INFO     | PID=21743 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 02:19:37] 2025-11-27 07:19:12,655 | INFO     | .. there are 3 such processes running
[2025-11-27 02:19:37] 2025-11-27 07:19:12,656 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:19:37] 2025-11-27 07:19:12,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:19:37] 2025-11-27 07:19:12,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:19:37] 2025-11-27 07:19:30,598 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:19:37] 2025-11-27 07:19:31,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839298619200)>', '<ExcThread(monitor, started 139838464440064)>']
[2025-11-27 02:19:37] 2025-11-27 07:19:32,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:19:37] 2025-11-27 07:19:32,756 | INFO     | [monitor] control thread has ended
[2025-11-27 02:19:37] 2025-11-27 07:19:36,881 | INFO     | all workflow threads have been joined
[2025-11-27 02:19:37] 2025-11-27 07:19:36,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:19:37] 2025-11-27 07:19:36,881 | INFO     | traces error code: 0
[2025-11-27 02:19:37] 2025-11-27 07:19:36,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:19:37] 2025-11-27 07:19:36,977 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:19:37] 2025-11-27 07:19:36,979 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:19:37] 2025-11-27 07:19:36,982 [wrapper] pilotpid: 21743
[2025-11-27 02:19:37] 2025-11-27 07:19:36,985 [wrapper] Pilot exit status: 0
[2025-11-27 02:19:37] 2025-11-27 07:19:36,993 [wrapper] pandaids: 6895673713
[2025-11-27 02:19:37] 2025-11-27 07:19:37,032 [wrapper] cleanup supervisor_pilot  7515 21744
[2025-11-27 02:19:37] 2025-11-27 07:19:37,035 [wrapper] Test setup, not cleaning
[2025-11-27 02:19:37] 2025-11-27 07:19:37,037 [wrapper] apfmon messages muted
[2025-11-27 02:19:37] 2025-11-27 07:19:37,040 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:19:37] 2025-11-27 07:19:37,042 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:19:37]  *** Error codes and diagnostics ***
[2025-11-27 02:19:37]     "exeErrorCode": 0,
[2025-11-27 02:19:37]     "exeErrorDiag": "",
[2025-11-27 02:19:37]     "pilotErrorCode": 0,
[2025-11-27 02:19:37]     "pilotErrorDiag": "",
[2025-11-27 02:19:37]  *** Listing of results directory ***
[2025-11-27 02:19:37] total 1309088
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 08:08 pilot3.tar.gz
[2025-11-27 02:19:37] -rwx------ 1 boincer umatlas     36292 Nov 24 08:20 runpilot2-wrapper.sh
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 08:20 queuedata.json
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas       100 Nov 26 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:19:37] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 06:56 run_atlas
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas       105 Nov 26 06:56 job.xml
[2025-11-27 02:19:37] -rw-r--r-- 2 boincer umatlas 407334636 Nov 26 06:56 EVNT.47483658._002046.pool.root.1
[2025-11-27 02:19:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 06:56 start_atlas.sh
[2025-11-27 02:19:37] drwxrwx--x 2 boincer umatlas      4096 Nov 26 06:56 shared
[2025-11-27 02:19:37] -rw-r--r-- 2 boincer umatlas    590098 Nov 26 06:56 input.tar.gz
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas         0 Nov 26 06:56 boinc_lockfile
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 06:56 pandaJob.out
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas        57 Nov 26 06:56 setup.sh.local
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas    991830 Nov 26 06:56 agis_schedconf.cvmfs.json
[2025-11-27 02:19:37] drwx------ 5 boincer umatlas      4096 Nov 26 06:56 pilot3
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas       533 Nov 27 02:10 boinc_task_state.xml
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas      5953 Nov 27 02:12 init_data.xml
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas 905384399 Nov 27 02:17 HITS.47556161._000293.pool.root.1
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas        95 Nov 27 02:18 pilot_heartbeat.json
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas      1065 Nov 27 02:18 memory_monitor_summary.json
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas   1516240 Nov 27 02:18 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas   2294896 Nov 27 02:18 log.47556161._000293.job.log.tgz.1
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas      8665 Nov 27 02:18 heartbeat.json
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas        29 Nov 27 02:19 wrapper_checkpoint.txt
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 02:19 boinc_mmap_file
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas      4893 Nov 27 02:19 pilotlog.txt
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas   9637858 Nov 27 02:19 log.47556161._000293.job.log.1
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas       353 Nov 27 02:19 output.list
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas       620 Nov 27 02:19 runtime_log
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas  11950080 Nov 27 02:19 result.tar.gz
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 02:19 runtime_log.err
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas       668 Nov 27 02:19 PJSNDmqflh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkhLKDm5PXRem.diag
[2025-11-27 02:19:37] -rw-r--r-- 1 boincer umatlas     21319 Nov 27 02:19 stderr.txt
[2025-11-27 02:19:37] HITS file was successfully produced:
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas 905384399 Nov 27 02:17 shared/HITS.pool.root.1
[2025-11-27 02:19:37]  *** Contents of shared directory: ***
[2025-11-27 02:19:37] total 1294232
[2025-11-27 02:19:37] -rw-r--r-- 2 boincer umatlas 407334636 Nov 26 06:56 ATLAS.root_0
[2025-11-27 02:19:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 06:56 start_atlas.sh
[2025-11-27 02:19:37] -rw-r--r-- 2 boincer umatlas    590098 Nov 26 06:56 input.tar.gz
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas 905384399 Nov 27 02:17 HITS.pool.root.1
[2025-11-27 02:19:37] -rw------- 1 boincer umatlas  11950080 Nov 27 02:19 result.tar.gz
02:19:39 (15569): run_atlas exited; CPU time 535938.625231
02:19:39 (15569): called boinc_finish(0)

</stderr_txt>
]]>

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